Sed0003245 (gene) Chayote v1

Overview
NameSed0003245
Typegene
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein, putative
LocationLG10: 1816557 .. 1818167 (+)
RNA-Seq ExpressionSed0003245
SyntenySed0003245
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGCCAGGTCACGGTTTCGATCGGCTCTCGTCGTCTTCTACCTAAACTCAAACTTCAGCTGTGCAATTAGGGTTTCTTCAATCACAGAGCAGCCATGTCCTCAGTTCCAAATCCCTAAGCAAACACGACGTCTCAACCGTCCGATCAAAATGGGATCATCGTCGTCAACTTTTCCGGTGATTTGCCTTCTCCACTCCGTCGTCGCAATCACCAGCGGAACGCTCATGATGTTCTACATGAAGGAGATTTACACGATCGGCCATGGAAACGACATCGCCACTAAGTTAATGGGCTCTACGCCGCACGATCAGCTCCTGATCCAGACCTCCGATTCGTTTTCCGGCTTGCTCCTCTTCGCAATCGGGTTTCTCCTCTTCATGGTTTCGTTCGTCAAGGACAGGGAATTTCAAGGGTTCTTCGCCAAGGGATGTACGGTGCTTCACGTATCAATGGCGATGTGGAGATTCTATTTCGAGCGAAGAGTGGAGGATTTGGCTTGGGATTGGCTGAGGCAGATTGTTGGTGATATTCTTCTTGCTTTATCTTGGGTGTTTTTTCTTGTTTATTCCTGGAGAGAAAAATATGATTAGTTTCCTCAGTAAATTGTTGTGTCTTTTCTTTTGATTCTTAGTTGCTAATTACATTGTGATTTTCTGGGTCTGGATATCTGTTTAAAATTGGGGAAAGAAAGTGATTTAAATCTATAGGTGAATATGGCTGAAAGGGGGAAACCCCATCCCACTTTTCTTTTGTGTCTGTGTGTGAGTGTGTGTGTTTTTTATCTTCCTTTGTAAATGCTTTTTGTGTTTTTTTTTTATACTTGTTATGTTCTTAATAAGCCAAAATGAAATACATTTCATATTGATGCTTTGTTGTTGAGTTCTGCATTATAGTGAAAGAGAAGAACTGTTGATTGATTGATTGAAGGAATTTAGTGAAGAGAGCTGTAATGGGAGCTGGCAATTGAATCTTTGTAAGCCTTCTATCATGGGATAGGATTAGCTTTAGAGTTCAGTGTTGAAATTCTGTATAATTCTGGTGTTTCTTGAAGTTGAATTTTAGAAGCCATTATCATTTTTGGAAGGCTAAGAAATATATGTTAAGAAGTTGAAATATGGCTTTGTTTTTAAGAGGATTGTTCTGTTCCATATGCTTTCTACTTGTTGTATGAACTTGTGTGTATTCTTTCCTTCTTATGTACTCCCCTATTGTCTAAGCTTTGTTCTTTACTTTGAAAAAGAGAGGGTGACCAAATAGGAAGCATTGCCTTTCTAGTTTTTTCTTCTCTTCAAGCTTAAGTTTTGGTTCAGTACCTTCAATTAAAGGTTTGTTAGTTCCATGTACGTCTATTTTTATCCTCAACTTTGAAAAATAACTATTTTGGTCTAGTGGTCAACCTACTTAGTTGAGTTACCTTGACAACCAAATTTAGTTTACTTTGGTTTCAGTCTACTCCCAACTATCAAATAATTAAAAGATGACAGCACTCTTAACCTAATACTTTACTTTGTTTTAAAGGATTGTCCTGTTGAGTTTTTTTTTTTTTGAAACTAGGATAACACGTTCGTCCCTAGGCCAGGTACTGAGAGACATCGAAGGAGTAAAGCCACAG

mRNA sequence

CGCCAGGTCACGGTTTCGATCGGCTCTCGTCGTCTTCTACCTAAACTCAAACTTCAGCTGTGCAATTAGGGTTTCTTCAATCACAGAGCAGCCATGTCCTCAGTTCCAAATCCCTAAGCAAACACGACGTCTCAACCGTCCGATCAAAATGGGATCATCGTCGTCAACTTTTCCGGTGATTTGCCTTCTCCACTCCGTCGTCGCAATCACCAGCGGAACGCTCATGATGTTCTACATGAAGGAGATTTACACGATCGGCCATGGAAACGACATCGCCACTAAGTTAATGGGCTCTACGCCGCACGATCAGCTCCTGATCCAGACCTCCGATTCGTTTTCCGGCTTGCTCCTCTTCGCAATCGGGTTTCTCCTCTTCATGGTTTCGTTCGTCAAGGACAGGGAATTTCAAGGGTTCTTCGCCAAGGGATGTACGGTGCTTCACGTATCAATGGCGATGTGGAGATTCTATTTCGAGCGAAGAGTGGAGGATTTGGCTTGGGATTGGCTGAGGCAGATTGTTGGTGATATTCTTCTTGCTTTATCTTGGGTGTTTTTTCTTGTTTATTCCTGGAGAGAAAAATATGATTAGTTTCCTCAGTAAATTGTTGTGTCTTTTCTTTTGATTCTTAGTTGCTAATTACATTGTGATTTTCTGGGTCTGGATATCTGTTTAAAATTGGGGAAAGAAAGTGATTTAAATCTATAGGTGAATATGGCTGAAAGGGGGAAACCCCATCCCACTTTTCTTTTGTGTCTGTGTGTGAGTGTGTGTGTTTTTTATCTTCCTTTGTAAATGCTTTTTGTGTTTTTTTTTTATACTTGTTATGTTCTTAATAAGCCAAAATGAAATACATTTCATATTGATGCTTTGTTGTTGAGTTCTGCATTATAGTGAAAGAGAAGAACTGTTGATTGATTGATTGAAGGAATTTAGTGAAGAGAGCTGTAATGGGAGCTGGCAATTGAATCTTTGTAAGCCTTCTATCATGGGATAGGATTAGCTTTAGAGTTCAGTGTTGAAATTCTGTATAATTCTGGTGTTTCTTGAAGTTGAATTTTAGAAGCCATTATCATTTTTGGAAGGCTAAGAAATATATGTTAAGAAGTTGAAATATGGCTTTGTTTTTAAGAGGATTGTTCTGTTCCATATGCTTTCTACTTGTTGTATGAACTTGTGTGTATTCTTTCCTTCTTATGTACTCCCCTATTGTCTAAGCTTTGTTCTTTACTTTGAAAAAGAGAGGGTGACCAAATAGGAAGCATTGCCTTTCTAGTTTTTTCTTCTCTTCAAGCTTAAGTTTTGGTTCAGTACCTTCAATTAAAGGTTTGTTAGTTCCATGTACGTCTATTTTTATCCTCAACTTTGAAAAATAACTATTTTGGTCTAGTGGTCAACCTACTTAGTTGAGTTACCTTGACAACCAAATTTAGTTTACTTTGGTTTCAGTCTACTCCCAACTATCAAATAATTAAAAGATGACAGCACTCTTAACCTAATACTTTACTTTGTTTTAAAGGATTGTCCTGTTGAGTTTTTTTTTTTTTGAAACTAGGATAACACGTTCGTCCCTAGGCCAGGTACTGAGAGACATCGAAGGAGTAAAGCCACAG

Coding sequence (CDS)

ATGGGATCATCGTCGTCAACTTTTCCGGTGATTTGCCTTCTCCACTCCGTCGTCGCAATCACCAGCGGAACGCTCATGATGTTCTACATGAAGGAGATTTACACGATCGGCCATGGAAACGACATCGCCACTAAGTTAATGGGCTCTACGCCGCACGATCAGCTCCTGATCCAGACCTCCGATTCGTTTTCCGGCTTGCTCCTCTTCGCAATCGGGTTTCTCCTCTTCATGGTTTCGTTCGTCAAGGACAGGGAATTTCAAGGGTTCTTCGCCAAGGGATGTACGGTGCTTCACGTATCAATGGCGATGTGGAGATTCTATTTCGAGCGAAGAGTGGAGGATTTGGCTTGGGATTGGCTGAGGCAGATTGTTGGTGATATTCTTCTTGCTTTATCTTGGGTGTTTTTTCTTGTTTATTCCTGGAGAGAAAAATATGATTAG

Protein sequence

MGSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVSMAMWRFYFERRVEDLAWDWLRQIVGDILLALSWVFFLVYSWREKYD
Homology
[Close]
BLAST of Sed0003245 vs. NCBI nr
Match: XP_011658212.1 (uncharacterized protein LOC101204514 [Cucumis sativus])

HSP 1 Score: 290.0 bits (741), Expect = 1.1e-74
Identity = 142/146 (97.26%), Postives = 145/146 (99.32%), Query Frame = 0 

Query: 1   MGSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTS 60
           MGSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHG +IATKLMGSTPHDQLLI+TS
Sbjct: 1   MGSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIEIATKLMGSTPHDQLLIRTS 60

Query: 61  DSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVSMAMWRFYFERRVEDLAWDWL 120
           DSFSGLLLFAIGFLLFMV+FVKDREFQGFFAKGCTVLHVSMAMWRFYFERRVEDLAWDWL
Sbjct: 61  DSFSGLLLFAIGFLLFMVAFVKDREFQGFFAKGCTVLHVSMAMWRFYFERRVEDLAWDWL 120

Query: 121 RQIVGDILLALSWVFFLVYSWREKYD 147
           RQIVGDILLALSWVFFLVYSWREKYD
Sbjct: 121 RQIVGDILLALSWVFFLVYSWREKYD 146

[Close]
BLAST of Sed0003245 vs. NCBI nr
Match: XP_038881843.1 (uncharacterized protein LOC120073208 [Benincasa hispida])

HSP 1 Score: 289.7 bits (740), Expect = 1.4e-74
Identity = 142/146 (97.26%), Postives = 144/146 (98.63%), Query Frame = 0 

Query: 1   MGSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTS 60
           MGSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHG D ATKLMGSTPHDQLLI+TS
Sbjct: 1   MGSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDTATKLMGSTPHDQLLIRTS 60

Query: 61  DSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVSMAMWRFYFERRVEDLAWDWL 120
           DSFSGLLLFAIGFLLFMVSFV+DREFQGFFAKGCTVLHVSMAMWRFYFERRVEDLAWDWL
Sbjct: 61  DSFSGLLLFAIGFLLFMVSFVRDREFQGFFAKGCTVLHVSMAMWRFYFERRVEDLAWDWL 120

Query: 121 RQIVGDILLALSWVFFLVYSWREKYD 147
           RQIVGDILLALSWVFFLVYSWREKYD
Sbjct: 121 RQIVGDILLALSWVFFLVYSWREKYD 146

[Close]
BLAST of Sed0003245 vs. NCBI nr
Match: XP_022926441.1 (uncharacterized protein LOC111433593 [Cucurbita moschata] >XP_023517142.1 uncharacterized protein LOC111780988 [Cucurbita pepo subsp. pepo] >KAG6594602.1 hypothetical protein SDJN03_11155, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026572.1 hypothetical protein SDJN02_10574, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 289.3 bits (739), Expect = 1.9e-74
Identity = 142/144 (98.61%), Postives = 143/144 (99.31%), Query Frame = 0 

Query: 3   SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTSDS 62
           SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHG DIATKLMGSTPHDQLL+QTSDS
Sbjct: 4   SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDIATKLMGSTPHDQLLLQTSDS 63

Query: 63  FSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVSMAMWRFYFERRVEDLAWDWLRQ 122
           FSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVSMAMWRFYFERRVEDLAWDWLRQ
Sbjct: 64  FSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVSMAMWRFYFERRVEDLAWDWLRQ 123

Query: 123 IVGDILLALSWVFFLVYSWREKYD 147
           IVGDILLALSWVFFLVYSWREKYD
Sbjct: 124 IVGDILLALSWVFFLVYSWREKYD 147

[Close]
BLAST of Sed0003245 vs. NCBI nr
Match: XP_008439852.1 (PREDICTED: uncharacterized protein LOC103484518 [Cucumis melo] >KAA0052685.1 uncharacterized protein E6C27_scaffold120G002970 [Cucumis melo var. makuwa] >TYK13139.1 uncharacterized protein E5676_scaffold255G007490 [Cucumis melo var. makuwa])

HSP 1 Score: 286.6 bits (732), Expect = 1.2e-73
Identity = 140/146 (95.89%), Postives = 143/146 (97.95%), Query Frame = 0 

Query: 1   MGSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTS 60
           MGSSSSTFPVIC LHSVVAITSGTLMMFYMKEIYTIGHG + ATKLMGSTPHDQLLI+TS
Sbjct: 1   MGSSSSTFPVICFLHSVVAITSGTLMMFYMKEIYTIGHGIETATKLMGSTPHDQLLIRTS 60

Query: 61  DSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVSMAMWRFYFERRVEDLAWDWL 120
           DSFSGLLLFAIGFLLFMV+FVKDREFQGFFAKGCTVLHVSMAMWRFYFERRVEDLAWDWL
Sbjct: 61  DSFSGLLLFAIGFLLFMVAFVKDREFQGFFAKGCTVLHVSMAMWRFYFERRVEDLAWDWL 120

Query: 121 RQIVGDILLALSWVFFLVYSWREKYD 147
           RQIVGDILLALSWVFFLVYSWREKYD
Sbjct: 121 RQIVGDILLALSWVFFLVYSWREKYD 146

[Close]
BLAST of Sed0003245 vs. NCBI nr
Match: XP_023003187.1 (uncharacterized protein LOC111496876 [Cucurbita maxima])

HSP 1 Score: 285.8 bits (730), Expect = 2.1e-73
Identity = 140/144 (97.22%), Postives = 142/144 (98.61%), Query Frame = 0 

Query: 3   SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTSDS 62
           SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHG DIATKLMGSTPHDQLL+QTSDS
Sbjct: 4   SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDIATKLMGSTPHDQLLLQTSDS 63

Query: 63  FSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVSMAMWRFYFERRVEDLAWDWLRQ 122
           FSGLLLFAIGFLLFMVSFVKDREFQGFFAKGC VLHVSMAMWRFYFERRVEDL+WDWLRQ
Sbjct: 64  FSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCMVLHVSMAMWRFYFERRVEDLSWDWLRQ 123

Query: 123 IVGDILLALSWVFFLVYSWREKYD 147
           IVGDILLALSWVFFLVYSWREKYD
Sbjct: 124 IVGDILLALSWVFFLVYSWREKYD 147

[Close]
BLAST of Sed0003245 vs. ExPASy TrEMBL
Match: A0A0A0KHM7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G517380 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 5.4e-75
Identity = 142/146 (97.26%), Postives = 145/146 (99.32%), Query Frame = 0 

Query: 1   MGSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTS 60
           MGSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHG +IATKLMGSTPHDQLLI+TS
Sbjct: 1   MGSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIEIATKLMGSTPHDQLLIRTS 60

Query: 61  DSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVSMAMWRFYFERRVEDLAWDWL 120
           DSFSGLLLFAIGFLLFMV+FVKDREFQGFFAKGCTVLHVSMAMWRFYFERRVEDLAWDWL
Sbjct: 61  DSFSGLLLFAIGFLLFMVAFVKDREFQGFFAKGCTVLHVSMAMWRFYFERRVEDLAWDWL 120

Query: 121 RQIVGDILLALSWVFFLVYSWREKYD 147
           RQIVGDILLALSWVFFLVYSWREKYD
Sbjct: 121 RQIVGDILLALSWVFFLVYSWREKYD 146

[Close]
BLAST of Sed0003245 vs. ExPASy TrEMBL
Match: A0A6J1EEX8 (uncharacterized protein LOC111433593 OS=Cucurbita moschata OX=3662 GN=LOC111433593 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 9.2e-75
Identity = 142/144 (98.61%), Postives = 143/144 (99.31%), Query Frame = 0 

Query: 3   SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTSDS 62
           SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHG DIATKLMGSTPHDQLL+QTSDS
Sbjct: 4   SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDIATKLMGSTPHDQLLLQTSDS 63

Query: 63  FSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVSMAMWRFYFERRVEDLAWDWLRQ 122
           FSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVSMAMWRFYFERRVEDLAWDWLRQ
Sbjct: 64  FSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVSMAMWRFYFERRVEDLAWDWLRQ 123

Query: 123 IVGDILLALSWVFFLVYSWREKYD 147
           IVGDILLALSWVFFLVYSWREKYD
Sbjct: 124 IVGDILLALSWVFFLVYSWREKYD 147

[Close]
BLAST of Sed0003245 vs. ExPASy TrEMBL
Match: A0A5D3CSC4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007490 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 5.9e-74
Identity = 140/146 (95.89%), Postives = 143/146 (97.95%), Query Frame = 0 

Query: 1   MGSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTS 60
           MGSSSSTFPVIC LHSVVAITSGTLMMFYMKEIYTIGHG + ATKLMGSTPHDQLLI+TS
Sbjct: 1   MGSSSSTFPVICFLHSVVAITSGTLMMFYMKEIYTIGHGIETATKLMGSTPHDQLLIRTS 60

Query: 61  DSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVSMAMWRFYFERRVEDLAWDWL 120
           DSFSGLLLFAIGFLLFMV+FVKDREFQGFFAKGCTVLHVSMAMWRFYFERRVEDLAWDWL
Sbjct: 61  DSFSGLLLFAIGFLLFMVAFVKDREFQGFFAKGCTVLHVSMAMWRFYFERRVEDLAWDWL 120

Query: 121 RQIVGDILLALSWVFFLVYSWREKYD 147
           RQIVGDILLALSWVFFLVYSWREKYD
Sbjct: 121 RQIVGDILLALSWVFFLVYSWREKYD 146

[Close]
BLAST of Sed0003245 vs. ExPASy TrEMBL
Match: A0A1S3AZP8 (uncharacterized protein LOC103484518 OS=Cucumis melo OX=3656 GN=LOC103484518 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 5.9e-74
Identity = 140/146 (95.89%), Postives = 143/146 (97.95%), Query Frame = 0 

Query: 1   MGSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTS 60
           MGSSSSTFPVIC LHSVVAITSGTLMMFYMKEIYTIGHG + ATKLMGSTPHDQLLI+TS
Sbjct: 1   MGSSSSTFPVICFLHSVVAITSGTLMMFYMKEIYTIGHGIETATKLMGSTPHDQLLIRTS 60

Query: 61  DSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVSMAMWRFYFERRVEDLAWDWL 120
           DSFSGLLLFAIGFLLFMV+FVKDREFQGFFAKGCTVLHVSMAMWRFYFERRVEDLAWDWL
Sbjct: 61  DSFSGLLLFAIGFLLFMVAFVKDREFQGFFAKGCTVLHVSMAMWRFYFERRVEDLAWDWL 120

Query: 121 RQIVGDILLALSWVFFLVYSWREKYD 147
           RQIVGDILLALSWVFFLVYSWREKYD
Sbjct: 121 RQIVGDILLALSWVFFLVYSWREKYD 146

[Close]
BLAST of Sed0003245 vs. ExPASy TrEMBL
Match: A0A6J1KLR6 (uncharacterized protein LOC111496876 OS=Cucurbita maxima OX=3661 GN=LOC111496876 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.0e-73
Identity = 140/144 (97.22%), Postives = 142/144 (98.61%), Query Frame = 0 

Query: 3   SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTSDS 62
           SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHG DIATKLMGSTPHDQLL+QTSDS
Sbjct: 4   SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGIDIATKLMGSTPHDQLLLQTSDS 63

Query: 63  FSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVSMAMWRFYFERRVEDLAWDWLRQ 122
           FSGLLLFAIGFLLFMVSFVKDREFQGFFAKGC VLHVSMAMWRFYFERRVEDL+WDWLRQ
Sbjct: 64  FSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCMVLHVSMAMWRFYFERRVEDLSWDWLRQ 123

Query: 123 IVGDILLALSWVFFLVYSWREKYD 147
           IVGDILLALSWVFFLVYSWREKYD
Sbjct: 124 IVGDILLALSWVFFLVYSWREKYD 147

[Close]
BLAST of Sed0003245 vs. TAIR 10
Match: AT1G53035.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15358.1); Has 49 Blast hits to 49 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 202.2 bits (513), Expect = 2.8e-52
Identity = 96/141 (68.09%), Postives = 117/141 (82.98%), Query Frame = 0 

Query: 6   STFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTSDSFSG 65
           S F VIC+LHS++A+TSGTLMMFY ++    G G++IA+KL GSTPHD+LLIQ S SFSG
Sbjct: 10  SLFRVICILHSIIALTSGTLMMFYTEKASIFGPGSEIASKLKGSTPHDELLIQISQSFSG 69

Query: 66  LLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVSMAMWRFYFERRVEDLAWDWLRQIVG 125
           LLLFAIG +LFMVSFVKD+EF  FFA G  +L+V MAMWR  FE ++EDLA++W +Q +G
Sbjct: 70  LLLFAIGLVLFMVSFVKDKEFHSFFAGGSVILYVLMAMWRVLFEWKIEDLAYEWPKQALG 129

Query: 126 DILLALSWVFFLVYSWREKYD 147
           DI LA+SWVFFLVYSWREKYD
Sbjct: 130 DIALAISWVFFLVYSWREKYD 150

[Close]
BLAST of Sed0003245 vs. TAIR 10
Match: AT3G15358.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53035.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 196.4 bits (498), Expect = 1.6e-50
Identity = 94/143 (65.73%), Postives = 116/143 (81.12%), Query Frame = 0 

Query: 4   SSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTSDSF 63
           +S  F VIC+LHS++A+TSGTLMMFY ++    GHG+DIA KL GSTPHD+ LIQ S SF
Sbjct: 2   NSYLFRVICILHSIIALTSGTLMMFYTEKASIFGHGSDIANKLKGSTPHDEQLIQISQSF 61

Query: 64  SGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVSMAMWRFYFERRVEDLAWDWLRQI 123
           SGLLLFAIG +LFMVSFVKDREF  FFA G  +L++ MA+WR  FE ++EDLA++  +Q 
Sbjct: 62  SGLLLFAIGLVLFMVSFVKDREFHSFFAAGSVILYMVMALWRVMFEWKIEDLAFECPKQA 121

Query: 124 VGDILLALSWVFFLVYSWREKYD 147
           +GDI LA+SWVFFLVY+WREKYD
Sbjct: 122 LGDIALAVSWVFFLVYTWREKYD 144

The following BLAST results are available for this feature:
BLAST of Sed0003245 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011658212.11.1e-7497.26uncharacterized protein LOC101204514 [Cucumis sativus][more]
XP_038881843.11.4e-7497.26uncharacterized protein LOC120073208 [Benincasa hispida][more]
XP_022926441.11.9e-7498.61uncharacterized protein LOC111433593 [Cucurbita moschata] >XP_023517142.1 unchar... [more]
XP_008439852.11.2e-7395.89PREDICTED: uncharacterized protein LOC103484518 [Cucumis melo] >KAA0052685.1 unc... [more]
XP_023003187.12.1e-7397.22uncharacterized protein LOC111496876 [Cucurbita maxima][more]
BLAST of Sed0003245 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Sed0003245 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KHM75.4e-7597.26Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G517380 PE=4 SV=1[more]
A0A6J1EEX89.2e-7598.61uncharacterized protein LOC111433593 OS=Cucurbita moschata OX=3662 GN=LOC1114335... [more]
A0A5D3CSC45.9e-7495.89Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3AZP85.9e-7495.89uncharacterized protein LOC103484518 OS=Cucumis melo OX=3656 GN=LOC103484518 PE=... [more]
A0A6J1KLR61.0e-7397.22uncharacterized protein LOC111496876 OS=Cucurbita maxima OX=3661 GN=LOC111496876... [more]
BLAST of Sed0003245 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G53035.12.8e-5268.09unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G15358.11.6e-5065.73unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34274TRANSMEMBRANE PROTEINcoord: 3..146
NoneNo IPR availablePANTHERPTHR34274:SF7PROTEIN, PUTATIVE-RELATEDcoord: 3..146

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0003245.1Sed0003245.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane