Sed0003241 (gene) Chayote v1

Overview


Name	Sed0003241
Type	gene
Organism	Sechium edule (Chayote v1)
Description	ethylene-responsive transcription factor 1B-like
Location	LG09: 34167373 .. 34168044 (-)
RNA-Seq Expression	Sed0003241
Synteny	Sed0003241

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGTTGATAATTATCATTTCTTTGGCTACAAAGAAAATTTCTTGTGGAGCAATAATACTGAAAGTTTCCCCGGGCAAGAGATCAATTCTCACCTCTCATTTGACTTCAATTACTTGGAGGAGATGTTGCTCGGGGAGGCCGGAGGAGCGACATCGTCGTCGTCGGATTCGAGCTCTTACTCGTCTTCGATGGTGGAAGTCAAGGAGGAAATAGAAGAAGAGAGTTTGAGCGACGTTGTTGTGCAGGAAGATGAATTATTGCACAAGGAGGAGAGGGCATATAGAGGGGTGCGGAGAAGGCCATGGGGGAAGTACGCGGCCGAGATAAGGGACTCGACGCGACAAGGGGTCAGGGTTTGGTTGGGGACGTTTGAGAGTGCAGAGGCTGCAGCGTTGGCCTATGACCAAGCCGCATTTTGCATGAAAGGGGCGCTAGCCACACTCAATTTTCCCGTGGAGGTTGTTCAAGAGTCGCTTCGAGAGATGATGTATCGGTGGGACGCTGGGAGCTCACCTGTCTTGGCGCTCAAGCGACGCCACTCGATAAAAAGGAAGAAGATGGCAGAGGTGGAAAAGATGGAGAAAAAGATGAAGAAGAAGAAAACTGTGGTGGTTTTTGAGGATTTGGGTGTTGAGTACTTAGAAGAACTCTTAAGTTTGACTTCTTAA

mRNA sequence

ATGTCGGTTGATAATTATCATTTCTTTGGCTACAAAGAAAATTTCTTGTGGAGCAATAATACTGAAAGTTTCCCCGGGCAAGAGATCAATTCTCACCTCTCATTTGACTTCAATTACTTGGAGGAGATGTTGCTCGGGGAGGCCGGAGGAGCGACATCGTCGTCGTCGGATTCGAGCTCTTACTCGTCTTCGATGGTGGAAGTCAAGGAGGAAATAGAAGAAGAGAGTTTGAGCGACGTTGTTGTGCAGGAAGATGAATTATTGCACAAGGAGGAGAGGGCATATAGAGGGGTGCGGAGAAGGCCATGGGGGAAGTACGCGGCCGAGATAAGGGACTCGACGCGACAAGGGGTCAGGGTTTGGTTGGGGACGTTTGAGAGTGCAGAGGCTGCAGCGTTGGCCTATGACCAAGCCGCATTTTGCATGAAAGGGGCGCTAGCCACACTCAATTTTCCCGTGGAGGTTGTTCAAGAGTCGCTTCGAGAGATGATGTATCGGTGGGACGCTGGGAGCTCACCTGTCTTGGCGCTCAAGCGACGCCACTCGATAAAAAGGAAGAAGATGGCAGAGGTGGAAAAGATGGAGAAAAAGATGAAGAAGAAGAAAACTGTGGTGGTTTTTGAGGATTTGGGTGTTGAGTACTTAGAAGAACTCTTAAGTTTGACTTCTTAA

Coding sequence (CDS)

ATGTCGGTTGATAATTATCATTTCTTTGGCTACAAAGAAAATTTCTTGTGGAGCAATAATACTGAAAGTTTCCCCGGGCAAGAGATCAATTCTCACCTCTCATTTGACTTCAATTACTTGGAGGAGATGTTGCTCGGGGAGGCCGGAGGAGCGACATCGTCGTCGTCGGATTCGAGCTCTTACTCGTCTTCGATGGTGGAAGTCAAGGAGGAAATAGAAGAAGAGAGTTTGAGCGACGTTGTTGTGCAGGAAGATGAATTATTGCACAAGGAGGAGAGGGCATATAGAGGGGTGCGGAGAAGGCCATGGGGGAAGTACGCGGCCGAGATAAGGGACTCGACGCGACAAGGGGTCAGGGTTTGGTTGGGGACGTTTGAGAGTGCAGAGGCTGCAGCGTTGGCCTATGACCAAGCCGCATTTTGCATGAAAGGGGCGCTAGCCACACTCAATTTTCCCGTGGAGGTTGTTCAAGAGTCGCTTCGAGAGATGATGTATCGGTGGGACGCTGGGAGCTCACCTGTCTTGGCGCTCAAGCGACGCCACTCGATAAAAAGGAAGAAGATGGCAGAGGTGGAAAAGATGGAGAAAAAGATGAAGAAGAAGAAAACTGTGGTGGTTTTTGAGGATTTGGGTGTTGAGTACTTAGAAGAACTCTTAAGTTTGACTTCTTAA

Protein sequence

MSVDNYHFFGYKENFLWSNNTESFPGQEINSHLSFDFNYLEEMLLGEAGGATSSSSDSSSYSSSMVEVKEEIEEESLSDVVVQEDELLHKEERAYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFESAEAAALAYDQAAFCMKGALATLNFPVEVVQESLREMMYRWDAGSSPVLALKRRHSIKRKKMAEVEKMEKKMKKKKTVVVFEDLGVEYLEELLSLTS

Homology

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BLAST of Sed0003241 vs. NCBI nr
Match: KAG7025485.1 (Ethylene-responsive transcription factor 1B, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 295.4 bits (755), Expect = 4.0e-76
Identity = 169/224 (75.45%), Postives = 187/224 (83.48%), Query Frame = 0


Query: 1   MSVDNYHFFGYKENFLWSNNTESFPGQEINSHLSFDFNYLEEMLLGEAG-GATSSSSDSS 60
           MS+DN H FGY+ENF      E+FPG++ NSHLSF FNYLEEML  +    ++SSSSDSS
Sbjct: 1   MSLDN-HLFGYQENF------ENFPGKQ-NSHLSFHFNYLEEMLFADMSLSSSSSSSDSS 60

Query: 61  SYSSSMVEVKEEIEEESLSDVVVQEDELLHKEERAYRGVRRRPWGKYAAEIRDSTRQGVR 120
              S  + VKEEIE+    D++VQ D    KEERAYRGVRRRPWGKYAAEIRDSTRQGVR
Sbjct: 61  PCLSPEMHVKEEIED---GDIIVQ-DAQTQKEERAYRGVRRRPWGKYAAEIRDSTRQGVR 120

Query: 121 VWLGTFESAEAAALAYDQAAFCMKGALATLNFPVEVVQESLREMMYRWDAGSSPVLALKR 180
           VWLGTF+SAEAAALAYDQAAFCM+GALATLNFPVEVV+ESL EM YRW+ G SPVLALKR
Sbjct: 121 VWLGTFDSAEAAALAYDQAAFCMRGALATLNFPVEVVRESLYEMKYRWEVGCSPVLALKR 180

Query: 181 RHSIKRKKMAEVEKMEKKMKKKKTVVVFEDLGVEYLEELLSLTS 224
           RH+I+RKKMAE EKMEKKMKKKK VVVFEDLGVEYLEELLSLTS
Sbjct: 181 RHTIRRKKMAEAEKMEKKMKKKKNVVVFEDLGVEYLEELLSLTS 212

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BLAST of Sed0003241 vs. NCBI nr
Match: XP_023514563.1 (ethylene-responsive transcription factor 1B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 295.0 bits (754), Expect = 5.3e-76
Identity = 170/224 (75.89%), Postives = 187/224 (83.48%), Query Frame = 0


Query: 1   MSVDNYHFFGYKENFLWSNNTESFPGQEINSHLSFDFNYLEEMLLGEAG-GATSSSSDSS 60
           MS+ N H FGY+ENF      E+FPG++ NSHLSF FNYLEEML  +    ++SSSSDSS
Sbjct: 1   MSLHN-HLFGYQENF------ENFPGKQ-NSHLSFHFNYLEEMLFADMSLSSSSSSSDSS 60

Query: 61  SYSSSMVEVKEEIEEESLSDVVVQEDELLHKEERAYRGVRRRPWGKYAAEIRDSTRQGVR 120
              S  + VKEEIE+    D+VVQED    KEERAYRGVRRRPWGKYAAEIRDSTRQGVR
Sbjct: 61  PCLSPEMHVKEEIED---GDIVVQEDR-TPKEERAYRGVRRRPWGKYAAEIRDSTRQGVR 120

Query: 121 VWLGTFESAEAAALAYDQAAFCMKGALATLNFPVEVVQESLREMMYRWDAGSSPVLALKR 180
           VWLGTF+SAEAAALAYDQAAFCM+GALATLNFPVEVV+ESL EM YRW+ G SPVLALKR
Sbjct: 121 VWLGTFDSAEAAALAYDQAAFCMRGALATLNFPVEVVRESLYEMKYRWEVGCSPVLALKR 180

Query: 181 RHSIKRKKMAEVEKMEKKMKKKKTVVVFEDLGVEYLEELLSLTS 224
           RH+I+RKKMAE EKMEKKMKKKK VVVFEDLGVEYLEELLSLTS
Sbjct: 181 RHTIRRKKMAEAEKMEKKMKKKKNVVVFEDLGVEYLEELLSLTS 212

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BLAST of Sed0003241 vs. NCBI nr
Match: KAG6593075.1 (Ethylene-response factor C3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 292.7 bits (748), Expect = 2.6e-75
Identity = 168/224 (75.00%), Postives = 186/224 (83.04%), Query Frame = 0


Query: 1   MSVDNYHFFGYKENFLWSNNTESFPGQEINSHLSFDFNYLEEMLLGEAG-GATSSSSDSS 60
           MS+ N H FGY+ENF      E+FPG++ NSHLSF FNYLEEML  +    ++SSSSDSS
Sbjct: 1   MSLHN-HLFGYQENF------ENFPGKQ-NSHLSFHFNYLEEMLFADMSLSSSSSSSDSS 60

Query: 61  SYSSSMVEVKEEIEEESLSDVVVQEDELLHKEERAYRGVRRRPWGKYAAEIRDSTRQGVR 120
              S  + VKEEIE+    D++VQ D    KEERAYRGVRRRPWGKYAAEIRDSTRQGVR
Sbjct: 61  PCLSPEMHVKEEIED---GDIIVQ-DAQTQKEERAYRGVRRRPWGKYAAEIRDSTRQGVR 120

Query: 121 VWLGTFESAEAAALAYDQAAFCMKGALATLNFPVEVVQESLREMMYRWDAGSSPVLALKR 180
           VWLGTF+SAEAAALAYDQAAFCM+GALATLNFPVEVV+ESL EM YRW+ G SPVLALKR
Sbjct: 121 VWLGTFDSAEAAALAYDQAAFCMRGALATLNFPVEVVRESLYEMKYRWEVGCSPVLALKR 180

Query: 181 RHSIKRKKMAEVEKMEKKMKKKKTVVVFEDLGVEYLEELLSLTS 224
           RH+I+RKKMAE EKMEKKMKKKK VVVFEDLGVEYLEELLSLTS
Sbjct: 181 RHTIRRKKMAEAEKMEKKMKKKKNVVVFEDLGVEYLEELLSLTS 212

[Close]

BLAST of Sed0003241 vs. NCBI nr
Match: XP_022959670.1 (ethylene-responsive transcription factor 1B-like [Cucurbita moschata])

HSP 1 Score: 292.4 bits (747), Expect = 3.4e-75
Identity = 168/223 (75.34%), Postives = 185/223 (82.96%), Query Frame = 0


Query: 1   MSVDNYHFFGYKENFLWSNNTESFPGQEINSHLSFDFNYLEEMLLGEAGGATSSSSDSSS 60
           MS+ N H FGY+ENF      E+FPG++ NSHLSF FNYLEEML  +    +SSSSDSS 
Sbjct: 1   MSLHN-HLFGYQENF------ENFPGKQ-NSHLSFHFNYLEEMLFADM-SLSSSSSDSSP 60

Query: 61  YSSSMVEVKEEIEEESLSDVVVQEDELLHKEERAYRGVRRRPWGKYAAEIRDSTRQGVRV 120
             S  + VKEEIE+    D++VQ D    KEERAYRGVRRRPWGKYAAEIRDSTRQGVRV
Sbjct: 61  CLSPEMHVKEEIED---GDIIVQ-DAQTQKEERAYRGVRRRPWGKYAAEIRDSTRQGVRV 120

Query: 121 WLGTFESAEAAALAYDQAAFCMKGALATLNFPVEVVQESLREMMYRWDAGSSPVLALKRR 180
           WLGTF+SAEAAALAYDQAAFCM+GALATLNFPVEVV+ESL EM YRW+ G SPVLALKRR
Sbjct: 121 WLGTFDSAEAAALAYDQAAFCMRGALATLNFPVEVVRESLYEMKYRWEVGCSPVLALKRR 180

Query: 181 HSIKRKKMAEVEKMEKKMKKKKTVVVFEDLGVEYLEELLSLTS 224
           H+I+RKKMAE EKMEKKMKKKK VVVFEDLGVEYLEELLSLTS
Sbjct: 181 HTIRRKKMAEAEKMEKKMKKKKNVVVFEDLGVEYLEELLSLTS 210

[Close]

BLAST of Sed0003241 vs. NCBI nr
Match: XP_038899832.1 (ethylene-response factor C3-like [Benincasa hispida])

HSP 1 Score: 290.4 bits (742), Expect = 1.3e-74
Identity = 169/230 (73.48%), Postives = 188/230 (81.74%), Query Frame = 0


Query: 1   MSVDNYHFFGYKENFLWSNN-TESFPGQEINSHLSFDFNYLEEMLLG----EAGGATSSS 60
           MS+ +  F  Y+E+FLW+NN  ESF   E     SFDFNYL+EML      E    T+SS
Sbjct: 1   MSIVSDLFGNYQESFLWNNNHNESFISGE---ESSFDFNYLKEMLFDDMFVEVAEGTTSS 60

Query: 61  SDSSSYSSSMVEVKEEIEEE-SLSDVVVQEDELLHKEERAYRGVRRRPWGKYAAEIRDST 120
             SS  S  +++VKEEIEEE S SD +V +++  HKEER YRGVRRRPWGKYAAEIRDST
Sbjct: 61  DSSSCSSPVVMQVKEEIEEEGSFSDDIVVQEDQSHKEERVYRGVRRRPWGKYAAEIRDST 120

Query: 121 RQGVRVWLGTFESAEAAALAYDQAAFCMKGALATLNFPVEVVQESLREMMYRWDAGSSPV 180
           RQGVRVWLGTF+SAEAAALAYDQAAFCM+G LATLNFPVEVV+ESLREM YRW+AG SPV
Sbjct: 121 RQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPVEVVRESLREMKYRWEAGCSPV 180

Query: 181 LALKRRHSIKRKKMAEVEKMEKK-MKKKKTVVVFEDLGVEYLEELLSLTS 224
           LALKRRHSI+RKKMAEVEKMEKK MKKKKTVVVFEDLGVEYLEELLSLTS
Sbjct: 181 LALKRRHSIRRKKMAEVEKMEKKMMKKKKTVVVFEDLGVEYLEELLSLTS 227

[Close]

BLAST of Sed0003241 vs. ExPASy Swiss-Prot
Match: A0A3Q7I5Y9 (Ethylene-response factor C3 OS=Solanum lycopersicum OX=4081 GN=ERF.C.3 PE=2 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 7.5e-41
Identity = 101/187 (54.01%), Postives = 131/187 (70.05%), Query Frame = 0


Query: 33  LSFDFNYLEEMLLGEAGGATSSSSDSSSYSSSMVEVKEEIEEESLSDVVVQEDELLHKEE 92
           L F+ N  ++MLL         SS  +  SSS   +KEE       +V   E+E   +++
Sbjct: 16  LPFNVNDTQDMLLYNL--VAEGSSQETVNSSSSYGIKEE-------EVTSYEEE---RKD 75

Query: 93  RAYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFESAEAAALAYDQAAFCMKGALATLNFP 152
           + YRGVR+RPWGKYAAEIRDSTR GVRVWLGTF++AE AALAYDQAAF M+G++A LNFP
Sbjct: 76  KNYRGVRKRPWGKYAAEIRDSTRNGVRVWLGTFDNAEEAALAYDQAAFAMRGSMAILNFP 135

Query: 153 VEVVQESLREMMYRWDAGSSPVLALKRRHSIKRKKMAEVEKMEKKMKKKKTVVVFEDLGV 212
           VE+V+ESL EM  R+D   SPV+ LK+R+S++RK ++      +K + +K VVVFEDLG 
Sbjct: 136 VEIVKESLNEMKCRFDGNCSPVIELKKRYSMRRKSVS------RKNRARKDVVVFEDLGA 184

Query: 213 EYLEELL 220
           EYLEELL
Sbjct: 196 EYLEELL 184

[Close]

BLAST of Sed0003241 vs. ExPASy Swiss-Prot
Match: Q8LDC8 (Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana OX=3702 GN=ERF1B PE=1 SV=2)

HSP 1 Score: 156.8 bits (395), Expect = 2.9e-37
Identity = 102/216 (47.22%), Postives = 135/216 (62.50%), Query Frame = 0


Query: 8   FFGYKENFLWSNNTESFPGQEINSH-LSFDFNYLEEMLLGEAGGATSSSSDSSSYSSSMV 67
           F G+   +   ++ +SF     N++ L F+ N  EEM L    G    S+  +   S   
Sbjct: 10  FSGFSPEYSIGSSPDSFSSSSSNNYSLPFNENDSEEMFL---YGLIEQSTQQTYIDSD-- 69

Query: 68  EVKEEIEEESLSDVVVQEDELLHKEERAYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFE 127
              +++  +S+S           K E++YRGVRRRPWGK+AAEIRDSTR G+RVWLGTFE
Sbjct: 70  --SQDLPIKSVSS---------RKSEKSYRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFE 129

Query: 128 SAEAAALAYDQAAFCMKGALATLNFPVEVVQESLREMMYRWDAGSSPVLALKRRHSIKRK 187
           SAE AALAYDQAAF M+G+ A LNF  E VQESL E+ Y ++ G SPV+ALKR+HS++R+
Sbjct: 130 SAEEAALAYDQAAFSMRGSSAILNFSAERVQESLSEIKYTYEDGCSPVVALKRKHSMRRR 189

Query: 188 ---KMAEVEKMEKKMKKKKTVVVFEDLGVEYLEELL 220
              K  +    + +  K   VVVFEDLG +YLEELL
Sbjct: 190 MTNKKTKDSDFDHRSVKLDNVVVFEDLGEQYLEELL 209

[Close]

BLAST of Sed0003241 vs. ExPASy Swiss-Prot
Match: Q8VYM0 (Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=ERF15 PE=2 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 4.7e-35
Identity = 94/194 (48.45%), Postives = 123/194 (63.40%), Query Frame = 0


Query: 55  SSDSSSYSSSMVEVKEEIEEESLSDVVVQEDELLHKEERAYRGVRRRPWGKYAAEIRDST 114
           S D  S+ S  + +KEEI+   +S+   +E+++   EER+YRGVR+RPWGK+AAEIRDST
Sbjct: 47  SDDFFSFESPEMMIKEEIQNGDVSN-SEEEEKVGIDEERSYRGVRKRPWGKFAAEIRDST 106

Query: 115 RQGVRVWLGTFESAEAAALAYDQAAFCMKGALATLNFPVEVVQESLREM-MYRWDAGSSP 174
           R G+RVWLGTF+ AE AALAYDQAAF  KG+LATLNFPVEVV+ESL++M       G SP
Sbjct: 107 RNGIRVWLGTFDKAEEAALAYDQAAFATKGSLATLNFPVEVVRESLKKMENVNLHDGGSP 166

Query: 175 VLALKRRHSIKRKKMAE----------------------------VEKMEKKMKKKKTVV 220
           V+ALKR+HS++ +   +                              K     ++  T+V
Sbjct: 167 VMALKRKHSLRNRPRGKKRSSSSSSSSSNSSSCSSSSSTSSTSRSSSKQSVVKQESGTLV 226

[Close]

BLAST of Sed0003241 vs. ExPASy Swiss-Prot
Match: Q9LND1 (Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana OX=3702 GN=ERF094 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.5e-33
Identity = 99/237 (41.77%), Postives = 135/237 (56.96%), Query Frame = 0


Query: 17  WSNNTESFPGQEINSHLSFDFNYLEEMLLGEAGGATSSSSDSSSYSSSMVEVKEEIEEES 76
           WS+  ESF  +E   H SFD ++L              SS + +Y       +  I +E 
Sbjct: 22  WSSQ-ESFLWEESFLHQSFDQSFL-------------LSSPTDNYCDDFFAFESSIIKEE 81

Query: 77  LSDVVVQEDELLHKEERAYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFESAEAAALAYD 136
             +  V  +E    EE++YRGVR+RPWGK+AAEIRDSTR+G+RVWLGTF++AEAAALAYD
Sbjct: 82  GKEATVAAEE----EEKSYRGVRKRPWGKFAAEIRDSTRKGIRVWLGTFDTAEAAALAYD 141

Query: 137 QAAFCMKGALATLNFPVEVVQESLREM-MYRWDAGSSPVLALKRRHSIKRK--------- 196
           QAAF +KG+LA LNFP +VV+ESLR+M     + G SPV+ALKR+HS++ +         
Sbjct: 142 QAAFALKGSLAVLNFPADVVEESLRKMENVNLNDGESPVIALKRKHSMRNRPRGKKKSSS 201

Query: 197 ---------------KMAEVEKMEKKMKKKK---------TVVVFEDLGVEYLEELL 220
                            +    +  + +K+          T+VV EDLG EYLEEL+
Sbjct: 202 SSTLTSSPSSSSSYSSSSSSSSLSSRSRKQSVVMTQESNTTLVVLEDLGAEYLEELM 240

[Close]

BLAST of Sed0003241 vs. ExPASy Swiss-Prot
Match: O04681 (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum OX=4081 GN=PTI5 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.5e-22
Identity = 51/68 (75.00%), Postives = 57/68 (83.82%), Query Frame = 0


Query: 93  RAYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFESAEAAALAYDQAAFCMKGALATLNFP 152
           + YRGVRRRPWGKYAAEIRDS R G RVWLGTFE+AE AALAYD+AAF M+GA A LNFP
Sbjct: 57  KKYRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNFP 116

Query: 153 VEVVQESL 161
            E+V  S+
Sbjct: 117 SEIVNASV 124

[Close]

BLAST of Sed0003241 vs. ExPASy TrEMBL
Match: A0A6J1H6Z0 (ethylene-responsive transcription factor 1B-like OS=Cucurbita moschata OX=3662 GN=LOC111460680 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.7e-75
Identity = 168/223 (75.34%), Postives = 185/223 (82.96%), Query Frame = 0


Query: 1   MSVDNYHFFGYKENFLWSNNTESFPGQEINSHLSFDFNYLEEMLLGEAGGATSSSSDSSS 60
           MS+ N H FGY+ENF      E+FPG++ NSHLSF FNYLEEML  +    +SSSSDSS 
Sbjct: 1   MSLHN-HLFGYQENF------ENFPGKQ-NSHLSFHFNYLEEMLFADM-SLSSSSSDSSP 60

Query: 61  YSSSMVEVKEEIEEESLSDVVVQEDELLHKEERAYRGVRRRPWGKYAAEIRDSTRQGVRV 120
             S  + VKEEIE+    D++VQ D    KEERAYRGVRRRPWGKYAAEIRDSTRQGVRV
Sbjct: 61  CLSPEMHVKEEIED---GDIIVQ-DAQTQKEERAYRGVRRRPWGKYAAEIRDSTRQGVRV 120

Query: 121 WLGTFESAEAAALAYDQAAFCMKGALATLNFPVEVVQESLREMMYRWDAGSSPVLALKRR 180
           WLGTF+SAEAAALAYDQAAFCM+GALATLNFPVEVV+ESL EM YRW+ G SPVLALKRR
Sbjct: 121 WLGTFDSAEAAALAYDQAAFCMRGALATLNFPVEVVRESLYEMKYRWEVGCSPVLALKRR 180

Query: 181 HSIKRKKMAEVEKMEKKMKKKKTVVVFEDLGVEYLEELLSLTS 224
           H+I+RKKMAE EKMEKKMKKKK VVVFEDLGVEYLEELLSLTS
Sbjct: 181 HTIRRKKMAEAEKMEKKMKKKKNVVVFEDLGVEYLEELLSLTS 210

[Close]

BLAST of Sed0003241 vs. ExPASy TrEMBL
Match: A0A6J1KW25 (ethylene-responsive transcription factor 1B-like OS=Cucurbita maxima OX=3661 GN=LOC111497706 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.4e-74
Identity = 168/224 (75.00%), Postives = 186/224 (83.04%), Query Frame = 0


Query: 1   MSVDNYHFFGYKENFLWSNNTESFPGQEINSHLSFDFNYLEEMLLGEAGG-ATSSSSDSS 60
           MS+DN H FGY+ENF       +FPG+E NSHLSFDFNYLEEML  +    ++SSSSDSS
Sbjct: 1   MSLDN-HLFGYQENF------RTFPGKE-NSHLSFDFNYLEEMLFADMSSLSSSSSSDSS 60

Query: 61  SYSSSMVEVKEEIEEESLSDVVVQEDELLHKEERAYRGVRRRPWGKYAAEIRDSTRQGVR 120
              S  + VKEEIE+    D+VVQ+D    KEERAYRGVRRRPWGKYAAEIRDSTRQGVR
Sbjct: 61  PCLSPEMHVKEEIED---GDIVVQDDR-TPKEERAYRGVRRRPWGKYAAEIRDSTRQGVR 120

Query: 121 VWLGTFESAEAAALAYDQAAFCMKGALATLNFPVEVVQESLREMMYRWDAGSSPVLALKR 180
           VWLGTF+SAEAAALAYDQAAFCM+GALATLNFP EVV+ESL EM YRW+ G SPVLALKR
Sbjct: 121 VWLGTFDSAEAAALAYDQAAFCMRGALATLNFPAEVVRESLYEMKYRWEVGCSPVLALKR 180

Query: 181 RHSIKRKKMAEVEKMEKKMKKKKTVVVFEDLGVEYLEELLSLTS 224
           RH+I+RKK+AE EKMEKKM KKK VVVFEDLGVEYLEELLSLTS
Sbjct: 181 RHTIRRKKIAEAEKMEKKM-KKKNVVVFEDLGVEYLEELLSLTS 211

[Close]

BLAST of Sed0003241 vs. ExPASy TrEMBL
Match: A0A0A0K4U4 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G375820 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.3e-72
Identity = 167/234 (71.37%), Postives = 190/234 (81.20%), Query Frame = 0


Query: 1   MSVDNYHFFGYKENFLWSN-NTESFPGQEINSHLSFDFNYLEEMLLGEAGGA--TSSSSD 60
           MS+ +  F  Y+ENFLW+N + +SF   E     SFDFNYL +ML  +   A  T SSSD
Sbjct: 1   MSILSDFFGNYQENFLWNNDHNQSFISGE---ETSFDFNYLNDMLFDDMVFAEETMSSSD 60

Query: 61  SSSYSSSM-VEVKE-----EIEEESLSDVVVQEDELLHKEERAYRGVRRRPWGKYAAEIR 120
           SSS SS + ++VKE     E+EE S+ D VV E++  HKEER YRGVRRRPWGKYAAEIR
Sbjct: 61  SSSCSSPIELQVKEEVVEVEVEEGSVCDEVVVEEDQSHKEERVYRGVRRRPWGKYAAEIR 120

Query: 121 DSTRQGVRVWLGTFESAEAAALAYDQAAFCMKGALATLNFPVEVVQESLREMMYRWDAGS 180
           DSTRQGVRVWLGTF+SAEAAALAYDQAAFCM+G LATLNFP+EVV+ESLREM YRW+ GS
Sbjct: 121 DSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPIEVVRESLREMKYRWEVGS 180

Query: 181 SPVLALKRRHSIKRKKMAEVEKMEKKM--KKKKTVVVFEDLGVEYLEELLSLTS 224
           SPVLALKRRHSI+RK+MAEVEKMEKKM  KKKK+VVVFEDLGVEYLEELLSLTS
Sbjct: 181 SPVLALKRRHSIQRKRMAEVEKMEKKMMKKKKKSVVVFEDLGVEYLEELLSLTS 231

[Close]

BLAST of Sed0003241 vs. ExPASy TrEMBL
Match: A0A5D3C9K8 (Ethylene-responsive transcription factor 1B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00670 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 5.5e-71
Identity = 167/238 (70.17%), Postives = 189/238 (79.41%), Query Frame = 0


Query: 1   MSVDNYHFFGYKENFLWSNN--TESFPGQEINSHLSFDFNYLEEMLLGE----AGGATSS 60
           MS+ +  F  Y+ENFLW+N+       GQE     SFDFNYL +ML  +    A   T S
Sbjct: 1   MSIVSDLFGNYQENFLWNNDHCGSLISGQE---ESSFDFNYLNKMLFDDMVSVAAEETMS 60

Query: 61  SSDSSSYSSSMV-EVKE-----EIEEESLSDVVVQEDELLHKEERAYRGVRRRPWGKYAA 120
           SSDSSS SSS+V +VKE     E++E S S+ VV E++  HKEER YRGVRRRPWGKYAA
Sbjct: 61  SSDSSSCSSSIVMQVKEEVVEVEVDEGSFSEDVVVEEDQSHKEERVYRGVRRRPWGKYAA 120

Query: 121 EIRDSTRQGVRVWLGTFESAEAAALAYDQAAFCMKGALATLNFPVEVVQESLREMMYRWD 180
           EIRDSTRQGVRVWLGTF+SAEAAALAYDQAAFCM+G LATLNFP+EVV+ESLREM YR +
Sbjct: 121 EIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPIEVVRESLREMKYRRE 180

Query: 181 AGSSPVLALKRRHSIKRKKMAEVEKMEKKM---KKKKTVVVFEDLGVEYLEELLSLTS 224
            GSSPVLALKRRHSI+RK+MAEVEKMEKKM   KKKK+VVVFEDLGVEYLEELLSLTS
Sbjct: 181 VGSSPVLALKRRHSIQRKRMAEVEKMEKKMMKKKKKKSVVVFEDLGVEYLEELLSLTS 235

[Close]

BLAST of Sed0003241 vs. ExPASy TrEMBL
Match: A0A1S3BQG1 (ethylene-responsive transcription factor 1B-like OS=Cucumis melo OX=3656 GN=LOC103492600 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 5.5e-71
Identity = 167/238 (70.17%), Postives = 189/238 (79.41%), Query Frame = 0


Query: 1   MSVDNYHFFGYKENFLWSNN--TESFPGQEINSHLSFDFNYLEEMLLGE----AGGATSS 60
           MS+ +  F  Y+ENFLW+N+       GQE     SFDFNYL +ML  +    A   T S
Sbjct: 1   MSIVSDLFGNYQENFLWNNDHCGSLISGQE---ESSFDFNYLNKMLFDDMVSVAAEETMS 60

Query: 61  SSDSSSYSSSMV-EVKE-----EIEEESLSDVVVQEDELLHKEERAYRGVRRRPWGKYAA 120
           SSDSSS SSS+V +VKE     E++E S S+ VV E++  HKEER YRGVRRRPWGKYAA
Sbjct: 61  SSDSSSCSSSIVMQVKEEVVEVEVDEGSFSEDVVVEEDQSHKEERVYRGVRRRPWGKYAA 120

Query: 121 EIRDSTRQGVRVWLGTFESAEAAALAYDQAAFCMKGALATLNFPVEVVQESLREMMYRWD 180
           EIRDSTRQGVRVWLGTF+SAEAAALAYDQAAFCM+G LATLNFP+EVV+ESLREM YR +
Sbjct: 121 EIRDSTRQGVRVWLGTFDSAEAAALAYDQAAFCMRGGLATLNFPIEVVRESLREMKYRRE 180

Query: 181 AGSSPVLALKRRHSIKRKKMAEVEKMEKKM---KKKKTVVVFEDLGVEYLEELLSLTS 224
            GSSPVLALKRRHSI+RK+MAEVEKMEKKM   KKKK+VVVFEDLGVEYLEELLSLTS
Sbjct: 181 VGSSPVLALKRRHSIQRKRMAEVEKMEKKMMKKKKKKSVVVFEDLGVEYLEELLSLTS 235

[Close]

BLAST of Sed0003241 vs. TAIR 10
Match: AT3G23240.1 (ethylene response factor 1 )

HSP 1 Score: 156.8 bits (395), Expect = 2.1e-38
Identity = 102/216 (47.22%), Postives = 135/216 (62.50%), Query Frame = 0


Query: 8   FFGYKENFLWSNNTESFPGQEINSH-LSFDFNYLEEMLLGEAGGATSSSSDSSSYSSSMV 67
           F G+   +   ++ +SF     N++ L F+ N  EEM L    G    S+  +   S   
Sbjct: 10  FSGFSPEYSIGSSPDSFSSSSSNNYSLPFNENDSEEMFL---YGLIEQSTQQTYIDSD-- 69

Query: 68  EVKEEIEEESLSDVVVQEDELLHKEERAYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFE 127
              +++  +S+S           K E++YRGVRRRPWGK+AAEIRDSTR G+RVWLGTFE
Sbjct: 70  --SQDLPIKSVSS---------RKSEKSYRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFE 129

Query: 128 SAEAAALAYDQAAFCMKGALATLNFPVEVVQESLREMMYRWDAGSSPVLALKRRHSIKRK 187
           SAE AALAYDQAAF M+G+ A LNF  E VQESL E+ Y ++ G SPV+ALKR+HS++R+
Sbjct: 130 SAEEAALAYDQAAFSMRGSSAILNFSAERVQESLSEIKYTYEDGCSPVVALKRKHSMRRR 189

Query: 188 ---KMAEVEKMEKKMKKKKTVVVFEDLGVEYLEELL 220
              K  +    + +  K   VVVFEDLG +YLEELL
Sbjct: 190 MTNKKTKDSDFDHRSVKLDNVVVFEDLGEQYLEELL 209

[Close]

BLAST of Sed0003241 vs. TAIR 10
Match: AT2G31230.1 (ethylene-responsive element binding factor 15 )

HSP 1 Score: 149.4 bits (376), Expect = 3.3e-36
Identity = 94/194 (48.45%), Postives = 123/194 (63.40%), Query Frame = 0


Query: 55  SSDSSSYSSSMVEVKEEIEEESLSDVVVQEDELLHKEERAYRGVRRRPWGKYAAEIRDST 114
           S D  S+ S  + +KEEI+   +S+   +E+++   EER+YRGVR+RPWGK+AAEIRDST
Sbjct: 47  SDDFFSFESPEMMIKEEIQNGDVSN-SEEEEKVGIDEERSYRGVRKRPWGKFAAEIRDST 106

Query: 115 RQGVRVWLGTFESAEAAALAYDQAAFCMKGALATLNFPVEVVQESLREM-MYRWDAGSSP 174
           R G+RVWLGTF+ AE AALAYDQAAF  KG+LATLNFPVEVV+ESL++M       G SP
Sbjct: 107 RNGIRVWLGTFDKAEEAALAYDQAAFATKGSLATLNFPVEVVRESLKKMENVNLHDGGSP 166

Query: 175 VLALKRRHSIKRKKMAE----------------------------VEKMEKKMKKKKTVV 220
           V+ALKR+HS++ +   +                              K     ++  T+V
Sbjct: 167 VMALKRKHSLRNRPRGKKRSSSSSSSSSNSSSCSSSSSTSSTSRSSSKQSVVKQESGTLV 226

[Close]

BLAST of Sed0003241 vs. TAIR 10
Match: AT1G06160.1 (octadecanoid-responsive Arabidopsis AP2/ERF 59 )

HSP 1 Score: 144.4 bits (363), Expect = 1.1e-34
Identity = 99/237 (41.77%), Postives = 135/237 (56.96%), Query Frame = 0


Query: 17  WSNNTESFPGQEINSHLSFDFNYLEEMLLGEAGGATSSSSDSSSYSSSMVEVKEEIEEES 76
           WS+  ESF  +E   H SFD ++L              SS + +Y       +  I +E 
Sbjct: 22  WSSQ-ESFLWEESFLHQSFDQSFL-------------LSSPTDNYCDDFFAFESSIIKEE 81

Query: 77  LSDVVVQEDELLHKEERAYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFESAEAAALAYD 136
             +  V  +E    EE++YRGVR+RPWGK+AAEIRDSTR+G+RVWLGTF++AEAAALAYD
Sbjct: 82  GKEATVAAEE----EEKSYRGVRKRPWGKFAAEIRDSTRKGIRVWLGTFDTAEAAALAYD 141

Query: 137 QAAFCMKGALATLNFPVEVVQESLREM-MYRWDAGSSPVLALKRRHSIKRK--------- 196
           QAAF +KG+LA LNFP +VV+ESLR+M     + G SPV+ALKR+HS++ +         
Sbjct: 142 QAAFALKGSLAVLNFPADVVEESLRKMENVNLNDGESPVIALKRKHSMRNRPRGKKKSSS 201

Query: 197 ---------------KMAEVEKMEKKMKKKK---------TVVVFEDLGVEYLEELL 220
                            +    +  + +K+          T+VV EDLG EYLEEL+
Sbjct: 202 SSTLTSSPSSSSSYSSSSSSSSLSSRSRKQSVVMTQESNTTLVVLEDLGAEYLEELM 240

[Close]

BLAST of Sed0003241 vs. TAIR 10
Match: AT5G43410.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 95.5 bits (236), Expect = 5.7e-20
Identity = 46/64 (71.88%), Postives = 51/64 (79.69%), Query Frame = 0


Query: 91  EERAYRGVRRRPWGKYAAEIRDSTRQGVRVWLGTFESAEAAALAYDQAAFCMKGALATLN 150
           E   YRGVRRRPWGKYAAEIRDS + G RVWLGTF++AE AA AYDQAA+ M+G  A LN
Sbjct: 11  EHGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILN 70

Query: 151 FPVE 155
           FP E
Sbjct: 71  FPHE 74

[Close]

BLAST of Sed0003241 vs. TAIR 10
Match: AT4G17500.1 (ethylene responsive element binding factor 1 )

HSP 1 Score: 93.2 bits (230), Expect = 2.8e-19
Identity = 58/116 (50.00%), Postives = 75/116 (64.66%), Query Frame = 0


Query: 49  GGATSSSSDSSSYSSSMVEVKEEIEEE--SLSDVVVQEDE-------LLHKEERAYRGVR 108
           GG   SSS S    SS   VK E  E   ++  V V++++       +   + + YRGVR
Sbjct: 93  GGWEPSSSSSDEDRSSFPSVKIETPESFAAVDSVPVKKEKTSPVSAAVTAAKGKHYRGVR 152

Query: 109 RRPWGKYAAEIRDSTRQGVRVWLGTFESAEAAALAYDQAAFCMKGALATLNFPVEV 156
           +RPWGK+AAEIRD  + G RVWLGTFE+AE AALAYD+AAF M+G+ A LNFP+ V
Sbjct: 153 QRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLRV 208

The following BLAST results are available for this feature:

BLAST of Sed0003241 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7025485.1	4.0e-76	75.45	Ethylene-responsive transcription factor 1B, partial [Cucurbita argyrosperma sub...	[more]
XP_023514563.1	5.3e-76	75.89	ethylene-responsive transcription factor 1B-like [Cucurbita pepo subsp. pepo]	[more]
KAG6593075.1	2.6e-75	75.00	Ethylene-response factor C3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022959670.1	3.4e-75	75.34	ethylene-responsive transcription factor 1B-like [Cucurbita moschata]	[more]
XP_038899832.1	1.3e-74	73.48	ethylene-response factor C3-like [Benincasa hispida]	[more]

BLAST of Sed0003241 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A3Q7I5Y9	7.5e-41	54.01	Ethylene-response factor C3 OS=Solanum lycopersicum OX=4081 GN=ERF.C.3 PE=2 SV=1	[more]
Q8LDC8	2.9e-37	47.22	Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
Q8VYM0	4.7e-35	48.45	Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
Q9LND1	1.5e-33	41.77	Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana OX=3702 ...	[more]
O04681	3.5e-22	75.00	Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicu...	[more]

BLAST of Sed0003241 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H6Z0	1.7e-75	75.34	ethylene-responsive transcription factor 1B-like OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1KW25	1.4e-74	75.00	ethylene-responsive transcription factor 1B-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A0A0K4U4	1.3e-72	71.37	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G375820 PE=...	[more]
A0A5D3C9K8	5.5e-71	70.17	Ethylene-responsive transcription factor 1B-like OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3BQG1	5.5e-71	70.17	ethylene-responsive transcription factor 1B-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]

BLAST of Sed0003241 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23240.1	2.1e-38	47.22	ethylene response factor 1	[more]
AT2G31230.1	3.3e-36	48.45	ethylene-responsive element binding factor 15	[more]
AT1G06160.1	1.1e-34	41.77	octadecanoid-responsive Arabidopsis AP2/ERF 59	[more]
AT5G43410.1	5.7e-20	71.88	Integrase-type DNA-binding superfamily protein	[more]
AT4G17500.1	2.8e-19	50.00	ethylene responsive element binding factor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 184..204
None	No IPR available	PANTHER	PTHR31190:SF132	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B	coord: 27..221
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 118..134 score: 64.71 coord: 95..106 score: 71.67
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 94..158 e-value: 6.6E-36 score: 135.3
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 95..144 e-value: 1.7E-13 score: 50.6
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 94..152 score: 22.576323
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 95..153 e-value: 2.89754E-19 score: 76.1563
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 94..155 e-value: 1.1E-25 score: 91.5
IPR044808	Ethylene-responsive transcription factor	PANTHER	PTHR31190	DNA-BINDING DOMAIN	coord: 27..221
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 94..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003241.1	Sed0003241.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity