Sed0003227 (gene) Chayote v1

Overview
NameSed0003227
Typegene
OrganismSechium edule (Chayote v1)
DescriptionIntegrase catalytic domain-containing protein
LocationLG04: 11534062 .. 11540641 (-)
RNA-Seq ExpressionSed0003227
SyntenySed0003227
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAGAAAGATTTCAAGATGGAGACTGAACCTCCTCCTCTTCCTCCCGTTCCTCTTCCTCACCCTCCTCTTCCTCATAGTATGTTCATCCTTATTTTTAATCCGCAAAATAATGTTTAAAAAATGGTTTCAAAATCGACATTGAATCCTCGTGGAAAACATAATCTAAAAGATTAATGTAATTTATTATCTTCCTTATAGAAAGATTTTACTATATGTCGTGATCAACATGTTTTACTTGATTGTATAAAATGATGTCCATTATCAAATATTGTTAATATGAATGTATTTGTTTATATATTAACAATACTTATTTTCTTATTTTTGTAGTTGTGGATATTGAGCCTCTTGCTCCTCGCGTCCCTCCTCCTCCTGCGGGTATGTCTATGTTCATCCTTATTTTAATTCATTAAATATTGTTTCCAAAATGGTTTTCAAAATACTGAAAGGAATGGTGTTCATTGTTTGGTAGTAATCCCAGTTCAACCATGCTAACATGTTCGGTCCCGAAAATCAGTACTTAGCTCTCATTTATTTGAGAGCAATAGCACCCTCTTTGTAGGGTGATCCGTATGTTTTAACTTGATTGTATAAGATAATGTCTATATCAAAATTTGCTAACATGAATGTATTTTTTAATATAGTAACGGTAGTTATTTTCTTATTTTTGTAGCTTTCGAGATTGAACCTCCTCCTGGTATGTTCATTCGTATTTTTAATTCCATAAATATTGTTTAAAAAATGGTTTCCAAAATCGTCATAATCCTCATGTGGAACCTAAATATAAAAGATTAAAGTAATTTATATTATCTTCCTGAAAGTAAGTCTCTACTATGTTGTGATCAATATGTTTAATTAATTTGGTTGTATAAGATGATTATCAAAATTTGTCAATATGAATGTATTTGTTAATTTATTAACAATAGTTATTTTCTTATTTGTGTAGCTGTAGAGAAACAAATTTGGCTTCAATTTCTTGATGTTATACTTGACATGGCAATCGTGATCATACAAAAAGAGAACCCTTATGTCAAAGTACAAGACCTCCGATACTGCTCCATCTCGAGTATTCGATTTCAATTTGGGTATGGTTTTTTCTACTCGTATACAATAGTAAACTTAGTTTCTTTTTATAAAAAAAATCGATGAAATAATTTTAATAGTTAAATTAAATGAACCCACTAAAATTAACAATCGTACATTTAAGGAAAAAAATTAAAATAATGTATGTGAACTTTTTTTTAGTTAGTATAATTAGACTGACATAATAAATGTTTTAATGATCAAAACGTATTTGAACTAATGAATTTGATTTTGTCGATATAAATTTATGAGAAAAACTTGTCTCCTTAGCTAAGGAGGCAATGTTGGAAAAATTATAATTAGTTTTTTATTTAATTATAATTATTTATTAAGTGGTCCATGTTTTTAGGAAACTACCCCCACACTAGTTTTGTAACTTCCCACTATTTTTTTTTATCCATTTATTTTCTGTTAATGGTAGAGAAAATAATCGATAGATTATTCAGAACACATTACAGAGAATTAAAGAGAGTTTTTACAGAGAACTCTGTTGGATTTCTACTCTTGGTCCCCTATGCCCACTTTTACATTAATAAACCACACCATTTGAGTTAGGAAGAGTGAGGGTCTAGAAGAACTAAGAACTCCGCGGCCGATGTGTTTATTGTAGTTCCAGGTCAAATTGTCATTCGTCGATTACCAAAAACAATGGTGGGAGGTATACGCTTTATTATTTTTAATTACGTTTCCGCTGCAGGTGATTAAATTTGTTAATTACATTTTATTATAGCAAAAGCTCAAATTGTTATTACAGTTTTCTTGTTAGCCCAGTTGTTAGCTTACCTGAGAGTTTGTTAAAAGAGTTTGTTAAAACATCTCTCTATATAACGAGGATGTACTTTGCTAATTCAAATAACAAAAAATTCAAGATTGCATTTTACCCATTTTCATCTTATATGGTATCAGAGCAGCTTCCGAGCATGCTCTTCTCTTTCCTATGATTTTCATCCAAAACAATTAAGCCTCGAAGCTTTATTCGTCTTCAATGGCTGACAAATCAAACTCTAGCAATGTCGATGTACCAGATCTGGATTCGCAACTCAATCCCTCAGATTCGCAACTCAATCCCTCAGATTCGCAACTCAATCCTTTGGATCTGCAACTCAATCCATTTTTGATGCATCATTCGTACACTGCAACATCGATACTAGTCAATCAGCCCCTCATCGGAGCCGATAACTATAATTCATGGAAGCGAGCTTTCCTCATAGCTCTTGCAGGGAAGAATAAGGAAGGATTCGTGAACGGATCCATTGAAAAACCGAAGAATGAGAAACTTATAGCATCCTGGAAATGTAACAATCACATAATCACTTCTTGGATTCTGAACTCTGTTTCTAAAGAGATTGCAGCAAGTATAATTTGTACAGGCACTGCAAAAGATGTTTGGGACGAACTTGCTGAACGATTCAAACGCATCTTTCAACTAAGGAAAGAACTAGCGAATATCACTCAAGGAACAATGACGATAGAGGCTTACTTCACGAAGATCAAAACGGTATGGCAAGATCTCATTGAATTCCGTCCTGATGTTGAATGTACTTGTGGTGCTCTCAAACCTTTCATCGAACACCTTAACAGCGAGTACGTTATGATATTTCTTATGGGTCTTAATGAGACCTATGCTGCTGTAAGAACACAGATTCTTTTGATGGAGCCCTTACCTTCCATCAACAAAGCCTTTTCGCTTATTGTACAAGAAGAACGACAGAGAATTATTGGAAATTCCTCAAAGGAAGTCATCACCTTGATGGCTTACAACAATACGAAGAAAAATAGTGTTGACAATTCAAACAAAAGGAGAGAGACGATCAAATCTGTCTGTACTCACTGTGGATTCAAAGGCCACACCACCGATAAGTGCTATAGGATTCATGGATTTCCTCCTGGGTTCAAAAGCCGAAGGAACATCAATGAGAATGGTTCTCAGAATGCAGGAACAAACTCAGTATCACAGGGTTCGTCTAGTTTTTTGGACAATCTTGATAAGAATCAATGCACCCAGTTAATTGAAATGCTTAATTCTCGATTGCAAGATGAAAAGAAGACTGCCATAGCCTCTGCAGTAAACCACATTTCAGGTATAAACTCAGTTTCTTTATCAAAATCTCCAAATTCTTGGATATTAGATTCTGGTGCATCAAAGCATATCTGCTTCAATAGACAATCATTTACTAACCTTCATAGTATAAATGATATGAGTATAGTTCTACCTAATAATTTTCGTGTGAATGTTGAGTTTGTTGGAGATGTACAAATAAATTCAAGACTAATTCTACATGATGTTCTGCTGGTCCCTCAGTTTACCTATAACTTGATATCAGTCAGTTGTCTGTTAGCTTCCAATGATATAGCATTGGATTTTTCTGGAAAATGTTGCATTCTGCAGGACAAGAAGAATTTTCAGATGATTGGCAAGGCTGATTGTACAAATGGCTTATACATCCTGGATTCTTGCATTAGTTCTATTGCTTGTTCAGTAACAGTTGATATTTGGCATAGAAGATTGGGACACTTATCATAAAAAAGGCTCGAGTTAATGAAGGACCAATTACAATATTCAGAACATCCTTCTAAGCATTGTGATATCTGTCCCCTAGCTAAACAAAAAAGGCTATGTTTTCCCTTTAACAACAATGTAGCAAAGAATGTTTTCGATTTAATACATTGTGATATATGGGGACCCTTTAAAGTTCCAACATATAAAGGATATAAATACTTCCTTACCATTGTAGATGATTGTTCTCGATACACTTAGGTTTTTCTTATGACCTCTAAGAGTGATGCTCTTCATATTGTGCCTAACTTTTTTAAGCTAGTTGAGACACAATTTTCTAAGAAAATAAAATTGTTTAGATCTGACAATGCTCATGAGCTCAAGTTTACAGAATTTTTTGCTTCAGTTGGAACGCTGCATCAATTTTCTTGTGTAGAAACTCCTCAACAAAATTCTGTTGTAGAAAGAAAACACCAACATCTTTTAAATGTTGCTAGGTCTCTATATTTCCAATCCCAAGTTCCTTTAAGATTTTGAGGAGATTGCATCCTTATAGCAACCTACATTGTTAATAGAATCCCTATGCCTCTTCTAAACAATGAAACTCCATATTCTATCCTGCATCAACAAGAGGCAAACTATTCTGATCTTAAGTCCTTCGGATGTTTATGTTATGCTTCCACTTTAAAAGCAAATAGAGGTAAGTTTGATGCAAGAGCCAGCAGATGTGCTTTCATTGGCTATCCTCCAGAGGTAAAAGGATACAAAGTGTATGACATGAAAACCAAGCAGATCTTTATTTCAAGGGATGTAGTTTTTTTTTTAAAACTCTTATCCTTTTCATGTCTTAAGCACAGAAGAAAAAGACTCAGTAGATGATATCTTTGCAGAAACTATCCTTCCTTTACCAATAATCTCTCCTGAGGTCCAGGGACAATACATAAATATACAAGGATTACCCACTCTTAATCAAGGTTTTCCTACTGCTGATGCCACTATTGATGAGATAAACACAGTGAATCAAAATGATGACTGCAACATTGATTGCTCACAAGAAACTGACATTTTTGCTCATGAACATTCTGATCAGCAAGCCTTAAATGAGAACATTGATTCCTTGTCTCTGCAAAACAACCTTTGTGAAGTCCCTAATATAGATCAGTCTGGCGTTCAAAGTGGAGAACAACCAGAGACAACAAACATGAATCAATTTGAGATGCACGAAGTTGAACAGATTGTTGGGAATCCTCATGAGTCTTCTTCAAGTAGTAATCATGATGGGTATCATGAAAATCTGGAACAAGTCTTAATTCAACCAACCATAGATCCTGCTGTATCACAACTTAGAAGGTCTTCAAGAACTCATAAACCTCCTGGTTTTCTCCAAGATTATCACTGTAACATGCTGCTTCACAAGAATAATCAATCTACTGGTCAGTACTCCATACATAAATTTTTGTGTTATGACAAATTGAGACCAGCCTATCAAAACTACATATTGAATGTCTCAATGATTTTTGAACCTTCATATTATCATCAAGCTATAAAATTCCAGCATTGGAAAAGTGCAATGGATGAAGAGATAGCTGCCTTGGAGAAAAATAATACTTGGACTATTGTCCCCTTACCTTCGGGACATCACTCAATAAGTTGCAAATGGGTATATTGAGTAAAATACAAACCTGATGGCTCTGTTGACCGCTTTAAGGCTCGACTTGTAGCAAGAGGTTTTAATCAGCAAGAAGGAGTTGATTTCCTAGAAACATTCTCTCCCGTTGCAAAAATTGTAACAGTTCGCTTATTCATTGCTATATCTGCCTCTTTCGGGTGGAATATTTTTCAAATGGATGTCAACAATGCCTTTTTAAATGGAGACTTGTTTGAAGAAGTATATATGACTCTTCCTATTGGATACTATCCTCAGAGAAATGATTCAACAACCACACCTATGGTTTGTAAGCTTCAAAAATCTATTTATGGACTTAAACAAGCTTCAAGACAATGGTTTCACAAGTTTTCTTGTGTTTTATTGTCCTCTGGTTTTTCCCAATCGAAGGCAGATTATTCACTCTTCACAAAGGGAAGCAAAGAGACATTTGTTGCATTGCTTGTATATGTGGATGACATTCTTATAACTGGCCCATGTTCAGCTGAAGTAAACAAGGTAAAAATGATGTTAAAACATCATTTTTCATTGAAAGATCTTGGAAGAGCAGCCTATTTTCTAGGCCTCGAATTATCTCGAACATCTCAAGGAATTTATATCACACAAAGAAAGTATTGTCTCCAGATATTGGAAGATCATGGTTTGCTTGCCTCTAAACCAGTTTCTCAACCAATGACTCCAAATATCAAACTGGCAGCTACAACAGGAGAATTACTTAGCAGTGTTGAAACAACCAACTTCAGAAGGATTATTGGCAGATTGATTTATCTGCAAATTTCCAGGCCTGATATCACCTATCCAGTTCACAAATTAAGTCAATTTCTAGCAAAACCTACCACTGAGCACATGAAGGCAGCAGTTTACTTGTTAAGATATCTAAAAGGCACACCTGGACAAGGAATTTTACTACATGCTCACACTGATTTCCACTTAAAAGCTTTTGTCGACGCTGACTGGGGAGCATGCCTCGATTCACGACGGTCTACAACAGGCTTTTGTATATTTCTTGGAAAATCCATGATATCGTGGAAATCAAAGAAGCAATCTACAGTATCTAGATCCTCAGCAGAAGCTGAATATCGAGCTTTAGCAGGAATAACAAGTGAAGTTACTTGGTTATGTAGTCTTATGAAAGATCTACTCATCACACCAAGACATCCCATAGTCATTTTCTGTGATAATCTAGCAGCTATCTCAATAGCTTCAAATCCAACCTTTCATGAAAGAACAAAACATATAGAGATTGATTGTCATTTTGTAAGGGAAAAGATAGAGAAAGGCCTTATTAAGCTGCTTCCAATCCGTTCAAAATCTCAGTTAGATGACATGTTC

mRNA sequence

AAAAAAAGAAAGATTTCAAGATGGAGACTGAACCTCCTCCTCTTCCTCCCGTTCCTCTTCCTCACCCTCCTCTTCCTCATATTGTGGATATTGAGCCTCTTGCTCCTCGCGTCCCTCCTCCTCCTGCGGCTTTCGAGATTGAACCTCCTCCTGCTGTAGAGAAACAAATTTGGCTTCAATTTCTTGATGTTATACTTGACATGGCAATCGTGATCATACAAAAAGAGAACCCTTATGTCAAAGTACAAGACCTCCGATACTGCTCCATCTCGAGTATTCGATTTCAATTTGGGTATGGTTTTTTCTACTCGTATACAATAGTAAACTTAGTTTCTTTTTATAAAAAAAATCGATGAAATAATTTTAATAGTTAAATTAAATGAACCCACTAAAATTAACAATCGTACATTTAAGGAAAAAAATTAAAATAATGTATGTGAACTTTTTTTTAGTTAGTATAATTAGACTGACATAATAAATGTTTTAATGATCAAAACGTATTTGAACTAATGAATTTGATTTTGTCGATATAAATTTATGAGAAAAACTTGTCTCCTTAGCTAAGGAGGCAATGTTGGAAAAATTATAATTAGTTTTTTATTTAATTATAATTATTTATTAAGTGGTCCATGTTTTTAGGAAACTACCCCCACACTAGTTTTGTAACTTCCCACTATTTTTTTTTATCCATTTATTTTCTGTTAATGGTAGAGAAAATAATCGATAGATTATTCAGAACACATTACAGAGAATTAAAGAGAGTTTTTACAGAGAACTCTGTTGGATTTCTACTCTTGGTCCCCTATGCCCACTTTTACATTAATAAACCACACCATTTGAGTTAGGAAGAGTGAGGGTCTAGAAGAACTAAGAACTCCGCGGCCGATGTGTTTATTGTAGTTCCAGGTCAAATTGTCATTCGTCGATTACCAAAAACAATGGTGGGAGGTATACGCTTTATTATTTTTAATTACGTTTCCGCTGCAGGTGATTAAATTTGTTAATTACATTTTATTATAGCAAAAGCTCAAATTGTTATTACAGTTTTCTTGTTAGCCCAGTTGTTAGCTTACCTGAGAGTTTGTTAAAAGAGTTTGTTAAAACATCTCTCTATATAACGAGGATGTACTTTGCTAATTCAAATAACAAAAAATTCAAGATTGCATTTTACCCATTTTCATCTTATATGGTATCAGAGCAGCTTCCGAGCATGCTCTTCTCTTTCCTATGATTTTCATCCAAAACAATTAAGCCTCGAAGCTTTATTCGTCTTCAATGGCTGACAAATCAAACTCTAGCAATGTCGATGTACCAGATCTGGATTCGCAACTCAATCCCTCAGATTCGCAACTCAATCCCTCAGATTCGCAACTCAATCCTTTGGATCTGCAACTCAATCCATTTTTGATGCATCATTCGTACACTGCAACATCGATACTAGTCAATCAGCCCCTCATCGGAGCCGATAACTATAATTCATGGAAGCGAGCTTTCCTCATAGCTCTTGCAGGGAAGAATAAGGAAGGATTCGTGAACGGATCCATTGAAAAACCGAAGAATGAGAAACTTATAGCATCCTGGAAATGTAACAATCACATAATCACTTCTTGGATTCTGAACTCTGTTTCTAAAGAGATTGCAGCAAGTATAATTTGTACAGGCACTGCAAAAGATGTTTGGGACGAACTTGCTGAACGATTCAAACGCATCTTTCAACTAAGGAAAGAACTAGCGAATATCACTCAAGGAACAATGACGATAGAGGCTTACTTCACGAAGATCAAAACGGTATGGCAAGATCTCATTGAATTCCGTCCTGATGTTGAATGTACTTGTGGTGCTCTCAAACCTTTCATCGAACACCTTAACAGCGAGTACGTTATGATATTTCTTATGGGTCTTAATGAGACCTATGCTGCTGTAAGAACACAGATTCTTTTGATGGAGCCCTTACCTTCCATCAACAAAGCCTTTTCGCTTATTGTACAAGAAGAACGACAGAGAATTATTGGAAATTCCTCAAAGGAAGTCATCACCTTGATGGCTTACAACAATACGAAGAAAAATAGTGTTGACAATTCAAACAAAAGGAGAGAGACGATCAAATCTGTCTGTACTCACTGTGGATTCAAAGGCCACACCACCGATAAGTGCTATAGGATTCATGGATTTCCTCCTGGGTTCAAAAGCCGAAGGAACATCAATGAGAATGGTTCTCAGAATGCAGGAACAAACTCAGTATCACAGGGTTCGTCTAGTTTTTTGGACAATCTTGATAAGAATCAATGCACCCAGTTAATTGAAATGCTTAATTCTCGATTGCAAGATGAAAAGAAGACTGCCATAGCCTCTGCAGTAAACCACATTTCAGGTATAAACTCAGTTTCTTTATCAAAATCTCCAAATTCTTGGATATTAGATTCTGGTGCATCAAAGCATATCTGCTTCAATAGACAATCATTTACTAACCTTCATAGTATAAATGATATGAGTATAGTTCTACCTAATAATTTTCGTGTGAATGTTGAGTTTGTTGGAGATGTACAAATAAATTCAAGACTAATTCTACATGATGTTCTGCTGGTCCCTCAGTTTACCTATAACTTGATATCAGTCAGTTGTCTGTTAGCTTCCAATGATATAGCATTGGATTTTTCTGGAAAATGTTGCATTCTGCAGGACAAGAAGAATTTTCAGATGATTGGCAAGGCTGATTGTACAAATGGCTTATACATCCTGGATTCTTGCATTAGTTCTATTGCTTGTTCAGTAACAGTTGATATTTGGCATAGAAGATTGGGACACTTATCATAAAAAAGGCTCGAGTTAATGAAGGACCAATTACAATATTCAGAACATCCTTCTAAGCATTGTGATATCTGTCCCCTAGCTAAACAAAAAAGGCTATGTTTTCCCTTTAACAACAATGTAGCAAAGAATGTTTTCGATTTAATACATTGTGATATATGGGGACCCTTTAAAGTTCCAACATATAAAGGATATAAATACTTCCTTACCATTGTAGATGATTGTTCTCGATACACTTAGGTTTTTCTTATGACCTCTAAGAGTGATGCTCTTCATATTGTGCCTAACTTTTTTAAGCTAGTTGAGACACAATTTTCTAAGAAAATAAAATTGTTTAGATCTGACAATGCTCATGAGCTCAAGTTTACAGAATTTTTTGCTTCAGTTGGAACGCTGCATCAATTTTCTTGTGTAGAAACTCCTCAACAAAATTCTGTTGTAGAAAGAAAACACCAACATCTTTTAAATGTTGCTAGGTCTCTATATTTCCAATCCCAAGTTCCTTTAAGATTTTGAGGAGATTGCATCCTTATAGCAACCTACATTGTTAATAGAATCCCTATGCCTCTTCTAAACAATGAAACTCCATATTCTATCCTGCATCAACAAGAGGCAAACTATTCTGATCTTAAGTCCTTCGGATGTTTATGTTATGCTTCCACTTTAAAAGCAAATAGAGGTAAGTTTGATGCAAGAGCCAGCAGATGTGCTTTCATTGGCTATCCTCCAGAGGTAAAAGGATACAAAGTGTATGACATGAAAACCAAGCAGATCTTTATTTCAAGGGATGTAGTTTTTTTTTTAAAACTCTTATCCTTTTCATGTCTTAAGCACAGAAGAAAAAGACTCAGTAGATGATATCTTTGCAGAAACTATCCTTCCTTTACCAATAATCTCTCCTGAGGTCCAGGGACAATACATAAATATACAAGGATTACCCACTCTTAATCAAGGTTTTCCTACTGCTGATGCCACTATTGATGAGATAAACACAGTGAATCAAAATGATGACTGCAACATTGATTGCTCACAAGAAACTGACATTTTTGCTCATGAACATTCTGATCAGCAAGCCTTAAATGAGAACATTGATTCCTTGTCTCTGCAAAACAACCTTTGTGAAGTCCCTAATATAGATCAGTCTGGCGTTCAAAGTGGAGAACAACCAGAGACAACAAACATGAATCAATTTGAGATGCACGAAGTTGAACAGATTGTTGGGAATCCTCATGAGTCTTCTTCAAGTAGTAATCATGATGGGTATCATGAAAATCTGGAACAAGTCTTAATTCAACCAACCATAGATCCTGCTGTATCACAACTTAGAAGGTCTTCAAGAACTCATAAACCTCCTGGTTTTCTCCAAGATTATCACTGTAACATGCTGCTTCACAAGAATAATCAATCTACTGGTCAGTACTCCATACATAAATTTTTGTGTTATGACAAATTGAGACCAGCCTATCAAAACTACATATTGAATGTCTCAATGATTTTTGAACCTTCATATTATCATCAAGCTATAAAATTCCAGCATTGGAAAAGTGCAATGGATGAAGAGATAGCTGCCTTGGAGAAAAATAATACTTGGACTATTGTCCCCTTACCTTCGGGACATCACTCAATAAGTTGCAAATGGGTATATTGAGTAAAATACAAACCTGATGGCTCTGTTGACCGCTTTAAGGCTCGACTTGTAGCAAGAGGTTTTAATCAGCAAGAAGGAGTTGATTTCCTAGAAACATTCTCTCCCGTTGCAAAAATTGTAACAGTTCGCTTATTCATTGCTATATCTGCCTCTTTCGGGTGGAATATTTTTCAAATGGATGTCAACAATGCCTTTTTAAATGGAGACTTGTTTGAAGAAGTATATATGACTCTTCCTATTGGATACTATCCTCAGAGAAATGATTCAACAACCACACCTATGGTTTGTAAGCTTCAAAAATCTATTTATGGACTTAAACAAGCTTCAAGACAATGGTTTCACAAGTTTTCTTGTGTTTTATTGTCCTCTGGTTTTTCCCAATCGAAGGCAGATTATTCACTCTTCACAAAGGGAAGCAAAGAGACATTTGTTGCATTGCTTGTATATGTGGATGACATTCTTATAACTGGCCCATGTTCAGCTGAAGTAAACAAGGTAAAAATGATGTTAAAACATCATTTTTCATTGAAAGATCTTGGAAGAGCAGCCTATTTTCTAGGCCTCGAATTATCTCGAACATCTCAAGGAATTTATATCACACAAAGAAAGTATTGTCTCCAGATATTGGAAGATCATGGTTTGCTTGCCTCTAAACCAGTTTCTCAACCAATGACTCCAAATATCAAACTGGCAGCTACAACAGGAGAATTACTTAGCAGTGTTGAAACAACCAACTTCAGAAGGATTATTGGCAGATTGATTTATCTGCAAATTTCCAGGCCTGATATCACCTATCCAGTTCACAAATTAAGTCAATTTCTAGCAAAACCTACCACTGAGCACATGAAGGCAGCAGTTTACTTGTTAAGATATCTAAAAGGCACACCTGGACAAGGAATTTTACTACATGCTCACACTGATTTCCACTTAAAAGCTTTTGTCGACGCTGACTGGGGAGCATGCCTCGATTCACGACGGTCTACAACAGGCTTTTGTATATTTCTTGGAAAATCCATGATATCGTGGAAATCAAAGAAGCAATCTACAGTATCTAGATCCTCAGCAGAAGCTGAATATCGAGCTTTAGCAGGAATAACAAGTGAAGTTACTTGGTTATGTAGTCTTATGAAAGATCTACTCATCACACCAAGACATCCCATAGTCATTTTCTGTGATAATCTAGCAGCTATCTCAATAGCTTCAAATCCAACCTTTCATGAAAGAACAAAACATATAGAGATTGATTGTCATTTTGTAAGGGAAAAGATAGAGAAAGGCCTTATTAAGCTGCTTCCAATCCGTTCAAAATCTCAGTTAGATGACATGTTC

Coding sequence (CDS)

ATGGCTGACAAATCAAACTCTAGCAATGTCGATGTACCAGATCTGGATTCGCAACTCAATCCCTCAGATTCGCAACTCAATCCCTCAGATTCGCAACTCAATCCTTTGGATCTGCAACTCAATCCATTTTTGATGCATCATTCGTACACTGCAACATCGATACTAGTCAATCAGCCCCTCATCGGAGCCGATAACTATAATTCATGGAAGCGAGCTTTCCTCATAGCTCTTGCAGGGAAGAATAAGGAAGGATTCGTGAACGGATCCATTGAAAAACCGAAGAATGAGAAACTTATAGCATCCTGGAAATGTAACAATCACATAATCACTTCTTGGATTCTGAACTCTGTTTCTAAAGAGATTGCAGCAAGTATAATTTGTACAGGCACTGCAAAAGATGTTTGGGACGAACTTGCTGAACGATTCAAACGCATCTTTCAACTAAGGAAAGAACTAGCGAATATCACTCAAGGAACAATGACGATAGAGGCTTACTTCACGAAGATCAAAACGGTATGGCAAGATCTCATTGAATTCCGTCCTGATGTTGAATGTACTTGTGGTGCTCTCAAACCTTTCATCGAACACCTTAACAGCGAGTACGTTATGATATTTCTTATGGGTCTTAATGAGACCTATGCTGCTGTAAGAACACAGATTCTTTTGATGGAGCCCTTACCTTCCATCAACAAAGCCTTTTCGCTTATTGTACAAGAAGAACGACAGAGAATTATTGGAAATTCCTCAAAGGAAGTCATCACCTTGATGGCTTACAACAATACGAAGAAAAATAGTGTTGACAATTCAAACAAAAGGAGAGAGACGATCAAATCTGTCTGTACTCACTGTGGATTCAAAGGCCACACCACCGATAAGTGCTATAGGATTCATGGATTTCCTCCTGGGTTCAAAAGCCGAAGGAACATCAATGAGAATGGTTCTCAGAATGCAGGAACAAACTCAGTATCACAGGGTTCGTCTAGTTTTTTGGACAATCTTGATAAGAATCAATGCACCCAGTTAATTGAAATGCTTAATTCTCGATTGCAAGATGAAAAGAAGACTGCCATAGCCTCTGCAGTAAACCACATTTCAGGTATAAACTCAGTTTCTTTATCAAAATCTCCAAATTCTTGGATATTAGATTCTGGTGCATCAAAGCATATCTGCTTCAATAGACAATCATTTACTAACCTTCATAGTATAAATGATATGAGTATAGTTCTACCTAATAATTTTCGTGTGAATGTTGAGTTTGTTGGAGATGTACAAATAAATTCAAGACTAATTCTACATGATGTTCTGCTGGTCCCTCAGTTTACCTATAACTTGATATCAGTCAGTTGTCTGTTAGCTTCCAATGATATAGCATTGGATTTTTCTGGAAAATGTTGCATTCTGCAGGACAAGAAGAATTTTCAGATGATTGGCAAGGCTGATTGTACAAATGGCTTATACATCCTGGATTCTTGCATTAGTTCTATTGCTTGTTCAGTAACAGTTGATATTTGGCATAGAAGATTGGGACACTTATCATAA

Protein sequence

MADKSNSSNVDVPDLDSQLNPSDSQLNPSDSQLNPLDLQLNPFLMHHSYTATSILVNQPLIGADNYNSWKRAFLIALAGKNKEGFVNGSIEKPKNEKLIASWKCNNHIITSWILNSVSKEIAASIICTGTAKDVWDELAERFKRIFQLRKELANITQGTMTIEAYFTKIKTVWQDLIEFRPDVECTCGALKPFIEHLNSEYVMIFLMGLNETYAAVRTQILLMEPLPSINKAFSLIVQEERQRIIGNSSKEVITLMAYNNTKKNSVDNSNKRRETIKSVCTHCGFKGHTTDKCYRIHGFPPGFKSRRNINENGSQNAGTNSVSQGSSSFLDNLDKNQCTQLIEMLNSRLQDEKKTAIASAVNHISGINSVSLSKSPNSWILDSGASKHICFNRQSFTNLHSINDMSIVLPNNFRVNVEFVGDVQINSRLILHDVLLVPQFTYNLISVSCLLASNDIALDFSGKCCILQDKKNFQMIGKADCTNGLYILDSCISSIACSVTVDIWHRRLGHLS
Homology
BLAST of Sed0003227 vs. NCBI nr
Match: KAA0065480.1 (Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa] >TYK08721.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa])

HSP 1 Score: 479.2 bits (1232), Expect = 4.5e-131
Identity = 248/522 (47.51%), Postives = 352/522 (67.43%), Query Frame = 0

Query: 15  LDSQLNPSDSQLNPSDSQLNPLDLQLNPFLMHHSYTATSILVNQPLIGADNYNSWKRAFL 74
           +++Q + + S+ +P  +  +  D QLNP+ +HHS   T+ +V QPL GA NY SW RA L
Sbjct: 1   MENQSSTNGSRFDPLTAANSQNDAQLNPYFIHHSLGPTAAIVTQPLTGAINYTSWSRAML 60

Query: 75  IALAGKNKEGFVNGSIEKPKNEKLIASWKCNNHIITSWILNSVSKEIAASIICTGTAKDV 134
           +A++G+NK GF+ G I+KP +  L+ +W CNN I+ SWILNSVSKEIAASII  G+ K++
Sbjct: 61  MAISGRNKAGFITGKIQKPSDGVLLDAWICNNDILASWILNSVSKEIAASIIYIGSIKEI 120

Query: 135 WDELAERFKR-----IFQLRKELANITQGTMTIEAYFTKIKTVWQDLIEFRPDVECTCGA 194
           WDEL +RFK+     I+QLRKE   + QG +TIE Y+TK+KT+WQ+L E+R   +CTCG 
Sbjct: 121 WDELRQRFKQSNGPSIYQLRKEFVTLRQGNLTIETYYTKLKTIWQNLNEYRFTNDCTCGG 180

Query: 195 LKPFIEHLNSEYVMIFLMGLNETYAAVRTQILLMEPLPSINKAFSLIVQEERQRIIGNSS 254
           LKPFI+HL SEY+M FLMGLN++YAAVR QILLM+PLPSIN  FSL++QEE+QR  G  +
Sbjct: 181 LKPFIDHLESEYIMAFLMGLNDSYAAVRAQILLMQPLPSINTVFSLLIQEEQQRSAGILT 240

Query: 255 KEVITLMAYNNTKKNSVDNSNKRRETIKSVCTHCGFKGHTTDKCYRIHGFPPGFKSRR-N 314
             +  +    N   +   ++++ R+  +  C++CG KGH  DKCY+ HG+PPG+K R  N
Sbjct: 241 PPIDPVAL--NIASSMAISTDRNRKKERPTCSYCGIKGHIADKCYKKHGYPPGYKPRNSN 300

Query: 315 INENGSQNAGTNSVSQGSSS-------FLDNLDKNQCTQLIEMLNSRLQDEKKTAI--AS 374
                   + TN+V+  +S+       F  +L+  Q +QL+ +LN+ LQ      I  A+
Sbjct: 301 SITTAPDTSKTNNVANTNSAAANRSPDFFSSLNSEQYSQLMTLLNNHLQAATTAPITTAT 360

Query: 375 AVNHISGINSVSL--SKSPNSWILDSGASKHICFNRQSFTNLHSINDMSIVLPNNFRVNV 434
           A+ H SGI +++   ++S + WI+DSGAS+HIC ++  F N    N+M ++LPN  R++V
Sbjct: 361 AITHTSGIFALTSHNNQSHDEWIIDSGASRHICHDKSLFKNWSHTNNMFVMLPNGHRISV 420

Query: 435 EFVGDVQINSRLILHDVLLVPQFTYNLISVSCLLASNDIALDFSGKCCILQDKKNFQMIG 494
           + +GD+QIN  L L DVL V QF YNLISVSCLL + +I+LDF   CCI+QD     MIG
Sbjct: 421 DLIGDIQINGSLTLKDVLFVSQFAYNLISVSCLLITKNISLDFQSTCCIIQDLSRPMMIG 480

Query: 495 KADCTNGLYILD-----SCISS--IACSVTVDIWHRRLGHLS 513
           KA C NGLY+L+     +CI++     +++VD WH+RLGHLS
Sbjct: 481 KASCQNGLYVLNKEANTNCIAAGVKINAISVDTWHQRLGHLS 520

BLAST of Sed0003227 vs. NCBI nr
Match: XP_022145891.1 (uncharacterized protein LOC111015239 [Momordica charantia])

HSP 1 Score: 353.6 bits (906), Expect = 2.9e-93
Identity = 186/364 (51.10%), Postives = 250/364 (68.68%), Query Frame = 0

Query: 36  LDLQLNPFLMHHSYTATSILVNQPLIGADNYNSWKRAFLIALAGKNKEGFVNGSIEKPKN 95
           ++ QLNP+L+HHS   T++LV Q L+GA NYNSW R+ LIAL+GKNK GF++G+I+KP N
Sbjct: 21  IESQLNPYLIHHSTAPTTMLVTQQLLGASNYNSWCRSMLIALSGKNKVGFIDGTIKKP-N 80

Query: 96  EKLIASWKCNNHIITSWILNSVSKEIAASIICTGTAKDVWDELAERFK-----RIFQLRK 155
             L+A+WKCNN IITSWI+NSVSKEIAASII TG+AKD+WDEL ERF+     RIFQLRK
Sbjct: 81  GNLLAAWKCNNDIITSWIINSVSKEIAASIIYTGSAKDIWDELKERFQQSDAPRIFQLRK 140

Query: 156 ELANITQGTMTIEAYFTKIKTVWQDLIEFRPDVECTCGALKPFIEHLNSEYVMIFLMGLN 215
           EL    QGT++IEAY+TK+KTVWQ+L ++RP ++CTC  LK   E   SEYVM FLMGLN
Sbjct: 141 ELVTTIQGTLSIEAYYTKLKTVWQELTDYRPTIDCTCSGLKSLSEFFQSEYVMTFLMGLN 200

Query: 216 ETYAAVRTQILLMEPLPSINKAFSLIVQEERQRIIG--NSSKEVITLMAYNNTKKNSVDN 275
           E+YA +R QILLM+P+P +NK FSL++QEERQR IG  N     + +     +K+NS   
Sbjct: 201 ESYAKIRAQILLMDPIPPMNKVFSLLIQEERQRAIGTINPPLPSMAMAVAEISKRNSA-- 260

Query: 276 SNKRRETIKSVCTHCGFKGHTTDKCYRIHGFPPGFKSRRNI-------NENGSQNAG--- 335
           +  RR+  +S CTHCG +GH  DKCY++HG+PPG+++           N NG+ ++    
Sbjct: 261 TQFRRKDNRSFCTHCGLRGHVIDKCYKLHGYPPGYRANNPAARIGQLHNPNGTSHSNGVV 320

Query: 336 TNSVSQ----------------GSSSFLDNLDKNQCTQLIEMLNSRLQDEKKTAIASAVN 367
            N VS+                 S +F ++L+ +Q +QL+EML S LQ  K   I + +N
Sbjct: 321 ANQVSEKNVDITSSPAIQRPSNSSPAFFNSLNSSQYSQLMEMLQSHLQAAKPETI-TPMN 380

BLAST of Sed0003227 vs. NCBI nr
Match: XP_012833844.1 (PREDICTED: uncharacterized protein LOC105954710 [Erythranthe guttata])

HSP 1 Score: 349.4 bits (895), Expect = 5.4e-92
Identity = 210/535 (39.25%), Postives = 316/535 (59.07%), Query Frame = 0

Query: 34  NPLDLQLNPFLMHHSYTATSILVNQPLIGADNYNSWKRAFLIALAGKNKEGFVNGSIEKP 93
           +PLD   +P  +H S     ILV+Q L+  DNY SW RA  I+L  KNK GF++G+I +P
Sbjct: 7   SPLDDVSHPMFLHPSDGPNLILVSQ-LLTEDNYASWSRAMTISLTVKNKIGFIDGTISEP 66

Query: 94  KNEKLIA--SWKCNNHIITSWILNSVSKEIAASIICTGTAKDVWDELAERFK-----RIF 153
             ++LI   +W  NN+I+ SWI+NSVSK+I  SI+ + ++K++WD+L  RF      RIF
Sbjct: 67  PADELIMRNAWIRNNNIVMSWIINSVSKDIQGSIMYSNSSKEIWDDLKTRFSQTNGPRIF 126

Query: 154 QLRKELANITQGTMTIEAYFTKIKTVWQDLIEFRPDV---ECTCGALKPFIEHLNSEYVM 213
           QLR++LAN+TQG+ ++  YFTK+K +W +L  +RP     +C CG  +    H N EYVM
Sbjct: 127 QLRRDLANLTQGSQSVNVYFTKVKAIWDELANYRPCCSCGKCDCGGFEKLQAHYNQEYVM 186

Query: 214 IFLMGLNETYAAVRTQILLMEPLPSINKAFSLIVQEERQRIIGNS--SKEVITLMAYNNT 273
            FLMGLN++ A+ R QILLM+PLP I+K F+ I QEERQR + +S            N  
Sbjct: 187 SFLMGLNDSLASTRGQILLMDPLPPISKVFAFISQEERQRSVVSSHVDSSGSVFSVKNEG 246

Query: 274 KKNSVDN-----SNKRRETIKSVCTHCGFKGHTTDKCYRIHGFPPGFKSRR-----NIN- 333
            K S++N       K+RE  +S CTHC  +GHT +KCY++HG+PP +K ++     ++N 
Sbjct: 247 FKRSINNQFYNPGLKKRE--RSFCTHCNMQGHTVEKCYKLHGYPPSYKPQKSRFSSHVNQ 306

Query: 334 --------ENGSQNAGTNSVSQGSSSFLDNLDKNQCTQLIEMLNSRLQDEKKTAIAS--- 393
                   ++ S +AG +  SQ    +L ++  +QC Q + M +S +  +++ + AS   
Sbjct: 307 VSGFDSSLDSHSSDAGVS--SQQVDGYLQSMTPSQCQQFMSMFSSHMAAQQQQSTASIQP 366

Query: 394 ---------AVNHISGINSVS--LSKSPNSWILDSGASKHICFNRQSFTNLHSINDMSIV 453
                     V+ ++GI ++S   S S   WILDSGASKHIC ++Q F N+  +++  ++
Sbjct: 367 QSAHGADTATVSCVTGICALSGVPSLSSADWILDSGASKHICHDKQLFINIRPVSNFRVL 426

Query: 454 LPNNFRVNVEFVGDVQINSRLILHDVLLVPQFTYNLISVSCLLASNDIALDFSGKCCILQ 512
           LP++  + V FVGDV+++  + L  V  VPQF +NLISVS  L +N   + FS    ++Q
Sbjct: 427 LPDSSVLIVSFVGDVRLSKEIFLTGVFYVPQFKFNLISVSAFLQNNQFFIGFSAFTFVIQ 486

BLAST of Sed0003227 vs. NCBI nr
Match: XP_012857659.1 (PREDICTED: uncharacterized protein LOC105976934 [Erythranthe guttata])

HSP 1 Score: 344.4 bits (882), Expect = 1.7e-90
Identity = 206/533 (38.65%), Postives = 309/533 (57.97%), Query Frame = 0

Query: 41  NPFLMHHSYTATSILVNQPLIGADNYNSWKRAFLIALAGKNKEGFVNGSIEKPKNEK--L 100
           +P+ +H S     +LV+  L+  DNY +W RA +I+L  KNK GF++GSI KP  ++  L
Sbjct: 12  SPYYLHPSDGPGLVLVSS-LLREDNYAAWNRAMMISLTVKNKLGFIDGSITKPPADEALL 71

Query: 101 IASWKCNNHIITSWILNSVSKEIAASIICTGTAKDVWDELAERFK-----RIFQLRKELA 160
           + +W  NN I+ SWILN++S +I AS++ + +A D+W++L  RF      RIFQLR+ELA
Sbjct: 72  LNAWVRNNSIVISWILNAISPDIQASVMYSESAHDIWNDLKIRFSQTNGPRIFQLRRELA 131

Query: 161 NITQGTMTIEAYFTKIKTVWQDLIEFRPDV---ECTCGALKPFIEHLNSEYVMIFLMGLN 220
           N+TQ   ++  YFTK+K +W +L  FRP      C+CG +    +H + E+VM FLMGLN
Sbjct: 132 NLTQDQQSVNVYFTKLKAIWDELDNFRPTCTCGRCSCGGVDKLQDHHHIEHVMSFLMGLN 191

Query: 221 ETYAAVRTQILLMEPLPSINKAFSLIVQEERQRIIG-NSSKEVITLMAY----------- 280
           ++ A+ R QILLM+PLP INK F+L+ QEER R +   SS +V   +A+           
Sbjct: 192 DSLASTRGQILLMDPLPPINKVFALVSQEERHRSVAVTSSSDVQHSLAFAARGIQTNQFV 251

Query: 281 NNTKKNSVDNSNKRRETIKSVCTHCGFKGHTTDKCYRIHGFPPGFKSRRN---------- 340
              + N    +  +R+  K  CTHC   GHT +KCYR+HGFPPG++ R+           
Sbjct: 252 RRPQNNQFYGTTSQRKD-KIYCTHCHKTGHTVEKCYRLHGFPPGYQPRQKPGMTSNQSSQ 311

Query: 341 -----------INENGSQNAGTNSVSQGSS-SFLDNLDKNQCTQLIEMLNSRLQDE---- 400
                      ++ + S N+G+ S S  SS +FLD +  +QC QL+  ++S L ++    
Sbjct: 312 TKFAVNQVSDIVHSDASLNSGSLSQSLPSSDNFLDAMTASQCQQLLSYVSSHLANKANQP 371

Query: 401 --KKTAIASAVNHISGINSVSL-------SKSPNSWILDSGASKHICFNRQSFTNLHSIN 460
              K +     +HIS +  + L       S  P+ WILDSGAS+HIC N+  F N+ S++
Sbjct: 372 PHDKNSEIFDTSHISRVTGICLFNALHTPSFMPHHWILDSGASRHICHNKSLFLNMKSVS 431

Query: 461 DMSIVLPNNFRVNVEFVGDVQINSRLILHDVLLVPQFTYNLISVSCLLASNDIALDFSGK 512
           +  +VLP++  V V  +GDVQ+ + L+LH+V  VP+F +NL+SVS LL  +   + F   
Sbjct: 432 NARVVLPDSSMVLVNCIGDVQLTTHLVLHNVFYVPEFKFNLVSVSALLHGSSYVVIFDEF 491

BLAST of Sed0003227 vs. NCBI nr
Match: XP_022856063.1 (uncharacterized protein LOC111377235, partial [Olea europaea var. sylvestris])

HSP 1 Score: 342.4 bits (877), Expect = 6.6e-90
Identity = 203/492 (41.26%), Postives = 296/492 (60.16%), Query Frame = 0

Query: 74  LIALAGKNKEGFVNGSIEKPKN-EKLIASWKCNNHIITSWILNSVSKEIAASIICTGTAK 133
           +I L  KNK GF++GSI KP N +  +++W  NN+I+ SWILNSVSKEI+AS+I + +A 
Sbjct: 2   MIPLFVKNKIGFIDGSIAKPDNSDDQVSNWIRNNNIVISWILNSVSKEISASVIYSESAH 61

Query: 134 DVWDELAERFK-----RIFQLRKELANITQGTMTIEAYFTKIKTVWQDLIEFRPDV---E 193
           D+W +L ERF+     RIFQLR+EL N+TQG +++  YFTK+KT+W++L  +RP     +
Sbjct: 62  DIWIDLKERFQQRNGPRIFQLRRELMNLTQGQLSVGVYFTKLKTIWEELSNYRPICSCGK 121

Query: 194 CTCGALKPFIEHLNSEYVMIFLMGLNETYAAVRTQILLMEPLPSINKAFSLIVQEERQRI 253
           C+CG  K   EH   EYVM FLMGLN+T+A  R Q+LLM+P+PSINK FSL+ QEE QR 
Sbjct: 122 CSCGENKKLSEHYQMEYVMSFLMGLNDTFAQGRGQLLLMDPMPSINKVFSLVSQEEHQRN 181

Query: 254 IG-----NSSKEVITLMAYNNTKKNSVDNSNKRRETIKSVCTHCGFKGHTTDKCYRIHGF 313
           I      +++ + +   A  + KK S+   +K ++  K +CT+C   GH+ DKCY++HG+
Sbjct: 182 ISINAGISNTGDSMAFYAKIDPKKGSL-GQHKFQKKEKPICTYCKLVGHSVDKCYKLHGY 241

Query: 314 PPGFKSRRNIN-----ENGSQNAGTNSVSQGSSS---------FLDNLDKNQCTQLIEML 373
           PPG+K ++  N     +N  ++   N V   + S         F+ +L+  Q  QL+ ML
Sbjct: 242 PPGYKMKQRSNFTDQVDNQPRHIAANQVVFANKSEQAHTNAEDFMHSLNHTQYQQLMNML 301

Query: 374 NSRLQDEK-KTAIASAVNHISG-INSVSLS---KSPNSWILDSGASKHICFNRQSFTNLH 433
            + L   K  T      N +SG   S+ L+    SP  W++DSGA+ HICF++ +F ++ 
Sbjct: 302 GNHLTSAKTNTRNDEHTNQVSGTCFSIVLNPCLNSPKHWVMDSGATSHICFSKSAFYSMK 361

Query: 434 SINDMSIVLPNNFRVNVEFVGDVQINSRLILHDVLLVPQFTYNLISVSCLLASNDIALDF 493
            I +  + LPN+ R+ V FVG V+ ++ L+L DVL VP F +NL+SVS L+  ++I + F
Sbjct: 362 LIENAYVTLPNHKRIPVSFVGIVKFSNNLMLEDVLYVPNFKFNLMSVSSLIKDSNIIVRF 421

Query: 494 SGKCCILQDKKNFQMIGKADCTNGLYI-----LDS---------------CISSIACSVT 513
               C +QD  N +MIGK   + GLYI     LDS                +SS+   V 
Sbjct: 422 FANECDIQDTHNQKMIGKGRRSAGLYIISATALDSFPTHSRNLSIDKVCVSVSSVVNKVN 481

BLAST of Sed0003227 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.9e-15
Identity = 109/484 (22.52%), Postives = 190/484 (39.26%), Query Frame = 0

Query: 57  NQPLIGADNYNSWKRAFLIALAGKNKEGFVNGSI----------EKPKNEKLIASWKCNN 116
           N   + + NY  W R       G    GF++GS             P+       WK  +
Sbjct: 22  NVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRVNPDYTRWKRQD 81

Query: 117 HIITSWILNSVSKEIAASIICTGTAKDVWDELAE-----RFKRIFQLRKELANITQGTMT 176
            +I S +L ++S  +  ++    TA  +W+ L +      +  + QLR +L   T+GT T
Sbjct: 82  KLIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGTKT 141

Query: 177 IEAYFTKIKTVWQDLIEFRPDVECTCGALKPFIEHLNSEYVMIFLMGLNETYAAVRTQIL 236
           I+ Y   + T +  L      ++             + E V   L  L E Y  V  QI 
Sbjct: 142 IDDYMQGLVTRFDQLALLGKPMD-------------HDEQVERVLENLPEEYKPVIDQIA 201

Query: 237 LMEPLPSINKAFSLIVQEERQRIIGNSSKEVITLMAYNNTKKNSVDNSNKRRETIKSVCT 296
             +  P++ +    ++  E  +I+  SS  VI + A   + +N+   +N           
Sbjct: 202 AKDTPPTLTEIHERLLNHE-SKILAVSSATVIPITANAVSHRNTTTTNNNNN-------- 261

Query: 297 HCGFKGHTTDKCYRIHGFPPGFKSRRNINENGSQNAGTNSVSQGSSSFLDNLDKNQCTQL 356
             G + +  D     +   P  +S  N + N +Q+       Q     +      +C+QL
Sbjct: 262 --GNRNNRYDNRNNNNNSKPWQQSSTNFHPNNNQSKPYLGKCQICG--VQGHSAKRCSQL 321

Query: 357 ---IEMLNSRLQDEKKTAIASAVNHISGINSVSLSKSPNSWILDSGASKHIC--FNRQSF 416
              +  +NS+      T      N   G        S N+W+LDSGA+ HI   FN  S 
Sbjct: 322 QHFLSSVNSQQPPSPFTPWQPRANLALG-----SPYSSNNWLLDSGATHHITSDFNNLSL 381

Query: 417 TNLHSINDMSIVLPNNFRVNVEFVGDVQINSR---LILHDVLLVPQFTYNLISVSCLLAS 476
              ++  D  +++ +   + +   G   ++++   L LH++L VP    NLISV  L  +
Sbjct: 382 HQPYTGGD-DVMVADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLCNA 441

Query: 477 NDIALDFSGKCCILQDKKNFQMIGKADCTNGLYILD-------SCISSIACSVTVDIWHR 511
           N ++++F      ++D      + +    + LY          S  +S +   T   WH 
Sbjct: 442 NGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQPVSLFASPSSKATHSSWHA 473

BLAST of Sed0003227 vs. ExPASy TrEMBL
Match: A0A5A7VE66 (Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold76G00250 PE=4 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 2.2e-131
Identity = 248/522 (47.51%), Postives = 352/522 (67.43%), Query Frame = 0

Query: 15  LDSQLNPSDSQLNPSDSQLNPLDLQLNPFLMHHSYTATSILVNQPLIGADNYNSWKRAFL 74
           +++Q + + S+ +P  +  +  D QLNP+ +HHS   T+ +V QPL GA NY SW RA L
Sbjct: 1   MENQSSTNGSRFDPLTAANSQNDAQLNPYFIHHSLGPTAAIVTQPLTGAINYTSWSRAML 60

Query: 75  IALAGKNKEGFVNGSIEKPKNEKLIASWKCNNHIITSWILNSVSKEIAASIICTGTAKDV 134
           +A++G+NK GF+ G I+KP +  L+ +W CNN I+ SWILNSVSKEIAASII  G+ K++
Sbjct: 61  MAISGRNKAGFITGKIQKPSDGVLLDAWICNNDILASWILNSVSKEIAASIIYIGSIKEI 120

Query: 135 WDELAERFKR-----IFQLRKELANITQGTMTIEAYFTKIKTVWQDLIEFRPDVECTCGA 194
           WDEL +RFK+     I+QLRKE   + QG +TIE Y+TK+KT+WQ+L E+R   +CTCG 
Sbjct: 121 WDELRQRFKQSNGPSIYQLRKEFVTLRQGNLTIETYYTKLKTIWQNLNEYRFTNDCTCGG 180

Query: 195 LKPFIEHLNSEYVMIFLMGLNETYAAVRTQILLMEPLPSINKAFSLIVQEERQRIIGNSS 254
           LKPFI+HL SEY+M FLMGLN++YAAVR QILLM+PLPSIN  FSL++QEE+QR  G  +
Sbjct: 181 LKPFIDHLESEYIMAFLMGLNDSYAAVRAQILLMQPLPSINTVFSLLIQEEQQRSAGILT 240

Query: 255 KEVITLMAYNNTKKNSVDNSNKRRETIKSVCTHCGFKGHTTDKCYRIHGFPPGFKSRR-N 314
             +  +    N   +   ++++ R+  +  C++CG KGH  DKCY+ HG+PPG+K R  N
Sbjct: 241 PPIDPVAL--NIASSMAISTDRNRKKERPTCSYCGIKGHIADKCYKKHGYPPGYKPRNSN 300

Query: 315 INENGSQNAGTNSVSQGSSS-------FLDNLDKNQCTQLIEMLNSRLQDEKKTAI--AS 374
                   + TN+V+  +S+       F  +L+  Q +QL+ +LN+ LQ      I  A+
Sbjct: 301 SITTAPDTSKTNNVANTNSAAANRSPDFFSSLNSEQYSQLMTLLNNHLQAATTAPITTAT 360

Query: 375 AVNHISGINSVSL--SKSPNSWILDSGASKHICFNRQSFTNLHSINDMSIVLPNNFRVNV 434
           A+ H SGI +++   ++S + WI+DSGAS+HIC ++  F N    N+M ++LPN  R++V
Sbjct: 361 AITHTSGIFALTSHNNQSHDEWIIDSGASRHICHDKSLFKNWSHTNNMFVMLPNGHRISV 420

Query: 435 EFVGDVQINSRLILHDVLLVPQFTYNLISVSCLLASNDIALDFSGKCCILQDKKNFQMIG 494
           + +GD+QIN  L L DVL V QF YNLISVSCLL + +I+LDF   CCI+QD     MIG
Sbjct: 421 DLIGDIQINGSLTLKDVLFVSQFAYNLISVSCLLITKNISLDFQSTCCIIQDLSRPMMIG 480

Query: 495 KADCTNGLYILD-----SCISS--IACSVTVDIWHRRLGHLS 513
           KA C NGLY+L+     +CI++     +++VD WH+RLGHLS
Sbjct: 481 KASCQNGLYVLNKEANTNCIAAGVKINAISVDTWHQRLGHLS 520

BLAST of Sed0003227 vs. ExPASy TrEMBL
Match: A0A6J1CXR2 (uncharacterized protein LOC111015239 OS=Momordica charantia OX=3673 GN=LOC111015239 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 1.4e-93
Identity = 186/364 (51.10%), Postives = 250/364 (68.68%), Query Frame = 0

Query: 36  LDLQLNPFLMHHSYTATSILVNQPLIGADNYNSWKRAFLIALAGKNKEGFVNGSIEKPKN 95
           ++ QLNP+L+HHS   T++LV Q L+GA NYNSW R+ LIAL+GKNK GF++G+I+KP N
Sbjct: 21  IESQLNPYLIHHSTAPTTMLVTQQLLGASNYNSWCRSMLIALSGKNKVGFIDGTIKKP-N 80

Query: 96  EKLIASWKCNNHIITSWILNSVSKEIAASIICTGTAKDVWDELAERFK-----RIFQLRK 155
             L+A+WKCNN IITSWI+NSVSKEIAASII TG+AKD+WDEL ERF+     RIFQLRK
Sbjct: 81  GNLLAAWKCNNDIITSWIINSVSKEIAASIIYTGSAKDIWDELKERFQQSDAPRIFQLRK 140

Query: 156 ELANITQGTMTIEAYFTKIKTVWQDLIEFRPDVECTCGALKPFIEHLNSEYVMIFLMGLN 215
           EL    QGT++IEAY+TK+KTVWQ+L ++RP ++CTC  LK   E   SEYVM FLMGLN
Sbjct: 141 ELVTTIQGTLSIEAYYTKLKTVWQELTDYRPTIDCTCSGLKSLSEFFQSEYVMTFLMGLN 200

Query: 216 ETYAAVRTQILLMEPLPSINKAFSLIVQEERQRIIG--NSSKEVITLMAYNNTKKNSVDN 275
           E+YA +R QILLM+P+P +NK FSL++QEERQR IG  N     + +     +K+NS   
Sbjct: 201 ESYAKIRAQILLMDPIPPMNKVFSLLIQEERQRAIGTINPPLPSMAMAVAEISKRNSA-- 260

Query: 276 SNKRRETIKSVCTHCGFKGHTTDKCYRIHGFPPGFKSRRNI-------NENGSQNAG--- 335
           +  RR+  +S CTHCG +GH  DKCY++HG+PPG+++           N NG+ ++    
Sbjct: 261 TQFRRKDNRSFCTHCGLRGHVIDKCYKLHGYPPGYRANNPAARIGQLHNPNGTSHSNGVV 320

Query: 336 TNSVSQ----------------GSSSFLDNLDKNQCTQLIEMLNSRLQDEKKTAIASAVN 367
            N VS+                 S +F ++L+ +Q +QL+EML S LQ  K   I + +N
Sbjct: 321 ANQVSEKNVDITSSPAIQRPSNSSPAFFNSLNSSQYSQLMEMLQSHLQAAKPETI-TPMN 380

BLAST of Sed0003227 vs. ExPASy TrEMBL
Match: A0A2Z7CMI0 (Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_16989 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 1.2e-89
Identity = 192/513 (37.43%), Postives = 305/513 (59.45%), Query Frame = 0

Query: 41  NPFLMHHSYTATSILVNQPLIGADNYNSWKRAFLIALAGKNKEGFVNGSIEKPKNEKLI- 100
           +P+ +H+       LV+ PLIG+ NYN+W+RA ++AL  KNK GF++ SI++P++E L+ 
Sbjct: 25  SPYYLHNGDHPGLTLVSNPLIGS-NYNTWRRAMIVALTAKNKLGFIDRSIDRPRSEDLLY 84

Query: 101 ASWKCNNHIITSWILNSVSKEIAASIICTGTAKDVWDELAERF-----KRIFQLRKELAN 160
            SW   N ++ SWILNSV++ IA S++   TA+++W +L ERF      RI+Q++K L+ 
Sbjct: 85  GSWIRCNSMVISWILNSVARNIADSLMYMQTAEEIWTDLYERFHESNAPRIYQIKKLLSG 144

Query: 161 ITQGTMTIEAYFTKIKTVWQDLIEFRPDVECTCGALKPFIEHLNSEYVMIFLMGLNETYA 220
           + QG+M + +Y+TK++T+W +L +++P   CTCG+++ +  + N E VM FLMGLN++YA
Sbjct: 145 LQQGSMDVSSYYTKLRTLWDELRDYQPTSACTCGSMREWFNYQNQECVMHFLMGLNDSYA 204

Query: 221 AVRTQILLMEPLPSINKAFSLIVQEERQRIIG-NSSKEVITLMAYNNTKKNSVDNSNKRR 280
            VR Q+L++EPLP+I K F+L++QEERQR I  + SK  +      +   +S + +   R
Sbjct: 205 QVRAQVLMIEPLPTIAKVFALVIQEERQRSIHYDVSKAGVDHSGILSNVNSSANTATSLR 264

Query: 281 ETIKS--------VCTHCGFKGHTTDKCYRIHGFPPG---FKSRRNINENGSQNAGTNSV 340
            +  S        +C+HC F+ HT DKCY++HG+PPG   FKS+ +     +  A ++S 
Sbjct: 265 TSQNSKGGRGDRIICSHCHFRNHTVDKCYKLHGYPPGHPKFKSQISQGSAHAHQASSSSE 324

Query: 341 SQGSSSFLDNLD---KNQCTQLIEMLNSRLQDEKK--------------TAIASAVNHIS 400
           ++  +  +D+ D   ++QC QLIE L+S+LQ  +               T I SA +HI 
Sbjct: 325 TRQETQQIDHSDSLTQSQCKQLIEFLSSKLQTRQNLLMEHQPETTVSCLTGICSATSHIP 384

Query: 401 GINSVSLSKSPNSWILDSGASKHICFNRQSFTNLHSINDMSIVLPNNFRVNVEFVGDVQI 460
            I       +   WI+D+GA+ HIC +   F +  +I    +VLPN   + V   G V +
Sbjct: 385 AI-------TRKDWIMDTGATHHICCSLSMFKSSRAIQS-KVVLPNTLTIPVTIAGTVAV 444

Query: 461 NSRLILHDVLLVPQFTYNLISVSCLLASNDIALDFSGKCCILQDKKNFQMIGKADCTNGL 513
            S L+L +VL VP F +NL+SVS L  +++ ++ F    C +QD    +MIG       L
Sbjct: 445 TSNLVLQNVLYVPVFQFNLLSVSSLTDNHNCSVSFMSDSCKIQDISQIRMIGMGKRIGNL 504

BLAST of Sed0003227 vs. ExPASy TrEMBL
Match: A0A151U9A5 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=3821 GN=KK1_020114 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 1.6e-89
Identity = 196/529 (37.05%), Postives = 295/529 (55.77%), Query Frame = 0

Query: 29  SDSQLNPLDLQLNPFLMHHSYTATSILVNQPLIGADNYNSWKRAFLIALAGKNKEGFVNG 88
           ++S   P D   NP+ +H S    + +V+QPL G DNYNSW RA L+AL  KNK GFV+G
Sbjct: 5   NNSSSLPTDDYANPYFLHPSDNPGAFIVSQPLNG-DNYNSWSRAILMALGEKNKIGFVDG 64

Query: 89  SIEKP-KNEKLIASWKCNNHIITSWILNSVSKEIAASIICTGTAKDVWDELAERFK---- 148
           +I KP   +K   SW+ NN+I+ SW+LN +SK++ AS+I + +A  +W++L  RF+    
Sbjct: 65  TIPKPLPTDKSYHSWQRNNNIVASWLLNFISKDLQASVIYSSSATAIWNDLRIRFQQHNG 124

Query: 149 -RIFQLRKELANITQGTMTIEAYFTKIKTVWQDLIEFRPDVECTCGALKPFIEHLNSEYV 208
            R+FQLR++L  + QG++ I  YFTKIK +W++L E++P   CTCG +KP+I+H  SEY 
Sbjct: 125 PRVFQLRRDLVTLKQGSLNITHYFTKIKALWEELAEYQPSHACTCGGIKPWIDHHQSEYA 184

Query: 209 MIFLMGLNETYAAVRTQILLMEPLPSINKAFSLIVQEERQRIIG--NSSKEVITLMAY-- 268
           M+FLMGLNE Y+ +R QILLM+P+P I K FSL++QEE+Q+ +G   +S +  T  AY  
Sbjct: 185 MLFLMGLNEGYSHIRGQILLMDPIPPIEKGFSLVLQEEKQQELGIPTNSNDTPTAFAYKS 244

Query: 269 NNTKKNSVDNSNKRRETIKSVCTHCGFKGHTTDKCYRIHGFPPGFKSRRNINENGSQNAG 328
            N  K+  +N  K R      C HCG  GH  DKC+++HG+P   K        G+ N  
Sbjct: 245 GNDAKSRTNNPTKERPK----CEHCGKLGHIKDKCFKLHGYPTHLK-------QGNSNTN 304

Query: 329 TNSVSQGSSSFLDNLDKNQCTQLIEMLNSRLQDEKKTAIASAVNHISGINSVSLSKSPN- 388
            N VS  S+        +Q  Q++ +L ++         ++ +     +N + LS  P+ 
Sbjct: 305 VNQVSDKSAKAF-QFTTDQYHQILSLLQNQ-------PSSNCIESNPIVNGLLLSIRPSF 364

Query: 389 ------SWILDSGASKHICFNRQSFTNLHSINDMSIVLPNNFRVNVEFVGDVQINSRLIL 448
                  WILDSGAS H+  +   F     I +  + LPN   + V  +G V ++  ++L
Sbjct: 365 NSIPSTKWILDSGASTHVACSLSLFKTYKIIKNRHVTLPNQSHIPVCGIGTVYLDQDIVL 424

Query: 449 HDVLLVPQFTYNLISVSCLLASNDIALDFSGKCCILQDKKNFQMIGKADCTNGLYILDSC 508
            DV+ VPQF YNL+S++CLL  N ++L F     ILQD  + +MIG  +   G+Y+L+  
Sbjct: 425 KDVIYVPQFQYNLLSINCLLKHNSLSLLFISNKFILQDILHNKMIGTGEAVQGVYLLNQL 484

Query: 509 IS----------------------------SIACSVTVDIWHRRLGHLS 513
           ++                            +  C+    IWH R GH++
Sbjct: 485 VNPASLASVNNNSVCFSDNSLNVNSNSASVNSTCTKDAAIWHSRFGHVN 513

BLAST of Sed0003227 vs. ExPASy TrEMBL
Match: A0A2Z7AT15 (Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Dorcoceras hygrometricum OX=472368 GN=F511_01974 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 1.6e-89
Identity = 192/513 (37.43%), Postives = 304/513 (59.26%), Query Frame = 0

Query: 41  NPFLMHHSYTATSILVNQPLIGADNYNSWKRAFLIALAGKNKEGFVNGSIEKPKNEKLI- 100
           +P+ +H+       LV+ PLIG+ NYN+W+RA ++AL  KNK GF++ SI++P++E L+ 
Sbjct: 25  SPYYLHNGDHPGLTLVSNPLIGS-NYNTWRRAMIVALTAKNKLGFIDRSIDRPRSEDLLY 84

Query: 101 ASWKCNNHIITSWILNSVSKEIAASIICTGTAKDVWDELAERF-----KRIFQLRKELAN 160
            SW   N ++ SWILNSV++ IA S++   TA+++W +L ERF      RI+Q++K L+ 
Sbjct: 85  GSWIRCNSMVISWILNSVARNIADSLMYMQTAEEIWTDLYERFHESNAPRIYQIKKLLSG 144

Query: 161 ITQGTMTIEAYFTKIKTVWQDLIEFRPDVECTCGALKPFIEHLNSEYVMIFLMGLNETYA 220
           + QG+M + +Y+TK++T+W +L +++P   CTCG+++ +  + N E VM FLMGLN++YA
Sbjct: 145 LQQGSMDVSSYYTKLRTLWDELRDYQPTSACTCGSMREWFNYQNQECVMHFLMGLNDSYA 204

Query: 221 AVRTQILLMEPLPSINKAFSLIVQEERQRIIG-NSSKEVITLMAYNNTKKNSVDNSNKRR 280
            VR Q+L++EPLP+I K F+L++QEERQR I  + SK  +      +   +S + +   R
Sbjct: 205 QVRAQVLMIEPLPTIAKVFALVIQEERQRSIHYDVSKAGVDHSGILSNVNSSANTATSLR 264

Query: 281 ETIKS--------VCTHCGFKGHTTDKCYRIHGFPPG---FKSRRNINENGSQNAGTNSV 340
            +  S        +C+HC F+ HT DKCY++HG+PPG   FKS+ +     +  A ++S 
Sbjct: 265 TSQNSKGGRGDRIICSHCHFRNHTVDKCYKLHGYPPGHPKFKSQISQGSAHAHQASSSSE 324

Query: 341 SQGSSSFLDNLD---KNQCTQLIEMLNSRLQDEKK--------------TAIASAVNHIS 400
           +   +  +D+ D   ++QC QLIE L+S+LQ  +               T I SA +HI 
Sbjct: 325 THQETQQIDHSDSLTQSQCKQLIEFLSSKLQTRQNLLMEHQPETTVSCLTGICSATSHIP 384

Query: 401 GINSVSLSKSPNSWILDSGASKHICFNRQSFTNLHSINDMSIVLPNNFRVNVEFVGDVQI 460
            I       +   WI+D+GA+ HIC +   F +  +I    +VLPN   + V   G V +
Sbjct: 385 AI-------TRKDWIMDTGATHHICCSLSMFKSSRAIQS-KVVLPNTLTIPVTIAGTVAV 444

Query: 461 NSRLILHDVLLVPQFTYNLISVSCLLASNDIALDFSGKCCILQDKKNFQMIGKADCTNGL 513
            S L+L +VL VP F +NL+SVS L  +++ ++ F    C +QD    +MIG       L
Sbjct: 445 TSNLVLQNVLYVPVFQFNLLSVSSLTDNHNCSVSFMSDSCKIQDISQIRMIGMGKRIGNL 504

BLAST of Sed0003227 vs. TAIR 10
Match: AT1G21280.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 114.4 bits (285), Expect = 2.7e-25
Identity = 65/190 (34.21%), Postives = 104/190 (54.74%), Query Frame = 0

Query: 64  DNYNSWKRAFLIALAGKNKEGFVNGSIEKPKN-EKLIASWKCNNHIITSWILNSVSKEIA 123
           DNY +WK  F   L    K GF++G++ KP     L   W+  N ++  W++NS++ ++ 
Sbjct: 40  DNYVAWKIRFRSFLRVTKKFGFIDGTLPKPDPFSPLYQPWEQCNAMVMYWLMNSMTDKLL 99

Query: 124 ASIICTGTAKDVWDELAERF-----KRIFQLRKELANITQGTMTIEAYFTKIKTVWQDLI 183
            S++   TA  +W++L   F      +I+QLR+ LA + QG  ++E YF K+  VW +L 
Sbjct: 100 ESVMYAETAHKMWEDLRRVFVPCVDLKIYQLRRRLATLRQGGDSVEEYFGKLSKVWMELS 159

Query: 184 EFRPDVECTCG-----ALKPFIEHLNSEYVMIFLMG--LNETYAAVRTQILLMEPLPSIN 241
           E+ P  EC CG       K   E    E    FLMG  LN+ + AV T+I+  +P PS++
Sbjct: 160 EYAPIPECKCGGCNCECTKRAEEAREKEQRYEFLMGLKLNQGFEAVTTKIMFQKPPPSLH 219

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0065480.14.5e-13147.51Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa] >T... [more]
XP_022145891.12.9e-9351.10uncharacterized protein LOC111015239 [Momordica charantia][more]
XP_012833844.15.4e-9239.25PREDICTED: uncharacterized protein LOC105954710 [Erythranthe guttata][more]
XP_012857659.11.7e-9038.65PREDICTED: uncharacterized protein LOC105976934 [Erythranthe guttata][more]
XP_022856063.16.6e-9041.26uncharacterized protein LOC111377235, partial [Olea europaea var. sylvestris][more]
Match NameE-valueIdentityDescription
Q94HW21.9e-1522.52Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Match NameE-valueIdentityDescription
A0A5A7VE662.2e-13147.51Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa O... [more]
A0A6J1CXR21.4e-9351.10uncharacterized protein LOC111015239 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A2Z7CMI01.2e-8937.43Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_16989 PE=4... [more]
A0A151U9A51.6e-8937.05Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=... [more]
A0A2Z7AT151.6e-8937.43Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Dorcoceras hygrometricum O... [more]
Match NameE-valueIdentityDescription
AT1G21280.12.7e-2534.21CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Ha... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029472Retrotransposon Copia-like, N-terminalPFAMPF14244Retrotran_gag_3coord: 46..94
e-value: 7.7E-14
score: 51.2
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 110..211
e-value: 3.7E-8
score: 33.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 307..326
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 305..326
NoneNo IPR availablePANTHERPTHR34222FAMILY NOT NAMEDcoord: 80..350
NoneNo IPR availablePANTHERPTHR34222:SF6OS02G0671800 PROTEINcoord: 80..350

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0003227.1Sed0003227.1mRNA
Sed0003227.2Sed0003227.2mRNA