Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAATAAGGAAAATTAGGGCAAAAAGATCATAACACAGAATATGTGATCCCTATTCCATATAAAAACTCCCCTCCCCGCCATGAACCTCAAGAACCAAAACCCAGAAGAAAAAAAATGGATATCATCAAATTCAAAGCCAATGCATTACCAAATTCAAACTCAACATGATCCTCGATCTTGATATGCCACCAATCCCACAACCCATCTCCAATTTCCCTCCATTTTTCCTCGCCGCATTTTCCCTTTTCGTGTTCATCTCATCTTCTTCCTCGAAATCCTTCAAATCCAAAAACCCCCATCGCCGATTTCTCAAGAAATCCTCCATGTCCATCTCAAATCCTCGCCTCCGCCCCTTTTCCTCGCCGCAATCCCTCTCCAATTGGCTCAAACCCCGATTACCCACCGATTCATTCGCTTCTTGGGGCGTTAAACCCGGCACCAAGAACATCCACAACCTCTGGCTCGAGCTCTCCCATGGCGAAACCTCCCTCGCCGATTCAACCCCTCCAGTCCGCACTCTACAAGTTCTTTCCCTTCGAATCCTCGATACCCATCGCCGATTTCTCCTTGAATCTCACCAGGAACTTTCAGATGGTAGTATTCGGGTTCGGAATCGGCCCTTGTCGGAGAAAATGAAGCCCAATGAAACCCCTGAATCCGCTGTGTTTCGGGCTGTAAAGGAAGAGCTGGGGTCGGTTCTTGTCGGGTCGGATTGCAATAAGATTGTTCGGATCGTTCCGGATTCGTATCGGGTTCGGGTCGAGGAGCGGGATTCGGTTTCGTACCCGGGTTTGCCGGCTTGTTATGTTCTGCATTCGTTGGATGTTTGGGTGGAAGGTTTGCCTGAGGGAGAGTTTTGCACTGTGGAGGAAGAGGAATATGAAAATTCTGAGGAATTGAGCGTTGCTGATGAGGCTGTGTCTGTTAAGAAGCATTTCTGGAAATGGGTTAGTTCTGATTCTTTGGATTCTTGAGCTAAATTGATATATCTTTTGTGTCTTATATGTTATTCTTAATTATTTGTGCAAGGGATAGATGAATTGAATTGATATGTTTTTGTTTAGTCTGTTTAGCTGAAGGAAATGAGTTATAGCTCTTTATCTAATTCCATAAGCACTTGCATCTGTTCTGTTTTGTTTGTTTGTTTGTCAATTTTTGTGTAGCATTGATGGGGATCTGTTAATTATGGATCCAACTTAGTGAAAGGCTAATGGTTTGACATCAATTCCTTGTAAGATGTTAAAAATGAAAAACTGTACCTGATGAATCTATTCAAAACATCTCAATGAAAAACTATAGTCTCTAATTTAATTTATTTTGCATACTCTTGTGAGAGAAGGGGGCTAAGGGTGTGAGTGATAAAATTTTTGAAGAGAGTTTTATATATTTGAGGT
mRNA sequence
TAAATAAGGAAAATTAGGGCAAAAAGATCATAACACAGAATATGTGATCCCTATTCCATATAAAAACTCCCCTCCCCGCCATGAACCTCAAGAACCAAAACCCAGAAGAAAAAAAATGGATATCATCAAATTCAAAGCCAATGCATTACCAAATTCAAACTCAACATGATCCTCGATCTTGATATGCCACCAATCCCACAACCCATCTCCAATTTCCCTCCATTTTTCCTCGCCGCATTTTCCCTTTTCGTGTTCATCTCATCTTCTTCCTCGAAATCCTTCAAATCCAAAAACCCCCATCGCCGATTTCTCAAGAAATCCTCCATGTCCATCTCAAATCCTCGCCTCCGCCCCTTTTCCTCGCCGCAATCCCTCTCCAATTGGCTCAAACCCCGATTACCCACCGATTCATTCGCTTCTTGGGGCGTTAAACCCGGCACCAAGAACATCCACAACCTCTGGCTCGAGCTCTCCCATGGCGAAACCTCCCTCGCCGATTCAACCCCTCCAGTCCGCACTCTACAAGTTCTTTCCCTTCGAATCCTCGATACCCATCGCCGATTTCTCCTTGAATCTCACCAGGAACTTTCAGATGGTAGTATTCGGGTTCGGAATCGGCCCTTGTCGGAGAAAATGAAGCCCAATGAAACCCCTGAATCCGCTGTGTTTCGGGCTGTAAAGGAAGAGCTGGGGTCGGTTCTTGTCGGGTCGGATTGCAATAAGATTGTTCGGATCGTTCCGGATTCGTATCGGGTTCGGGTCGAGGAGCGGGATTCGGTTTCGTACCCGGGTTTGCCGGCTTGTTATGTTCTGCATTCGTTGGATGTTTGGGTGGAAGGTTTGCCTGAGGGAGAGTTTTGCACTGTGGAGGAAGAGGAATATGAAAATTCTGAGGAATTGAGCGTTGCTGATGAGGCTGTGTCTGTTAAGAAGCATTTCTGGAAATGGGTTAGTTCTGATTCTTTGGATTCTTGAGCTAAATTGATATATCTTTTGTGTCTTATATGTTATTCTTAATTATTTGTGCAAGGGATAGATGAATTGAATTGATATGTTTTTGTTTAGTCTGTTTAGCTGAAGGAAATGAGTTATAGCTCTTTATCTAATTCCATAAGCACTTGCATCTGTTCTGTTTTGTTTGTTTGTTTGTCAATTTTTGTGTAGCATTGATGGGGATCTGTTAATTATGGATCCAACTTAGTGAAAGGCTAATGGTTTGACATCAATTCCTTGTAAGATGTTAAAAATGAAAAACTGTACCTGATGAATCTATTCAAAACATCTCAATGAAAAACTATAGTCTCTAATTTAATTTATTTTGCATACTCTTGTGAGAGAAGGGGGCTAAGGGTGTGAGTGATAAAATTTTTGAAGAGAGTTTTATATATTTGAGGT
Coding sequence (CDS)
ATGATCCTCGATCTTGATATGCCACCAATCCCACAACCCATCTCCAATTTCCCTCCATTTTTCCTCGCCGCATTTTCCCTTTTCGTGTTCATCTCATCTTCTTCCTCGAAATCCTTCAAATCCAAAAACCCCCATCGCCGATTTCTCAAGAAATCCTCCATGTCCATCTCAAATCCTCGCCTCCGCCCCTTTTCCTCGCCGCAATCCCTCTCCAATTGGCTCAAACCCCGATTACCCACCGATTCATTCGCTTCTTGGGGCGTTAAACCCGGCACCAAGAACATCCACAACCTCTGGCTCGAGCTCTCCCATGGCGAAACCTCCCTCGCCGATTCAACCCCTCCAGTCCGCACTCTACAAGTTCTTTCCCTTCGAATCCTCGATACCCATCGCCGATTTCTCCTTGAATCTCACCAGGAACTTTCAGATGGTAGTATTCGGGTTCGGAATCGGCCCTTGTCGGAGAAAATGAAGCCCAATGAAACCCCTGAATCCGCTGTGTTTCGGGCTGTAAAGGAAGAGCTGGGGTCGGTTCTTGTCGGGTCGGATTGCAATAAGATTGTTCGGATCGTTCCGGATTCGTATCGGGTTCGGGTCGAGGAGCGGGATTCGGTTTCGTACCCGGGTTTGCCGGCTTGTTATGTTCTGCATTCGTTGGATGTTTGGGTGGAAGGTTTGCCTGAGGGAGAGTTTTGCACTGTGGAGGAAGAGGAATATGAAAATTCTGAGGAATTGAGCGTTGCTGATGAGGCTGTGTCTGTTAAGAAGCATTTCTGGAAATGGGTTAGTTCTGATTCTTTGGATTCTTGA
Protein sequence
MILDLDMPPIPQPISNFPPFFLAAFSLFVFISSSSSKSFKSKNPHRRFLKKSSMSISNPRLRPFSSPQSLSNWLKPRLPTDSFASWGVKPGTKNIHNLWLELSHGETSLADSTPPVRTLQVLSLRILDTHRRFLLESHQELSDGSIRVRNRPLSEKMKPNETPESAVFRAVKEELGSVLVGSDCNKIVRIVPDSYRVRVEERDSVSYPGLPACYVLHSLDVWVEGLPEGEFCTVEEEEYENSEELSVADEAVSVKKHFWKWVSSDSLDS
Homology
BLAST of Sed0003210 vs. NCBI nr
Match:
XP_022974352.1 (uncharacterized protein LOC111472979 [Cucurbita maxima])
HSP 1 Score: 403.3 bits (1035), Expect = 1.7e-108
Identity = 209/285 (73.33%), Postives = 237/285 (83.16%), Query Frame = 0
Query: 9 PIPQPISN---------FPPFFLAAFSLFVFISSSSSKSFK------SKNPHRRFLKKSS 68
P PQPIS+ P FFLAA SLFVF+SSSSS+SFK NP RRFLK S
Sbjct: 9 PPPQPISDLPHLTRSPPLPDFFLAALSLFVFLSSSSSRSFKLPLLCIQSNP-RRFLKTPS 68
Query: 69 MSISNP----------RLRPFSSPQSLSNWLKPRLPTDSFASWGVKPGTKNIHNLWLELS 128
MS S+P RL PF+SPQSLS+WLKPRLP+DSFASWGVKPGTKN+HNLWLELS
Sbjct: 69 MSFSHPNSGRTPHDAHRLHPFASPQSLSDWLKPRLPSDSFASWGVKPGTKNVHNLWLELS 128
Query: 129 HGETSLADSTPPVRTLQVLSLRILDTHRRFLLESHQELSDGSIRVRNRPLSEKMKPNETP 188
GETSLADSTPP+RT+QVLSLRI+D HRR LLESHQ+LSDG++R RNRPLSEKMKPNETP
Sbjct: 129 EGETSLADSTPPIRTVQVLSLRIIDNHRRILLESHQQLSDGTLRNRNRPLSEKMKPNETP 188
Query: 189 ESAVFRAVKEELGSVLVGSDCNKIVRIVPDSYRVRVEERDSVSYPGLPACYVLHSLDVWV 248
ESAV+RAVKEELGS+L SDC++IV+IVPDSY++++EER+S SYPGLPACYVLHS+DV V
Sbjct: 189 ESAVYRAVKEELGSILGDSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVLHSMDVLV 248
Query: 249 EGLPEGEFCTVEEEEYENSEELSVADEAVSVKKHFWKWVSSDSLD 269
EGLP+ +FCTVEEEEY NSEE S+ADEAVSVKKHFWKWVS DSLD
Sbjct: 249 EGLPKEDFCTVEEEEYANSEESSIADEAVSVKKHFWKWVSLDSLD 292
BLAST of Sed0003210 vs. NCBI nr
Match:
XP_022922297.1 (uncharacterized protein LOC111430319 [Cucurbita moschata] >KAG7025097.1 hypothetical protein SDJN02_13920, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 401.4 bits (1030), Expect = 6.3e-108
Identity = 208/285 (72.98%), Postives = 236/285 (82.81%), Query Frame = 0
Query: 9 PIPQPISN---------FPPFFLAAFSLFVFISSSSSKSFK------SKNPHRRFLKKSS 68
P PQPIS+ P FFLAA SLFVF+SSSSS+SFK NP RRFLK S
Sbjct: 9 PPPQPISDLPHLTRSPPLPDFFLAALSLFVFLSSSSSRSFKFPLLCIQSNP-RRFLKTPS 68
Query: 69 MSISNP----------RLRPFSSPQSLSNWLKPRLPTDSFASWGVKPGTKNIHNLWLELS 128
MS S+P RL PF+SPQSLS+WLKPRLP+DSFASWGVKPGTKN+HNLWLELS
Sbjct: 69 MSFSHPNSGRTPHDAHRLHPFTSPQSLSDWLKPRLPSDSFASWGVKPGTKNVHNLWLELS 128
Query: 129 HGETSLADSTPPVRTLQVLSLRILDTHRRFLLESHQELSDGSIRVRNRPLSEKMKPNETP 188
GETSLADS PP+RT+QVLSLRI+D HRR LLESHQ+LSDG++R RNRPLSEKMKPNETP
Sbjct: 129 EGETSLADSNPPIRTVQVLSLRIIDNHRRILLESHQQLSDGTLRNRNRPLSEKMKPNETP 188
Query: 189 ESAVFRAVKEELGSVLVGSDCNKIVRIVPDSYRVRVEERDSVSYPGLPACYVLHSLDVWV 248
ESAV+RAVKEELGS+L SDC++IV+IVPDSY++++EER+S SYPGLPACYVLHS+DV V
Sbjct: 189 ESAVYRAVKEELGSILGDSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVLHSMDVLV 248
Query: 249 EGLPEGEFCTVEEEEYENSEELSVADEAVSVKKHFWKWVSSDSLD 269
EGLP+ +FCTVEEEEY NSEE S+ADEAVSVKKHFWKWVS DSLD
Sbjct: 249 EGLPKEDFCTVEEEEYVNSEETSIADEAVSVKKHFWKWVSLDSLD 292
BLAST of Sed0003210 vs. NCBI nr
Match:
XP_023550799.1 (uncharacterized protein LOC111808831 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 401.0 bits (1029), Expect = 8.2e-108
Identity = 208/285 (72.98%), Postives = 236/285 (82.81%), Query Frame = 0
Query: 9 PIPQPISN---------FPPFFLAAFSLFVFISSSSSKSFK------SKNPHRRFLKKSS 68
P PQPIS+ P FFLAA SLFVF+SSSSS+SFK NP RRFLK S
Sbjct: 9 PPPQPISDLPHLTRSPPLPDFFLAALSLFVFLSSSSSRSFKFPLLCIQSNP-RRFLKTPS 68
Query: 69 MSISNP----------RLRPFSSPQSLSNWLKPRLPTDSFASWGVKPGTKNIHNLWLELS 128
MS S+P RL PF+SPQSLS+WLKPRLP+DSFASWGVKPGTKN+HNLWLELS
Sbjct: 69 MSFSHPNSGRTPHDAHRLHPFTSPQSLSDWLKPRLPSDSFASWGVKPGTKNVHNLWLELS 128
Query: 129 HGETSLADSTPPVRTLQVLSLRILDTHRRFLLESHQELSDGSIRVRNRPLSEKMKPNETP 188
GETSLADS PP+RT+QVLSLRI+D HRR LLESHQ+LSDG++R RNRPLSEKMKPNETP
Sbjct: 129 EGETSLADSNPPIRTVQVLSLRIIDNHRRILLESHQQLSDGTLRNRNRPLSEKMKPNETP 188
Query: 189 ESAVFRAVKEELGSVLVGSDCNKIVRIVPDSYRVRVEERDSVSYPGLPACYVLHSLDVWV 248
ESAV+RAVKEELGS+L SDC++IV+IVPDSY++++EER+S SYPGLPACYVLHS+DV V
Sbjct: 189 ESAVYRAVKEELGSILGDSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVLHSMDVVV 248
Query: 249 EGLPEGEFCTVEEEEYENSEELSVADEAVSVKKHFWKWVSSDSLD 269
EGLP+ +FCTVEEEEY NSEE S+ADEAVSVKKHFWKWVS DSLD
Sbjct: 249 EGLPKEDFCTVEEEEYVNSEETSIADEAVSVKKHFWKWVSLDSLD 292
BLAST of Sed0003210 vs. NCBI nr
Match:
KAG6579291.1 (hypothetical protein SDJN03_23739, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 397.1 bits (1019), Expect = 1.2e-106
Identity = 202/267 (75.66%), Postives = 229/267 (85.77%), Query Frame = 0
Query: 18 PPFFLAAFSLFVFISSSSSKSFK------SKNPHRRFLKKSSMSISNP----------RL 77
P FFLAA SLFVF+SSSSS+SFK NP RRFLK SMS S+P RL
Sbjct: 61 PDFFLAALSLFVFLSSSSSRSFKFPLLCIQSNP-RRFLKTPSMSFSHPNSGRTPHDAHRL 120
Query: 78 RPFSSPQSLSNWLKPRLPTDSFASWGVKPGTKNIHNLWLELSHGETSLADSTPPVRTLQV 137
PF+SPQSLS+WLKPRLP+DSFASWGVKPGTKN+HNLWLELS GETSLADS PP+RT+QV
Sbjct: 121 HPFTSPQSLSDWLKPRLPSDSFASWGVKPGTKNVHNLWLELSEGETSLADSNPPIRTVQV 180
Query: 138 LSLRILDTHRRFLLESHQELSDGSIRVRNRPLSEKMKPNETPESAVFRAVKEELGSVLVG 197
LSLRI+D HRR LLESHQ+LSDG++R RNRPLSEKMKPNETPESAV+RAVKEELGS+L
Sbjct: 181 LSLRIIDNHRRILLESHQQLSDGTLRNRNRPLSEKMKPNETPESAVYRAVKEELGSILGD 240
Query: 198 SDCNKIVRIVPDSYRVRVEERDSVSYPGLPACYVLHSLDVWVEGLPEGEFCTVEEEEYEN 257
SDC++IV+IVPDSY++++EER+S SYPGLPACYVLHS+DV VEGLP+ +FCTVEEEEY N
Sbjct: 241 SDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVLHSMDVLVEGLPKEDFCTVEEEEYVN 300
Query: 258 SEELSVADEAVSVKKHFWKWVSSDSLD 269
SEE S+ADEAVSVKKHFWKWVS DSLD
Sbjct: 301 SEETSIADEAVSVKKHFWKWVSLDSLD 326
BLAST of Sed0003210 vs. NCBI nr
Match:
XP_022138298.1 (uncharacterized protein LOC111009508 [Momordica charantia])
HSP 1 Score: 386.0 bits (990), Expect = 2.7e-103
Identity = 205/295 (69.49%), Postives = 237/295 (80.34%), Query Frame = 0
Query: 1 MILDLDMP----PIPQPISN---------FPPFFLAAFSLFVFISSSSSKSFK------S 60
MILD+ P P P PISN P F+LAA SLFVF SSSSKSFK
Sbjct: 1 MILDMPSPPPPLPPPHPISNLTHLNKSTPLPDFWLAALSLFVFF-SSSSKSFKFPLLPFQ 60
Query: 61 KNPHRRFLKKSSMSISNPRLRP------FSSPQSLSNWLKPRLPTDSFASWGVKPGTKNI 120
NPHRRFLK SMS+S+P + F+SPQSLS+WL PRLP+DSFASWGVKPGTKN+
Sbjct: 61 FNPHRRFLKIPSMSLSHPHPKTRLDNHHFASPQSLSDWLGPRLPSDSFASWGVKPGTKNV 120
Query: 121 HNLWLELSHGETSLADSTPPVRTLQVLSLRILDTHRRFLLESHQELSDGSIRVRNRPLSE 180
HNLWLE+S GETSLADS PP+RT+QV+SLRILD H R L+ESHQELSDG++R RNRPLSE
Sbjct: 121 HNLWLEISEGETSLADSNPPIRTVQVVSLRILDKHNRVLVESHQELSDGTLRNRNRPLSE 180
Query: 181 KMKPNETPESAVFRAVKEELGSVLVGSDCNKIVRIVPDSYRVRVEERDSVSYPGLPACYV 240
KMKPNETPESAV+RAVKEELGS++ DC +IVRIVP+SY++++EER+SVSYPGLPACYV
Sbjct: 181 KMKPNETPESAVYRAVKEELGSIIGDLDCCEIVRIVPNSYKMKIEERNSVSYPGLPACYV 240
Query: 241 LHSLDVWVEGLPEGEFCTVEEEEYENSEELSVADE-AVSVKKHFWKWVSSDSLDS 270
LHS+DVWVEGLP+ EFCTVEEEEYE SEE +A + AVSVKKHFWKWVS+DS+DS
Sbjct: 241 LHSMDVWVEGLPDEEFCTVEEEEYEKSEETEIAHKAAVSVKKHFWKWVSADSVDS 294
BLAST of Sed0003210 vs. ExPASy TrEMBL
Match:
A0A6J1IA21 (uncharacterized protein LOC111472979 OS=Cucurbita maxima OX=3661 GN=LOC111472979 PE=4 SV=1)
HSP 1 Score: 403.3 bits (1035), Expect = 8.0e-109
Identity = 209/285 (73.33%), Postives = 237/285 (83.16%), Query Frame = 0
Query: 9 PIPQPISN---------FPPFFLAAFSLFVFISSSSSKSFK------SKNPHRRFLKKSS 68
P PQPIS+ P FFLAA SLFVF+SSSSS+SFK NP RRFLK S
Sbjct: 9 PPPQPISDLPHLTRSPPLPDFFLAALSLFVFLSSSSSRSFKLPLLCIQSNP-RRFLKTPS 68
Query: 69 MSISNP----------RLRPFSSPQSLSNWLKPRLPTDSFASWGVKPGTKNIHNLWLELS 128
MS S+P RL PF+SPQSLS+WLKPRLP+DSFASWGVKPGTKN+HNLWLELS
Sbjct: 69 MSFSHPNSGRTPHDAHRLHPFASPQSLSDWLKPRLPSDSFASWGVKPGTKNVHNLWLELS 128
Query: 129 HGETSLADSTPPVRTLQVLSLRILDTHRRFLLESHQELSDGSIRVRNRPLSEKMKPNETP 188
GETSLADSTPP+RT+QVLSLRI+D HRR LLESHQ+LSDG++R RNRPLSEKMKPNETP
Sbjct: 129 EGETSLADSTPPIRTVQVLSLRIIDNHRRILLESHQQLSDGTLRNRNRPLSEKMKPNETP 188
Query: 189 ESAVFRAVKEELGSVLVGSDCNKIVRIVPDSYRVRVEERDSVSYPGLPACYVLHSLDVWV 248
ESAV+RAVKEELGS+L SDC++IV+IVPDSY++++EER+S SYPGLPACYVLHS+DV V
Sbjct: 189 ESAVYRAVKEELGSILGDSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVLHSMDVLV 248
Query: 249 EGLPEGEFCTVEEEEYENSEELSVADEAVSVKKHFWKWVSSDSLD 269
EGLP+ +FCTVEEEEY NSEE S+ADEAVSVKKHFWKWVS DSLD
Sbjct: 249 EGLPKEDFCTVEEEEYANSEESSIADEAVSVKKHFWKWVSLDSLD 292
BLAST of Sed0003210 vs. ExPASy TrEMBL
Match:
A0A6J1E2U8 (uncharacterized protein LOC111430319 OS=Cucurbita moschata OX=3662 GN=LOC111430319 PE=4 SV=1)
HSP 1 Score: 401.4 bits (1030), Expect = 3.0e-108
Identity = 208/285 (72.98%), Postives = 236/285 (82.81%), Query Frame = 0
Query: 9 PIPQPISN---------FPPFFLAAFSLFVFISSSSSKSFK------SKNPHRRFLKKSS 68
P PQPIS+ P FFLAA SLFVF+SSSSS+SFK NP RRFLK S
Sbjct: 9 PPPQPISDLPHLTRSPPLPDFFLAALSLFVFLSSSSSRSFKFPLLCIQSNP-RRFLKTPS 68
Query: 69 MSISNP----------RLRPFSSPQSLSNWLKPRLPTDSFASWGVKPGTKNIHNLWLELS 128
MS S+P RL PF+SPQSLS+WLKPRLP+DSFASWGVKPGTKN+HNLWLELS
Sbjct: 69 MSFSHPNSGRTPHDAHRLHPFTSPQSLSDWLKPRLPSDSFASWGVKPGTKNVHNLWLELS 128
Query: 129 HGETSLADSTPPVRTLQVLSLRILDTHRRFLLESHQELSDGSIRVRNRPLSEKMKPNETP 188
GETSLADS PP+RT+QVLSLRI+D HRR LLESHQ+LSDG++R RNRPLSEKMKPNETP
Sbjct: 129 EGETSLADSNPPIRTVQVLSLRIIDNHRRILLESHQQLSDGTLRNRNRPLSEKMKPNETP 188
Query: 189 ESAVFRAVKEELGSVLVGSDCNKIVRIVPDSYRVRVEERDSVSYPGLPACYVLHSLDVWV 248
ESAV+RAVKEELGS+L SDC++IV+IVPDSY++++EER+S SYPGLPACYVLHS+DV V
Sbjct: 189 ESAVYRAVKEELGSILGDSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVLHSMDVLV 248
Query: 249 EGLPEGEFCTVEEEEYENSEELSVADEAVSVKKHFWKWVSSDSLD 269
EGLP+ +FCTVEEEEY NSEE S+ADEAVSVKKHFWKWVS DSLD
Sbjct: 249 EGLPKEDFCTVEEEEYVNSEETSIADEAVSVKKHFWKWVSLDSLD 292
BLAST of Sed0003210 vs. ExPASy TrEMBL
Match:
A0A6J1CCN3 (uncharacterized protein LOC111009508 OS=Momordica charantia OX=3673 GN=LOC111009508 PE=4 SV=1)
HSP 1 Score: 386.0 bits (990), Expect = 1.3e-103
Identity = 205/295 (69.49%), Postives = 237/295 (80.34%), Query Frame = 0
Query: 1 MILDLDMP----PIPQPISN---------FPPFFLAAFSLFVFISSSSSKSFK------S 60
MILD+ P P P PISN P F+LAA SLFVF SSSSKSFK
Sbjct: 1 MILDMPSPPPPLPPPHPISNLTHLNKSTPLPDFWLAALSLFVFF-SSSSKSFKFPLLPFQ 60
Query: 61 KNPHRRFLKKSSMSISNPRLRP------FSSPQSLSNWLKPRLPTDSFASWGVKPGTKNI 120
NPHRRFLK SMS+S+P + F+SPQSLS+WL PRLP+DSFASWGVKPGTKN+
Sbjct: 61 FNPHRRFLKIPSMSLSHPHPKTRLDNHHFASPQSLSDWLGPRLPSDSFASWGVKPGTKNV 120
Query: 121 HNLWLELSHGETSLADSTPPVRTLQVLSLRILDTHRRFLLESHQELSDGSIRVRNRPLSE 180
HNLWLE+S GETSLADS PP+RT+QV+SLRILD H R L+ESHQELSDG++R RNRPLSE
Sbjct: 121 HNLWLEISEGETSLADSNPPIRTVQVVSLRILDKHNRVLVESHQELSDGTLRNRNRPLSE 180
Query: 181 KMKPNETPESAVFRAVKEELGSVLVGSDCNKIVRIVPDSYRVRVEERDSVSYPGLPACYV 240
KMKPNETPESAV+RAVKEELGS++ DC +IVRIVP+SY++++EER+SVSYPGLPACYV
Sbjct: 181 KMKPNETPESAVYRAVKEELGSIIGDLDCCEIVRIVPNSYKMKIEERNSVSYPGLPACYV 240
Query: 241 LHSLDVWVEGLPEGEFCTVEEEEYENSEELSVADE-AVSVKKHFWKWVSSDSLDS 270
LHS+DVWVEGLP+ EFCTVEEEEYE SEE +A + AVSVKKHFWKWVS+DS+DS
Sbjct: 241 LHSMDVWVEGLPDEEFCTVEEEEYEKSEETEIAHKAAVSVKKHFWKWVSADSVDS 294
BLAST of Sed0003210 vs. ExPASy TrEMBL
Match:
A0A1S3AUP2 (uncharacterized protein LOC103483001 OS=Cucumis melo OX=3656 GN=LOC103483001 PE=4 SV=1)
HSP 1 Score: 374.8 bits (961), Expect = 3.1e-100
Identity = 196/282 (69.50%), Postives = 227/282 (80.50%), Query Frame = 0
Query: 8 PPIPQPISN----------FPPFFLAAFSLFVFISSSS-SKSFK------SKNPHRRFLK 67
PP PQPISN P FFLAA SLF F SSSS SKSFK NP RRFLK
Sbjct: 14 PPQPQPISNLTHLNKSTAALPDFFLAALSLFAFFSSSSPSKSFKFPAFSIQLNP-RRFLK 73
Query: 68 KSSMSI----SNPRLRPFSSPQSLSNWLKPRLPTDSFASWGVKPGTKNIHNLWLELSHGE 127
S S+ SN + F+SPQSLS WL+PRLP+ SFASWGV PGTKN+HNLWLE+S GE
Sbjct: 74 IPSNSMEFPNSNSKSLTFTSPQSLSEWLQPRLPSHSFASWGVIPGTKNLHNLWLEISQGE 133
Query: 128 TSLADSTPPVRTLQVLSLRILDTHRRFLLESHQELSDGSIRVRNRPLSEKMKPNETPESA 187
TSLADS PP+R L VLSLRI+D H R LLESHQ+LSDG++R RNRPLSEKMKPNETPESA
Sbjct: 134 TSLADSNPPIRILHVLSLRIIDNHHRLLLESHQQLSDGTLRNRNRPLSEKMKPNETPESA 193
Query: 188 VFRAVKEELGSVLVGSDCNKIVRIVPDSYRVRVEERDSVSYPGLPACYVLHSLDVWVEGL 247
V+RAV+EELGS+L SDC+ +VRIVPDSY++++EERDSVSYPGLPACYVLHS+D+ VEGL
Sbjct: 194 VYRAVQEELGSILADSDCSPLVRIVPDSYKLKIEERDSVSYPGLPACYVLHSMDIRVEGL 253
Query: 248 PEGEFCTVEEEEYENSEELSVADEAVSVKKHFWKWVSSDSLD 269
P+G+FCTVE+EEY NSEE ++AD+AVSVKKHFWKWVS +S+D
Sbjct: 254 PDGDFCTVEKEEYVNSEETNIADQAVSVKKHFWKWVSPESVD 294
BLAST of Sed0003210 vs. ExPASy TrEMBL
Match:
A0A0A0KJQ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139030 PE=4 SV=1)
HSP 1 Score: 372.1 bits (954), Expect = 2.0e-99
Identity = 196/283 (69.26%), Postives = 227/283 (80.21%), Query Frame = 0
Query: 8 PPIPQPISN----------FPPFFLAAFSLFVFI--SSSSSKSFK------SKNPHRRFL 67
PP PQPISN P FFLAA SLF F+ SSSSSKSFK NP RRF
Sbjct: 12 PPQPQPISNLTHLNKSKAALPDFFLAALSLFAFLSSSSSSSKSFKFPAFSIQLNP-RRFF 71
Query: 68 KKSSMSI----SNPRLRPFSSPQSLSNWLKPRLPTDSFASWGVKPGTKNIHNLWLELSHG 127
K S+S+ SN + F+SPQSLS WL+PRLP+ SFASWGV PGTKN+HNLWLE+S G
Sbjct: 72 KIPSISMEFPNSNSKSLTFTSPQSLSEWLQPRLPSHSFASWGVIPGTKNLHNLWLEISQG 131
Query: 128 ETSLADSTPPVRTLQVLSLRILDTHRRFLLESHQELSDGSIRVRNRPLSEKMKPNETPES 187
ETSLADS PP+RTL VLSLRI+D H R LLESHQ+LSDG++R RNRPLSEKMKPNETPES
Sbjct: 132 ETSLADSNPPIRTLHVLSLRIIDNHHRLLLESHQQLSDGTLRNRNRPLSEKMKPNETPES 191
Query: 188 AVFRAVKEELGSVLVGSDCNKIVRIVPDSYRVRVEERDSVSYPGLPACYVLHSLDVWVEG 247
AV+RAV+EELGS+L SD +++VRIVPDSYR+++EERDSVSYPGL A YVLHS+DVWVEG
Sbjct: 192 AVYRAVQEELGSILGDSDYSQLVRIVPDSYRLKIEERDSVSYPGLSASYVLHSMDVWVEG 251
Query: 248 LPEGEFCTVEEEEYENSEELSVADEAVSVKKHFWKWVSSDSLD 269
LP+G+FCTVEEEEY NSE+ ++AD AVSVKKHFWKWVS +S+D
Sbjct: 252 LPDGDFCTVEEEEYVNSEDTNIADHAVSVKKHFWKWVSPESVD 293
BLAST of Sed0003210 vs. TAIR 10
Match:
AT5G24460.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 275.0 bits (702), Expect = 6.3e-74
Identity = 154/274 (56.20%), Postives = 196/274 (71.53%), Query Frame = 0
Query: 15 SNFPPFFLAAFSLFVFISSSS-------SKSFKSKNPHRRFLKKSSMSISNPRLRP---- 74
S P FLAA SL SS ++ NP RR + ++MS +P P
Sbjct: 30 SALPDIFLAAVSLLFLWSSPKPLVSLPPNRFSFPLNPRRRSI--TAMSRRSPPPPPPTQR 89
Query: 75 FSSPQSLSNWLKPRLPTDSFASWGVKPGTKNIHNLWLELSHGETSLADSTPPVRTLQVLS 134
F++PQSLS+WL+ RLP+DSFA+WGVKPGTKN+HNLWLELS GETSLADSTPPVRT+ V++
Sbjct: 90 FANPQSLSDWLESRLPSDSFAAWGVKPGTKNVHNLWLELSDGETSLADSTPPVRTVNVVT 149
Query: 135 LRILDTHRRFLLESHQELSDGSIRVRNRPLSEKMKPNETPESAVFRAVKEELGSVLVGSD 194
+R++ + R L+E+HQELSDGSIR R RPLSEKMKP E+P+ AVFRA+KEELGS+ G
Sbjct: 150 VRVIGKNGRILVEAHQELSDGSIRERFRPLSEKMKPEESPDEAVFRAIKEELGSIFNGDG 209
Query: 195 CN--KIVRIVPDSYRVRVEERDSVSYPGLPACYVLHSLDVWVEGLPEGEFCTVEEEEYE- 254
N + ++I+P +Y RVEER+S+SYPGLPA Y LHS++ VEGLPE +FCT EE+EYE
Sbjct: 210 DNIGQRIKILPGTYNRRVEERNSLSYPGLPARYALHSVNATVEGLPEQDFCT-EEKEYEG 269
Query: 255 -----NSEELSVADEAVSVKKHFWKWVSSDSLDS 270
+S E A AV+VK+H+WKWVS DS+ S
Sbjct: 270 GDSTKDSVETLAAGNAVTVKRHYWKWVSPDSIRS 300
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022974352.1 | 1.7e-108 | 73.33 | uncharacterized protein LOC111472979 [Cucurbita maxima] | [more] |
| XP_022922297.1 | 6.3e-108 | 72.98 | uncharacterized protein LOC111430319 [Cucurbita moschata] >KAG7025097.1 hypothet... | [more] |
| XP_023550799.1 | 8.2e-108 | 72.98 | uncharacterized protein LOC111808831 [Cucurbita pepo subsp. pepo] | [more] |
| KAG6579291.1 | 1.2e-106 | 75.66 | hypothetical protein SDJN03_23739, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| XP_022138298.1 | 2.7e-103 | 69.49 | uncharacterized protein LOC111009508 [Momordica charantia] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1IA21 | 8.0e-109 | 73.33 | uncharacterized protein LOC111472979 OS=Cucurbita maxima OX=3661 GN=LOC111472979... | [more] |
| A0A6J1E2U8 | 3.0e-108 | 72.98 | uncharacterized protein LOC111430319 OS=Cucurbita moschata OX=3662 GN=LOC1114303... | [more] |
| A0A6J1CCN3 | 1.3e-103 | 69.49 | uncharacterized protein LOC111009508 OS=Momordica charantia OX=3673 GN=LOC111009... | [more] |
| A0A1S3AUP2 | 3.1e-100 | 69.50 | uncharacterized protein LOC103483001 OS=Cucumis melo OX=3656 GN=LOC103483001 PE=... | [more] |
| A0A0A0KJQ6 | 2.0e-99 | 69.26 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139030 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G24460.1 | 6.3e-74 | 56.20 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall;... | [more] |
