Sed0003203 (gene) Chayote v1

Overview


Name	Sed0003203
Type	gene
Organism	Sechium edule (Chayote v1)
Description	auxin-responsive protein SAUR21-like
Location	LG01: 1851404 .. 1852028 (+)
RNA-Seq Expression	Sed0003203
Synteny	Sed0003203

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGTAGGCCTTCTCATACACCAACTTGATACTGTTTGCCTTCATCAATCTCAATCCATAAATACAGACCAAATTAACTTCAATCCCCAACTCAAATTTCAAACACATCCTCATTTGAGCACTAAACTTCCAAACTTCTAGTTCTGTACTAAGCAGAAAACCTTTCGAAAGTCGACATGGGAATCAGATTACCTTCACTTCTCCTGAATGCCAAGCAAGTTGTCAAAATGCATACCACTTCTTCGAGAAACCAGTGCGGTGTTCCCAAAGGCCATATTGCAGTCTATGTGGGAGATATTGAAAGAAAGCGATTCGTAGTTCCAATATCATACTTGAACCATCCTTCTTTTTCAGCTTTGCTCAAAAGTGCAGAAGAAGAGTTTGGATTTAAGCATCCAACTGGAGGCTTGACAATTCCTTGCAGAGAAGATGTCTTCATCAACCTCACATCCAGGCTGAAAACTTTCTGAAAGAGAGAAGAACAAAAATCCTCCACACAGTTTTGCTAGTTAGGAGTAGAAATCAATGTATAGTTAGTTTCAACATCTTAGTGATCAAGCAGCTGATAGGATCATTGCCTATCTGCCTGAACATCATTTACACAACTTACAATTACAGAGCTGTAA

mRNA sequence

AAGTAGGCCTTCTCATACACCAACTTGATACTGTTTGCCTTCATCAATCTCAATCCATAAATACAGACCAAATTAACTTCAATCCCCAACTCAAATTTCAAACACATCCTCATTTGAGCACTAAACTTCCAAACTTCTAGTTCTGTACTAAGCAGAAAACCTTTCGAAAGTCGACATGGGAATCAGATTACCTTCACTTCTCCTGAATGCCAAGCAAGTTGTCAAAATGCATACCACTTCTTCGAGAAACCAGTGCGGTGTTCCCAAAGGCCATATTGCAGTCTATGTGGGAGATATTGAAAGAAAGCGATTCGTAGTTCCAATATCATACTTGAACCATCCTTCTTTTTCAGCTTTGCTCAAAAGTGCAGAAGAAGAGTTTGGATTTAAGCATCCAACTGGAGGCTTGACAATTCCTTGCAGAGAAGATGTCTTCATCAACCTCACATCCAGGCTGAAAACTTTCTGAAAGAGAGAAGAACAAAAATCCTCCACACAGTTTTGCTAGTTAGGAGTAGAAATCAATGTATAGTTAGTTTCAACATCTTAGTGATCAAGCAGCTGATAGGATCATTGCCTATCTGCCTGAACATCATTTACACAACTTACAATTACAGAGCTGTAA

Coding sequence (CDS)

ATGGGAATCAGATTACCTTCACTTCTCCTGAATGCCAAGCAAGTTGTCAAAATGCATACCACTTCTTCGAGAAACCAGTGCGGTGTTCCCAAAGGCCATATTGCAGTCTATGTGGGAGATATTGAAAGAAAGCGATTCGTAGTTCCAATATCATACTTGAACCATCCTTCTTTTTCAGCTTTGCTCAAAAGTGCAGAAGAAGAGTTTGGATTTAAGCATCCAACTGGAGGCTTGACAATTCCTTGCAGAGAAGATGTCTTCATCAACCTCACATCCAGGCTGAAAACTTTCTGA

Protein sequence

MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLKTF

Homology

[Close]

BLAST of Sed0003203 vs. NCBI nr
Match: KGN61882.1 (hypothetical protein Csa_006681 [Cucumis sativus])

HSP 1 Score: 191.4 bits (485), Expect = 3.6e-45
Identity = 91/95 (95.79%), Postives = 93/95 (97.89%), Query Frame = 0


Query: 1  MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSA 60
          MGIRLPSLLLNAKQV KMHT SSRNQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSA
Sbjct: 1  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60

Query: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLK 96
          LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRL+
Sbjct: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ 95

[Close]

BLAST of Sed0003203 vs. NCBI nr
Match: XP_008457637.1 (PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo] >KAA0045679.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa] >TYJ99605.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa])

HSP 1 Score: 189.9 bits (481), Expect = 1.0e-44
Identity = 90/95 (94.74%), Postives = 92/95 (96.84%), Query Frame = 0


Query: 1  MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSA 60
          MGIRLPSLL NAKQV KMHT SSRNQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSA
Sbjct: 1  MGIRLPSLLFNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60

Query: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLK 96
          LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRL+
Sbjct: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ 95

[Close]

BLAST of Sed0003203 vs. NCBI nr
Match: XP_022986729.1 (auxin-responsive protein SAUR21-like [Cucurbita maxima])

HSP 1 Score: 189.9 bits (481), Expect = 1.0e-44
Identity = 91/96 (94.79%), Postives = 93/96 (96.88%), Query Frame = 0


Query: 1  MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSA 60
          MGIRLPSLLLNAKQVVKM T  SRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSA
Sbjct: 1  MGIRLPSLLLNAKQVVKMQTVPSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSA 60

Query: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLKT 97
          LLK+AEEEFGFKHPTGGLTIPCREDVFINLTSRL+T
Sbjct: 61 LLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQT 96

[Close]

BLAST of Sed0003203 vs. NCBI nr
Match: KAG6571049.1 (Auxin-responsive protein SAUR20, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 189.5 bits (480), Expect = 1.4e-44
Identity = 90/96 (93.75%), Postives = 93/96 (96.88%), Query Frame = 0


Query: 1  MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSA 60
          MGIRLPSLLLNAKQ+VKM T SSRNQCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSA
Sbjct: 1  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSA 60

Query: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLKT 97
          LLK+AEEEFGFKHPTGGLTIPCREDVFINLTSRL+T
Sbjct: 61 LLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQT 96

[Close]

BLAST of Sed0003203 vs. NCBI nr
Match: XP_022944352.1 (auxin-responsive protein SAUR21-like [Cucurbita moschata])

HSP 1 Score: 189.5 bits (480), Expect = 1.4e-44
Identity = 90/96 (93.75%), Postives = 93/96 (96.88%), Query Frame = 0


Query: 1   MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSA 60
           MGIRLPSLLLNAKQ+VKM T SSRNQCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSA
Sbjct: 40  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSA 99

Query: 61  LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLKT 97
           LLK+AEEEFGFKHPTGGLTIPCREDVFINLTSRL+T
Sbjct: 100 LLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQT 135

[Close]

BLAST of Sed0003203 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.6e-24
Identity = 52/87 (59.77%), Postives = 66/87 (75.86%), Query Frame = 0


Query: 9  LLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEE 68
          LL AK+++   TT++      PKG +AVYVG+ ++KR++VPISYLN PSF ALL  +EEE
Sbjct: 7  LLGAKKILSRSTTAA---SAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEE 66

Query: 69 FGFKHPTGGLTIPCREDVFINLTSRLK 96
          FGF HP GGLTIPC ED FIN+TSR +
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of Sed0003203 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 6.2e-24
Identity = 51/87 (58.62%), Postives = 65/87 (74.71%), Query Frame = 0


Query: 9  LLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEE 68
          LL AK+++   T +       PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +EEE
Sbjct: 7  LLGAKKILSRSTGAG---SAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEE 66

Query: 69 FGFKHPTGGLTIPCREDVFINLTSRLK 96
          FGF HP GGLTIPC ED FIN+TSRL+
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of Sed0003203 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 8.0e-24
Identity = 51/87 (58.62%), Postives = 66/87 (75.86%), Query Frame = 0


Query: 9  LLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEE 68
          LL AK+++   T S+      PKG +AVYVG+ ++KR++VP+SYL+ PSF ALL  +EEE
Sbjct: 7  LLGAKKILSRSTASA-----APKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFKHPTGGLTIPCREDVFINLTSRLK 96
          FGF HP GGLTIPC ED FIN+TSRL+
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLQ 88

[Close]

BLAST of Sed0003203 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.0e-23
Identity = 50/87 (57.47%), Postives = 65/87 (74.71%), Query Frame = 0


Query: 9  LLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEE 68
          LL AK+++   T +       PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +E+E
Sbjct: 7  LLGAKKILSRSTAA---VSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDE 66

Query: 69 FGFKHPTGGLTIPCREDVFINLTSRLK 96
          FGF HP GGLTIPC ED FIN+TSRL+
Sbjct: 67 FGFDHPMGGLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of Sed0003203 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.8e-23
Identity = 50/87 (57.47%), Postives = 65/87 (74.71%), Query Frame = 0


Query: 9  LLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEE 68
          LL AK+++   T +       PKG +AVYVG+ ++KR++VP+SYL+ PSF ALL  +EEE
Sbjct: 7  LLGAKKILSRSTAAG---SAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFKHPTGGLTIPCREDVFINLTSRLK 96
          FGF HP GGLTIPC ED FIN+TSRL+
Sbjct: 67 FGFAHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of Sed0003203 vs. ExPASy TrEMBL
Match: A0A0A0LM71 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258780 PE=3 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.7e-45
Identity = 91/95 (95.79%), Postives = 93/95 (97.89%), Query Frame = 0


Query: 1  MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSA 60
          MGIRLPSLLLNAKQV KMHT SSRNQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSA
Sbjct: 1  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60

Query: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLK 96
          LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRL+
Sbjct: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ 95

[Close]

BLAST of Sed0003203 vs. ExPASy TrEMBL
Match: A0A5D3BMR1 (Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001790 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 5.0e-45
Identity = 90/95 (94.74%), Postives = 92/95 (96.84%), Query Frame = 0


Query: 1  MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSA 60
          MGIRLPSLL NAKQV KMHT SSRNQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSA
Sbjct: 1  MGIRLPSLLFNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60

Query: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLK 96
          LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRL+
Sbjct: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ 95

[Close]

BLAST of Sed0003203 vs. ExPASy TrEMBL
Match: A0A6J1JGW3 (auxin-responsive protein SAUR21-like OS=Cucurbita maxima OX=3661 GN=LOC111484395 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 5.0e-45
Identity = 91/96 (94.79%), Postives = 93/96 (96.88%), Query Frame = 0


Query: 1  MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSA 60
          MGIRLPSLLLNAKQVVKM T  SRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSA
Sbjct: 1  MGIRLPSLLLNAKQVVKMQTVPSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSA 60

Query: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLKT 97
          LLK+AEEEFGFKHPTGGLTIPCREDVFINLTSRL+T
Sbjct: 61 LLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQT 96

[Close]

BLAST of Sed0003203 vs. ExPASy TrEMBL
Match: A0A1S3C787 (auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC103497285 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 5.0e-45
Identity = 90/95 (94.74%), Postives = 92/95 (96.84%), Query Frame = 0


Query: 1  MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSA 60
          MGIRLPSLL NAKQV KMHT SSRNQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSA
Sbjct: 1  MGIRLPSLLFNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60

Query: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLK 96
          LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRL+
Sbjct: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ 95

[Close]

BLAST of Sed0003203 vs. ExPASy TrEMBL
Match: A0A6J1FVH4 (auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC111448819 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 6.6e-45
Identity = 90/96 (93.75%), Postives = 93/96 (96.88%), Query Frame = 0


Query: 1   MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSA 60
           MGIRLPSLLLNAKQ+VKM T SSRNQCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSA
Sbjct: 40  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSA 99

Query: 61  LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLKT 97
           LLK+AEEEFGFKHPTGGLTIPCREDVFINLTSRL+T
Sbjct: 100 LLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQT 135

[Close]

BLAST of Sed0003203 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 118.6 bits (296), Expect = 2.7e-27
Identity = 55/97 (56.70%), Postives = 75/97 (77.32%), Query Frame = 0


Query: 1  MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGD-IERKRFVVPISYLNHPSFS 60
          M IR+  +L ++KQ++K  + SS N   +PKGH+AVYVG+ ++++RFVVP++YL+HP F 
Sbjct: 1  MAIRISRVLQSSKQLLKSLSHSS-NNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 ALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLKT 97
           LL+ AEEEFGF HP GGLTIPC E +FI+L SRL T
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLST 96

[Close]

BLAST of Sed0003203 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 117.5 bits (293), Expect = 6.1e-27
Identity = 54/97 (55.67%), Postives = 74/97 (76.29%), Query Frame = 0


Query: 1  MGIRLPSLLLNAKQVVK----MHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHP 60
          M IR+P +L ++KQ+++    + ++SS +   VPKG++AVYVG+   KRFVVP+SYL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSR 94
          SF  LL+ AEEEFGF HP GGLTIPC E++FI+L SR
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of Sed0003203 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.0 bits (284), Expect = 6.7e-26
Identity = 57/105 (54.29%), Postives = 77/105 (73.33%), Query Frame = 0


Query: 1   MGIRLPSLLLNAKQVVKMHTTSSRNQCG------VPKGHIAVYVG---DIERKRFVVPIS 60
           MG+   ++    KQ++K+++ ++RN+        VPKGH+AVYVG   ++E+KRFVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINL-TSRLK 96
           +LNHPSF   L  AEEEFGF HP GGLTIPCRE+VF++L  SRL+
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]

BLAST of Sed0003203 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 113.2 bits (282), Expect = 1.1e-25
Identity = 52/87 (59.77%), Postives = 66/87 (75.86%), Query Frame = 0


Query: 9  LLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEE 68
          LL AK+++   TT++      PKG +AVYVG+ ++KR++VPISYLN PSF ALL  +EEE
Sbjct: 7  LLGAKKILSRSTTAA---SAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEE 66

Query: 69 FGFKHPTGGLTIPCREDVFINLTSRLK 96
          FGF HP GGLTIPC ED FIN+TSR +
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of Sed0003203 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 111.3 bits (277), Expect = 4.4e-25
Identity = 51/87 (58.62%), Postives = 65/87 (74.71%), Query Frame = 0


Query: 9  LLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEE 68
          LL AK+++   T +       PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +EEE
Sbjct: 7  LLGAKKILSRSTGAG---SAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEE 66

Query: 69 FGFKHPTGGLTIPCREDVFINLTSRLK 96
          FGF HP GGLTIPC ED FIN+TSRL+
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLQ 90

The following BLAST results are available for this feature:

BLAST of Sed0003203 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN61882.1	3.6e-45	95.79	hypothetical protein Csa_006681 [Cucumis sativus]	[more]
XP_008457637.1	1.0e-44	94.74	PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo] >KAA0045679.1 aux...	[more]
XP_022986729.1	1.0e-44	94.79	auxin-responsive protein SAUR21-like [Cucurbita maxima]	[more]
KAG6571049.1	1.4e-44	93.75	Auxin-responsive protein SAUR20, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022944352.1	1.4e-44	93.75	auxin-responsive protein SAUR21-like [Cucurbita moschata]	[more]

BLAST of Sed0003203 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJG0	1.6e-24	59.77	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]
Q9FK62	6.2e-24	58.62	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q9FJF9	8.0e-24	58.62	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 S...	[more]
Q9FJF7	1.0e-23	57.47	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 S...	[more]
Q9FJG1	1.8e-23	57.47	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 S...	[more]

BLAST of Sed0003203 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM71	1.7e-45	95.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258780 PE=3 SV=1	[more]
A0A5D3BMR1	5.0e-45	94.74	Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A6J1JGW3	5.0e-45	94.79	auxin-responsive protein SAUR21-like OS=Cucurbita maxima OX=3661 GN=LOC111484395...	[more]
A0A1S3C787	5.0e-45	94.74	auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC103497285 PE=...	[more]
A0A6J1FVH4	6.6e-45	93.75	auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC1114488...	[more]

BLAST of Sed0003203 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21210.1	2.7e-27	56.70	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	6.1e-27	55.67	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	6.7e-26	54.29	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	1.1e-25	59.77	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	4.4e-25	58.62	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 13..93 e-value: 1.2E-26 score: 92.7
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 1..96
None	No IPR available	PANTHER	PTHR31929:SF51	AUXIN-RESPONSIVE PROTEIN SAUR22-LIKE	coord: 1..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003203.1	Sed0003203.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin