Sed0003163 (gene) Chayote v1

Overview


Name	Sed0003163
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Ubiquitin-conjugating enzyme family protein
Location	LG07: 14407256 .. 14411186 (-)
RNA-Seq Expression	Sed0003163
Synteny	Sed0003163

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGATATCAATGCAACTAAAAGAAAGTGGAGCGGCGTGTTGTGATATAAAGCGTGGCGGGTGTGAGGTTTGGGCTGTAAGAGTCTGTGTGTATTTGTTTTCGTCTCCTTTTTCTGTCCTCTGCCGTTGCGGAGCCAAAGCCGAAGCATGACCAGCTCCTCCAACTCCGCTCGCAAGGTTTCCCCCTTTCCATCTCATTCCTCAACTTACTGTTCTTTGATTTCATTTTCATATTTTCAGATTTTGATTTCGATTCGATTTCATTGCTTTTCCAGGCTCTGAGTAAGATCGCTTGCAATCGCCTCCAGAAGGAGCTTGTCGAGTGGCAGCTCCACCCTCCCGCCGGTTTCAAACACAAGGTCACCGATAATCTCCAGAGGTTTTCCTTCTCTTACCCTTTTCTTTAAATTCTATGCTATGCCCTCCGATTCCTGTTTTTAGGGCTTACTTTAGGTCTGATTCTCTCGTCTGACTGATTTTTTCTCCCCTTTTTTGGGTTTCTTTTGAAATCGAAACGGGGTTTTCTTGTTTCTGATATGAAAGGAATTTTACTTTTTTTTTTGGGTTTTAGGTAGGAATTTTGATGTTTATTTTTGGGTGTTTTTTGTTGTTGTTGTTGGAAGGTGGGTGATTGAAGTCAACGGAGCTCCTGGAACTCTTTATTCCAATGAAACCTACCAGCTTCAGGTGGACTTTCCTGAGCATTACCCAATGGAAGCTCCTCAGGTCTAAGCATCAATCAATCATCCAATTCTGTGATTATTTCTGTTTCATAACTGCTTATCTTTGTTTACTGATTGTTGTGTGTTTGATGTTTTCTTTAACAGGTTATATTTCTGCATCCAGCTCCTCTGCATCCTCATATCTACAGCAATGGTCACATTTGTCTAGGTTCGTATCTGCATAATTTTCAATTGATTTCTTCTTGGTCATTCTGTTCTCTGCGTGTATACGTATACGTTTCTTGGTGGTTAGATTGTTTCCTTCCACATTTCACTCTTTTTAAGAGATTCCGGTTCTTCAGGAATGTCAAGTTTGTATTCTATTTGCTTTCCTCACTCTAGAGCATGCATAAATTAGGGGAATTTGGGGGAAGAAAGATTGTGTCAAGTTTACCAAATTTGTAGGTAGAAATAATTTCCCCAACCTCTTACTCCAACCCCTCCTCTAAAGGACCATATCTAAACAAAGTTTTTTTTTTTTATAATCAGTTGTCAAAAAACCTTTTTTCCTACAACCCCCTTCTCCAAACTATGTTTTTCTACAATTCCTCCTACTAACAACCTTAATCAAACAAGGTTTTCTCGCAACTACTCCTACAAATAACCTAGGAAGCACGGACACTTCTATTTTGACAACGTATCCGTGTCGTACTCGTGTCCAAAAATGATACTTTCGGATACTCGTTGGACTCGTGTCCGACACTCCAAATTCCTTGTCCTTTTTTGTTATTACTATTTTCGATTTTGGACACTTCATGGACACCTCAATTAAGACTTATTTGTTTCCAACGGTGGATGACACGACAACGGGTAGTGTTGGTGGAGGCCGTTGACGACGACGTCTATCGAAGATAGATGGACTAAAATGAAAAAAAAGGAAAGAAAGAGAGAAAATAAAATGGAGGGAAGGAAAATGAGATAAAAATTAAAATATTTAGAGATTATTACGGGTAGGCTTGTAACTAACTAAAATATTTTGGATTTCATTTTTTAATAGTACATAATAAAAAATACTCCTTGTGACAATACTCCAAGGGATGTCGCAGTGGTTGAAGATTTGGGCTTTGAGGGTATGCTCTCCTTAAGTCCCGAGTTCTAGTCTTTCGTGTGACAATACTCCTTTGATGTCTCCGGTGCCTGGCCTAGGGACGGGCGTGGTTACCTTATTTAAAAAAAAAAATAGTACATAATAAAAAATAATAATGAATCGCATGTCCTCGACGTATCCATGTCCTGCATTTTTAAATAATGACGTGTTTACTTGTCCGTGTCGTGTCCTTATCTCGTGTTCGTGTCCGTGCTTCTTAGCAAATAACTTTGTTCAAACAAAGTTTTTCTACAACCACTCACTCAAACATTATATTTAGACTACTCAATTCTTTTACTTACACTCAACTTACACTGTTTAAACTTTTTTTTAGCCATTTTCCATCTGCCTAGTTTTGAGTTTAGTGCTGTCGATAGGGATATTTTTAGGGTCAGACTTCAGTAGGTTGTACAATAATCGTAATGGTGTTTAATTGTATTCGACCCAAGTAGATATCATATTCAAATGGAGACGTTAATGGATTTTTCTACCATATACTGTTGGTACATTACCTTTAGGCTTATCAGTGACTCGTCATGGAACCTGAATGATTTGATGTTACAAAAAGGTTTGAAGTATATCCTGTCCTATTAGTTCAAGAGAAAGGAAATCACTTTATGTTGGATGTGACAACATGTTGTATAGAGGAAGTACTGCTTGATGTTGGATTTCGTTCCTTTTGGTAATAGCTAGATTTTATAGACGAAAATAACTCTTTTCTTAGAATTTATGTAAAAAAAAAAAAGTTCGCTAGCATGTTCGATTGTAATTGTTTTGTTTTTAACGCAAGTCTTTTAAAACTTGCATTTTATACTTTGTTTCAATATTTTTAATTCTTTAGGTGTGTTCATATTTGTTTATTTTAGCAATTTAAGTTTTGTTCATTTGTTTGGTTTTCTTTGGATGGAAGTTTGTCAAATTGAACCAAAGTATCAGTATTGATTTTGTTTATAAGATCTGGACAAAAGGAAAGGAATCTCAAACCAAACCAATTTAGTTCGGATCGTTGGTTTCGTTGGTTTCAAGCACCTTTTTTGTTTGAAGGTGAAGTTGGGAATATGCTTTATGGAACGTGCTAATTGCTCAAATGCACTATACATGGGTGACTGAAATTATGTGCCTTCCTATAATTTAATATGGTGGTGTAAAAGTTAAATATCTTACACCAACAAAAGCATAGCTCAACTGTGTGTGTTTATGACCCAAAGGTCATGAGTTGACAACAAGAACATAGCTCTACAGGTTAGACTTGTGACTTTGAGTTCAAAGACTAAGTGTTTGAATCTTCTCAGTCCAATTATTGTTGAACTATTAAATAGTTATGCTGGTTACTTTTTCCTCTCATACATGTTTCTCTAATCATCGTGTTGGTGTTTATTGCGCGTGCATGCTGAGTTTTGAATTCTATCCTAGTCGTGTTTATCTCTGAAATGGGTTTGTAAGTAGTCTATTGGCTTTGTCTGAGAACTTAGTTATCTCCTCCACAGCAACACTAACCATTGTTATATCCCTTTACTTTGGAATTATGTAGATATTTTGTACGATTCATGGTCGCCTGCAATGACGGTAAGTTCTATCTGTATCAGCATCCTCTCCATGCTGTCAAGCTCCACGGCAAAGGTCTGATACCTTCATTCCACTTTGATTCAATCCAATACATAATATGTCCCTCTTGGAGGTGCTGGAAATAGTATAAATCCTTGCATTCTACAAATCAATCTCTGATAGTCTTATTTTTTCTGTTGCAGCAACGCCCCGATGACAACGATCGATATGTAAAGAACTGTAGGAACGGAAGGTCTCCAAAAGAGACGAGGTGGTGGTTCCACGACGATAAGGTGTAATCTTCCATTGTTATGCCTGTGGCTTCCCTTGTTTGTAAGGTGAAAGAAATAGAAAATTGATTATTGAAAAAGAAAACCAAGTAAAGTGGTAAGGCCTGGCATTTGTAAAGGAAGATAAATTTATGTTTCTTACCAATGTCTAAAGAACAACTTCTCTTGTCCTTTCTTGTGGGGGATGGGGTTATCCTTCCTGGGTAAGAACCTCTTGTTACAAATTCATAATATCATAATACCCTCCTTCCTTTGACATTATATATAGTGGGTCTTTATAGTTTCAGTG

mRNA sequence

TGATATCAATGCAACTAAAAGAAAGTGGAGCGGCGTGTTGTGATATAAAGCGTGGCGGGTGTGAGGTTTGGGCTGTAAGAGTCTGTGTGTATTTGTTTTCGTCTCCTTTTTCTGTCCTCTGCCGTTGCGGAGCCAAAGCCGAAGCATGACCAGCTCCTCCAACTCCGCTCGCAAGGCTCTGAGTAAGATCGCTTGCAATCGCCTCCAGAAGGAGCTTGTCGAGTGGCAGCTCCACCCTCCCGCCGGTTTCAAACACAAGGTCACCGATAATCTCCAGAGGTGGGTGATTGAAGTCAACGGAGCTCCTGGAACTCTTTATTCCAATGAAACCTACCAGCTTCAGGTGGACTTTCCTGAGCATTACCCAATGGAAGCTCCTCAGGTTATATTTCTGCATCCAGCTCCTCTGCATCCTCATATCTACAGCAATGGTCACATTTGTCTAGATATTTTGTACGATTCATGGTCGCCTGCAATGACGGTAAGTTCTATCTGTATCAGCATCCTCTCCATGCTGTCAAGCTCCACGGCAAAGCAACGCCCCGATGACAACGATCGATATGTAAAGAACTGTAGGAACGGAAGGTCTCCAAAAGAGACGAGGTGGTGGTTCCACGACGATAAGGTGTAATCTTCCATTGTTATGCCTGTGGCTTCCCTTGTTTGTAAGGTGAAAGAAATAGAAAATTGATTATTGAAAAAGAAAACCAAGTAAAGTGGTAAGGCCTGGCATTTGTAAAGGAAGATAAATTTATGTTTCTTACCAATGTCTAAAGAACAACTTCTCTTGTCCTTTCTTGTGGGGGATGGGGTTATCCTTCCTGGGTAAGAACCTCTTGTTACAAATTCATAATATCATAATACCCTCCTTCCTTTGACATTATATATAGTGGGTCTTTATAGTTTCAGTG

Coding sequence (CDS)

ATGACCAGCTCCTCCAACTCCGCTCGCAAGGCTCTGAGTAAGATCGCTTGCAATCGCCTCCAGAAGGAGCTTGTCGAGTGGCAGCTCCACCCTCCCGCCGGTTTCAAACACAAGGTCACCGATAATCTCCAGAGGTGGGTGATTGAAGTCAACGGAGCTCCTGGAACTCTTTATTCCAATGAAACCTACCAGCTTCAGGTGGACTTTCCTGAGCATTACCCAATGGAAGCTCCTCAGGTTATATTTCTGCATCCAGCTCCTCTGCATCCTCATATCTACAGCAATGGTCACATTTGTCTAGATATTTTGTACGATTCATGGTCGCCTGCAATGACGGTAAGTTCTATCTGTATCAGCATCCTCTCCATGCTGTCAAGCTCCACGGCAAAGCAACGCCCCGATGACAACGATCGATATGTAAAGAACTGTAGGAACGGAAGGTCTCCAAAAGAGACGAGGTGGTGGTTCCACGACGATAAGGTGTAA

Protein sequence

MTSSSNSARKALSKIACNRLQKELVEWQLHPPAGFKHKVTDNLQRWVIEVNGAPGTLYSNETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV

Homology

[Close]

BLAST of Sed0003163 vs. NCBI nr
Match: XP_038877729.1 (probable ubiquitin-conjugating enzyme E2 16 [Benincasa hispida])

HSP 1 Score: 333.6 bits (854), Expect = 9.6e-88
Identity = 157/161 (97.52%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MTSSSNSARKALSKIACNRLQKELVEWQLHPPAGFKHKVTDNLQRWVIEVNGAPGTLYSN 60
           MTSSS+SARKALSKIACNRLQKEL+EWQL+PPAGFKHKVTDNLQRWVIEVNGAPGTLY+N
Sbjct: 1   MTSSSDSARKALSKIACNRLQKELLEWQLNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 161

[Close]

BLAST of Sed0003163 vs. NCBI nr
Match: XP_022942312.1 (probable ubiquitin-conjugating enzyme E2 16 [Cucurbita moschata] >XP_022983104.1 probable ubiquitin-conjugating enzyme E2 16 [Cucurbita maxima] >XP_023513778.1 probable ubiquitin-conjugating enzyme E2 16 [Cucurbita pepo subsp. pepo] >KAG6600596.1 putative ubiquitin-conjugating enzyme E2 16, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031233.1 putative ubiquitin-conjugating enzyme E2 16 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 333.6 bits (854), Expect = 9.6e-88
Identity = 157/161 (97.52%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MTSSSNSARKALSKIACNRLQKELVEWQLHPPAGFKHKVTDNLQRWVIEVNGAPGTLYSN 60
           MTSSS+SARKALSKIACNRLQKELVEWQ++PPAGFKHKVTDNLQRWVIEVNGAPGTLY+N
Sbjct: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 161

[Close]

BLAST of Sed0003163 vs. NCBI nr
Match: XP_022136917.1 (probable ubiquitin-conjugating enzyme E2 16 [Momordica charantia])

HSP 1 Score: 332.4 bits (851), Expect = 2.1e-87
Identity = 156/161 (96.89%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MTSSSNSARKALSKIACNRLQKELVEWQLHPPAGFKHKVTDNLQRWVIEVNGAPGTLYSN 60
           MTSSS++ARKALSKIACNRLQKELVEWQ++PPAGFKHKVTDNLQRWVIEVNGAPGTLY+N
Sbjct: 1   MTSSSDTARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 161

[Close]

BLAST of Sed0003163 vs. NCBI nr
Match: XP_004146492.2 (probable ubiquitin-conjugating enzyme E2 16 [Cucumis sativus] >XP_008452114.1 PREDICTED: probable ubiquitin-conjugating enzyme E2 16 [Cucumis melo] >KAA0044779.1 putative ubiquitin-conjugating enzyme E2 16 [Cucumis melo var. makuwa] >KGN53285.1 hypothetical protein Csa_014866 [Cucumis sativus])

HSP 1 Score: 330.9 bits (847), Expect = 6.3e-87
Identity = 156/161 (96.89%), Postives = 160/161 (99.38%), Query Frame = 0


Query: 1   MTSSSNSARKALSKIACNRLQKELVEWQLHPPAGFKHKVTDNLQRWVIEVNGAPGTLYSN 60
           MTSSS+SA KALSKIACNRLQKELVEWQ++PPAGFKHKVTDNLQRWVIEVNGAPGTLY+N
Sbjct: 1   MTSSSDSALKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 161

[Close]

BLAST of Sed0003163 vs. NCBI nr
Match: XP_022929509.1 (probable ubiquitin-conjugating enzyme E2 18 [Cucurbita moschata] >XP_022985349.1 probable ubiquitin-conjugating enzyme E2 18 [Cucurbita maxima] >XP_023553462.1 probable ubiquitin-conjugating enzyme E2 18 [Cucurbita pepo subsp. pepo] >KAG6577233.1 putative ubiquitin-conjugating enzyme E2 18, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 330.1 bits (845), Expect = 1.1e-86
Identity = 155/161 (96.27%), Postives = 160/161 (99.38%), Query Frame = 0


Query: 1   MTSSSNSARKALSKIACNRLQKELVEWQLHPPAGFKHKVTDNLQRWVIEVNGAPGTLYSN 60
           MTSSS+SARKALSKIACNRLQKELVEWQ++PPAGFKH+VTDNLQRWVIEVNGAPGTLY+N
Sbjct: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHRVTDNLQRWVIEVNGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSS AKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSPAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 161

[Close]

BLAST of Sed0003163 vs. ExPASy Swiss-Prot
Match: Q9FWT2 (Probable ubiquitin-conjugating enzyme E2 16 OS=Arabidopsis thaliana OX=3702 GN=UBC16 PE=2 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 7.4e-83
Identity = 143/161 (88.82%), Postives = 152/161 (94.41%), Query Frame = 0


Query: 1   MTSSSNSARKALSKIACNRLQKELVEWQLHPPAGFKHKVTDNLQRWVIEVNGAPGTLYSN 60
           M+SS   +RK LSKIA NRLQKELVEWQ++PP GFKHKVTDNLQRW+IEV GAPGTLY+N
Sbjct: 1   MSSSGAPSRKTLSKIATNRLQKELVEWQMNPPTGFKHKVTDNLQRWIIEVIGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           +TYQLQVDFPEHYPME+PQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  DTYQLQVDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSST KQRP DNDRYVKNC+NGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTEKQRPTDNDRYVKNCKNGRSPKETRWWFHDDKV 161

[Close]

BLAST of Sed0003163 vs. ExPASy Swiss-Prot
Match: Q9FMM0 (Probable ubiquitin-conjugating enzyme E2 18 OS=Arabidopsis thaliana OX=3702 GN=UBC18 PE=2 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 1.1e-81
Identity = 140/161 (86.96%), Postives = 152/161 (94.41%), Query Frame = 0


Query: 1   MTSSSNSARKALSKIACNRLQKELVEWQLHPPAGFKHKVTDNLQRWVIEVNGAPGTLYSN 60
           MTSSS+ +RKALSKIACNRLQKEL EWQ++PP GFKH+VTDNLQ+WVIEV GAPGTLY+N
Sbjct: 1   MTSSSSPSRKALSKIACNRLQKELSEWQVNPPTGFKHRVTDNLQKWVIEVTGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETY LQV+FP+HYPMEAPQVIF+ PAPLHPHIYSNGHICLDILYDSWSPAMTVSS+CISI
Sbjct: 61  ETYNLQVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSS  KQRP DNDRYVKNC+NGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSPEKQRPTDNDRYVKNCKNGRSPKETRWWFHDDKV 161

[Close]

BLAST of Sed0003163 vs. ExPASy Swiss-Prot
Match: P42743 (Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana OX=3702 GN=UBC15 PE=2 SV=2)

HSP 1 Score: 302.4 bits (773), Expect = 3.1e-81
Identity = 139/161 (86.34%), Postives = 151/161 (93.79%), Query Frame = 0


Query: 1   MTSSSNSARKALSKIACNRLQKELVEWQLHPPAGFKHKVTDNLQRWVIEVNGAPGTLYSN 60
           MTSSS  +RKALSKIACNRLQKEL EWQL+PP GF+HKVTDNLQ+W I+V GAPGTLY+N
Sbjct: 1   MTSSSAPSRKALSKIACNRLQKELSEWQLNPPTGFRHKVTDNLQKWTIDVTGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQV+FPEHYPMEAPQV+F+ PAP HPHIYSNGHICLDILYDSWSPAMTV+S+CISI
Sbjct: 61  ETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSS AKQRP DNDRYVKNC+NGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSPAKQRPADNDRYVKNCKNGRSPKETRWWFHDDKV 161

[Close]

BLAST of Sed0003163 vs. ExPASy Swiss-Prot
Match: O23239 (Probable ubiquitin-conjugating enzyme E2 17 OS=Arabidopsis thaliana OX=3702 GN=UBC17 PE=2 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 1.4e-76
Identity = 130/161 (80.75%), Postives = 148/161 (91.93%), Query Frame = 0


Query: 1   MTSSSNSARKALSKIACNRLQKELVEWQLHPPAGFKHKVTDNLQRWVIEVNGAPGTLYSN 60
           MTSSS S RK L+KIA NRLQKE +EWQ +PP+GFKH+V+DNLQRW+IEV+G PGTLY+N
Sbjct: 1   MTSSSESTRKGLTKIATNRLQKEFMEWQTNPPSGFKHRVSDNLQRWIIEVHGVPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQV+FPEHYPMEAPQVIF HPAPLHPHIYSNGHICLD+LYDSWSPAM +SSIC+SI
Sbjct: 61  ETYQLQVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSICLSI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSS+ KQ+P DND Y+KNC++GRSPKETRW FHDDKV
Sbjct: 121 LSMLSSSSVKQKPKDNDHYLKNCKHGRSPKETRWRFHDDKV 161

[Close]

BLAST of Sed0003163 vs. ExPASy Swiss-Prot
Match: Q55EY8 (Probable ubiquitin-conjugating enzyme E2 W OS=Dictyostelium discoideum OX=44689 GN=ube2w PE=3 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 4.9e-42
Identity = 80/143 (55.94%), Postives = 103/143 (72.03%), Query Frame = 0


Query: 19  RLQKELVEWQLHPPAGFKHKVTDNLQRWVIEVNGAPGTLYSNETYQLQVDFPEHYPMEAP 78
           RLQKEL++ + +PP        DNL +WVI V+G  G++Y  E ++LQ  F   YP+++P
Sbjct: 8   RLQKELLDLKTNPPPCISITEGDNLDKWVIAVDGTEGSIYQGEHFKLQFKFSSGYPLDSP 67

Query: 79  QVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSSSTAKQRPDDNDR 138
           +VIF+   P+HPHIYSNGHICL ILYD+WSPA+TVSS+C+SILSMLS  T K RP D+ +
Sbjct: 68  EVIFIGTPPIHPHIYSNGHICLSILYDNWSPALTVSSVCLSILSMLSGCTEKIRPTDDSK 127

Query: 139 YVKNCRNGRSPKETRWWFHDDKV 162
           YV    N +SPKE RW FHDD V
Sbjct: 128 YVSRVLN-KSPKEVRWMFHDDTV 149

[Close]

BLAST of Sed0003163 vs. ExPASy TrEMBL
Match: A0A6J1J6C9 (probable ubiquitin-conjugating enzyme E2 16 OS=Cucurbita maxima OX=3661 GN=LOC111481748 PE=3 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 4.7e-88
Identity = 157/161 (97.52%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MTSSSNSARKALSKIACNRLQKELVEWQLHPPAGFKHKVTDNLQRWVIEVNGAPGTLYSN 60
           MTSSS+SARKALSKIACNRLQKELVEWQ++PPAGFKHKVTDNLQRWVIEVNGAPGTLY+N
Sbjct: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 161

[Close]

BLAST of Sed0003163 vs. ExPASy TrEMBL
Match: A0A6J1FPW6 (probable ubiquitin-conjugating enzyme E2 16 OS=Cucurbita moschata OX=3662 GN=LOC111447396 PE=3 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 4.7e-88
Identity = 157/161 (97.52%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MTSSSNSARKALSKIACNRLQKELVEWQLHPPAGFKHKVTDNLQRWVIEVNGAPGTLYSN 60
           MTSSS+SARKALSKIACNRLQKELVEWQ++PPAGFKHKVTDNLQRWVIEVNGAPGTLY+N
Sbjct: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 161

[Close]

BLAST of Sed0003163 vs. ExPASy TrEMBL
Match: A0A6J1C6S5 (probable ubiquitin-conjugating enzyme E2 16 OS=Momordica charantia OX=3673 GN=LOC111008493 PE=3 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 1.0e-87
Identity = 156/161 (96.89%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MTSSSNSARKALSKIACNRLQKELVEWQLHPPAGFKHKVTDNLQRWVIEVNGAPGTLYSN 60
           MTSSS++ARKALSKIACNRLQKELVEWQ++PPAGFKHKVTDNLQRWVIEVNGAPGTLY+N
Sbjct: 1   MTSSSDTARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 161

[Close]

BLAST of Sed0003163 vs. ExPASy TrEMBL
Match: A0A5A7TU62 (Putative ubiquitin-conjugating enzyme E2 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00690 PE=3 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 3.0e-87
Identity = 156/161 (96.89%), Postives = 160/161 (99.38%), Query Frame = 0


Query: 1   MTSSSNSARKALSKIACNRLQKELVEWQLHPPAGFKHKVTDNLQRWVIEVNGAPGTLYSN 60
           MTSSS+SA KALSKIACNRLQKELVEWQ++PPAGFKHKVTDNLQRWVIEVNGAPGTLY+N
Sbjct: 1   MTSSSDSALKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 161

[Close]

BLAST of Sed0003163 vs. ExPASy TrEMBL
Match: A0A0A0KUH0 (UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G045000 PE=3 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 3.0e-87
Identity = 156/161 (96.89%), Postives = 160/161 (99.38%), Query Frame = 0


Query: 1   MTSSSNSARKALSKIACNRLQKELVEWQLHPPAGFKHKVTDNLQRWVIEVNGAPGTLYSN 60
           MTSSS+SA KALSKIACNRLQKELVEWQ++PPAGFKHKVTDNLQRWVIEVNGAPGTLY+N
Sbjct: 1   MTSSSDSALKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 161

[Close]

BLAST of Sed0003163 vs. TAIR 10
Match: AT1G75440.1 (ubiquitin-conjugating enzyme 16 )

HSP 1 Score: 307.8 bits (787), Expect = 5.3e-84
Identity = 143/161 (88.82%), Postives = 152/161 (94.41%), Query Frame = 0


Query: 1   MTSSSNSARKALSKIACNRLQKELVEWQLHPPAGFKHKVTDNLQRWVIEVNGAPGTLYSN 60
           M+SS   +RK LSKIA NRLQKELVEWQ++PP GFKHKVTDNLQRW+IEV GAPGTLY+N
Sbjct: 1   MSSSGAPSRKTLSKIATNRLQKELVEWQMNPPTGFKHKVTDNLQRWIIEVIGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           +TYQLQVDFPEHYPME+PQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  DTYQLQVDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSST KQRP DNDRYVKNC+NGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTEKQRPTDNDRYVKNCKNGRSPKETRWWFHDDKV 161

[Close]

BLAST of Sed0003163 vs. TAIR 10
Match: AT5G42990.1 (ubiquitin-conjugating enzyme 18 )

HSP 1 Score: 303.9 bits (777), Expect = 7.6e-83
Identity = 140/161 (86.96%), Postives = 152/161 (94.41%), Query Frame = 0


Query: 1   MTSSSNSARKALSKIACNRLQKELVEWQLHPPAGFKHKVTDNLQRWVIEVNGAPGTLYSN 60
           MTSSS+ +RKALSKIACNRLQKEL EWQ++PP GFKH+VTDNLQ+WVIEV GAPGTLY+N
Sbjct: 1   MTSSSSPSRKALSKIACNRLQKELSEWQVNPPTGFKHRVTDNLQKWVIEVTGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETY LQV+FP+HYPMEAPQVIF+ PAPLHPHIYSNGHICLDILYDSWSPAMTVSS+CISI
Sbjct: 61  ETYNLQVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSS  KQRP DNDRYVKNC+NGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSPEKQRPTDNDRYVKNCKNGRSPKETRWWFHDDKV 161

[Close]

BLAST of Sed0003163 vs. TAIR 10
Match: AT1G45050.1 (Ubiquitin-conjugating enzyme family protein )

HSP 1 Score: 302.4 bits (773), Expect = 2.2e-82
Identity = 139/161 (86.34%), Postives = 151/161 (93.79%), Query Frame = 0


Query: 1   MTSSSNSARKALSKIACNRLQKELVEWQLHPPAGFKHKVTDNLQRWVIEVNGAPGTLYSN 60
           MTSSS  +RKALSKIACNRLQKEL EWQL+PP GF+HKVTDNLQ+W I+V GAPGTLY+N
Sbjct: 1   MTSSSAPSRKALSKIACNRLQKELSEWQLNPPTGFRHKVTDNLQKWTIDVTGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQV+FPEHYPMEAPQV+F+ PAP HPHIYSNGHICLDILYDSWSPAMTV+S+CISI
Sbjct: 61  ETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSS AKQRP DNDRYVKNC+NGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSPAKQRPADNDRYVKNCKNGRSPKETRWWFHDDKV 161

[Close]

BLAST of Sed0003163 vs. TAIR 10
Match: AT4G36410.1 (ubiquitin-conjugating enzyme 17 )

HSP 1 Score: 287.0 bits (733), Expect = 9.6e-78
Identity = 130/161 (80.75%), Postives = 148/161 (91.93%), Query Frame = 0


Query: 1   MTSSSNSARKALSKIACNRLQKELVEWQLHPPAGFKHKVTDNLQRWVIEVNGAPGTLYSN 60
           MTSSS S RK L+KIA NRLQKE +EWQ +PP+GFKH+V+DNLQRW+IEV+G PGTLY+N
Sbjct: 1   MTSSSESTRKGLTKIATNRLQKEFMEWQTNPPSGFKHRVSDNLQRWIIEVHGVPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQV+FPEHYPMEAPQVIF HPAPLHPHIYSNGHICLD+LYDSWSPAM +SSIC+SI
Sbjct: 61  ETYQLQVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSICLSI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSS+ KQ+P DND Y+KNC++GRSPKETRW FHDDKV
Sbjct: 121 LSMLSSSSVKQKPKDNDHYLKNCKHGRSPKETRWRFHDDKV 161

[Close]

BLAST of Sed0003163 vs. TAIR 10
Match: AT2G16740.1 (ubiquitin-conjugating enzyme 29 )

HSP 1 Score: 85.5 bits (210), Expect = 4.3e-17
Identity = 47/122 (38.52%), Postives = 68/122 (55.74%), Query Frame = 0


Query: 15  IACNRLQKELVEWQLHPPAGFKHKVT-DNLQRWVIEVNGAPGTLYSNETYQLQVDFPEHY 74
           +A  R+ KEL E Q  PP       T +++  W   + G   + YS   + + + FP  Y
Sbjct: 1   MATRRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDY 60

Query: 75  PMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSSSTAKQRP 134
           P + P+V+F      HP+I SNG+ICLDIL D WSPA+T+S + +SI S+L+       P
Sbjct: 61  PFKPPKVVF-RTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTD----PNP 117

Query: 135 DD 136
           DD
Sbjct: 121 DD 117

The following BLAST results are available for this feature:

BLAST of Sed0003163 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877729.1	9.6e-88	97.52	probable ubiquitin-conjugating enzyme E2 16 [Benincasa hispida]	[more]
XP_022942312.1	9.6e-88	97.52	probable ubiquitin-conjugating enzyme E2 16 [Cucurbita moschata] >XP_022983104.1...	[more]
XP_022136917.1	2.1e-87	96.89	probable ubiquitin-conjugating enzyme E2 16 [Momordica charantia]	[more]
XP_004146492.2	6.3e-87	96.89	probable ubiquitin-conjugating enzyme E2 16 [Cucumis sativus] >XP_008452114.1 PR...	[more]
XP_022929509.1	1.1e-86	96.27	probable ubiquitin-conjugating enzyme E2 18 [Cucurbita moschata] >XP_022985349.1...	[more]

BLAST of Sed0003163 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FWT2	7.4e-83	88.82	Probable ubiquitin-conjugating enzyme E2 16 OS=Arabidopsis thaliana OX=3702 GN=U...	[more]
Q9FMM0	1.1e-81	86.96	Probable ubiquitin-conjugating enzyme E2 18 OS=Arabidopsis thaliana OX=3702 GN=U...	[more]
P42743	3.1e-81	86.34	Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana OX=3702 GN=UBC15 PE=2 SV...	[more]
O23239	1.4e-76	80.75	Probable ubiquitin-conjugating enzyme E2 17 OS=Arabidopsis thaliana OX=3702 GN=U...	[more]
Q55EY8	4.9e-42	55.94	Probable ubiquitin-conjugating enzyme E2 W OS=Dictyostelium discoideum OX=44689 ...	[more]

BLAST of Sed0003163 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J6C9	4.7e-88	97.52	probable ubiquitin-conjugating enzyme E2 16 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1FPW6	4.7e-88	97.52	probable ubiquitin-conjugating enzyme E2 16 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1C6S5	1.0e-87	96.89	probable ubiquitin-conjugating enzyme E2 16 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A5A7TU62	3.0e-87	96.89	Putative ubiquitin-conjugating enzyme E2 16 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A0A0KUH0	3.0e-87	96.89	UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G045000 PE...	[more]

BLAST of Sed0003163 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75440.1	5.3e-84	88.82	ubiquitin-conjugating enzyme 16	[more]
AT5G42990.1	7.6e-83	86.96	ubiquitin-conjugating enzyme 18	[more]
AT1G45050.1	2.2e-82	86.34	Ubiquitin-conjugating enzyme family protein	[more]
AT4G36410.1	9.6e-78	80.75	ubiquitin-conjugating enzyme 17	[more]
AT2G16740.1	4.3e-17	38.52	ubiquitin-conjugating enzyme 29	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 18..156 e-value: 1.2E-12 score: 58.0
None	No IPR available	PANTHER	PTHR24068:SF302	UBIQUITIN-CONJUGATING ENZYME E2 16-RELATED	coord: 11..102
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 11..102
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 11..117 e-value: 2.1E-27 score: 97.8
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 8..102
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 19..108 e-value: 3.7E-24 score: 85.0
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 15..157 score: 23.481678
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 17..114 e-value: 4.68188E-27 score: 96.8877

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003163.1	Sed0003163.1	mRNA
Sed0003163.2	Sed0003163.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0000209	protein polyubiquitination
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0071949	FAD binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0061631	ubiquitin conjugating enzyme activity