Homology
BLAST of Sed0003135 vs. NCBI nr
Match:
XP_022927385.1 (putative E3 ubiquitin-protein ligase RING1a [Cucurbita moschata] >XP_023519096.1 putative E3 ubiquitin-protein ligase RING1a [Cucurbita pepo subsp. pepo])
HSP 1 Score: 619.0 bits (1595), Expect = 3.5e-173
Identity = 346/437 (79.18%), Postives = 374/437 (85.58%), Query Frame = 0
Query: 1 MPAQKRAPESSEDDPLKLGHGFS----KDEDADESDRSASSSSNEEKDEYVFYFATFRVL 60
MPA+KRAPESSEDD LKL HG S +D DADESDRS SSSSN EKDE++ L
Sbjct: 1 MPAKKRAPESSEDDSLKLDHGCSAARPEDGDADESDRSTSSSSNGEKDEFIVV-----KL 60
Query: 61 FFVFFSIDYYVALNRIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 120
+ + + L IIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR
Sbjct: 61 SDIRKEVQCPICLG-IIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 120
Query: 121 DDPNYDSLIAALYPDIEKYEEDELAFREEERIRNKQIQASIAQTLRRQSEALSKKRPPSV 180
DDPNYDSLIAALYPDIEKYEEDELAFREEERIRNKQIQASIAQTLRRQSEA+SKKRPPSV
Sbjct: 121 DDPNYDSLIAALYPDIEKYEEDELAFREEERIRNKQIQASIAQTLRRQSEAVSKKRPPSV 180
Query: 181 RRLRGNNYRSNHSRGKRSYRNDAEFLASDDNEDPTAEDGVKDSSSDEQMDRSERRSKGFR 240
RRLRGNNYR++ S+GKRSYRNDAEF ASDDNEDPTAEDGVKDSSSDEQM+RSERRSKGFR
Sbjct: 181 RRLRGNNYRNSQSKGKRSYRNDAEFPASDDNEDPTAEDGVKDSSSDEQMERSERRSKGFR 240
Query: 241 KQGAAKFSQSHFAACSDGAGEDNDSDRVHGETM-GSSRLVSSSKRLVWGKGGMRSHTRHG 300
KQGAAKFSQ FAACSDGAGEDNDSD+V+ E + SSRLV +S+RLVWGKGGMRSHTRHG
Sbjct: 241 KQGAAKFSQPPFAACSDGAGEDNDSDQVNREILSASSRLVGNSERLVWGKGGMRSHTRHG 300
Query: 301 SMTVANNKNVKNNRLSALADYFRNSNNNA-EREVHLLLLSYDQRIIPSLQLPYLCCQQAL 360
M+V ++KNVKNNR+S L D R S+NNA EREV LLL SYDQRIIPSLQLPY+CC+
Sbjct: 301 CMSVGSSKNVKNNRISTLVDSLRTSDNNAEEREVCLLLFSYDQRIIPSLQLPYICCRPTS 360
Query: 361 SVRHLCRYVAHHTGFQADEIDMLLIHELNPKIELPTSIDDLVSKSLIPRSTKDNFQVLSE 420
SVRHLC+YVA TGFQADEIDM LI ELN KIE TSID LVSKSLIP +D+FQVL E
Sbjct: 361 SVRHLCQYVAGQTGFQADEIDMFLIQELNLKIEPSTSIDVLVSKSLIPHPIEDHFQVLRE 420
Query: 421 QQTLAEIKTHCSTRGQL 432
QQTLAE+KTHCSTRGQL
Sbjct: 421 QQTLAELKTHCSTRGQL 431
BLAST of Sed0003135 vs. NCBI nr
Match:
XP_023001718.1 (putative E3 ubiquitin-protein ligase RING1a [Cucurbita maxima])
HSP 1 Score: 617.8 bits (1592), Expect = 7.8e-173
Identity = 346/437 (79.18%), Postives = 374/437 (85.58%), Query Frame = 0
Query: 1 MPAQKRAPESSEDDPLKLGHGFS----KDEDADESDRSASSSSNEEKDEYVFYFATFRVL 60
MPA+KRAPESSEDD LKL HGFS +D DADESDRS SSSSN EKDE++ L
Sbjct: 1 MPAKKRAPESSEDDSLKLDHGFSAARPEDGDADESDRSTSSSSNGEKDEFIVV-----KL 60
Query: 61 FFVFFSIDYYVALNRIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 120
+ + + L IIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR
Sbjct: 61 SDIRKEVQCPICLG-IIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 120
Query: 121 DDPNYDSLIAALYPDIEKYEEDELAFREEERIRNKQIQASIAQTLRRQSEALSKKRPPSV 180
DDPNYDSLIAALYPDIEKYEEDELAFREEERIRNKQIQASIAQTLRRQSEA+SKKRPPSV
Sbjct: 121 DDPNYDSLIAALYPDIEKYEEDELAFREEERIRNKQIQASIAQTLRRQSEAVSKKRPPSV 180
Query: 181 RRLRGNNYRSNHSRGKRSYRNDAEFLASDDNEDPTAEDGVKDSSSDEQMDRSERRSKGFR 240
RRLRGNNYR++ S+GKRSYRNDAEF ASDDNEDPTAEDGVKDSSSDEQM+RSERRSKGFR
Sbjct: 181 RRLRGNNYRNSQSKGKRSYRNDAEFPASDDNEDPTAEDGVKDSSSDEQMERSERRSKGFR 240
Query: 241 KQGAAKFSQSHFAACSDGAGEDNDSDRVHGETM-GSSRLVSSSKRLVWGKGGMRSHTRHG 300
KQGAAKFSQ FAA SDGAGEDNDSD+V+ E + SSRLV +S+RLVWGKGGMRSHTRHG
Sbjct: 241 KQGAAKFSQPPFAAYSDGAGEDNDSDQVNREILSASSRLVGNSERLVWGKGGMRSHTRHG 300
Query: 301 SMTVANNKNVKNNRLSALADYFRNSNNNA-EREVHLLLLSYDQRIIPSLQLPYLCCQQAL 360
M+V ++KNVKNNR+S L D R S+NNA EREV LLL SYDQRIIPSLQLPY+CC+
Sbjct: 301 CMSVGSSKNVKNNRISTLVDSLRTSDNNAEEREVCLLLFSYDQRIIPSLQLPYICCRPTS 360
Query: 361 SVRHLCRYVAHHTGFQADEIDMLLIHELNPKIELPTSIDDLVSKSLIPRSTKDNFQVLSE 420
SVRHLC+YVA TGFQADEIDM LI ELN KIE TSID LVSKSLIP +D+FQVL E
Sbjct: 361 SVRHLCQYVAGQTGFQADEIDMFLIQELNLKIEPSTSIDVLVSKSLIPHPIEDHFQVLRE 420
Query: 421 QQTLAEIKTHCSTRGQL 432
QQTLAE+KTHCSTRGQL
Sbjct: 421 QQTLAELKTHCSTRGQL 431
BLAST of Sed0003135 vs. NCBI nr
Match:
KAG6583983.1 (putative E3 ubiquitin-protein ligase RING1a, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 616.3 bits (1588), Expect = 2.3e-172
Identity = 345/437 (78.95%), Postives = 373/437 (85.35%), Query Frame = 0
Query: 1 MPAQKRAPESSEDDPLKLGHGFS----KDEDADESDRSASSSSNEEKDEYVFYFATFRVL 60
MPA+KRAPESSEDD LKL HG S +D DADESDRS SSSSN EKDE++ L
Sbjct: 1 MPAKKRAPESSEDDSLKLEHGCSAARPEDGDADESDRSTSSSSNGEKDEFIVV-----KL 60
Query: 61 FFVFFSIDYYVALNRIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 120
+ + + L IIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR
Sbjct: 61 SDIRKEVQCPICLG-IIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 120
Query: 121 DDPNYDSLIAALYPDIEKYEEDELAFREEERIRNKQIQASIAQTLRRQSEALSKKRPPSV 180
DDPNYDSLIAALYPDIEKYEEDELAFREEERIRNKQIQASIAQTLRRQSEA+SKKRPPSV
Sbjct: 121 DDPNYDSLIAALYPDIEKYEEDELAFREEERIRNKQIQASIAQTLRRQSEAVSKKRPPSV 180
Query: 181 RRLRGNNYRSNHSRGKRSYRNDAEFLASDDNEDPTAEDGVKDSSSDEQMDRSERRSKGFR 240
RRLRGNNYR++ S+GKRSYRNDAEF ASDDNEDPTAEDGVKDSSSDEQM+RSERRSKGFR
Sbjct: 181 RRLRGNNYRNSQSKGKRSYRNDAEFPASDDNEDPTAEDGVKDSSSDEQMERSERRSKGFR 240
Query: 241 KQGAAKFSQSHFAACSDGAGEDNDSDRVHGETM-GSSRLVSSSKRLVWGKGGMRSHTRHG 300
KQGAAKFSQ FAACSDGAGEDNDSD+V+ E + SS LV +S+RLVWGKGGMRSHTRHG
Sbjct: 241 KQGAAKFSQPPFAACSDGAGEDNDSDQVNREILSASSMLVGNSERLVWGKGGMRSHTRHG 300
Query: 301 SMTVANNKNVKNNRLSALADYFRNSNNNA-EREVHLLLLSYDQRIIPSLQLPYLCCQQAL 360
M+V ++KNVKNNR+S L D R S+NNA EREV LLL SYDQRIIPSLQLPY+CC+
Sbjct: 301 CMSVGSSKNVKNNRISTLVDSLRTSDNNAEEREVCLLLFSYDQRIIPSLQLPYICCRPTS 360
Query: 361 SVRHLCRYVAHHTGFQADEIDMLLIHELNPKIELPTSIDDLVSKSLIPRSTKDNFQVLSE 420
SVRHLC+YVA TGFQADEIDM LI ELN KIE TSID LVSKSLIP +D+FQVL E
Sbjct: 361 SVRHLCQYVAGQTGFQADEIDMFLIQELNLKIEPSTSIDVLVSKSLIPHPIEDHFQVLRE 420
Query: 421 QQTLAEIKTHCSTRGQL 432
QQTLAE+KTHCSTRGQL
Sbjct: 421 QQTLAELKTHCSTRGQL 431
BLAST of Sed0003135 vs. NCBI nr
Match:
XP_022139814.1 (putative E3 ubiquitin-protein ligase RING1a isoform X1 [Momordica charantia])
HSP 1 Score: 607.1 bits (1564), Expect = 1.4e-169
Identity = 342/440 (77.73%), Postives = 375/440 (85.23%), Query Frame = 0
Query: 1 MPAQKRAPESSEDDPLKLGHGFS----KDEDADESDRSASSSSNEEKDEYVFYFATFRVL 60
MPAQKRAPESSEDDPLK HG S +D D+++SDRS SSSSNEEKDE++ L
Sbjct: 1 MPAQKRAPESSEDDPLKRDHGCSSVHPEDGDSEQSDRSPSSSSNEEKDEFIVV-----KL 60
Query: 61 FFVFFSIDYYVALNRIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 120
+ + + L IIRKTRTVMECLHRFCRECIDKSMR+GN ECPACRTHCASRRSLR
Sbjct: 61 SDIRKEVQCPICLG-IIRKTRTVMECLHRFCRECIDKSMRMGNKECPACRTHCASRRSLR 120
Query: 121 DDPNYDSLIAALYPDIEKYEEDELAFREEERIRNKQIQASIAQTLRRQSEALSKKRPPSV 180
DDPNYDSLI+ALYPDIEKYEEDELAFREEER+RNKQIQASIAQTL RQSEA+SKKRPPSV
Sbjct: 121 DDPNYDSLISALYPDIEKYEEDELAFREEERVRNKQIQASIAQTLHRQSEAVSKKRPPSV 180
Query: 181 RRLRG-NNYRSNHSRGKRSYRNDAEFLASDDNEDPTAEDGVKDSSSDEQMDRSERRSKGF 240
RRLRG NN+R+NHSRGKRSYRNDAEF SDD EDPTAEDG KDSSSDEQ +R ERR+KGF
Sbjct: 181 RRLRGNNNHRNNHSRGKRSYRNDAEFPTSDDIEDPTAEDGGKDSSSDEQTERYERRTKGF 240
Query: 241 RKQGAAKFSQSH-FAACSDGAGEDNDSDRVHGETMG--SSRLVSSSKRLVWGKGGMRSHT 300
R QGAAKFSQ AACSDGAGEDNDS+ V+ E G SSR V SS+RLVWGKGGMRSHT
Sbjct: 241 RTQGAAKFSQPPCLAACSDGAGEDNDSE-VNREAPGAASSRHVGSSERLVWGKGGMRSHT 300
Query: 301 RHGSMTVANNKNVKNNRLSALADYFRNSNNNA-EREVHLLLLSYDQRIIPSLQLPYLCCQ 360
RHGS+++ N+KNVKNNRLSALADY RNS++N+ EREVHLLL SYDQRIIPSLQLPY+CC+
Sbjct: 301 RHGSLSIGNSKNVKNNRLSALADYLRNSDDNSEEREVHLLLFSYDQRIIPSLQLPYVCCR 360
Query: 361 QALSVRHLCRYVAHHTGFQADEIDMLLIHELNPKIELPTSIDDLVSKSLIPRSTKDNFQV 420
A SVRHLC+YVAH TGFQADEIDMLLI EL+PKIE TSID LVSKSLIP T+DNFQV
Sbjct: 361 PASSVRHLCQYVAHQTGFQADEIDMLLIQELHPKIEPSTSIDVLVSKSLIPHPTEDNFQV 420
Query: 421 LSEQQTLAEIKTHCSTRGQL 432
L EQQTL E+KTHCSTRGQL
Sbjct: 421 LREQQTLGELKTHCSTRGQL 433
BLAST of Sed0003135 vs. NCBI nr
Match:
KAG7019606.1 (putative E3 ubiquitin-protein ligase RING1a [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 600.9 bits (1548), Expect = 9.8e-168
Identity = 348/482 (72.20%), Postives = 377/482 (78.22%), Query Frame = 0
Query: 1 MPAQKRAPESSEDDPLKLGHGFS----KDEDADESDRSASSSSNEEKDEYVFYFATF--- 60
MPA+KRAPESSEDD LKL HG S +D DADESDRS SSSSN EKDEYV YF TF
Sbjct: 1 MPAKKRAPESSEDDSLKLDHGCSAARPEDGDADESDRSTSSSSNGEKDEYVLYFTTFARS 60
Query: 61 -----------RVL-----------------------FFVFFSIDYYVALN--------- 120
R+L +++ I V L+
Sbjct: 61 HLCFPSSNALGRILRKVGGVGFANFLGTATAAADSPNKYMYCLIFIVVKLSDIRKEVQCP 120
Query: 121 ---RIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDSLIAA 180
IIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDSLIAA
Sbjct: 121 ICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDSLIAA 180
Query: 181 LYPDIEKYEEDELAFREEERIRNKQIQASIAQTLRRQSEALSKKRPPSVRRLRGNNYRSN 240
LYPDIEKYEEDELAFREEERIRNKQIQASIAQTLRRQSEA+SKKRPPSVRRLRGNNYR++
Sbjct: 181 LYPDIEKYEEDELAFREEERIRNKQIQASIAQTLRRQSEAVSKKRPPSVRRLRGNNYRNS 240
Query: 241 HSRGKRSYRNDAEFLASDDNEDPTAEDGVKDSSSDEQMDRSERRSKGFRKQGAAKFSQSH 300
S+GKRSYRNDAEF ASDDNEDPTAEDGVKDSSSDEQM++SERRSKGFRKQGAAKFSQ
Sbjct: 241 QSKGKRSYRNDAEFPASDDNEDPTAEDGVKDSSSDEQMEQSERRSKGFRKQGAAKFSQPP 300
Query: 301 FAACSDGAGEDNDSDRVHGETM-GSSRLVSSSKRLVWGKGGMRSHTRHGSMTVANNKNVK 360
FAACSDGAGEDNDSD+V+ E + SSRLV +S+RLVWGKGGMRSHTRHG M+V ++KNVK
Sbjct: 301 FAACSDGAGEDNDSDQVNREILSASSRLVGNSERLVWGKGGMRSHTRHGCMSVGSSKNVK 360
Query: 361 NNRLSALADYFRNSNNNA-EREVHLLLLSYDQRIIPSLQLPYLCCQQALSVRHLCRYVAH 420
NNR+S L D R S+NNA EREV LLL SYDQRIIPSLQLPY+CC+ SVRHLC+YVA
Sbjct: 361 NNRISTLVDSLRTSDNNAEEREVCLLLFSYDQRIIPSLQLPYICCRPTSSVRHLCQYVAG 420
Query: 421 HTGFQADEIDMLLIHELNPKIELPTSIDDLVSKSLIPRSTKDNFQVLSEQQTLAEIKTHC 428
TGFQADEIDM LI ELN KIE TSID LVSKSLIP +D+FQVL EQQTLAE+KTH
Sbjct: 421 QTGFQADEIDMFLIQELNLKIEPSTSIDVLVSKSLIPHPIEDHFQVLREQQTLAELKTHW 480
BLAST of Sed0003135 vs. ExPASy Swiss-Prot
Match:
Q9FKW0 (Putative E3 ubiquitin-protein ligase RING1a OS=Arabidopsis thaliana OX=3702 GN=RING1A PE=1 SV=2)
HSP 1 Score: 241.1 bits (614), Expect = 2.6e-62
Identity = 175/417 (41.97%), Postives = 253/417 (60.67%), Query Frame = 0
Query: 24 KDEDADESDRSASSSSNEEKDEYVFYFATFRVLFFVFFSIDYYVALNRIIRKTRTVMECL 83
++E+ D +RS SS S ++ + R + + L II+KTRTVMECL
Sbjct: 101 EEEEEDSKERSPSSISGDQSEFMEIDLGEIRK------DVQCPICLG-IIKKTRTVMECL 160
Query: 84 HRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDSLIAALYPDIEKYEEDELAFR 143
HRFCRECIDKSMRLGNNECPACR HCASRRSLRDDP +D+LIAAL+ +I+ YEE+ELAF
Sbjct: 161 HRFCRECIDKSMRLGNNECPACRKHCASRRSLRDDPKFDALIAALFTNIDSYEEEELAFH 220
Query: 144 EEERIRNKQIQASIAQTLRRQSEALSKKRPPSVR--------RLRGNNYRSNHSRGKRSY 203
E+E RNKQIQASIAQ +RQSEAL K+R R+ + R +SR
Sbjct: 221 EDEMARNKQIQASIAQISQRQSEALVKRRSLGKEAAVLMRSPRIASGSRRRRNSRNMEQ- 280
Query: 204 RNDAEFLASDDNEDPTAEDGVKDSSSDEQMDRSERRSKGFRKQGAAKFSQ---SHFAACS 263
+N +E DDN+D KDSSSDE+ +E R K RK+ ++ +Q S A +
Sbjct: 281 QNASEAHEDDDNDDNNNRGRDKDSSSDER--GTEVRQKKRRKRSTSRSTQHPSSSGANKN 340
Query: 264 DGAGEDNDSDRVHGETMG-SSRLVSSSKRLVWGKGGMRSHTRHGSMTV-ANNKNVKNNRL 323
+G DND++ V+ +T G S LV + + L WG+GG RS+TRHG+ T ++K+V+N R+
Sbjct: 341 NGNCADNDTE-VYRDTKGISPGLVWNPEILAWGRGGTRSNTRHGNNTSGGSSKSVRNARV 400
Query: 324 SALADYFRNS--NNNAEREVHLLLLSYDQRIIPSLQLPYLCCQQALSVRHLCRYVAHHTG 383
+ L +Y R+S ++ E ++H+ L+S D + IP L PYLCC+ L V+ L +VA
Sbjct: 401 NKLVEYLRSSVDGSSVELDIHVKLVSLDTKCIPDLPQPYLCCRPTLLVKQLREFVALQIH 460
Query: 384 FQADEIDMLLIHELNPKIELPTSIDDLVSKSLIPRS---TKDNFQVLSEQQTLAEIK 423
+ +E+++L+ ++ +I++L ++ P S +KD L + +TL+ +K
Sbjct: 461 LKTEEVELLVTRR---RVGEDAAIENL--PAVTPASAAASKDEMLSLEDNETLSRLK 501
BLAST of Sed0003135 vs. ExPASy Swiss-Prot
Match:
Q0WX00 (Putative E3 ubiquitin-protein ligase RING1b OS=Arabidopsis thaliana OX=3702 GN=RING1B PE=1 SV=1)
HSP 1 Score: 221.5 bits (563), Expect = 2.1e-56
Identity = 170/426 (39.91%), Postives = 242/426 (56.81%), Query Frame = 0
Query: 12 EDDPLKLGHGFSKDEDA-----DESDRSASSSSNE-EKDEYVFYFATFRVLFFVFFSIDY 71
E+D +K ++DE+A D +RS SSS+ E + EY+ L + +
Sbjct: 49 EEDDVKRDQVEAEDEEALGEEEDSKERSQSSSAGELSESEYMVV-----DLADICKDVQC 108
Query: 72 YVALNRIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDSLI 131
+ L IIRKTRTVMECLHRFCRECIDKSMRLGNNECP CR HCASRRSLRDDPN+D+LI
Sbjct: 109 SICLG-IIRKTRTVMECLHRFCRECIDKSMRLGNNECPTCRKHCASRRSLRDDPNFDALI 168
Query: 132 AALYPDIEKYEEDELAFREEERIRNKQIQASIAQTLRRQSEALSKKRP--PSVRRLRGNN 191
AAL+ +I+K+EE+EL FR+++ RNKQIQASIAQ +RQS+AL K++ L +
Sbjct: 169 AALFKNIDKFEEEELNFRQDDEARNKQIQASIAQVSQRQSKALVKRKSVGKGTAILSRSR 228
Query: 192 YRSNHSRGKRSYRNDAEFLASDDNEDPTAEDGVKDSSSDEQMDRSERRSKGFRKQGAAKF 251
SR +R+ RN E S+ N+D KDSSSDE +R +K+ A +
Sbjct: 229 RSGGGSRRRRNCRN-IEQDTSEANDDDDQNKRGKDSSSDEPCERQR------KKRSATQP 288
Query: 252 SQSHFAACSDGAGEDNDSDRVHGETMGSSRLVSSSKRLVWGKGGMRSHTRHGSMTVANNK 311
S S+ + AG + + S LV +S+ + WG+GG RS+TR G+ NN+
Sbjct: 289 SSSNANNNDNCAGNGTEQTHQRDSRVISPVLVWNSELIAWGRGGTRSNTRQGN----NNQ 348
Query: 312 NV---KNNRLSALADYFRN-SNNNAEREVHLLLLSYDQRIIPSLQLPYLCCQQALSVRHL 371
+N RL L +Y + N+ E ++HL L+S D + +L PYLC + L V+ L
Sbjct: 349 GAISKRNARLKRLVEYLGSLEGNSVELDIHLKLVSLDTEGLLNLHEPYLCFRPTLLVKQL 408
Query: 372 CRYVAHHTGFQADEIDMLLIHELNPKIELPTSIDDLVSKSLIPRSTKDNFQVLSEQQTLA 426
YVA H +A+E+++L+ + + I TS + + Q L + +T+A
Sbjct: 409 REYVARHLKLKAEEVELLVSKDGDTVIGNKTSTEKM--------------QSLQDDETVA 443
BLAST of Sed0003135 vs. ExPASy Swiss-Prot
Match:
Q6MGB6 (E3 ubiquitin-protein ligase RING1 OS=Rattus norvegicus OX=10116 GN=Ring1 PE=2 SV=2)
HSP 1 Score: 77.8 bits (190), Expect = 3.8e-13
Identity = 69/208 (33.17%), Postives = 104/208 (50.00%), Query Frame = 0
Query: 72 IIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDSLIAALYPD 131
+++ T T ECLHRFC +CI ++R GN ECP CR S+RSLR DPN+D+LI+ +YP
Sbjct: 54 MLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPS 113
Query: 132 IEKYE--EDELAFREEERIRNKQIQASIAQTLRRQSEALSKKRPPSVRR-LRGNNYRSNH 191
E+YE +D + R + + +SI + LR Q + R VRR + G++ +
Sbjct: 114 REEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQ----AMHRAQRVRRPMPGSDQTTTM 173
Query: 192 SRGKRSYRNDAEFLASDDNEDPTAEDGVKDSSSDEQMDRSERRSKGFRKQGAAKFSQSHF 251
S G+ + ED DS+ D + +R +G G++ +
Sbjct: 174 SGGE----------GEPGEGEGDGEDISSDSAPDSAPGPAPKRPRGGGAGGSSVGTGGGA 233
Query: 252 A--ACSDGAGEDNDSDRVHGETMGSSRL 275
A AC GAG ++ DR G T+G L
Sbjct: 234 AGGACG-GAGSEDSGDR--GGTLGGGTL 244
BLAST of Sed0003135 vs. ExPASy Swiss-Prot
Match:
O35730 (E3 ubiquitin-protein ligase RING1 OS=Mus musculus OX=10090 GN=Ring1 PE=1 SV=2)
HSP 1 Score: 77.4 bits (189), Expect = 5.0e-13
Identity = 69/208 (33.17%), Postives = 102/208 (49.04%), Query Frame = 0
Query: 72 IIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDSLIAALYPD 131
+++ T T ECLHRFC +CI ++R GN ECP CR S+RSLR DPN+D+LI+ +YP
Sbjct: 54 MLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPS 113
Query: 132 IEKYE--EDELAFREEERIRNKQIQASIAQTLRRQSEALSKKRPPSVRR-LRGNNYRSNH 191
E+YE +D + R + + +SI + LR Q + R VRR + G++ +
Sbjct: 114 REEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQ----AMHRAQRVRRPMPGSDQTATM 173
Query: 192 SRGKRSYRNDAEFLASDDNEDPTAEDGVKDSSSDEQMDRSERRSKGFRKQGAAKFSQSHF 251
S G+ + ED DS+ D + +R +G GA+
Sbjct: 174 SGGE----------GEPGEGEGDGEDVSSDSAPDSAPGPAPKRPRG-AGAGASSVGTGGG 233
Query: 252 AA--CSDGAGEDNDSDRVHGETMGSSRL 275
AA GAG ++ DR G T+G L
Sbjct: 234 AAGGACGGAGSEDSGDR--GGTLGGGTL 244
BLAST of Sed0003135 vs. ExPASy Swiss-Prot
Match:
Q66J69 (E3 ubiquitin-protein ligase RING2-A OS=Xenopus laevis OX=8355 GN=rnf2-a PE=2 SV=1)
HSP 1 Score: 77.4 bits (189), Expect = 5.0e-13
Identity = 53/171 (30.99%), Postives = 87/171 (50.88%), Query Frame = 0
Query: 72 IIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDSLIAALYPD 131
+++ T T ECLHRFC +CI ++R GN ECP CR S+RSLR DPN+D+LI+ +YP
Sbjct: 54 MLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPS 113
Query: 132 IEKYE-EDELAFREEERIRNKQ-IQASIAQTLRRQSEALSKKRPPSVRRLRGNNYRSNHS 191
++YE + + R+ N+Q + +SI + L+ Q+ +R+
Sbjct: 114 RDEYEAHQDRVLAKLNRLHNQQALSSSIEEGLKMQA-----------------MHRAQRV 173
Query: 192 RGKRSYRNDAEFLASDDNEDPTAEDGVKDSSSDEQMDRSERRSKGFRKQGA 241
R + ++ F +DN D + S+++ S +RS+ GA
Sbjct: 174 RKHQHESDNTTFSGGEDNCDSRSHVSNPSVHSNQEAGPSRKRSRASEDSGA 207
BLAST of Sed0003135 vs. ExPASy TrEMBL
Match:
A0A6J1ENS0 (putative E3 ubiquitin-protein ligase RING1a OS=Cucurbita moschata OX=3662 GN=LOC111434221 PE=4 SV=1)
HSP 1 Score: 619.0 bits (1595), Expect = 1.7e-173
Identity = 346/437 (79.18%), Postives = 374/437 (85.58%), Query Frame = 0
Query: 1 MPAQKRAPESSEDDPLKLGHGFS----KDEDADESDRSASSSSNEEKDEYVFYFATFRVL 60
MPA+KRAPESSEDD LKL HG S +D DADESDRS SSSSN EKDE++ L
Sbjct: 1 MPAKKRAPESSEDDSLKLDHGCSAARPEDGDADESDRSTSSSSNGEKDEFIVV-----KL 60
Query: 61 FFVFFSIDYYVALNRIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 120
+ + + L IIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR
Sbjct: 61 SDIRKEVQCPICLG-IIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 120
Query: 121 DDPNYDSLIAALYPDIEKYEEDELAFREEERIRNKQIQASIAQTLRRQSEALSKKRPPSV 180
DDPNYDSLIAALYPDIEKYEEDELAFREEERIRNKQIQASIAQTLRRQSEA+SKKRPPSV
Sbjct: 121 DDPNYDSLIAALYPDIEKYEEDELAFREEERIRNKQIQASIAQTLRRQSEAVSKKRPPSV 180
Query: 181 RRLRGNNYRSNHSRGKRSYRNDAEFLASDDNEDPTAEDGVKDSSSDEQMDRSERRSKGFR 240
RRLRGNNYR++ S+GKRSYRNDAEF ASDDNEDPTAEDGVKDSSSDEQM+RSERRSKGFR
Sbjct: 181 RRLRGNNYRNSQSKGKRSYRNDAEFPASDDNEDPTAEDGVKDSSSDEQMERSERRSKGFR 240
Query: 241 KQGAAKFSQSHFAACSDGAGEDNDSDRVHGETM-GSSRLVSSSKRLVWGKGGMRSHTRHG 300
KQGAAKFSQ FAACSDGAGEDNDSD+V+ E + SSRLV +S+RLVWGKGGMRSHTRHG
Sbjct: 241 KQGAAKFSQPPFAACSDGAGEDNDSDQVNREILSASSRLVGNSERLVWGKGGMRSHTRHG 300
Query: 301 SMTVANNKNVKNNRLSALADYFRNSNNNA-EREVHLLLLSYDQRIIPSLQLPYLCCQQAL 360
M+V ++KNVKNNR+S L D R S+NNA EREV LLL SYDQRIIPSLQLPY+CC+
Sbjct: 301 CMSVGSSKNVKNNRISTLVDSLRTSDNNAEEREVCLLLFSYDQRIIPSLQLPYICCRPTS 360
Query: 361 SVRHLCRYVAHHTGFQADEIDMLLIHELNPKIELPTSIDDLVSKSLIPRSTKDNFQVLSE 420
SVRHLC+YVA TGFQADEIDM LI ELN KIE TSID LVSKSLIP +D+FQVL E
Sbjct: 361 SVRHLCQYVAGQTGFQADEIDMFLIQELNLKIEPSTSIDVLVSKSLIPHPIEDHFQVLRE 420
Query: 421 QQTLAEIKTHCSTRGQL 432
QQTLAE+KTHCSTRGQL
Sbjct: 421 QQTLAELKTHCSTRGQL 431
BLAST of Sed0003135 vs. ExPASy TrEMBL
Match:
A0A6J1KRC5 (putative E3 ubiquitin-protein ligase RING1a OS=Cucurbita maxima OX=3661 GN=LOC111495770 PE=4 SV=1)
HSP 1 Score: 617.8 bits (1592), Expect = 3.8e-173
Identity = 346/437 (79.18%), Postives = 374/437 (85.58%), Query Frame = 0
Query: 1 MPAQKRAPESSEDDPLKLGHGFS----KDEDADESDRSASSSSNEEKDEYVFYFATFRVL 60
MPA+KRAPESSEDD LKL HGFS +D DADESDRS SSSSN EKDE++ L
Sbjct: 1 MPAKKRAPESSEDDSLKLDHGFSAARPEDGDADESDRSTSSSSNGEKDEFIVV-----KL 60
Query: 61 FFVFFSIDYYVALNRIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 120
+ + + L IIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR
Sbjct: 61 SDIRKEVQCPICLG-IIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 120
Query: 121 DDPNYDSLIAALYPDIEKYEEDELAFREEERIRNKQIQASIAQTLRRQSEALSKKRPPSV 180
DDPNYDSLIAALYPDIEKYEEDELAFREEERIRNKQIQASIAQTLRRQSEA+SKKRPPSV
Sbjct: 121 DDPNYDSLIAALYPDIEKYEEDELAFREEERIRNKQIQASIAQTLRRQSEAVSKKRPPSV 180
Query: 181 RRLRGNNYRSNHSRGKRSYRNDAEFLASDDNEDPTAEDGVKDSSSDEQMDRSERRSKGFR 240
RRLRGNNYR++ S+GKRSYRNDAEF ASDDNEDPTAEDGVKDSSSDEQM+RSERRSKGFR
Sbjct: 181 RRLRGNNYRNSQSKGKRSYRNDAEFPASDDNEDPTAEDGVKDSSSDEQMERSERRSKGFR 240
Query: 241 KQGAAKFSQSHFAACSDGAGEDNDSDRVHGETM-GSSRLVSSSKRLVWGKGGMRSHTRHG 300
KQGAAKFSQ FAA SDGAGEDNDSD+V+ E + SSRLV +S+RLVWGKGGMRSHTRHG
Sbjct: 241 KQGAAKFSQPPFAAYSDGAGEDNDSDQVNREILSASSRLVGNSERLVWGKGGMRSHTRHG 300
Query: 301 SMTVANNKNVKNNRLSALADYFRNSNNNA-EREVHLLLLSYDQRIIPSLQLPYLCCQQAL 360
M+V ++KNVKNNR+S L D R S+NNA EREV LLL SYDQRIIPSLQLPY+CC+
Sbjct: 301 CMSVGSSKNVKNNRISTLVDSLRTSDNNAEEREVCLLLFSYDQRIIPSLQLPYICCRPTS 360
Query: 361 SVRHLCRYVAHHTGFQADEIDMLLIHELNPKIELPTSIDDLVSKSLIPRSTKDNFQVLSE 420
SVRHLC+YVA TGFQADEIDM LI ELN KIE TSID LVSKSLIP +D+FQVL E
Sbjct: 361 SVRHLCQYVAGQTGFQADEIDMFLIQELNLKIEPSTSIDVLVSKSLIPHPIEDHFQVLRE 420
Query: 421 QQTLAEIKTHCSTRGQL 432
QQTLAE+KTHCSTRGQL
Sbjct: 421 QQTLAELKTHCSTRGQL 431
BLAST of Sed0003135 vs. ExPASy TrEMBL
Match:
A0A6J1CE12 (putative E3 ubiquitin-protein ligase RING1a isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010638 PE=4 SV=1)
HSP 1 Score: 607.1 bits (1564), Expect = 6.6e-170
Identity = 342/440 (77.73%), Postives = 375/440 (85.23%), Query Frame = 0
Query: 1 MPAQKRAPESSEDDPLKLGHGFS----KDEDADESDRSASSSSNEEKDEYVFYFATFRVL 60
MPAQKRAPESSEDDPLK HG S +D D+++SDRS SSSSNEEKDE++ L
Sbjct: 1 MPAQKRAPESSEDDPLKRDHGCSSVHPEDGDSEQSDRSPSSSSNEEKDEFIVV-----KL 60
Query: 61 FFVFFSIDYYVALNRIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 120
+ + + L IIRKTRTVMECLHRFCRECIDKSMR+GN ECPACRTHCASRRSLR
Sbjct: 61 SDIRKEVQCPICLG-IIRKTRTVMECLHRFCRECIDKSMRMGNKECPACRTHCASRRSLR 120
Query: 121 DDPNYDSLIAALYPDIEKYEEDELAFREEERIRNKQIQASIAQTLRRQSEALSKKRPPSV 180
DDPNYDSLI+ALYPDIEKYEEDELAFREEER+RNKQIQASIAQTL RQSEA+SKKRPPSV
Sbjct: 121 DDPNYDSLISALYPDIEKYEEDELAFREEERVRNKQIQASIAQTLHRQSEAVSKKRPPSV 180
Query: 181 RRLRG-NNYRSNHSRGKRSYRNDAEFLASDDNEDPTAEDGVKDSSSDEQMDRSERRSKGF 240
RRLRG NN+R+NHSRGKRSYRNDAEF SDD EDPTAEDG KDSSSDEQ +R ERR+KGF
Sbjct: 181 RRLRGNNNHRNNHSRGKRSYRNDAEFPTSDDIEDPTAEDGGKDSSSDEQTERYERRTKGF 240
Query: 241 RKQGAAKFSQSH-FAACSDGAGEDNDSDRVHGETMG--SSRLVSSSKRLVWGKGGMRSHT 300
R QGAAKFSQ AACSDGAGEDNDS+ V+ E G SSR V SS+RLVWGKGGMRSHT
Sbjct: 241 RTQGAAKFSQPPCLAACSDGAGEDNDSE-VNREAPGAASSRHVGSSERLVWGKGGMRSHT 300
Query: 301 RHGSMTVANNKNVKNNRLSALADYFRNSNNNA-EREVHLLLLSYDQRIIPSLQLPYLCCQ 360
RHGS+++ N+KNVKNNRLSALADY RNS++N+ EREVHLLL SYDQRIIPSLQLPY+CC+
Sbjct: 301 RHGSLSIGNSKNVKNNRLSALADYLRNSDDNSEEREVHLLLFSYDQRIIPSLQLPYVCCR 360
Query: 361 QALSVRHLCRYVAHHTGFQADEIDMLLIHELNPKIELPTSIDDLVSKSLIPRSTKDNFQV 420
A SVRHLC+YVAH TGFQADEIDMLLI EL+PKIE TSID LVSKSLIP T+DNFQV
Sbjct: 361 PASSVRHLCQYVAHQTGFQADEIDMLLIQELHPKIEPSTSIDVLVSKSLIPHPTEDNFQV 420
Query: 421 LSEQQTLAEIKTHCSTRGQL 432
L EQQTL E+KTHCSTRGQL
Sbjct: 421 LREQQTLGELKTHCSTRGQL 433
BLAST of Sed0003135 vs. ExPASy TrEMBL
Match:
A0A6J1CDU7 (putative E3 ubiquitin-protein ligase RING1a isoform X3 OS=Momordica charantia OX=3673 GN=LOC111010638 PE=4 SV=1)
HSP 1 Score: 548.9 bits (1413), Expect = 2.1e-152
Identity = 296/357 (82.91%), Postives = 320/357 (89.64%), Query Frame = 0
Query: 80 MECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDSLIAALYPDIEKYEEDE 139
MECLHRFCRECIDKSMR+GN ECPACRTHCASRRSLRDDPNYDSLI+ALYPDIEKYEEDE
Sbjct: 1 MECLHRFCRECIDKSMRMGNKECPACRTHCASRRSLRDDPNYDSLISALYPDIEKYEEDE 60
Query: 140 LAFREEERIRNKQIQASIAQTLRRQSEALSKKRPPSVRRLRG-NNYRSNHSRGKRSYRND 199
LAFREEER+RNKQIQASIAQTL RQSEA+SKKRPPSVRRLRG NN+R+NHSRGKRSYRND
Sbjct: 61 LAFREEERVRNKQIQASIAQTLHRQSEAVSKKRPPSVRRLRGNNNHRNNHSRGKRSYRND 120
Query: 200 AEFLASDDNEDPTAEDGVKDSSSDEQMDRSERRSKGFRKQGAAKFSQSH-FAACSDGAGE 259
AEF SDD EDPTAEDG KDSSSDEQ +R ERR+KGFR QGAAKFSQ AACSDGAGE
Sbjct: 121 AEFPTSDDIEDPTAEDGGKDSSSDEQTERYERRTKGFRTQGAAKFSQPPCLAACSDGAGE 180
Query: 260 DNDSDRVHGETMG--SSRLVSSSKRLVWGKGGMRSHTRHGSMTVANNKNVKNNRLSALAD 319
DNDS+ V+ E G SSR V SS+RLVWGKGGMRSHTRHGS+++ N+KNVKNNRLSALAD
Sbjct: 181 DNDSE-VNREAPGAASSRHVGSSERLVWGKGGMRSHTRHGSLSIGNSKNVKNNRLSALAD 240
Query: 320 YFRNSNNNA-EREVHLLLLSYDQRIIPSLQLPYLCCQQALSVRHLCRYVAHHTGFQADEI 379
Y RNS++N+ EREVHLLL SYDQRIIPSLQLPY+CC+ A SVRHLC+YVAH TGFQADEI
Sbjct: 241 YLRNSDDNSEEREVHLLLFSYDQRIIPSLQLPYVCCRPASSVRHLCQYVAHQTGFQADEI 300
Query: 380 DMLLIHELNPKIELPTSIDDLVSKSLIPRSTKDNFQVLSEQQTLAEIKTHCSTRGQL 432
DMLLI EL+PKIE TSID LVSKSLIP T+DNFQVL EQQTL E+KTHCSTRGQL
Sbjct: 301 DMLLIQELHPKIEPSTSIDVLVSKSLIPHPTEDNFQVLREQQTLGELKTHCSTRGQL 356
BLAST of Sed0003135 vs. ExPASy TrEMBL
Match:
A0A6J1CDC8 (putative E3 ubiquitin-protein ligase RING1a isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010638 PE=4 SV=1)
HSP 1 Score: 497.3 bits (1279), Expect = 7.4e-137
Identity = 284/370 (76.76%), Postives = 314/370 (84.86%), Query Frame = 0
Query: 1 MPAQKRAPESSEDDPLKLGHGFS----KDEDADESDRSASSSSNEEKDEYVFYFATFRVL 60
MPAQKRAPESSEDDPLK HG S +D D+++SDRS SSSSNEEKDE++ L
Sbjct: 1 MPAQKRAPESSEDDPLKRDHGCSSVHPEDGDSEQSDRSPSSSSNEEKDEFIVV-----KL 60
Query: 61 FFVFFSIDYYVALNRIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 120
+ + + L IIRKTRTVMECLHRFCRECIDKSMR+GN ECPACRTHCASRRSLR
Sbjct: 61 SDIRKEVQCPICLG-IIRKTRTVMECLHRFCRECIDKSMRMGNKECPACRTHCASRRSLR 120
Query: 121 DDPNYDSLIAALYPDIEKYEEDELAFREEERIRNKQIQASIAQTLRRQSEALSKKRPPSV 180
DDPNYDSLI+ALYPDIEKYEEDELAFREEER+RNKQIQASIAQTL RQSEA+SKKRPPSV
Sbjct: 121 DDPNYDSLISALYPDIEKYEEDELAFREEERVRNKQIQASIAQTLHRQSEAVSKKRPPSV 180
Query: 181 RRLRG-NNYRSNHSRGKRSYRNDAEFLASDDNEDPTAEDGVKDSSSDEQMDRSERRSKGF 240
RRLRG NN+R+NHSRGKRSYRNDAEF SDD EDPTAEDG KDSSSDEQ +R ERR+KGF
Sbjct: 181 RRLRGNNNHRNNHSRGKRSYRNDAEFPTSDDIEDPTAEDGGKDSSSDEQTERYERRTKGF 240
Query: 241 RKQGAAKFSQSH-FAACSDGAGEDNDSDRVHGETMG--SSRLVSSSKRLVWGKGGMRSHT 300
R QGAAKFSQ AACSDGAGEDNDS+ V+ E G SSR V SS+RLVWGKGGMRSHT
Sbjct: 241 RTQGAAKFSQPPCLAACSDGAGEDNDSE-VNREAPGAASSRHVGSSERLVWGKGGMRSHT 300
Query: 301 RHGSMTVANNKNVKNNRLSALADYFRNSNNNA-EREVHLLLLSYDQRIIPSLQLPYLCCQ 360
RHGS+++ N+KNVKNNRLSALADY RNS++N+ EREVHLLL SYDQRIIPSLQLPY+CC+
Sbjct: 301 RHGSLSIGNSKNVKNNRLSALADYLRNSDDNSEEREVHLLLFSYDQRIIPSLQLPYVCCR 360
Query: 361 QALSVRHLCR 362
A SVRHLC+
Sbjct: 361 PASSVRHLCQ 363
BLAST of Sed0003135 vs. TAIR 10
Match:
AT5G44280.1 (RING 1A )
HSP 1 Score: 241.1 bits (614), Expect = 1.8e-63
Identity = 175/417 (41.97%), Postives = 253/417 (60.67%), Query Frame = 0
Query: 24 KDEDADESDRSASSSSNEEKDEYVFYFATFRVLFFVFFSIDYYVALNRIIRKTRTVMECL 83
++E+ D +RS SS S ++ + R + + L II+KTRTVMECL
Sbjct: 101 EEEEEDSKERSPSSISGDQSEFMEIDLGEIRK------DVQCPICLG-IIKKTRTVMECL 160
Query: 84 HRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDSLIAALYPDIEKYEEDELAFR 143
HRFCRECIDKSMRLGNNECPACR HCASRRSLRDDP +D+LIAAL+ +I+ YEE+ELAF
Sbjct: 161 HRFCRECIDKSMRLGNNECPACRKHCASRRSLRDDPKFDALIAALFTNIDSYEEEELAFH 220
Query: 144 EEERIRNKQIQASIAQTLRRQSEALSKKRPPSVR--------RLRGNNYRSNHSRGKRSY 203
E+E RNKQIQASIAQ +RQSEAL K+R R+ + R +SR
Sbjct: 221 EDEMARNKQIQASIAQISQRQSEALVKRRSLGKEAAVLMRSPRIASGSRRRRNSRNMEQ- 280
Query: 204 RNDAEFLASDDNEDPTAEDGVKDSSSDEQMDRSERRSKGFRKQGAAKFSQ---SHFAACS 263
+N +E DDN+D KDSSSDE+ +E R K RK+ ++ +Q S A +
Sbjct: 281 QNASEAHEDDDNDDNNNRGRDKDSSSDER--GTEVRQKKRRKRSTSRSTQHPSSSGANKN 340
Query: 264 DGAGEDNDSDRVHGETMG-SSRLVSSSKRLVWGKGGMRSHTRHGSMTV-ANNKNVKNNRL 323
+G DND++ V+ +T G S LV + + L WG+GG RS+TRHG+ T ++K+V+N R+
Sbjct: 341 NGNCADNDTE-VYRDTKGISPGLVWNPEILAWGRGGTRSNTRHGNNTSGGSSKSVRNARV 400
Query: 324 SALADYFRNS--NNNAEREVHLLLLSYDQRIIPSLQLPYLCCQQALSVRHLCRYVAHHTG 383
+ L +Y R+S ++ E ++H+ L+S D + IP L PYLCC+ L V+ L +VA
Sbjct: 401 NKLVEYLRSSVDGSSVELDIHVKLVSLDTKCIPDLPQPYLCCRPTLLVKQLREFVALQIH 460
Query: 384 FQADEIDMLLIHELNPKIELPTSIDDLVSKSLIPRS---TKDNFQVLSEQQTLAEIK 423
+ +E+++L+ ++ +I++L ++ P S +KD L + +TL+ +K
Sbjct: 461 LKTEEVELLVTRR---RVGEDAAIENL--PAVTPASAAASKDEMLSLEDNETLSRLK 501
BLAST of Sed0003135 vs. TAIR 10
Match:
AT1G03770.1 (RING 1B )
HSP 1 Score: 221.5 bits (563), Expect = 1.5e-57
Identity = 170/426 (39.91%), Postives = 242/426 (56.81%), Query Frame = 0
Query: 12 EDDPLKLGHGFSKDEDA-----DESDRSASSSSNE-EKDEYVFYFATFRVLFFVFFSIDY 71
E+D +K ++DE+A D +RS SSS+ E + EY+ L + +
Sbjct: 49 EEDDVKRDQVEAEDEEALGEEEDSKERSQSSSAGELSESEYMVV-----DLADICKDVQC 108
Query: 72 YVALNRIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDSLI 131
+ L IIRKTRTVMECLHRFCRECIDKSMRLGNNECP CR HCASRRSLRDDPN+D+LI
Sbjct: 109 SICLG-IIRKTRTVMECLHRFCRECIDKSMRLGNNECPTCRKHCASRRSLRDDPNFDALI 168
Query: 132 AALYPDIEKYEEDELAFREEERIRNKQIQASIAQTLRRQSEALSKKRP--PSVRRLRGNN 191
AAL+ +I+K+EE+EL FR+++ RNKQIQASIAQ +RQS+AL K++ L +
Sbjct: 169 AALFKNIDKFEEEELNFRQDDEARNKQIQASIAQVSQRQSKALVKRKSVGKGTAILSRSR 228
Query: 192 YRSNHSRGKRSYRNDAEFLASDDNEDPTAEDGVKDSSSDEQMDRSERRSKGFRKQGAAKF 251
SR +R+ RN E S+ N+D KDSSSDE +R +K+ A +
Sbjct: 229 RSGGGSRRRRNCRN-IEQDTSEANDDDDQNKRGKDSSSDEPCERQR------KKRSATQP 288
Query: 252 SQSHFAACSDGAGEDNDSDRVHGETMGSSRLVSSSKRLVWGKGGMRSHTRHGSMTVANNK 311
S S+ + AG + + S LV +S+ + WG+GG RS+TR G+ NN+
Sbjct: 289 SSSNANNNDNCAGNGTEQTHQRDSRVISPVLVWNSELIAWGRGGTRSNTRQGN----NNQ 348
Query: 312 NV---KNNRLSALADYFRN-SNNNAEREVHLLLLSYDQRIIPSLQLPYLCCQQALSVRHL 371
+N RL L +Y + N+ E ++HL L+S D + +L PYLC + L V+ L
Sbjct: 349 GAISKRNARLKRLVEYLGSLEGNSVELDIHLKLVSLDTEGLLNLHEPYLCFRPTLLVKQL 408
Query: 372 CRYVAHHTGFQADEIDMLLIHELNPKIELPTSIDDLVSKSLIPRSTKDNFQVLSEQQTLA 426
YVA H +A+E+++L+ + + I TS + + Q L + +T+A
Sbjct: 409 REYVARHLKLKAEEVELLVSKDGDTVIGNKTSTEKM--------------QSLQDDETVA 443
BLAST of Sed0003135 vs. TAIR 10
Match:
AT1G03770.3 (RING 1B )
HSP 1 Score: 214.9 bits (546), Expect = 1.4e-55
Identity = 170/432 (39.35%), Postives = 242/432 (56.02%), Query Frame = 0
Query: 12 EDDPLKLGHGFSKDEDA-----DESDRSASSSSNE-EKDEYVFYFATFRVLFFVFFSIDY 71
E+D +K ++DE+A D +RS SSS+ E + EY+ L + +
Sbjct: 49 EEDDVKRDQVEAEDEEALGEEEDSKERSQSSSAGELSESEYMVV-----DLADICKDVQC 108
Query: 72 YVALNRIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDSLI 131
+ L IIRKTRTVMECLHRFCRECIDKSMRLGNNECP CR HCASRRSLRDDPN+D+LI
Sbjct: 109 SICLG-IIRKTRTVMECLHRFCRECIDKSMRLGNNECPTCRKHCASRRSLRDDPNFDALI 168
Query: 132 AALYPDIEKYEEDELAFREEERIRNKQIQASIAQTLRRQSEALSKKRP--PSVRRLRGNN 191
AAL+ +I+K+EE+EL FR+++ RNKQIQASIAQ +RQS+AL K++ L +
Sbjct: 169 AALFKNIDKFEEEELNFRQDDEARNKQIQASIAQVSQRQSKALVKRKSVGKGTAILSRSR 228
Query: 192 YRSNHSRGKRSYRNDAEFLASDDNEDPTAEDGVKDSSSDEQMDRSERRSKGFRKQGAAKF 251
SR +R+ RN E S+ N+D KDSSSDE +R +K+ A +
Sbjct: 229 RSGGGSRRRRNCRN-IEQDTSEANDDDDQNKRGKDSSSDEPCERQR------KKRSATQP 288
Query: 252 SQSHFAACSDGAGEDNDSDRVHGETMGSSRLVSSSKRLVWGKGGMRSHTRHGSMTVANNK 311
S S+ + AG + + S LV +S+ + WG+GG RS+TR G+ NN+
Sbjct: 289 SSSNANNNDNCAGNGTEQTHQRDSRVISPVLVWNSELIAWGRGGTRSNTRQGN----NNQ 348
Query: 312 NV---KNNRLSALADYFRN-SNNNAEREVHLLLLSYDQRIIPSLQLPYLCCQQALSVRHL 371
+N RL L +Y + N+ E ++HL L+S D + +L PYLC + L V+ L
Sbjct: 349 GAISKRNARLKRLVEYLGSLEGNSVELDIHLKLVSLDTEGLLNLHEPYLCFRPTLLVKQL 408
Query: 372 CR------YVAHHTGFQADEIDMLLIHELNPKIELPTSIDDLVSKSLIPRSTKDNFQVLS 426
YVA H +A+E+++L+ + + I TS + + Q L
Sbjct: 409 REVSSLPLYVARHLKLKAEEVELLVSKDGDTVIGNKTSTEKM--------------QSLQ 449
BLAST of Sed0003135 vs. TAIR 10
Match:
AT1G03770.2 (RING 1B )
HSP 1 Score: 214.2 bits (544), Expect = 2.4e-55
Identity = 170/434 (39.17%), Postives = 242/434 (55.76%), Query Frame = 0
Query: 12 EDDPLKLGHGFSKDEDA-------DESDRSASSSSNE-EKDEYVFYFATFRVLFFVFFSI 71
E+D +K ++DE+A D +RS SSS+ E + EY+ L + +
Sbjct: 49 EEDDVKRDQVEAEDEEALGEEEVSDSKERSQSSSAGELSESEYMVV-----DLADICKDV 108
Query: 72 DYYVALNRIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDS 131
+ L IIRKTRTVMECLHRFCRECIDKSMRLGNNECP CR HCASRRSLRDDPN+D+
Sbjct: 109 QCSICLG-IIRKTRTVMECLHRFCRECIDKSMRLGNNECPTCRKHCASRRSLRDDPNFDA 168
Query: 132 LIAALYPDIEKYEEDELAFREEERIRNKQIQASIAQTLRRQSEALSKKRP--PSVRRLRG 191
LIAAL+ +I+K+EE+EL FR+++ RNKQIQASIAQ +RQS+AL K++ L
Sbjct: 169 LIAALFKNIDKFEEEELNFRQDDEARNKQIQASIAQVSQRQSKALVKRKSVGKGTAILSR 228
Query: 192 NNYRSNHSRGKRSYRNDAEFLASDDNEDPTAEDGVKDSSSDEQMDRSERRSKGFRKQGAA 251
+ SR +R+ RN E S+ N+D KDSSSDE +R +K+ A
Sbjct: 229 SRRSGGGSRRRRNCRN-IEQDTSEANDDDDQNKRGKDSSSDEPCERQR------KKRSAT 288
Query: 252 KFSQSHFAACSDGAGEDNDSDRVHGETMGSSRLVSSSKRLVWGKGGMRSHTRHGSMTVAN 311
+ S S+ + AG + + S LV +S+ + WG+GG RS+TR G+ N
Sbjct: 289 QPSSSNANNNDNCAGNGTEQTHQRDSRVISPVLVWNSELIAWGRGGTRSNTRQGN----N 348
Query: 312 NKNV---KNNRLSALADYFRN-SNNNAEREVHLLLLSYDQRIIPSLQLPYLCCQQALSVR 371
N+ +N RL L +Y + N+ E ++HL L+S D + +L PYLC + L V+
Sbjct: 349 NQGAISKRNARLKRLVEYLGSLEGNSVELDIHLKLVSLDTEGLLNLHEPYLCFRPTLLVK 408
Query: 372 HLCR------YVAHHTGFQADEIDMLLIHELNPKIELPTSIDDLVSKSLIPRSTKDNFQV 426
L YVA H +A+E+++L+ + + I TS + + Q
Sbjct: 409 QLREVSSLPLYVARHLKLKAEEVELLVSKDGDTVIGNKTSTEKM--------------QS 451
BLAST of Sed0003135 vs. TAIR 10
Match:
AT5G44280.2 (RING 1A )
HSP 1 Score: 180.6 bits (457), Expect = 3.0e-45
Identity = 154/427 (36.07%), Postives = 235/427 (55.04%), Query Frame = 0
Query: 24 KDEDADESDRSASSSSNEEKDEYVFYFATFRV----------LFFVFFSIDYYVALNRII 83
++E+ D +RS SS S ++ + R + F+ I YY
Sbjct: 101 EEEEEDSKERSPSSISGDQSEFMEIDLGEIRKDVQCPICLVGMKFLRLFISYY------- 160
Query: 84 RKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDSLIAALYPDIE 143
++ + +FC NNECPACR HCASRRSLRDDP +D+LIAAL+ +I+
Sbjct: 161 KENKDCDGMSPQFC-------ATFKNNECPACRKHCASRRSLRDDPKFDALIAALFTNID 220
Query: 144 KYEEDELAFREEERIRNKQIQASIAQTLRRQSEALSKKRPPSVR--------RLRGNNYR 203
YEE+ELAF E+E RNKQIQASIAQ +RQSEAL K+R R+ + R
Sbjct: 221 SYEEEELAFHEDEMARNKQIQASIAQISQRQSEALVKRRSLGKEAAVLMRSPRIASGSRR 280
Query: 204 SNHSRGKRSYRNDAEFLASDDNEDPTAEDGVKDSSSDEQMDRSERRSKGFRKQGAAKFSQ 263
+SR +N +E DDN+D KDSSSDE+ +E R K RK+ ++ +Q
Sbjct: 281 RRNSRNMEQ-QNASEAHEDDDNDDNNNRGRDKDSSSDER--GTEVRQKKRRKRSTSRSTQ 340
Query: 264 ---SHFAACSDGAGEDNDSDRVHGETMG-SSRLVSSSKRLVWGKGGMRSHTRHGSMTV-A 323
S A ++G DND++ V+ +T G S LV + + L WG+GG RS+TRHG+ T
Sbjct: 341 HPSSSGANKNNGNCADNDTE-VYRDTKGISPGLVWNPEILAWGRGGTRSNTRHGNNTSGG 400
Query: 324 NNKNVKNNRLSALADYFRNS--NNNAEREVHLLLLSYDQRIIPSLQLPYLCCQQALSVRH 383
++K+V+N R++ L +Y R+S ++ E ++H+ L+S D + IP L PYLCC+ L V+
Sbjct: 401 SSKSVRNARVNKLVEYLRSSVDGSSVELDIHVKLVSLDTKCIPDLPQPYLCCRPTLLVKQ 460
Query: 384 LCRYVAHHTGFQADEIDMLLIHELNPKIELPTSIDDLVSKSLIPRS---TKDNFQVLSEQ 423
L +VA + +E+++L+ ++ +I++L ++ P S +KD L +
Sbjct: 461 LREFVALQIHLKTEEVELLVTRR---RVGEDAAIENL--PAVTPASAAASKDEMLSLEDN 504
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022927385.1 | 3.5e-173 | 79.18 | putative E3 ubiquitin-protein ligase RING1a [Cucurbita moschata] >XP_023519096.1... | [more] |
XP_023001718.1 | 7.8e-173 | 79.18 | putative E3 ubiquitin-protein ligase RING1a [Cucurbita maxima] | [more] |
KAG6583983.1 | 2.3e-172 | 78.95 | putative E3 ubiquitin-protein ligase RING1a, partial [Cucurbita argyrosperma sub... | [more] |
XP_022139814.1 | 1.4e-169 | 77.73 | putative E3 ubiquitin-protein ligase RING1a isoform X1 [Momordica charantia] | [more] |
KAG7019606.1 | 9.8e-168 | 72.20 | putative E3 ubiquitin-protein ligase RING1a [Cucurbita argyrosperma subsp. argyr... | [more] |
Match Name | E-value | Identity | Description | |
Q9FKW0 | 2.6e-62 | 41.97 | Putative E3 ubiquitin-protein ligase RING1a OS=Arabidopsis thaliana OX=3702 GN=R... | [more] |
Q0WX00 | 2.1e-56 | 39.91 | Putative E3 ubiquitin-protein ligase RING1b OS=Arabidopsis thaliana OX=3702 GN=R... | [more] |
Q6MGB6 | 3.8e-13 | 33.17 | E3 ubiquitin-protein ligase RING1 OS=Rattus norvegicus OX=10116 GN=Ring1 PE=2 SV... | [more] |
O35730 | 5.0e-13 | 33.17 | E3 ubiquitin-protein ligase RING1 OS=Mus musculus OX=10090 GN=Ring1 PE=1 SV=2 | [more] |
Q66J69 | 5.0e-13 | 30.99 | E3 ubiquitin-protein ligase RING2-A OS=Xenopus laevis OX=8355 GN=rnf2-a PE=2 SV=... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1ENS0 | 1.7e-173 | 79.18 | putative E3 ubiquitin-protein ligase RING1a OS=Cucurbita moschata OX=3662 GN=LOC... | [more] |
A0A6J1KRC5 | 3.8e-173 | 79.18 | putative E3 ubiquitin-protein ligase RING1a OS=Cucurbita maxima OX=3661 GN=LOC11... | [more] |
A0A6J1CE12 | 6.6e-170 | 77.73 | putative E3 ubiquitin-protein ligase RING1a isoform X1 OS=Momordica charantia OX... | [more] |
A0A6J1CDU7 | 2.1e-152 | 82.91 | putative E3 ubiquitin-protein ligase RING1a isoform X3 OS=Momordica charantia OX... | [more] |
A0A6J1CDC8 | 7.4e-137 | 76.76 | putative E3 ubiquitin-protein ligase RING1a isoform X2 OS=Momordica charantia OX... | [more] |