Sed0003073 (gene) Chayote v1

Overview


Name	Sed0003073
Type	gene
Organism	Sechium edule (Chayote v1)
Description	26S proteasome regulatory subunit RPN13 isoform X1
Location	LG11: 7114891 .. 7125939 (-)
RNA-Seq Expression	Sed0003073
Synteny	Sed0003073

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAGGAGCCTACATGGGTGGTCTCCAATTGAGATCAATTAGACCTAACAAATAAGTACTAAATGACTTTGTCACTGAATCCCAAAGAGAAACATTGAATCTTAGATTCTTTTGTTTTTCTTTCTCCTGAGCCTACACAATGTAGTGCACACTCCTAATTGCCACATAAACTTTCCTTGCTCTCAGAAAAGAAGACTCGATAATTAAATCCCTTCACCCTTTCTTCCCGTGGCCATGGAAAGTCCAAACTTCTCTAGAAGTCTATTCAAAACCAAGTAAGTTGTCTCACATTGTCAAAGAATGTGGTCTAGATCATCTGCATGATTGCATCCCTTTTACGCGTAATACAACACCAAGGCCCCACCATGGTGGGCACCTTTCTCGTCACATTATTGAGAGTGTTCAACCTCCGCTTAAAGCCTGTCGTTCGTCATATAAAGAACTTCAAAATTTTTTTTCTTTCAAACTATTTCTTGGCAAGGACTGCTCATGGACTATCGTTGATCGTTATTATCATAAATGTTTATTTTGTAGCAAAGATGAAGAATGGACATCTCCTATAATATGTAATTTCTATATTGCTGACTTTTTTGGATGCACATAACAGTCATAATGCTGCATTAATTTGTGTCTCAATATGTATTCCATGCAGTATCATGTCATATCATTAGTGATGGTTCTTTTTCTTGAAGTTGGGATTTTTGGTGATATGGCTTTGGTTGCTTTCTGTGGCTCTAGTTGTTTGCAATTACTCTTCCTTGTTCACATCTTTTTTTTCCCTACTTAGATTGGGACATTTTTCATCCTTGTTCACATCAGAACCTATGATCTAGAAATGATGATCACTTCTTAGTTCTTATGTTTTGAAGCGGCCTTTGAGTTGAGAACCAATTTGGAGAAATATGCAGTTTGTTAAATAAATAATAATTATGATTGGGTCAAAGAGGCTGCTCAAGCAAAGGTTGAGCTGCTTCCTATTTTTGAATGAATATTTAACGTTCTTTGGTGGGTGATTAAGGGAGTAAGATTTTGGAAATTATTTGGGGATGCTTAAGAAGACCTACAATCAAAGAAGTTCTATTGATTCGAAGGGTTATGTTAAATCTTAAACCATGTTGTGCATCCAGCCTACCCATTTGTATGATGTTTAGTTTTTCTGTAAGGGCCATTCTTAATTTTGAGAGGAAAATGAAACAAGACTTTTTTTCTATGGAAAGGAAATGCAGGTGGAAAATTGATTCATGAGGTGAATTAGGAATCTTTTTTTTGCAGTTAAAATTGATGGTTTGGGTGTAGGCATTCTTCAGGTGGGAAGTGAAAGCTTTACTTACTAAATGACTTTGGAGACTTTCAAGGAAAGAAAATGAATTGTGGGACTAAATTATCCTAAGAACAAAGAAGGGACATGTTGAAATTTCTTTCAAAGTTTCGCGTGTGATGGAACTAGAGGAATGATGATCGAGGAGCTGGAAAACGGGGAGGGGGCGGTAGCAAAAGTGGAGCAACCATGGAGAAGGAGCTGGAGGCAATGGCGCATAGAATGATTGGGGCTAGATTAGGGCTTAGGGAAAGGGGAGCAAAGAGAACGTTGTTGAAAGATGCAATTATCGTTACAACTTACAACTTTTCCCAATGCTCTTTAAATTAACGTGGCTAGAGTAACTTTATATATTCACTTACAATTAGAAGTGTCTCTTTTAAAAAGAAGCAGACGTAAGAAAGGAAGGAAAAAAGAAAATTGCTCACATCAGAGCTTATGATTAATAACTTTTTTTCTTGGAAAAATAATACAATGGTTTTGGCTATTGTCTGTTAGAAGTATACATATTTACAATGGTTTTGGCTATTGGCTATTGTCTCTTTGTGGTAGGAAATACTTTTGGAATTTCGTGCTGGAAAAATGTGTTTTGAAGGAAAACGGGTTGTACCTGATACACGTAAAGGACTTGTTCGTATTGGAAGGGTAAGTTTGAACATTTACATGTTTACATAATTCTATCTCTTTGTTATGTGTTAATTGTGTAATTACTTTCTTTTTAAGAGACTGTATGCTTAGTTGGAGTCGAACTGTTTATTTTTTTTATTGGAAGGGTAATTTTTTTGAGTCCTAATTAGTGCATAGAGAATCTTCCCCATGTGATCATGAAAGTTTAGATAGTGATTCTGAGGTAAGTTTGAGTAGTGAGGAATTTGATCTTCCTGCTTATATCTTGAATGAAGTCTTTAGCTAAATTGTGGTTCTCTTTTTAAGTATTTTGCCGGGTTTTCTTTGCAAAACCTTTGTTTCAATTGACATGCTTTTATAGGCAACTCCTTTCCTTTGTAGTCATTTATTGAGTTCTTTTATGTCTGTTTTTATGTTTGTTCTTATCTCACTCCTCTTTAGAAGACTTCCTTTTGGGGGACTTGTTATTTTTATGCTCTTGTATGCTTTCATTTTTTTCTAAAGTTGGTTTCTTATTTAAAAAAATAATAACAACAAATCGAAACCCATCCCACAACCTCTTCATTTCACCTTTGCTTTATCCATATATTCTCTCTAAAAATCCGCTCTCTAAAAAATTCACCCAAGAAGACTCTAGCCACTTTTTTTGTTCTCTCCTCTTCCTCGACGCTAAGGACTAGGAAAGGTTGCTCTTGTATTGCGGTTAGGTTACTCTCCTCCCCCTTTGGCATCGTTCTCCTCCATTTCCCTCTTCGCTATTTTCCCTCACCCTCGTATCTCTTTGTTTCTCTCTTGCTACCATCCCTCTTTGGCTACCGCCTTTCTCTAGTTGTCGCCTCTTCTCACCGAACAATGCCTCTCTACTTTTCGTCTTCTTCTCTTGCCCACTCGACGCCTCTTTTCTCTCCTCTTGTCGTCTCCTCAAACCTCCTCAGCTGCCTATCATCCTTGTGCACCACGTTTTCTCCATCTTATGGTACGATATCCACCGGTGTCAAGTCTTATTGGTCCTCCTTTTTCCTTCGGTACAACATCCACATATTTTGTGCGCCACATTTCTTTCTATCTTCTTCGATCACATTTGAGATCATTGACTTTGGTTCTCCGTCGGGCATTTCATTGGTGGGTATGCCACTCTTCTCTGGAAATCCTGGGCAACGACTTTCAACTCTCACAAGCTTTCTGTTGACACCCACCATTTTCTAGGTCAATATTTGATGGCAACAAAATCACTTTTCTTCATCAGCATTATTTCTCTGGCTAACATTGGGGCTTTATCCTTCCTCCCAGCCATCTTTCGGGGACATCGACGTTAGTATCAAGTTCAAATTTGAGGACAATATCTAAAGGAATATTTCATCGACACTCAAGCTTCCACCGATACCCACCATTGTGTTTCTTTCTCTTTATTGAGATTTTTTGTTTCCTTGGTGTATGAGCTTGTTTTAATCGGTGTATTTCCTTTTTTTTTCCTCTGCCTGGCCAATGTGATTGGCCTTTTCTCTCCCCAATCTTTTTCTTTCTTATTTCTTCTCTCATGTTTCAATAGATTCTTTATAACTTTTTCACTAATCAATGAAATCATTTTGTTGCCTTTAAAAAAACAATTATCTTCAATGGAAAATAAAGAAGATTGTTAATTAATATTGATCTTACAAGGGTGAACCTCTCTAAATTCCAAACCACTCACCTTGATTATTAGCAATTACCACTATTTGATGGCTGAATTTTTCTTATTCTGTTTTTTTTAAAATTTATTTATTTTTATTTTTAAAATATTTTTGATTTTTCCTTCCGTTTGTTTGTCCTTTGTTTTTTGAGATGGTCTTCCCCCTAAAGGGAAAAGAAAGGGGTAGAGACGGTTTCTGAATTTTTCCTCAGCTGTTTTTAACAATTATTTTTCCAACTATTAGGATTGGCCTAGTGCTTAAGAGAGCCTTGAGTAACTAAGAGGTTATGAGTTTAAATCCAGGATGTTTTCCTATTTAGAAATTAATTTTCTAGTGGTTTTCCTGACAGCCAATTGTTGTAAGTAAGGGTGTAAATGGTTCGGTTCGGCTCGGTTTAAGGGCCAAATCGGAATCGAACCGTTAATTTTTTTTAAAGAATTCGTAAACCGAACCGAACTGCCAAAGATATATAATCGAACCGGCCCGAACCGCTAAACCGGCAGTTCGGTCTATCGGTTTAGAGATGAAAACCCACGCCCGTATTTAATCAAAATAAATTGCCGAGTCTACAGCTCGAACTCGTGCACAATCCAAATTTATGAAAGCATTTGACCAACTCTACCACTACTGTTTATTGTTTAGATAACAGATAAGATTATTTATATAATATAACTACGAATATCCAATTTAATAAAGAATAAAAGTGCGTTTGGTATGCCTCGAGCTCTTGCACTCATAAAATCAAAGAGGGACACACGCCAGTTGTGCTACCATAAACCTATGTTTATAATTTTCCATTTTTAAAAGATATACTCGGTCGGTTCGGTTAAACCGACACCAAATCCTCTAAAACCGAACCCGACCGAATATATTCGGTTTTTAATATTTCTAAATCGAAATCTTCCAAAATATTTGGTTTCGGCTTAAACTGGTGTCGGTTTCGGTCGGTGTGGGCGGTTTTTCGGTTTTACCTTGCACCCCTAGTTGTAAGGCCAGACAATTGTCTTGTCAGTGCACGTAAGCTAGTTCAGACACTCATAGATATAAAAAAGTCCCCAAGGGGTGGTAGAGTGGTTGAAGACTTGGGCTTTCAGGGTATGCTCCCCTCAAGGTTCCAGGTTCGAGACTTAGCTGTGACATTACTCCTTCGATGTCTCCTCGTGTCTGGCCTAGGGACGGGTTTGGTTACCCTTGTTTCAAAAAAAAAACTCATAGATATAAAAAAATAAATCAATTATTTTCCCTTGTTCTGTAAGAGTCAATCCGTTAGAGATATGCTTTCTAGTTGAACATAATCCTTCATCAGATAAAAACTAATTTCTCTCTTTGAACTTGTGGTTATCTTTTCTATGTCAGGGCGAGGAGGGATTGTTGCACTTTCAATGGCTTGATCGGACACAAAATGTCATCGAAGATGTATCCTGATCACTAGTGTGTCAATTTCCAATTCGTGGTGTTTGGTTAATCCATATACCTCTCACAGATCCTCTATAGACTATTTCTGCTGATTATTTCCATTGATTATTGAACTAAGAATGTATGGATTTCGTCCTAATATTTGATTCACTTGAATTTTAAGGCTTACCCCCACTAGAAAAAAGAGCAAAAGATAAACGTCAATTTGAAAAGATTTGTACTTCAAAGTATACAGATAATAGTGGTAGAGTAAATATGTATTATGTAAGTCCAACATCTCTACCTTTGAAGCCCTAATAAATAATAATTTTTTTCTTGCCCATGTTAAATTATACTTCATGATGAAATATTTTGATTTTTGTACATCATAGTTGAAATACGGCATAACGACAATGATCTTACCGGGTCCGTTATTAAAAACAAACTCTTGTTAGTGGAACTGTGGAAGTAGATAGTCGACACTTTCTGCAAGCAGTGAAAAGGATTTTTAGTTTTTGTTTGTGTTTTGCATGGGGTGGTCGACACATTCTGTTGTACAGATGGCTTGTGTTTAACGTTGACAGCATAGCCTTTCTTTATTAGTATATTCCGGGAAGTTGATGGGCCGATTACAGTGTATTCTTCTTTCCAAATGCAAGGCTACTGCAAAGTAATAAGAGCATATTATTATACTGTTAAATTGGACTTTTCTCTATTCGTCAGCTATGATTTTTGTGCTCTTAGTCTTACCATTTTGCTTGCTAGTTGTTTCTTGTTTTCCTTAATACAAGGTATCAAAGGATCAGATTGTTTTTCCTGATGAAGCAGTTTTTGAGAAGGTGTGTAACTCTCTCTCTCTCTCTATTAAAAGAATTACTTTTAGTGAAGAAATATAAATAACTATATAAAGAGGGAGCTAAGAGTTTGGTCCCGTCTAAAGAGGCTAAGGAATAGTCTCCAATCAAGCAATATCTGCAAATGAATGATGCACAGAGAAATTAGAGAATCTTTCAAGGGGAGAAGGGTTTGACAAGGCGTTTCGCTTCCTGTTCCTGTTAGGGTGTTCTTTTCATAACGACCCATTTTTTATGATTGCCAACTAGAGCTTTTTTTATTAAAATTCATTGCCTTTGGTAAGGGTAACTTCTCTCTGTAATTTTATTATTTGAATGGACAAGATGTTTCTTCCACACCCACACCCTCCATCAAAAAAAAATAAAAATAAAAAATAATATAATTATAATAAATAAAAAAAAATCTTTTACGTTTTCTTTCATGGTTAAATTTGTTGTTTTTGTCTGCTTCAGGTTAATCAGGCGTCAGGAAGAGTTTACTTATTGAAGTTTATAACAGATGACAGGAAGTTCTTCTTTTGGATGCAGGTCAGATCTATGATTACTTTTTATTCTTTGAGAGGGTTGATTTATATTCTACTCTTTTCACAATTCTGACCAACTTTAGATGAACTGTAACCAGGAGCCCAAGGCTGAAGATGACCAGCAATTGTGTATCTCCGTTAATGAATACATTAATCGGCCACTGGGTACTTCTTAATTTTTGTATTTGTTCGACTATCTTCTGAATGAGGTTTATAGAGTTACTTTCTAACCAATTGTGCTGGGTCAAGTGTAGGCTTGTATTTGTGGTTTTCTGTGCATTCGAGCATACATTCACACAACTCATTCTCATATTACTGAAATATTTTGCCACTAGATTTTATGTTTCTAAATTGTCTTATAATATGAACCAAAAAAAACCTGCAAAACGGAAAAAGGAACCACATCAATATATTGTGGAAAGTGTCTTTCACTTACTGACGTCCTCATTGCATATGGAGTCAAATAATAATGCCGGCACGGCAGCTCTGAAATATGGCTTAATAGCTTCTTTGGAATGAAATTCATTCATGATGGAAATTTGGTGGCTTGTTGTGCTGGATTTAATGATTGCTCACGGAGGAGCTTCTTTATAATTTGTTGGCTCACCTCACCCCATCACCTTTATTTTTGCTCATGTTGCTCAGAATTTCTTGAGGAAGAACAACCCGTTGCTTCAACTCCTCTACAAGTTTCAGAAGGTACAGTCGAAGAAAATATCCCATCAAGGTATATCTAAGATCGTCTCTTTTTTGGTTTTATTTAGTTTTCTGAACCCTTTTGAGCCTTCAAATGGGTTTTCATTGGGTGGTACTAGCCCTAGCTGCACTTTCAAGTATAGCAGCTGGACATTTTTTTTTTAACATCCGTGAGTGTTTGGGTAAGCTTACTTACACCTCGAGTATTCTCACGGAACATACTGTTTGACCTTACAATATTTGGACATACTACCATGGATTGAACTTATCACCTCTTAAGTGTTTATGACACTCTTGACCACAAGGGTCACTTACACGATATAGAGATGTTTTATGTAATGACCCTTTTAAGTCGTTGAATGGGTTTAGTGGTACTAGCCCTGCTGCACCAACAAGTCATTCTAAAGTATGCTGAGTGTTGTTACGAATTCGGTTATTTCTTTCCAGCCACCACTTCCTCCCGCTCCCCCCCCCAAAAAAAAAGCAAAAACCATGTTCAGCCATAAAGTCTCATTTCCTCCTTTGAAAGGATGATCATTCAAAATGCATCAAAGAAAGGAGGAAATGTCTTGTAAAATTCCTTCCAAATTGAACAAACAAAAAATCCCAAAATTTGGTTGCTCAGCAGCAAAGATATGAAAAGAGATCAATGGTCAAAGATACAAATTTCACTAGAGAGTGAAAATAAAACCATAAAACGAAAGCAATAGAGAGAAAAAATCTTAGCAAGAAATATAAGTGTTCAAATTAAGAAGAATATCCTGAAAGTGAAAAAAGAAACCATCAAAAGCCTTTGAGAAGAGAACACCGAGGAGAAGCCTTCAGACGGGCTGAACAAAAAAGATCAGAAAAAATATGTTTATTTTTGAAGATCCTTTGATTGAGTTCCAATCGTAACTCTGATAAATAACTATGATGGCAATAATACCATAGGCATTTTCCTTCTGGAGTTACTGAAGAAACAATAAGCAGTGGAAGAACGTTAGCTTTGAATCTGTTGGAGATTACCCTTTGGAGGTTGAAATATGAGAAAAGCTTGAACTAGTAGCCTGGCATAGGGGCTGTAAAATAATATGATTAAAAGAATCCCCCATCCGAATAACACAGAACATAAAATTATAAGTTGGAAAAAATTGAACCATATTTGTAATCCTTGAGAGCAAAGGGCTAAAGTGATTAGAATTTCGTGGAAATTTCTCTTCAGTCTACTTCGTTGGAATATTTTCCCCTGCTGTTTCTTTGTTTTCATTAGCTAAAATTTTTGACAATCTATTTTCTTTTCATGACATTGAAGCTCCTCAATACAACCAGTGAAGTTGGAAGACCTTCAAAGAATTTTAAGTAACATCGAGTCTTCTGGTACGAGAGTCTCCTCAAACATGTTCTCATTCTCTTTTGTTTCTTTTGATCTCTCCAAACTATAGTAATTTTGTGCTTGTTTTGAACTTGCAGATATTGATATTGATCCAGATGCAGGTAATAAGTTACATTTTAAATTTCCTTGACTTGTAATCATGTATACGTAGTAAAAGCATTTATCTGGAAGAATCCCTTGCCTGGCAGATTTGTTTTTATTATTTTATATTATTATTTTAGATATTCGACCATTTTTTTTTGTCTGATTTAGATAAGAGAACTGTCATTAATAAATAAAAATTTCAAGATATCAAAGCTTAAATTAATTGAGAATTTTATCCAAGGGTATAAATCATATAATGGTCAGAAGTGACTCTAAACTACAAAAGTGACTCATCACAAATGAGCCAATCTAAGATTTGTGGTCATCTCAACCTCTCCTAAAGGATGAAGGTTTGAAATTTGAATACCTAATACTTGAGGGGTAAAAAAGAAAACCCAATGTAGCTGCCACAACGCTATGGGCCAATTTGTATTATTATCCATTCACACACGTTCTTCTTTCCCACTAAATTTCTTGAGTGCATCTAATAATGGCATTCGAACCTTTTTTTTGGGATAAGAAACAACTTTATTGATAAATGAAACATTGGAGAAAGCTCCTACACCTGGTGATTACATGAAACATCTCCGATTAGAGATGAAAAAGTATAAACTAATAAGTAGCATTCAACCTTTACAAGAAATCTTAGCTTTACTTTCGAAAGTTGACATAAGTTAGTTCATTCTACTTTTCTTGTCTTCTCCCTTGCCCTACAAATTTACTGTTTTATGTTGACACTTCCTTGATGATGTAGGTTTTGGATTAGGAGATTTATTGAAGCCTGATCTGATAATGCCATTGCTGGAAACGTTGCCATTGGAACAGAATTTAGCATCGTATTTACCTGAGGTATACACAGATTTGGTATTTGATCCCTTATGATAACTTTACTTATTGTTCGATTATGTTCTTGATTGCAGGGTCCATGGTCTCCTGAGGATGTATTGGAACTGTTACAAAGCCCGCCTTTCCGTCAACAAGTAGAATCATTTACTTACGTAATAATCTAAACTTCTAGGCCCCGTTTGATAACCATTTCATGTTTTTACTTTTTTAAAAACATGTTTGTTTGATAACCAATTTTGGTTTTTGTTTTTAAAATTTTTAAAACGTTTTTAAAATGTTAATGAAATTCTAAAATTAAAAAAAAAGTAGTTTTTAAAAATAAGTTTTCATTTTCGTTTTTAAATAAGTAGGAAAAAATTAAGAATAAATAGTAAAAAACAAAAAACATCAAAACAAAATGTGGTTTGAAAACAAAAAACAGTTATTAAACATGTTTACTGTTTTTTGGTTTTTAATTTTTAAAAACATAAAACTAAAATCAGTTATCAAACGCTTGCAGTTTTTATTTTTTAAAACAAAAAATCAAAAATTAAAAATAAAAAATAAAAAACAAAATAGTTTTTTAGGGCTCCCTAGCTTTTGGTTTCTACTCTTGGCGCTTTCATTTTCTAATCTTCTCTTACTTTTGTTGTCGATGTATTTCTAGGTTCTTCGGACTGGACAGATAGATTTGTCTCAGTTTGGGATAGACCCGAGCAAATGTAAGTAGATTGTTCTGCAAAGGCCTAATGGTTTTTCAATAAATATCATGCTGCTAGTTGGGATGTGTAGGTGTCCTCAAGGTCCACGTGTTTCTTCTTGGTTGGTTTTAGTGATAGTCATCTCCAGGAGGGTGTGTTAAGGTTGAAAACCCAATAACTTTATGATAGAAATACTTTAGGGTATATTGGTAATTGGTTAGAGAGGTTTGTTGAATTATGTTAAATCATCAATCAACCTAGATCATGTTTTTTGGCCAATTTAATTATATCAACTAGCACTCTCACTTGTAGACTTAAAAATTTTGAGAATATGCATAAAATGGAAATCAATATTAATGGGGATGATACAACTTGCCAAAAATTTGAAAATCACTGACTAATTTAAAAACTTAAACTTCAAAAACTTAAATTTATGGGTTGAGGTGAATTTTATTTAATTATATCAATAAAAAAACACTAGGTATTTGGTAATAAATAGAGTGACAAAAATGTATTTGGCGAATTTCTGAGTGGTTTTGGGCTTATGTGAGAGGGCCTAAGGAGGGTCTAAATATCTGAATTACTTGGTTTACATTTACATTGCAATACATTTTGTACATTTTGGGTCCGTGACTTTAAGTGAAGCCTCTATTAGAAGGGTGGGGCTTATGAACGTAATACAAGTAGGATTTCGACATTCATTTGATAAAAAATGCTTCGGTTTCCTGCAGACAAATTTACGGTATTGTCTTTTCTCGAAGCCCTCGAGGATTCCGTTTCGAAAATGTCAAATTCTGAGGTGGGGCAAGATGATAAGGATGTAAGATCCCAATCCTGTAACGATGCCATGGATGAATCATAGAGAAAGATATTCAAATACTGTGTTTGCTTTATCAGTTACCAATCTGATTTTGATTGTTATTGGCAAAGAGAAGTTTATTTGGACAGTTTCTGTTTTCCCTTGTATGCACACTAG

mRNA sequence

ATGGAGAAGGAGCCTACATGGGTGGAAATACTTTTGGAATTTCGTGCTGGAAAAATGTGTTTTGAAGGAAAACGGGTTGTACCTGATACACGTAAAGGACTTGTTCGTATTGGAAGGGGCGAGGAGGGATTGTTGCACTTTCAATGGCTTGATCGGACACAAAATGTCATCGAAGATGATCAGATTGTTTTTCCTGATGAAGCAGTTTTTGAGAAGGTTAATCAGGCGTCAGGAAGAGTTTACTTATTGAAGTTTATAACAGATGACAGGAAGTTCTTCTTTTGGATGCAGGAGCCCAAGGCTGAAGATGACCAGCAATTGTGTATCTCCGTTAATGAATACATTAATCGGCCACTGGAATTTCTTGAGGAAGAACAACCCGTTGCTTCAACTCCTCTACAAGTTTCAGAAGGTACAGTCGAAGAAAATATCCCATCAAGCTCCTCAATACAACCAGTGAAGTTGGAAGACCTTCAAAGAATTTTAAGTAACATCGAGTCTTCTGATATTGATATTGATCCAGATGCAGGTTTTGGATTAGGAGATTTATTGAAGCCTGATCTGATAATGCCATTGCTGGAAACGTTGCCATTGGAACAGAATTTAGCATCGTATTTACCTGAGGGTCCATGGTCTCCTGAGGATGTATTGGAACTGTTACAAAGCCCGCCTTTCCGTCAACAAGTAGAATCATTTACTTACGTTCTTCGGACTGGACAGATAGATTTGTCTCAGTTTGGGATAGACCCGAGCAAATACAAATTTACGGTATTGTCTTTTCTCGAAGCCCTCGAGGATTCCGTTTCGAAAATGTCAAATTCTGAGGTGGGGCAAGATGATAAGGATAGAAAGATATTCAAATACTGTGTTTGCTTTATCAGTTACCAATCTGATTTTGATTGTTATTGGCAAAGAGAAGTTTATTTGGACAGTTTCTGTTTTCCCTTGTATGCACACTAG

Coding sequence (CDS)

ATGGAGAAGGAGCCTACATGGGTGGAAATACTTTTGGAATTTCGTGCTGGAAAAATGTGTTTTGAAGGAAAACGGGTTGTACCTGATACACGTAAAGGACTTGTTCGTATTGGAAGGGGCGAGGAGGGATTGTTGCACTTTCAATGGCTTGATCGGACACAAAATGTCATCGAAGATGATCAGATTGTTTTTCCTGATGAAGCAGTTTTTGAGAAGGTTAATCAGGCGTCAGGAAGAGTTTACTTATTGAAGTTTATAACAGATGACAGGAAGTTCTTCTTTTGGATGCAGGAGCCCAAGGCTGAAGATGACCAGCAATTGTGTATCTCCGTTAATGAATACATTAATCGGCCACTGGAATTTCTTGAGGAAGAACAACCCGTTGCTTCAACTCCTCTACAAGTTTCAGAAGGTACAGTCGAAGAAAATATCCCATCAAGCTCCTCAATACAACCAGTGAAGTTGGAAGACCTTCAAAGAATTTTAAGTAACATCGAGTCTTCTGATATTGATATTGATCCAGATGCAGGTTTTGGATTAGGAGATTTATTGAAGCCTGATCTGATAATGCCATTGCTGGAAACGTTGCCATTGGAACAGAATTTAGCATCGTATTTACCTGAGGGTCCATGGTCTCCTGAGGATGTATTGGAACTGTTACAAAGCCCGCCTTTCCGTCAACAAGTAGAATCATTTACTTACGTTCTTCGGACTGGACAGATAGATTTGTCTCAGTTTGGGATAGACCCGAGCAAATACAAATTTACGGTATTGTCTTTTCTCGAAGCCCTCGAGGATTCCGTTTCGAAAATGTCAAATTCTGAGGTGGGGCAAGATGATAAGGATAGAAAGATATTCAAATACTGTGTTTGCTTTATCAGTTACCAATCTGATTTTGATTGTTATTGGCAAAGAGAAGTTTATTTGGACAGTTTCTGTTTTCCCTTGTATGCACACTAG

Protein sequence

MEKEPTWVEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDEAVFEKVNQASGRVYLLKFITDDRKFFFWMQEPKAEDDQQLCISVNEYINRPLEFLEEEQPVASTPLQVSEGTVEENIPSSSSIQPVKLEDLQRILSNIESSDIDIDPDAGFGLGDLLKPDLIMPLLETLPLEQNLASYLPEGPWSPEDVLELLQSPPFRQQVESFTYVLRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVSKMSNSEVGQDDKDRKIFKYCVCFISYQSDFDCYWQREVYLDSFCFPLYAH

Homology

[Close]

BLAST of Sed0003073 vs. NCBI nr
Match: XP_022966078.1 (26S proteasome regulatory subunit RPN13 isoform X2 [Cucurbita maxima])

HSP 1 Score: 533.5 bits (1373), Expect = 1.3e-147
Identity = 264/281 (93.95%), Postives = 273/281 (97.15%), Query Frame = 0


Query: 2   EKEPTWVEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQ 61
           E  P   EILLEFRAGKMCFEGKRV+PDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQ
Sbjct: 7   EAVPVMQEILLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQ 66

Query: 62  IVFPDEAVFEKVNQASGRVYLLKFITDDRKFFFWMQEPKAEDDQQLCISVNEYINRPLEF 121
           IVFPDEAVFEKVNQASGRVYLLKF TDDRKFFFWMQEPKAEDDQQLCISVN+YINRPLEF
Sbjct: 67  IVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYINRPLEF 126

Query: 122 LEEEQPVASTPLQVSEGTVEENIPSSSSIQPVKLEDLQRILSNIESSDIDIDPDAGFGLG 181
           LEEEQ VASTPLQVSEGTVEENIPSSSS++PVKLEDLQRILSNIESSDID+DPDAGFGLG
Sbjct: 127 LEEEQSVASTPLQVSEGTVEENIPSSSSLRPVKLEDLQRILSNIESSDIDVDPDAGFGLG 186

Query: 182 DLLKPDLIMPLLETLPLEQNLASYLPEGPWSPEDVLELLQSPPFRQQVESFTYVLRTGQI 241
           DLLKPDLIMPLLETLPLEQ+LASYLPEGPWSPED+LELLQSPPFRQQV+SFTYVLRTGQI
Sbjct: 187 DLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVDSFTYVLRTGQI 246

Query: 242 DLSQFGIDPSKYKFTVLSFLEALEDSVSKMSNSEVGQDDKD 283
           DLSQFGIDPSKYKFTVLSFLEALEDSVSKMSNSE GQD+KD
Sbjct: 247 DLSQFGIDPSKYKFTVLSFLEALEDSVSKMSNSEAGQDEKD 287

[Close]

BLAST of Sed0003073 vs. NCBI nr
Match: XP_022937753.1 (26S proteasome regulatory subunit RPN13 isoform X2 [Cucurbita moschata] >XP_023538270.1 26S proteasome regulatory subunit RPN13 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 531.6 bits (1368), Expect = 4.8e-147
Identity = 263/281 (93.59%), Postives = 273/281 (97.15%), Query Frame = 0


Query: 2   EKEPTWVEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQ 61
           E  P   EILLEFRAGKMCFEGKRV+PDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQ
Sbjct: 7   EAVPVMQEILLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQ 66

Query: 62  IVFPDEAVFEKVNQASGRVYLLKFITDDRKFFFWMQEPKAEDDQQLCISVNEYINRPLEF 121
           IVFPDEAVFEKVNQASGRVYLLKF TDDRKFFFWMQEPKAEDDQQLCISVN+YINRPLEF
Sbjct: 67  IVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYINRPLEF 126

Query: 122 LEEEQPVASTPLQVSEGTVEENIPSSSSIQPVKLEDLQRILSNIESSDIDIDPDAGFGLG 181
           LEEEQ VASTPLQVSEGTVEENIPSSSS++PVKLEDLQRILSNIESSDID+DPDAGFGLG
Sbjct: 127 LEEEQSVASTPLQVSEGTVEENIPSSSSLRPVKLEDLQRILSNIESSDIDVDPDAGFGLG 186

Query: 182 DLLKPDLIMPLLETLPLEQNLASYLPEGPWSPEDVLELLQSPPFRQQVESFTYVLRTGQI 241
           DLLKPDLIMPLLETLPLEQ+LASYLPEGPWSPED+LELLQSPPFRQQV+SFTYVLRTGQI
Sbjct: 187 DLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVDSFTYVLRTGQI 246

Query: 242 DLSQFGIDPSKYKFTVLSFLEALEDSVSKMSNSEVGQDDKD 283
           DLSQFGIDPSKYKFTVLSFLEALEDSVSKMS+SE GQD+KD
Sbjct: 247 DLSQFGIDPSKYKFTVLSFLEALEDSVSKMSSSEAGQDEKD 287

[Close]

BLAST of Sed0003073 vs. NCBI nr
Match: KAG6586125.1 (26S proteasome regulatory subunit RPN13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 531.2 bits (1367), Expect = 6.2e-147
Identity = 262/281 (93.24%), Postives = 273/281 (97.15%), Query Frame = 0


Query: 2   EKEPTWVEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQ 61
           E  P   EILLEFRAGKMCFEGKRV+PDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQ
Sbjct: 74  EAVPVMQEILLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQ 133

Query: 62  IVFPDEAVFEKVNQASGRVYLLKFITDDRKFFFWMQEPKAEDDQQLCISVNEYINRPLEF 121
           IVFPDEAVFEKVNQASGRVYLLKF TDDRKFFFWMQEPKAEDDQQLCIS+N+YINRPLEF
Sbjct: 134 IVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISINDYINRPLEF 193

Query: 122 LEEEQPVASTPLQVSEGTVEENIPSSSSIQPVKLEDLQRILSNIESSDIDIDPDAGFGLG 181
           LEEEQ VASTPLQVSEGTVEENIPSSSS++PVKLEDLQRILSNIESSDID+DPDAGFGLG
Sbjct: 194 LEEEQSVASTPLQVSEGTVEENIPSSSSLRPVKLEDLQRILSNIESSDIDVDPDAGFGLG 253

Query: 182 DLLKPDLIMPLLETLPLEQNLASYLPEGPWSPEDVLELLQSPPFRQQVESFTYVLRTGQI 241
           DLLKPDLIMPLLETLPLEQ+LASYLPEGPWSPED+LELLQSPPFRQQV+SFTYVLRTGQI
Sbjct: 254 DLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVDSFTYVLRTGQI 313

Query: 242 DLSQFGIDPSKYKFTVLSFLEALEDSVSKMSNSEVGQDDKD 283
           DLSQFGIDPSKYKFTVLSFLEALEDSVSKMS+SE GQD+KD
Sbjct: 314 DLSQFGIDPSKYKFTVLSFLEALEDSVSKMSSSEAGQDEKD 354

[Close]

BLAST of Sed0003073 vs. NCBI nr
Match: XP_022966077.1 (26S proteasome regulatory subunit RPN13 isoform X1 [Cucurbita maxima])

HSP 1 Score: 528.9 bits (1361), Expect = 3.1e-146
Identity = 264/282 (93.62%), Postives = 273/282 (96.81%), Query Frame = 0


Query: 2   EKEPTWVEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQ 61
           E  P   EILLEFRAGKMCFEGKRV+PDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQ
Sbjct: 7   EAVPVMQEILLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQ 66

Query: 62  IVFPDEAVFEKVNQASGRVYLLKFITDDRKFFFWMQEPKAEDDQQLCISVNEYINRPLEF 121
           IVFPDEAVFEKVNQASGRVYLLKF TDDRKFFFWMQEPKAEDDQQLCISVN+YINRPLEF
Sbjct: 67  IVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYINRPLEF 126

Query: 122 LEEEQPVASTPLQVSEGTVEENIPSSSSIQPVKLEDLQRILSNIESS-DIDIDPDAGFGL 181
           LEEEQ VASTPLQVSEGTVEENIPSSSS++PVKLEDLQRILSNIESS DID+DPDAGFGL
Sbjct: 127 LEEEQSVASTPLQVSEGTVEENIPSSSSLRPVKLEDLQRILSNIESSADIDVDPDAGFGL 186

Query: 182 GDLLKPDLIMPLLETLPLEQNLASYLPEGPWSPEDVLELLQSPPFRQQVESFTYVLRTGQ 241
           GDLLKPDLIMPLLETLPLEQ+LASYLPEGPWSPED+LELLQSPPFRQQV+SFTYVLRTGQ
Sbjct: 187 GDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVDSFTYVLRTGQ 246

Query: 242 IDLSQFGIDPSKYKFTVLSFLEALEDSVSKMSNSEVGQDDKD 283
           IDLSQFGIDPSKYKFTVLSFLEALEDSVSKMSNSE GQD+KD
Sbjct: 247 IDLSQFGIDPSKYKFTVLSFLEALEDSVSKMSNSEAGQDEKD 288

[Close]

BLAST of Sed0003073 vs. NCBI nr
Match: XP_022937752.1 (26S proteasome regulatory subunit RPN13 isoform X1 [Cucurbita moschata] >XP_023538269.1 26S proteasome regulatory subunit RPN13 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 526.9 bits (1356), Expect = 1.2e-145
Identity = 263/282 (93.26%), Postives = 273/282 (96.81%), Query Frame = 0


Query: 2   EKEPTWVEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQ 61
           E  P   EILLEFRAGKMCFEGKRV+PDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQ
Sbjct: 7   EAVPVMQEILLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQ 66

Query: 62  IVFPDEAVFEKVNQASGRVYLLKFITDDRKFFFWMQEPKAEDDQQLCISVNEYINRPLEF 121
           IVFPDEAVFEKVNQASGRVYLLKF TDDRKFFFWMQEPKAEDDQQLCISVN+YINRPLEF
Sbjct: 67  IVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYINRPLEF 126

Query: 122 LEEEQPVASTPLQVSEGTVEENIPSSSSIQPVKLEDLQRILSNIESS-DIDIDPDAGFGL 181
           LEEEQ VASTPLQVSEGTVEENIPSSSS++PVKLEDLQRILSNIESS DID+DPDAGFGL
Sbjct: 127 LEEEQSVASTPLQVSEGTVEENIPSSSSLRPVKLEDLQRILSNIESSADIDVDPDAGFGL 186

Query: 182 GDLLKPDLIMPLLETLPLEQNLASYLPEGPWSPEDVLELLQSPPFRQQVESFTYVLRTGQ 241
           GDLLKPDLIMPLLETLPLEQ+LASYLPEGPWSPED+LELLQSPPFRQQV+SFTYVLRTGQ
Sbjct: 187 GDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVDSFTYVLRTGQ 246

Query: 242 IDLSQFGIDPSKYKFTVLSFLEALEDSVSKMSNSEVGQDDKD 283
           IDLSQFGIDPSKYKFTVLSFLEALEDSVSKMS+SE GQD+KD
Sbjct: 247 IDLSQFGIDPSKYKFTVLSFLEALEDSVSKMSSSEAGQDEKD 288

[Close]

BLAST of Sed0003073 vs. ExPASy Swiss-Prot
Match: O48726 (26S proteasome regulatory subunit RPN13 OS=Arabidopsis thaliana OX=3702 GN=RPN13 PE=1 SV=2)

HSP 1 Score: 356.7 bits (914), Expect = 2.8e-97
Identity = 185/296 (62.50%), Postives = 220/296 (74.32%), Query Frame = 0


Query: 2   EKEPTWVEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQ 61
           E  P   EI+LEFRAGKM  +G RVVPD RKGLVRI RG+EGL+HFQWLDR QN +EDDQ
Sbjct: 5   EAFPVMQEIMLEFRAGKMSLQGTRVVPDARKGLVRIARGDEGLIHFQWLDRNQNTVEDDQ 64

Query: 62  IVFPDEAVFEKVNQASGRVYLLKFITDDRKFFFWMQEPKAEDDQQLCISVNEYINRPLEF 121
           IVFPDEA+FEKVNQ+S RVY+LKF +DDRK FFWMQEP+AE D +LC SVN+Y+N+PLEF
Sbjct: 65  IVFPDEALFEKVNQSSDRVYILKFNSDDRKLFFWMQEPRAEGDAELCSSVNQYLNQPLEF 124

Query: 122 LEEEQPVASTPLQVSEGTVEENIPS-----------------SSSIQPVKLEDLQRILSN 181
             EE  +A+   +  E   E+N  S                 +SS  PVKL DLQRIL+N
Sbjct: 125 PGEE-GLAAAITEELEDMAEDNTSSRAGNLVVPNLSSEVSDVTSSSGPVKLADLQRILNN 184

Query: 182 IESSDIDI--DPDAGFGLGDLLKPDLIMPLLETLPLEQNLASYLPEGPWSPEDVLELLQS 241
           +    + I  D D G  LGD+LKP+LIMPLLE LP+++ L+S+LPEG    ED+LELLQS
Sbjct: 185 LSGGPVGIAGDQDEGLALGDILKPELIMPLLEALPVQERLSSHLPEGHSRAEDILELLQS 244

Query: 242 PPFRQQVESFTYVLRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVSKMSNSEVGQ 279
           PPFRQQV++FTYVLRTGQIDL+QFGIDPSKYKFTV SFLEALEDSVS  S   + +
Sbjct: 245 PPFRQQVDAFTYVLRTGQIDLTQFGIDPSKYKFTVDSFLEALEDSVSTQSRDAMDE 299

[Close]

BLAST of Sed0003073 vs. ExPASy Swiss-Prot
Match: Q6NZ09 (Proteasomal ubiquitin receptor ADRM1 OS=Danio rerio OX=7955 GN=adrm1b PE=1 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 3.2e-37
Identity = 120/386 (31.09%), Postives = 169/386 (43.78%), Query Frame = 0


Query: 11  LLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDEAVF 70
           L+EFRAGKM  +G  V PD RKG V I + ++ L+HF W DRT   +EDD I+FPD+  F
Sbjct: 22  LVEFRAGKMTLKGSTVTPDKRKGTVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDDCEF 81

Query: 71  EKVNQ-ASGRVYLLKFITDDRKFFFWMQEPKAEDDQQLCISVNEYINRP----------- 130
           ++VNQ  +GRVY+LKF    ++ FFWMQEPK + D + C  VNEY+N P           
Sbjct: 82  KRVNQCTTGRVYVLKFKAGSKRLFFWMQEPKTDKDDEYCRKVNEYLNNPPMPGALGSGGG 141

Query: 131 ---------------------------------------------LEFLEEEQPVAS--- 190
                                                           L    P  S   
Sbjct: 142 GGHELSALGEGGLQSLLGNMSHNQLMQLIGPTGLGGLGALAGPGLASLLGSGGPATSSST 201

Query: 191 ------------------------------TPLQVSEG--TVEENIPS----------SS 250
                                         TP   S G  TV    P+          +S
Sbjct: 202 SSSRSQSAAATPSSGSAARLSSTQAPTTPVTPAATSSGSPTVTPTTPAAQTPSLPAGPAS 261

Query: 251 SIQPVKLEDLQRILSNIESSDIDIDPDAGFGLGDLLKPDLIMPLLETLPLEQNLASYLPE 285
           S QP++L DLQ IL+ +    +  +  +G  L  +L PD++ P+L    ++Q L  YLP 
Sbjct: 262 STQPIQLSDLQSILATMNVPAMPTE-GSGVDLASVLTPDVMAPILANPEVQQRLLPYLPS 321

[Close]

BLAST of Sed0003073 vs. ExPASy Swiss-Prot
Match: A1L5A6 (Proteasomal ubiquitin receptor ADRM1 OS=Bos taurus OX=9913 GN=ADRM1 PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 4.6e-36
Identity = 113/382 (29.58%), Postives = 165/382 (43.19%), Query Frame = 0


Query: 11  LLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDEAVF 70
           L+EFRAGKM  +G  V PD RKGLV I + ++ L+HF W DRT   +EDD I+FPD+  F
Sbjct: 23  LVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDDCEF 82

Query: 71  EKVNQA-SGRVYLLKFITDDRKFFFWMQEPKAEDDQQLCISVNEYINRP----------- 130
           ++V Q  SGRVY+LKF    ++ FFWMQEPK + D++ C  VNEY+N P           
Sbjct: 83  KRVPQCPSGRVYVLKFKAGSKRLFFWMQEPKTDQDEEHCRKVNEYLNNPPMPGALGASGS 142

Query: 131 -------------LEFL------------------------------------------- 190
                        L+ L                                           
Sbjct: 143 GGHELSALGGEGGLQSLLGNMSHSQLMQLIGPAGLGGLGGLGALTGPGLASLLGSGGPPA 202

Query: 191 ------EEEQPVASTPLQVSEGTVEENIPS-----------------------SSSIQPV 250
                    Q  A TP   +  T     PS                       +S  QP+
Sbjct: 203 SSSSSSSRSQSAAVTPSSTTSSTRATPAPSAPAAASATSPSPAPSSGDGASTAASPAQPI 262

Query: 251 KLEDLQRILSNIESSDIDIDPDAG--FGLGDLLKPDLIMPLLETLPLEQNLASYLPEG-- 285
           +L DLQ IL+ +    +   P  G    L  +L P+++ P+L    +++ L  YLP G  
Sbjct: 263 QLSDLQSILATM---SVPAGPGGGQQVDLASVLTPEIMAPILANADVQERLLPYLPSGES 322

[Close]

BLAST of Sed0003073 vs. ExPASy Swiss-Prot
Match: Q98SH3 (Proteasomal ubiquitin receptor ADRM1 OS=Gallus gallus OX=9031 GN=ADRM1 PE=2 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 8.8e-35
Identity = 113/383 (29.50%), Postives = 166/383 (43.34%), Query Frame = 0


Query: 11  LLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDEAVF 70
           L+EFRAGKM  +G  V PD RKGLV I + ++ L+HF W DRT   +EDD I+FPD+  F
Sbjct: 23  LVEFRAGKMSLKGSTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDDCEF 82

Query: 71  EKVNQ-ASGRVYLLKFITDDRKFFFWMQEPKAEDDQQLCISVNEYINRP----------- 130
           ++V Q  +GRVY+LKF    ++ FFWMQEPK + D++ C  VNEY+N P           
Sbjct: 83  KRVPQCTTGRVYVLKFKAGSKRLFFWMQEPKTDKDEEHCRKVNEYLNNPPMPGALGGNAS 142

Query: 131 -------------LEFL------------------------------------------- 190
                        L+ L                                           
Sbjct: 143 GGHELSALGGEGGLQSLLGNMSHNQLMQLIGPTGLGGLGGLGALTGPGLASLLGSGGFPT 202

Query: 191 ------EEEQPVASTPLQVSEG---------------TVEENIPSSSS--------IQPV 250
                    Q  A TP   +                 T    +PSS S         QP+
Sbjct: 203 SSSSSSSRSQSAAVTPSSTTSSTHVTPAPAVPAAASVTSPSPVPSSGSGTSSATSPTQPI 262

Query: 251 KLEDLQRILSNIESSDIDIDPDAG---FGLGDLLKPDLIMPLLETLPLEQNLASYLPEG- 285
           +L DLQ IL+      +++   AG     L  +L P+++ P+L    +++ L  YLP G 
Sbjct: 263 QLSDLQNILAT-----MNVPSGAGGQQVDLATVLTPEIMAPILANAEVQERLMPYLPSGE 322

[Close]

BLAST of Sed0003073 vs. ExPASy Swiss-Prot
Match: Q6P877 (Proteasomal ubiquitin receptor ADRM1 OS=Xenopus tropicalis OX=8364 GN=adrm1 PE=2 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 8.8e-35
Identity = 109/388 (28.09%), Postives = 170/388 (43.81%), Query Frame = 0


Query: 11  LLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDEAVF 70
           L+EFRAGKM  +G  V PD RKGLV I + ++ L+HF W DRT   +EDD I+FPD+  F
Sbjct: 22  LVEFRAGKMSLKGSTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGSVEDDLIIFPDDCEF 81

Query: 71  EKVNQ-ASGRVYLLKFITDDRKFFFWMQEPKAEDDQQLCISVNEYINRP----------- 130
           ++V+Q  +GRVY+LKF    ++ FFWMQEPK + D++ C  VNEY+N P           
Sbjct: 82  KRVSQCTTGRVYVLKFKAGSKRLFFWMQEPKTDKDEEYCRKVNEYLNNPPMPGALGGSGS 141

Query: 131 -------------LEFL------------------------------------------- 190
                        L+ L                                           
Sbjct: 142 GGHELSALGGEGGLQSLLGNMSHNQLMQLIGPTGLGGLGGLGALTGPGLASLLGSGGPTT 201

Query: 191 ------EEEQPVASTPLQVSEGTVEENIP-----------------------SSSSIQPV 250
                    Q  A TP   +  T   + P                       ++S  QP+
Sbjct: 202 SSSSSSSRSQSAAVTPSSTTSSTRTTSAPAAPAAAPATTPSPAVSSNDGASAATSPTQPI 261

Query: 251 KLEDLQRILSNIESSDIDIDPDAGFG-----LGDLLKPDLIMPLLETLPLEQNLASYLPE 286
           +L DLQ IL+ +        P  G G     L  +L P+++ P+L    +++ L  YLP 
Sbjct: 262 QLSDLQNILATMNV------PATGEGGQQVDLASVLTPEIMAPILANAEVQERLMPYLPS 321

[Close]

BLAST of Sed0003073 vs. ExPASy TrEMBL
Match: A0A6J1HQU2 (26S proteasome regulatory subunit RPN13 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465791 PE=4 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 6.1e-148
Identity = 264/281 (93.95%), Postives = 273/281 (97.15%), Query Frame = 0


Query: 2   EKEPTWVEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQ 61
           E  P   EILLEFRAGKMCFEGKRV+PDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQ
Sbjct: 7   EAVPVMQEILLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQ 66

Query: 62  IVFPDEAVFEKVNQASGRVYLLKFITDDRKFFFWMQEPKAEDDQQLCISVNEYINRPLEF 121
           IVFPDEAVFEKVNQASGRVYLLKF TDDRKFFFWMQEPKAEDDQQLCISVN+YINRPLEF
Sbjct: 67  IVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYINRPLEF 126

Query: 122 LEEEQPVASTPLQVSEGTVEENIPSSSSIQPVKLEDLQRILSNIESSDIDIDPDAGFGLG 181
           LEEEQ VASTPLQVSEGTVEENIPSSSS++PVKLEDLQRILSNIESSDID+DPDAGFGLG
Sbjct: 127 LEEEQSVASTPLQVSEGTVEENIPSSSSLRPVKLEDLQRILSNIESSDIDVDPDAGFGLG 186

Query: 182 DLLKPDLIMPLLETLPLEQNLASYLPEGPWSPEDVLELLQSPPFRQQVESFTYVLRTGQI 241
           DLLKPDLIMPLLETLPLEQ+LASYLPEGPWSPED+LELLQSPPFRQQV+SFTYVLRTGQI
Sbjct: 187 DLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVDSFTYVLRTGQI 246

Query: 242 DLSQFGIDPSKYKFTVLSFLEALEDSVSKMSNSEVGQDDKD 283
           DLSQFGIDPSKYKFTVLSFLEALEDSVSKMSNSE GQD+KD
Sbjct: 247 DLSQFGIDPSKYKFTVLSFLEALEDSVSKMSNSEAGQDEKD 287

[Close]

BLAST of Sed0003073 vs. ExPASy TrEMBL
Match: A0A6J1FGU3 (26S proteasome regulatory subunit RPN13 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444058 PE=4 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 2.3e-147
Identity = 263/281 (93.59%), Postives = 273/281 (97.15%), Query Frame = 0


Query: 2   EKEPTWVEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQ 61
           E  P   EILLEFRAGKMCFEGKRV+PDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQ
Sbjct: 7   EAVPVMQEILLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQ 66

Query: 62  IVFPDEAVFEKVNQASGRVYLLKFITDDRKFFFWMQEPKAEDDQQLCISVNEYINRPLEF 121
           IVFPDEAVFEKVNQASGRVYLLKF TDDRKFFFWMQEPKAEDDQQLCISVN+YINRPLEF
Sbjct: 67  IVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYINRPLEF 126

Query: 122 LEEEQPVASTPLQVSEGTVEENIPSSSSIQPVKLEDLQRILSNIESSDIDIDPDAGFGLG 181
           LEEEQ VASTPLQVSEGTVEENIPSSSS++PVKLEDLQRILSNIESSDID+DPDAGFGLG
Sbjct: 127 LEEEQSVASTPLQVSEGTVEENIPSSSSLRPVKLEDLQRILSNIESSDIDVDPDAGFGLG 186

Query: 182 DLLKPDLIMPLLETLPLEQNLASYLPEGPWSPEDVLELLQSPPFRQQVESFTYVLRTGQI 241
           DLLKPDLIMPLLETLPLEQ+LASYLPEGPWSPED+LELLQSPPFRQQV+SFTYVLRTGQI
Sbjct: 187 DLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVDSFTYVLRTGQI 246

Query: 242 DLSQFGIDPSKYKFTVLSFLEALEDSVSKMSNSEVGQDDKD 283
           DLSQFGIDPSKYKFTVLSFLEALEDSVSKMS+SE GQD+KD
Sbjct: 247 DLSQFGIDPSKYKFTVLSFLEALEDSVSKMSSSEAGQDEKD 287

[Close]

BLAST of Sed0003073 vs. ExPASy TrEMBL
Match: A0A6J1HM16 (26S proteasome regulatory subunit RPN13 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465791 PE=4 SV=1)

HSP 1 Score: 528.9 bits (1361), Expect = 1.5e-146
Identity = 264/282 (93.62%), Postives = 273/282 (96.81%), Query Frame = 0


Query: 2   EKEPTWVEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQ 61
           E  P   EILLEFRAGKMCFEGKRV+PDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQ
Sbjct: 7   EAVPVMQEILLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQ 66

Query: 62  IVFPDEAVFEKVNQASGRVYLLKFITDDRKFFFWMQEPKAEDDQQLCISVNEYINRPLEF 121
           IVFPDEAVFEKVNQASGRVYLLKF TDDRKFFFWMQEPKAEDDQQLCISVN+YINRPLEF
Sbjct: 67  IVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYINRPLEF 126

Query: 122 LEEEQPVASTPLQVSEGTVEENIPSSSSIQPVKLEDLQRILSNIESS-DIDIDPDAGFGL 181
           LEEEQ VASTPLQVSEGTVEENIPSSSS++PVKLEDLQRILSNIESS DID+DPDAGFGL
Sbjct: 127 LEEEQSVASTPLQVSEGTVEENIPSSSSLRPVKLEDLQRILSNIESSADIDVDPDAGFGL 186

Query: 182 GDLLKPDLIMPLLETLPLEQNLASYLPEGPWSPEDVLELLQSPPFRQQVESFTYVLRTGQ 241
           GDLLKPDLIMPLLETLPLEQ+LASYLPEGPWSPED+LELLQSPPFRQQV+SFTYVLRTGQ
Sbjct: 187 GDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVDSFTYVLRTGQ 246

Query: 242 IDLSQFGIDPSKYKFTVLSFLEALEDSVSKMSNSEVGQDDKD 283
           IDLSQFGIDPSKYKFTVLSFLEALEDSVSKMSNSE GQD+KD
Sbjct: 247 IDLSQFGIDPSKYKFTVLSFLEALEDSVSKMSNSEAGQDEKD 288

[Close]

BLAST of Sed0003073 vs. ExPASy TrEMBL
Match: A0A6J1FC45 (26S proteasome regulatory subunit RPN13 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444058 PE=4 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 5.7e-146
Identity = 263/282 (93.26%), Postives = 273/282 (96.81%), Query Frame = 0


Query: 2   EKEPTWVEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQ 61
           E  P   EILLEFRAGKMCFEGKRV+PDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQ
Sbjct: 7   EAVPVMQEILLEFRAGKMCFEGKRVMPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQ 66

Query: 62  IVFPDEAVFEKVNQASGRVYLLKFITDDRKFFFWMQEPKAEDDQQLCISVNEYINRPLEF 121
           IVFPDEAVFEKVNQASGRVYLLKF TDDRKFFFWMQEPKAEDDQQLCISVN+YINRPLEF
Sbjct: 67  IVFPDEAVFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEDDQQLCISVNDYINRPLEF 126

Query: 122 LEEEQPVASTPLQVSEGTVEENIPSSSSIQPVKLEDLQRILSNIESS-DIDIDPDAGFGL 181
           LEEEQ VASTPLQVSEGTVEENIPSSSS++PVKLEDLQRILSNIESS DID+DPDAGFGL
Sbjct: 127 LEEEQSVASTPLQVSEGTVEENIPSSSSLRPVKLEDLQRILSNIESSADIDVDPDAGFGL 186

Query: 182 GDLLKPDLIMPLLETLPLEQNLASYLPEGPWSPEDVLELLQSPPFRQQVESFTYVLRTGQ 241
           GDLLKPDLIMPLLETLPLEQ+LASYLPEGPWSPED+LELLQSPPFRQQV+SFTYVLRTGQ
Sbjct: 187 GDLLKPDLIMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVDSFTYVLRTGQ 246

Query: 242 IDLSQFGIDPSKYKFTVLSFLEALEDSVSKMSNSEVGQDDKD 283
           IDLSQFGIDPSKYKFTVLSFLEALEDSVSKMS+SE GQD+KD
Sbjct: 247 IDLSQFGIDPSKYKFTVLSFLEALEDSVSKMSSSEAGQDEKD 288

[Close]

BLAST of Sed0003073 vs. ExPASy TrEMBL
Match: A0A6J1D7V9 (26S proteasome regulatory subunit RPN13 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018182 PE=4 SV=1)

HSP 1 Score: 521.2 bits (1341), Expect = 3.1e-144
Identity = 258/274 (94.16%), Postives = 269/274 (98.18%), Query Frame = 0


Query: 9   EILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDEA 68
           EILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDEA
Sbjct: 14  EILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQIVFPDEA 73

Query: 69  VFEKVNQASGRVYLLKFITDDRKFFFWMQEPKAEDDQQLCISVNEYINRPLEFLEEEQPV 128
           VFEKVNQASGRVYLLKF TDDRKFFFWMQEPKAE+DQQLC S+N+Y+NRPLEFLEEE PV
Sbjct: 74  VFEKVNQASGRVYLLKFKTDDRKFFFWMQEPKAEEDQQLCSSINDYLNRPLEFLEEE-PV 133

Query: 129 ASTPLQVSEGTVEENIPSSSSIQPVKLEDLQRILSNIESSDIDIDPDAGFGLGDLLKPDL 188
           ASTP+QVSEGTVEENIPSSSS++PVKLEDLQRILSNI+SSDID+DPDAGFGLGDLLKPDL
Sbjct: 134 ASTPIQVSEGTVEENIPSSSSLRPVKLEDLQRILSNIDSSDIDLDPDAGFGLGDLLKPDL 193

Query: 189 IMPLLETLPLEQNLASYLPEGPWSPEDVLELLQSPPFRQQVESFTYVLRTGQIDLSQFGI 248
           IMPLLETLPLEQ+LASYLPEGPWSPED+LELLQSPPFRQQVESFTYVLRTGQIDLSQFGI
Sbjct: 194 IMPLLETLPLEQSLASYLPEGPWSPEDILELLQSPPFRQQVESFTYVLRTGQIDLSQFGI 253

Query: 249 DPSKYKFTVLSFLEALEDSVSKMSNSEVGQDDKD 283
           DPSKYKFTVLSFLEALEDSVSKM NSE GQDDKD
Sbjct: 254 DPSKYKFTVLSFLEALEDSVSKMPNSEQGQDDKD 286

[Close]

BLAST of Sed0003073 vs. TAIR 10
Match: AT2G26590.1 (regulatory particle non-ATPase 13 )

HSP 1 Score: 356.7 bits (914), Expect = 2.0e-98
Identity = 185/296 (62.50%), Postives = 220/296 (74.32%), Query Frame = 0


Query: 2   EKEPTWVEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQ 61
           E  P   EI+LEFRAGKM  +G RVVPD RKGLVRI RG+EGL+HFQWLDR QN +EDDQ
Sbjct: 5   EAFPVMQEIMLEFRAGKMSLQGTRVVPDARKGLVRIARGDEGLIHFQWLDRNQNTVEDDQ 64

Query: 62  IVFPDEAVFEKVNQASGRVYLLKFITDDRKFFFWMQEPKAEDDQQLCISVNEYINRPLEF 121
           IVFPDEA+FEKVNQ+S RVY+LKF +DDRK FFWMQEP+AE D +LC SVN+Y+N+PLEF
Sbjct: 65  IVFPDEALFEKVNQSSDRVYILKFNSDDRKLFFWMQEPRAEGDAELCSSVNQYLNQPLEF 124

Query: 122 LEEEQPVASTPLQVSEGTVEENIPS-----------------SSSIQPVKLEDLQRILSN 181
             EE  +A+   +  E   E+N  S                 +SS  PVKL DLQRIL+N
Sbjct: 125 PGEE-GLAAAITEELEDMAEDNTSSRAGNLVVPNLSSEVSDVTSSSGPVKLADLQRILNN 184

Query: 182 IESSDIDI--DPDAGFGLGDLLKPDLIMPLLETLPLEQNLASYLPEGPWSPEDVLELLQS 241
           +    + I  D D G  LGD+LKP+LIMPLLE LP+++ L+S+LPEG    ED+LELLQS
Sbjct: 185 LSGGPVGIAGDQDEGLALGDILKPELIMPLLEALPVQERLSSHLPEGHSRAEDILELLQS 244

Query: 242 PPFRQQVESFTYVLRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVSKMSNSEVGQ 279
           PPFRQQV++FTYVLRTGQIDL+QFGIDPSKYKFTV SFLEALEDSVS  S   + +
Sbjct: 245 PPFRQQVDAFTYVLRTGQIDLTQFGIDPSKYKFTVDSFLEALEDSVSTQSRDAMDE 299

[Close]

BLAST of Sed0003073 vs. TAIR 10
Match: AT2G26590.2 (regulatory particle non-ATPase 13 )

HSP 1 Score: 356.7 bits (914), Expect = 2.0e-98
Identity = 185/296 (62.50%), Postives = 220/296 (74.32%), Query Frame = 0


Query: 2   EKEPTWVEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQ 61
           E  P   EI+LEFRAGKM  +G RVVPD RKGLVRI RG+EGL+HFQWLDR QN +EDDQ
Sbjct: 5   EAFPVMQEIMLEFRAGKMSLQGTRVVPDARKGLVRIARGDEGLIHFQWLDRNQNTVEDDQ 64

Query: 62  IVFPDEAVFEKVNQASGRVYLLKFITDDRKFFFWMQEPKAEDDQQLCISVNEYINRPLEF 121
           IVFPDEA+FEKVNQ+S RVY+LKF +DDRK FFWMQEP+AE D +LC SVN+Y+N+PLEF
Sbjct: 65  IVFPDEALFEKVNQSSDRVYILKFNSDDRKLFFWMQEPRAEGDAELCSSVNQYLNQPLEF 124

Query: 122 LEEEQPVASTPLQVSEGTVEENIPS-----------------SSSIQPVKLEDLQRILSN 181
             EE  +A+   +  E   E+N  S                 +SS  PVKL DLQRIL+N
Sbjct: 125 PGEE-GLAAAITEELEDMAEDNTSSRAGNLVVPNLSSEVSDVTSSSGPVKLADLQRILNN 184

Query: 182 IESSDIDI--DPDAGFGLGDLLKPDLIMPLLETLPLEQNLASYLPEGPWSPEDVLELLQS 241
           +    + I  D D G  LGD+LKP+LIMPLLE LP+++ L+S+LPEG    ED+LELLQS
Sbjct: 185 LSGGPVGIAGDQDEGLALGDILKPELIMPLLEALPVQERLSSHLPEGHSRAEDILELLQS 244

Query: 242 PPFRQQVESFTYVLRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVSKMSNSEVGQ 279
           PPFRQQV++FTYVLRTGQIDL+QFGIDPSKYKFTV SFLEALEDSVS  S   + +
Sbjct: 245 PPFRQQVDAFTYVLRTGQIDLTQFGIDPSKYKFTVDSFLEALEDSVSTQSRDAMDE 299

[Close]

BLAST of Sed0003073 vs. TAIR 10
Match: AT2G26590.3 (regulatory particle non-ATPase 13 )

HSP 1 Score: 356.7 bits (914), Expect = 2.0e-98
Identity = 185/296 (62.50%), Postives = 220/296 (74.32%), Query Frame = 0


Query: 2   EKEPTWVEILLEFRAGKMCFEGKRVVPDTRKGLVRIGRGEEGLLHFQWLDRTQNVIEDDQ 61
           E  P   EI+LEFRAGKM  +G RVVPD RKGLVRI RG+EGL+HFQWLDR QN +EDDQ
Sbjct: 5   EAFPVMQEIMLEFRAGKMSLQGTRVVPDARKGLVRIARGDEGLIHFQWLDRNQNTVEDDQ 64

Query: 62  IVFPDEAVFEKVNQASGRVYLLKFITDDRKFFFWMQEPKAEDDQQLCISVNEYINRPLEF 121
           IVFPDEA+FEKVNQ+S RVY+LKF +DDRK FFWMQEP+AE D +LC SVN+Y+N+PLEF
Sbjct: 65  IVFPDEALFEKVNQSSDRVYILKFNSDDRKLFFWMQEPRAEGDAELCSSVNQYLNQPLEF 124

Query: 122 LEEEQPVASTPLQVSEGTVEENIPS-----------------SSSIQPVKLEDLQRILSN 181
             EE  +A+   +  E   E+N  S                 +SS  PVKL DLQRIL+N
Sbjct: 125 PGEE-GLAAAITEELEDMAEDNTSSRAGNLVVPNLSSEVSDVTSSSGPVKLADLQRILNN 184

Query: 182 IESSDIDI--DPDAGFGLGDLLKPDLIMPLLETLPLEQNLASYLPEGPWSPEDVLELLQS 241
           +    + I  D D G  LGD+LKP+LIMPLLE LP+++ L+S+LPEG    ED+LELLQS
Sbjct: 185 LSGGPVGIAGDQDEGLALGDILKPELIMPLLEALPVQERLSSHLPEGHSRAEDILELLQS 244

Query: 242 PPFRQQVESFTYVLRTGQIDLSQFGIDPSKYKFTVLSFLEALEDSVSKMSNSEVGQ 279
           PPFRQQV++FTYVLRTGQIDL+QFGIDPSKYKFTV SFLEALEDSVS  S   + +
Sbjct: 245 PPFRQQVDAFTYVLRTGQIDLTQFGIDPSKYKFTVDSFLEALEDSVSTQSRDAMDE 299

The following BLAST results are available for this feature:

BLAST of Sed0003073 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022966078.1	1.3e-147	93.95	26S proteasome regulatory subunit RPN13 isoform X2 [Cucurbita maxima]	[more]
XP_022937753.1	4.8e-147	93.59	26S proteasome regulatory subunit RPN13 isoform X2 [Cucurbita moschata] >XP_0235...	[more]
KAG6586125.1	6.2e-147	93.24	26S proteasome regulatory subunit RPN13, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_022966077.1	3.1e-146	93.62	26S proteasome regulatory subunit RPN13 isoform X1 [Cucurbita maxima]	[more]
XP_022937752.1	1.2e-145	93.26	26S proteasome regulatory subunit RPN13 isoform X1 [Cucurbita moschata] >XP_0235...	[more]

BLAST of Sed0003073 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48726	2.8e-97	62.50	26S proteasome regulatory subunit RPN13 OS=Arabidopsis thaliana OX=3702 GN=RPN13...	[more]
Q6NZ09	3.2e-37	31.09	Proteasomal ubiquitin receptor ADRM1 OS=Danio rerio OX=7955 GN=adrm1b PE=1 SV=1	[more]
A1L5A6	4.6e-36	29.58	Proteasomal ubiquitin receptor ADRM1 OS=Bos taurus OX=9913 GN=ADRM1 PE=2 SV=1	[more]
Q98SH3	8.8e-35	29.50	Proteasomal ubiquitin receptor ADRM1 OS=Gallus gallus OX=9031 GN=ADRM1 PE=2 SV=1	[more]
Q6P877	8.8e-35	28.09	Proteasomal ubiquitin receptor ADRM1 OS=Xenopus tropicalis OX=8364 GN=adrm1 PE=2...	[more]

BLAST of Sed0003073 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HQU2	6.1e-148	93.95	26S proteasome regulatory subunit RPN13 isoform X2 OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1FGU3	2.3e-147	93.59	26S proteasome regulatory subunit RPN13 isoform X2 OS=Cucurbita moschata OX=3662...	[more]
A0A6J1HM16	1.5e-146	93.62	26S proteasome regulatory subunit RPN13 isoform X1 OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1FC45	5.7e-146	93.26	26S proteasome regulatory subunit RPN13 isoform X1 OS=Cucurbita moschata OX=3662...	[more]
A0A6J1D7V9	3.1e-144	94.16	26S proteasome regulatory subunit RPN13 isoform X1 OS=Momordica charantia OX=367...	[more]

BLAST of Sed0003073 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26590.1	2.0e-98	62.50	regulatory particle non-ATPase 13	[more]
AT2G26590.2	2.0e-98	62.50	regulatory particle non-ATPase 13	[more]
AT2G26590.3	2.0e-98	62.50	regulatory particle non-ATPase 13	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038108	RPN13, DEUBAD domain superfamily	GENE3D	1.10.2020.20		coord: 159..268 e-value: 8.9E-20 score: 72.8
IPR038633	Proteasomal ubiquitin receptor Rpn13/ADRM1, Pru domain superfamily	GENE3D	2.30.29.70	Proteasomal ubiquitin receptor Rpn13/ADRM1	coord: 8..119 e-value: 3.7E-37 score: 128.7
IPR032368	RPN13, DEUBAD domain	PFAM	PF16550	RPN13_C	coord: 159..264 e-value: 9.2E-24 score: 83.8
IPR044868	Rpn13/ADRM1, Pru domain	PFAM	PF04683	Proteasom_Rpn13	coord: 17..98 e-value: 9.8E-24 score: 83.7
IPR044868	Rpn13/ADRM1, Pru domain	PROSITE	PS51917	PRU	coord: 6..118 score: 50.550743
IPR006773	Proteasomal ubiquitin receptor Rpn13/ADRM1	PANTHER	PTHR12225	ADHESION REGULATING MOLECULE 1 110 KDA CELL MEMBRANE GLYCOPROTEIN	coord: 9..275
IPR044867	DEUBAD domain	PROSITE	PS51916	DEUBAD	coord: 171..274 score: 13.691562
None	No IPR available	CDD	cd13314	PH_Rpn13	coord: 12..115 e-value: 9.34392E-55 score: 172.069

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003073.1	Sed0003073.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000502	proteasome complex