Sed0003038 (gene) Chayote v1

Overview


Name	Sed0003038
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Peptide chain release factor 1
Location	LG10: 33268492 .. 33279047 (-)
RNA-Seq Expression	Sed0003038
Synteny	Sed0003038

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCTGGAAATCCGCCACGATTCTCAGCCTTCCCGTTCCGACAGCCAGCACCGGCAGATTGGGAAGGTTTTGTTGTACATTCCGGCATCAGAAATTCGACCGCCCTTTCTTCTTCTTCTTCAACTCGTTGCGTTCCAATTGCAGCTCCGGTGGTGCAAATTCAGCCCAAAATGGGAAAGAGTATATGGTTTTGTCCGACGACGAGCTCATGAAACAGTGCGAGTTGAGCACGTTTAAGTCCTCCGGTCCCGGTGGCCAGCATCGCAACAAGCGCGAATCCGCTGTCCGATTGAAGCACATTCCCACTGGTATCATTGCTCAGGTTTCTGTTTCTCCGATACATGTAATCCTGTTCCATAATGTGGTTTTGTTTCATTTGCTTTTGAGTTTGATTCTTTGGCCCTTTATTTTGAAGGCTGTCGAGGATCGATCGCAGCATATGAATCGAGCAAGTGCTTTGGCTCGCCTTCGTGCTCTCTTGGCCCTGAAAGGTGGGTGACTGAACATTATACCATATTTGCCTTTTGAGTATTTGAAACTAAAATTTAAAACTTTTGATCAATTTGGGTGTTAAACAATACAAATATTGTTGTAAATAGCAAATTTTATCCCTATTTTAAAATAATTTCATAAATACCAAAATATTTCAACTTTCATAGTTCCAATCAATTACACTTCTTGTTTTCAATCGTTTTAACTTGATTGAAGTCATAATTTTGTGTGCTTGATTGAAGCCATTTGTTGCTATATTTGAACTTTTTCTAAAATTTTAACATCTATACTGTTTTTTTCTTATTCATGAAAAATCCCCAAAATAATAACAAACAAATTTTTTTCCCTATTTGGTTCTATGCAACGTGAATGAACATTAAACCAAACTTGGCTTTTTGAACATTAGGAACTAGAATTCAAAACTCTGATCAATTTTAGCATTAAAGAAAAACAAACAAAAGTTCGTTCCAATTGTGTTCTATGCAACATTTGAATAAAAAACTAGACTAAACTTGGCCTTTTCAACATTAGGAACTAGTATCTAAAACTTTGATCAATTTAAGCGTTAAAGAATAACAAACAAAAGTTCATTCTGATTGTGTTCCATGCTTATTTTTATCCAATTTTCCATAATGATATATGATATGCCTTTCTGTACGTTGAGCTCAGTCAGGAACCCTGTGGATCTTGAAGATTATTCACCTCCTCCTGAGCTTCTCCAAATTCTCCCTTTGAAGTCCACTATCAGGCCGCGGGAATGTGGCCCTCAAATTGGTCCTAAAAATTCTAAATTTCTTCCGGTTTCTCTCTATTCTTTATCTGTCAATATGTCTCTGTTCTGTGTACTTGTGGGTGTGTTTTTATAATTTGATTTTCTTGTTATATGAGAAGGATATGAAGGTGATAGCTGAAATTACCTATTTTGCAGGGGATGCAAGCTCTATTGGATCTAATTTCCACACTTGACGGTTCTATATCAGACACAGCTAAGATTTTGGGGTATGTATGCTATTCATGTGCTAGCCTTTGTTTCCAACATAACTAAGCATCCATAGTTGAGTGTTACGAATGGGAATGTTTCAGTTCTGTGAGGAGATTGAGATTTTATAAGAAATTGAGAGTTCTGATGTACGGATGTTAAGGGTTGTCAGGAAAATTAGTGGAAGGGAGATCATTGCTAGATTTATGGTTTTTTTTATGTAGGAGTGTTAAAGAATAATGATTTTGTCAAGTGCATGACAGAAGGGTGTTTGGACCTGAAGATGTTTGAGGATATTTTTCTTAGCAAGTGTCTACTTTGGATCACTATGATTGGGAGGAAGGGTTTTCCATTTCTTTTGTTATTTCCCAGGATTGTATCACTTTTGTCTACGACATACTTAGCTTTATGTTTATCTTGGAGTTGCCGTCTCCATCCTTTTTGTGATTATAGTCTTTCCTATATAAACTGGATTGTTTTTTGGTAACTAGTTTCAATAGGATCATGAAAAGTTTTGTTTTCTATAAAAGAAAGATGACATCACTTTCACCATGAAGAGTTGGCTATGTTGGGTCCCACATTGGTTAGAGTATATAAGTGATGACAACCATCTTTATTGGTATGAGACCTTTGGGTGAAAAAAAAACAAAGCCAGAAGGATATATGTCCAAAGTGGACAATATTATATTGATATGGAGATCCGGGTTGGATTATCGTCCTTATCAGACTCTATCCTTATTTATAGGAACGCCAAATTTTACATGTATTGAACATTTGGCTTATTGAGAATGGATATGGCGCTTTTATGTTGAAAAAAGGCCATTTAGAGATGTATTATTGTTCCAAAATATGGTTCTTTTTGTTTTAACCAAAAACCAGGTAGAATTTCGTTATTCGCGTCACATGGCCCATGGAAATCCATTGAAAACTTGCAAGCATATAATGATATAACTATTGTGTTGGAAAGAGAGTCAAAACCTTGTTTTGGATGGATGTTTTGTTGGGAATTCAGTATCTCCAAGCCATGTATTGTAGTTGGGATCATCTGTCTTTAAAAAAGGAGACTTGTCATCCCCAAGGGGTGGCACGGTGGTCGAAGGCTTGGACTTTGAAGGTGTGTTCCTCTCAAGGTCCCAGGTTCGAGACCTACTCATCACATTAATTTGTAGACACCTCACGTATCTCCATTCCTTTGATGTCTCTCGGTGTCCCGCCTAGGGACAGACGTGGTTATCTTGGGTATTGTGGAGCGAAGGTTTGATTTCCTGATTTCAAAAAAAGAAGAAAAAGACTTGTCAAATTATGTCGGTCTTTCTGCATCCTCACTGATAAAACTTACTTTTGCAATCTATTTCACTTATCATTTTGATATAAAAAATGTCTCTCTATATATATTTGCTCATTGCGATTTCATGAGCGAATAAGTCACAGAATAGTTATAAAATTCTTGTATTATCTGTAGCTGTTATATAGATGACATTTGAAGATGATCCTTCATTAAAATTTTAAATGACATTTGAAGATGATCCTTCATTAAAATTTTAACCTGGTTTCCACTATCTGAAAATGCGATAAACTATGAATATTAATTGTAAGCCATTATGGGTTACCGATTGTCTTGGGAACTATAAAATGCTTAAAGGGATTGTGTTCTATTCATGGTGATCACCTATCCAAGAATTAATTTCCTATGAGTTTTCTTGACTACCAAATTGATAGAATCTACCACACTTTTCTATTAAAAATAAGATAAACCTCTCGAGAGAATCTCTCAAAGAGCCGCAATACAATAATGATAATTCGATAAATAAAAGAGTAACCTAGTCCGCCTATTTATAGCCTTCCTAGGATTTAACCTAACTTTGTAAATAACTCTATTTAGGCCCATAGGCCCATTACAAACTAAATGTGCATAATAAAATATATTAAAATAGTAATTAACTCATTCTTCACTTCTTGCTTCGCCTCGAATATACTTTTAATGATGCTGGGATCGTATCAATACTTCCCCCCCACAGAGCCACCTTGTCCTCAAGGTGAAAGTCCGGAAATTGCAATTCCAAATCAGCCGCGGACTCCCAAGTCGCATCCTCTGGTGCGTAGCCTTCCCATTGAACCAAAACTTGACGCGATCCGGCCGCGTGGAAATTCTCCTGGGCGCCCAACACAAATTTTTAGGGCGAACCACTATGCACGAGATCATCTCCCACCAAGGACGGTGTAGACATGACAAGAACCGACGAGTCTCCCGCTTTACGCAGAATCGACACGTGAAAAACCGGTGAATCTTAATCTGCCGCGGAAGTTCCAAACGATAAGCAACAGGGACCTACTCGAGCCAAAGACACTGCGGTAGGGCCCAATAAACCTCGCGCCCGGCTGGGTGTTGAAATTTAGCCAAAGAAGATTGGCGGTATGGTCAAAGCTTGATATACACCGGATCATCAATATTAAATCAGTATCCCCTACGCTTTGCGCTTGCGCGATCCGCCATAGATTGTTGCGCTGCAACAAGCTAGCCTTTAATGTGGTCAAGATCCGATCACGATCCTTCATCAATGAATCCACCGATGCCATCGGGCTAACTCGTGATCATAACCCAACAGGTAGGGGTCGCGCCTAAATAATCTCGAAAGGTGTCATACCCGTGGATGAGTGGAAAGAAGTGTTAAAGCTGTACTCCGCCCAGGACAACCATTAGTACCACGCCTTAGGATGATGCATCACAAAACACCTCAAATAGGATTCCAGACAACGATTCACCACCTCGATCGCCCATCGATGCGTGGATGGTAAGTGGTGCTCCGACACAGTTTAGTGCCCGTAGCCTTGAACATCTCTTCCCAAAGCAAACTCGTAAAGACCTTATCGCGGTCAGATACAATACTTTTTGGAATTCCGTGCAACCGAACAATCTCCTTGATAAACACCTTTGACACCGACAAGGAAGAAAACGGGTGTCGAAGAGGTATGAAATGAGAATATTTGGACAAACGGTCAACCACCACCAGTATAGTGTCAAAACCCTCGGATCGCGGTAAACCTTCCACAAAGTCCATCGAAATATCTTCCCAGACCTGTGCAGGGATCGGCAAAGGCTTGTATCAACCCCGCAGGAGATAAGGATAGGTGTTTAGCTTGAACACAGATAGAGCATTCAGCCACAAAGGAACGCACACGAGCCTTCATTCCTTGCCAATACACCTCCTTAGCTACGATAAGTTTTTAAGGACTCAAATGTCCCCAATAGCACCACTATGGAATTCAAGCAAAAGTAGAGGAATCGTTGGGGATGTCGGAGGCAAAACAAGCCGACCCTGATAAAGCAACACATCACCAACTACTGAGTATCCCTGAGGCCCCTTACCAATGGTCACGACTTATAAATTTCCATCACTTTATCATCCTCTTTAACTCACATATAAATACGGCGGTGTTAATACCCGCCACCACACTCGAAGATGCCAAGCTCGCATTTCTGGGCATGCGTGACAAGGCATCCGCACTCTATTTTCAAGGCCCTTCTTATATTCGATGTCAAATCATAACCCATTAATTTCGCAATCCATCACGATAGTCGCCATCCACTACACGCTTCAAGAAGAAATTTCAGACTCTTACCGTCGAGACGAACAACAAAGTGATGCCCTAACAGATAGGCCCGCCAAATACCCACCACGCGAAAACGATTGCCATCAACTCACGCTCATACACCGGTTTCACCCGATGAGTAATTGGCAATGCCCCGCTAAAATATGCTATCGGTGACCTGTTGCATCGAATCGCTCCCACCCCGATGCCCGGCATCGGTTTCGACCACAAATACTTGGTCAAAATCGCAATCGCGCAGACCTGCACACTACTCATAGCATGTTTCGATCACGAAAATCGTCTTCTTGGGTCCCCCCCACTCAAACTTCCCCTTCTTTAATAGCCGGGTCAACGGAAAAGCCATGGAACCGTAGTTAGCCACAAAACGTCGATAGTAACCTGCTAACCCGAGAATCCTCGGAGGTCCCGAATATTTCGAGGACTAGGCCACTCTATCATCGCCGTGATCTTTGCCGGCCTCGGGCAGACGCCTTCCACAGATATAAAGTGCCCTAAGTACTCAATACGTTGCAACCCAAATTGGCACTTCTTCGCATTTGCGATTTAAAGCATGTGCTCGCAACACCTCAAAAACACGAGCCGTGCTCCTCGTGTTCCCGAATAGTCATGTCAGAAATCAAAATATCATCAAAAATACCAAAGACGAACTTACGCAGATATGACCGCAAAATCTCATTCATCACGCATCGAACGTGGCGGAGCATTCCGCAACCCAAAGGGCATGACAACAAACTCGTAATGTCCTTCATGCGTTCGAAAAGTCAGTTTTGTATACGCGGTCGGTTTGACACGAATTTGGTGATATCCAAATTTAGATCAATTTTCGAGAAAACAGACGCGCCATGAAGCTCATCCAACAACTCATCCACCAAATGTATCGGGTATTTATCCTGGGATCAGTAGCTCCGATTTAATGCACGGTAATCGACACGTAAACGCCAACTTCCATCCTTCTTTTCACTAACAACACCGGGCTAGAGAAAGAGCTCGTGCTAGGGCGAATTACCCCGGCTAACAACATTTCCCGTACTAGTTTTTCTATCTCGTTTTTCTGATATTGTGGGTACCGATATGGCCGGACATTCACTGAGTTCGTCCCCGCAATCAGTTCAATCGCATGATCACAGTTTCTTTCAGGAGGTAAATCTGCCAAAGATTGAAAAACCGGTGAAAAAGATTTAATTAAAGAGTGAAGCTCTCGGGTACCCGCGATAAATCCGGAGCATCTTGGTTGGTTCACAATCCTGTGTTGTCACCTCACACATGTTCAACTCGACCAGTAATCCTTGGTCCTCAGGTCGTAAGGATTTCATCATGGATTTCAAGGATACTTGAGCCTTGACCAACCTGGGGTCCCCTTGCAATTCTGCCTGCCAGGACCCCAACACAAACCGCATCTTCAGGGAACTGAAATTGAATTCTATCCTTCCCAATGTTTCTAGCCATGCCACCCCCAAAATCACATCTGCGCTACCTAAAGGTAAGGGTAGGAATTCATGTACCACTTTCAATTCAGCAAGGTGTAGCACCACATTTTTACAGATTCCCGCCGTTCGCACAGATTCGCCGGTTCCCAACATGATGCCATAATCATTTGAGGGCTCTATCGGCAACTTTAACTTCTCCACAATGACGTCGGAAATAAAGTTATGGGTGGCCCCACAATCTATCAAAACTACCACTTCTAACCCCTGAATAAATCCAGTGACCTTCAAAGTCTTCGGCGAGCTCAGCCCCGCCAATGAGTTTAAGGACAACGCCGCTAAATCCCTTGTATCGCCCGTATCTACAAAAGTTTCATCCTCCAGTGCCTCATCATTTTCGGACGAATCCTCGTGGTCATAGGTGTCGCGTACTACCAATATCTCCAAAGATTGAAGTTCTTTCTTTTTGCATCGGTGCCCGGGCACAAATCTCTCGTCGCAACGGAAACACAACCCCTTATCCTTCCTGACACGGATTTCACTGTCTGTCAAACGCTTATACGGCGTAGTGGTCGTTGTACTGTTTGTAACTGGTTTAGACGTTGAGAATGTAGTCGTTCTCATAGTTGCAACACCCGTTCCCTTCGTGCTAACAAGTCCTGATCCCCCACTTGTTCTGTTCACTAGTCCCGGGCTCACCCCTTTTCCTAGTGCTCGGAAGGCCAGATCATCCTCAATTACTTGTGCCATAAACTTTTTATCTTGTATTCCCACGGGTCGCAATTTTCTCATTTCACTCCTTATTTCTTCTTTTAAGCCGCTCTCCCATTTCCCTTCTAACGCACTGGCACTAATATCGCGCATTCTCTTAGCATATTTCTCAAACGATCGCCCGATATTCTTTAACAAGACCCTCTTGTCGCAAAACTCATCGACCTTAGCGCACTGTTGTCATTTATGCCGGGTTGGAATCGGTGTAACAGAGCTCACGAAATTCTTCCCAAGAACCGATCGGTGATCGATCTTCCTCGTCTTCGCAACCATTCCAGGGCCTCACCTCCATACACAAAGCCGCGGCGTCGACTCGTTCTGCCCGCTTAATCGGTTAACCCAAAAATACCGCTCCACTCGACACAACCAACCTTCCGATCCTCATCGGTAAGACCCTTTAAAACGGCATCTCGAGCTTCGAACCTCCTCACAAATCATCGGACTCGCTCAATCTCCTATGTTCGGTCCTCCTGCTTCATATCGGTCCTCCCACTCTCTCCAGCCTTCCCGGTCTCCTCTCGATTACGCCATCCCACCCCGCTCGTTCCAACCGCCGTCAGGCGCTATTGGTCTGCTATAACCCATGCGCACCCTCCTCTCTCTCCTCCGTGACTCGTGGACCCGGCCATTACTCCCATCACCAAACTCCGGTATCTCTCTCTCTGGTCCCGCTCAAATGGTCCAAACCGACCCGACCCGAACAACCCGACCCGACCCGGTCCCCTCTTGACCGCCCGCGTGCCCCCGACGCTCGCTGCTGCTGCCGGCGCCACACCCGACACCAGACGCCGCCGCGACCCTCTCGCCCCGACACCGCCCGAGCCCTCACCCCGAGCTCCCACTGCTCGCCGCCGCCGCGCAGCGCCAACCAACCACGCCCCCACCGCCGTCCCGAGCCCACCACGACCCCTGCGCCCCGCGGCTGCGCCGCCGCCAAGCTGCGCCCAACCCACGCGACCCCGCGCGCCTTCGCTCGCACTCCCCGCGCGCGCTACTCTACGACATGGCGTGCGCCCTCTGTTCGCGCCCGCTCCTTCCGCCCGCCGCCACGCGCGCGATCGCGCCCCGATCTGTCCCCATCGGCACCACCAGCCACGCCTCGCGCGCCGGCCAAGCCGCCGAAAGCGAGCCTCGTGCCGCGAGTCCACCCCTTCCTTTGTCCGCACCGCTTGCCTCGGTTCTCGGCCGCTCCGGTGTTCGTTCTAGCAACTTTTGTAAATTTAGGTTAATTTGACCTATCTCACTATTCATCGCTGCCAGTTGAACCTCGAATTCCTGTTGCTTCTTCACCATCTCGGCACCACTCGATTCGCACTCTAGAACCCTAGTCTCCATCTTGGTAGTTACCATTCCCGGATCGGTAAATGGCTCTGATACCAAAATGATAGAATCTACCACACTTTTCTATTAAAAATAAGATAAACCTCTCGAGAGAATCTCTCAAAGAGCATAATACAATAATGATAATTCGATAAATAAAGAGTAACCTAGTCCGCCTATTTATAGCCTTCCTAGGATTTAACCTAACTTTGTAAATAACTCTATTTAGGCCCATAGGCCCATTACAAACTAAATGTGCATAATAAAATATATTAAAATAGTAATTAACTCATTCTTCACTTCTTGCTTCGCCTCGAATATACTTTTAATGATGCCGGGATCGTATCACAAATATAGTAGGGTAAAATGGTTGTCTTGAGATTAGTTAAGGTCGTGTAAGTTGACACTGAAGGAAAATTTCTTTTTATAAAATTGTATGAGAGGGCAAATATAAGTCGTTTGATGAATTCATGCACGTGGAACAATTGAATGCTCAAAAATAATTTTTATATCCCATTTTTAACATGCTGCTGTAAATTGGTTACATTCTCCGATAATTATTTAATTTTGAATATTTTAGGTTAACTACTGGTGCAGTATCAAGGTTAATCCTATCTGATGACTCTCTTAGAATGGCTGTAAATGATATCAGGATATCCAAGGTACCACCAACCTATTTTTGAGAAACTATGTTGCATCTCTGCATAATTATTCCATTTTTTTTTTCATTTTTTTTATCCAGAATATTTAGTGTGCTTTCATGTTTGAAAATGTTAACTGTAGATGTCAGCTTGTTGAGAAAGCACATTGTGAGAGAACGAGTATGGTATGCCATGTGTTATATGTGGGGAATAGTAGTATATTAGTAAGGGGATAGTCCGATAGTGATAGTTAGATAGGAGTTTCTTGGTTATAAATAGGAGTATTAGGGGCCTAAAGGGCGTGGATCATTCAAACGTGTCGTTTGAAGAGTTCCGAAACCCTTCTCTCGTGTGCTCCCCTAAAGGGTGTGGTTCCTATCACTTACCCTATGAAAAGCATTGGCCTCTCCTTCCTCACCCACTTGATATATTGGCTTCTTGCCTCCAACTCACCCTCTCTCTGCTTACCAACTTTGCAAACTTCCTTTAACCGAGAGAAACTCCTCCTTAAGGCCATCACTCAAAGCTTCTCTTCCTCCATTTTGACCAAAGTTTAAGCCTTTCTAATACCTCTTTTTTCTCAACTCTGAAATCTACAAATGCATCACATTTCTAAGTCTCCATGTTTTAAAAGGCTACTTAGTCAAAGTTACCGTACTTTGACAGTGTCTTTAAAAAAAAGTGCTAGAATTAGTAACAATCATGAGGATAGGTCTTCAAGGGATGGCGCAGTAGTTGAACACTTGGGTTTTAAGGGTATGCTCTCCTCAAAGTCCCAGGTTCGAGACTCACTTGTGATATTACTCCTTCAGTGCCTGGCCTAGGGATGGACGTGGTTACCTTGTTTAGAAAAAAAAAACAATTATGAGGATAGATGGATTTGGATTTTGGAAAAGGATGAAATTTCTCTACCGGTTCATCAACTCACAAATAGGCTTCTGGGGAATGCAACCAAGAAAGTTAAGTTTTTATATGGGAATTCAGCCATGGGTGCACTGCCTAGCTAGGAGGTTCTCTCATTAGTGCCCTTTCGTATTTCTTCTTGCTCAATTTTCTCATATTTTTTTTTTGGAAACCGGGAAATCGGAGATTCGCTCCACTATACTCGGAGTAACCACGTCCATGTGTAGGATAGGTACTGGGAGATATAGAAGGAATGGAGACACGAGAGGTGTTTGCAAATTAATGTCACAAGACTGTCTCGATTTTCTCTAATTGGGAAATTACATTACTGCTAATGTAGCGTATTTTAGATATAGTATCATGAATATGTAATGAATTTTGACATTGACAGGGTATGAAGCCACTAAAGTAG

mRNA sequence

ATGCTCTGGAAATCCGCCACGATTCTCAGCCTTCCCGTTCCGACAGCCAGCACCGGCAGATTGGGAAGGTTTTGTTGTACATTCCGGCATCAGAAATTCGACCGCCCTTTCTTCTTCTTCTTCAACTCGTTGCGTTCCAATTGCAGCTCCGGTGGTGCAAATTCAGCCCAAAATGGGAAAGAGTATATGGTTTTGTCCGACGACGAGCTCATGAAACAGTGCGAGTTGAGCACGTTTAAGTCCTCCGGTCCCGGTGGCCAGCATCGCAACAAGCGCGAATCCGCTGTCCGATTGAAGCACATTCCCACTGGTATCATTGCTCAGGCTGTCGAGGATCGATCGCAGCATATGAATCGAGCAAGTGCTTTGGCTCGCCTTCGTGCTCTCTTGGCCCTGAAAGTCAGGAACCCTGTGGATCTTGAAGATTATTCACCTCCTCCTGAGCTTCTCCAAATTCTCCCTTTGAAGTCCACTATCAGGCCGCGGGAATGTGGCCCTCAAATTGGTCCTAAAAATTCTAAATTTCTTCCGGGGATGCAAGCTCTATTGGATCTAATTTCCACACTTGACGGTTCTATATCAGACACAGCTAAGATTTTGGGGTTAACTACTGGTGCAGTATCAAGGTTAATCCTATCTGATGACTCTCTTAGAATGGCTGTAAATGATATCAGGATATCCAAGGGTATGAAGCCACTAAAGTAG

Coding sequence (CDS)

ATGCTCTGGAAATCCGCCACGATTCTCAGCCTTCCCGTTCCGACAGCCAGCACCGGCAGATTGGGAAGGTTTTGTTGTACATTCCGGCATCAGAAATTCGACCGCCCTTTCTTCTTCTTCTTCAACTCGTTGCGTTCCAATTGCAGCTCCGGTGGTGCAAATTCAGCCCAAAATGGGAAAGAGTATATGGTTTTGTCCGACGACGAGCTCATGAAACAGTGCGAGTTGAGCACGTTTAAGTCCTCCGGTCCCGGTGGCCAGCATCGCAACAAGCGCGAATCCGCTGTCCGATTGAAGCACATTCCCACTGGTATCATTGCTCAGGCTGTCGAGGATCGATCGCAGCATATGAATCGAGCAAGTGCTTTGGCTCGCCTTCGTGCTCTCTTGGCCCTGAAAGTCAGGAACCCTGTGGATCTTGAAGATTATTCACCTCCTCCTGAGCTTCTCCAAATTCTCCCTTTGAAGTCCACTATCAGGCCGCGGGAATGTGGCCCTCAAATTGGTCCTAAAAATTCTAAATTTCTTCCGGGGATGCAAGCTCTATTGGATCTAATTTCCACACTTGACGGTTCTATATCAGACACAGCTAAGATTTTGGGGTTAACTACTGGTGCAGTATCAAGGTTAATCCTATCTGATGACTCTCTTAGAATGGCTGTAAATGATATCAGGATATCCAAGGGTATGAAGCCACTAAAGTAG

Protein sequence

MLWKSATILSLPVPTASTGRLGRFCCTFRHQKFDRPFFFFFNSLRSNCSSGGANSAQNGKEYMVLSDDELMKQCELSTFKSSGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRSQHMNRASALARLRALLALKVRNPVDLEDYSPPPELLQILPLKSTIRPRECGPQIGPKNSKFLPGMQALLDLISTLDGSISDTAKILGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK

Homology

[Close]

BLAST of Sed0003038 vs. NCBI nr
Match: XP_023523846.1 (uncharacterized protein LOC111787964 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 382.5 bits (981), Expect = 2.6e-102
Identity = 198/234 (84.62%), Postives = 207/234 (88.46%), Query Frame = 0


Query: 1   MLWKSATILSLPVPTASTGRLGRFCCTFRHQKFDRPFFFFFNSLRSNCSSGGANSAQNGK 60
           MLWKSA ILS+PVP AS GR GR  CTFR  +F+    FF NSLRSNCSS  ANS   GK
Sbjct: 6   MLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGS--FFSNSLRSNCSSSSANSVWKGK 65

Query: 61  EYMVLSDDELMKQCELSTFKSSGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRSQHMNRA 120
           EY+VLSD+ELM+QCE+ TFK+SGPGGQHRNKRESAVRLKHIPTGI AQAVEDRSQH NRA
Sbjct: 66  EYLVLSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRA 125

Query: 121 SALARLRALLALKVRNPVDLEDYSPPPELLQILPLKSTIRPRECGPQIGPKNSKFLPGMQ 180
           SALARLRA LALKVRNPVDLEDYSPPPELLQILPLKSTIRP  CGPQIGP NSKFLPGMQ
Sbjct: 126 SALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQ 185

Query: 181 ALLDLISTLDGSISDTAKILGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK 235
           ALLDLI TLDGSISDTAK +GLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK
Sbjct: 186 ALLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK 237

[Close]

BLAST of Sed0003038 vs. NCBI nr
Match: XP_038891024.1 (peptide chain release factor 1 [Benincasa hispida])

HSP 1 Score: 382.1 bits (980), Expect = 3.4e-102
Identity = 197/234 (84.19%), Postives = 207/234 (88.46%), Query Frame = 0


Query: 1   MLWKSATILSLPVPTASTGRLGRFCCTFRHQKFDRPFFFFFNSLRSNCSSGGANSAQNGK 60
           ML  SA IL  P+P AS GR  RF CTF H  F+    FFFNSL SNCSS  ANS  NGK
Sbjct: 6   MLCNSAKILGFPLPIASKGRWARFGCTFWHHPFEGS--FFFNSLHSNCSSTTANSVWNGK 65

Query: 61  EYMVLSDDELMKQCELSTFKSSGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRSQHMNRA 120
           EY+VLSD+ELMKQCE+ TFK+SGPGGQHRNKRESAVRLKHIPTGI AQAVEDRSQH NRA
Sbjct: 66  EYLVLSDEELMKQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRA 125

Query: 121 SALARLRALLALKVRNPVDLEDYSPPPELLQILPLKSTIRPRECGPQIGPKNSKFLPGMQ 180
           SALARLRA LALKVRNPVDLEDYSPPPELLQILPLKSTIRP ECGPQIGPKNSKFLPGMQ
Sbjct: 126 SALARLRAFLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPECGPQIGPKNSKFLPGMQ 185

Query: 181 ALLDLISTLDGSISDTAKILGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK 235
           ALLDLISTLDGS+SDTAK+LGLTTGA+SRLILSDD+LRMAVNDIRISKGMKPLK
Sbjct: 186 ALLDLISTLDGSVSDTAKLLGLTTGALSRLILSDDALRMAVNDIRISKGMKPLK 237

[Close]

BLAST of Sed0003038 vs. NCBI nr
Match: KAG6607552.1 (hypothetical protein SDJN03_00894, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037191.1 prfB [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 381.7 bits (979), Expect = 4.5e-102
Identity = 197/234 (84.19%), Postives = 207/234 (88.46%), Query Frame = 0


Query: 1   MLWKSATILSLPVPTASTGRLGRFCCTFRHQKFDRPFFFFFNSLRSNCSSGGANSAQNGK 60
           MLWKSA ILS+PVP AS GR GR  CTFR  +F+    FF NSLRSNCSS  ANS   GK
Sbjct: 6   MLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGS--FFSNSLRSNCSSSSANSIWKGK 65

Query: 61  EYMVLSDDELMKQCELSTFKSSGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRSQHMNRA 120
           EY++LSD+ELM+QCE+ TFK+SGPGGQHRNKRESAVRLKHIPTGI AQAVEDRSQH NRA
Sbjct: 66  EYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRA 125

Query: 121 SALARLRALLALKVRNPVDLEDYSPPPELLQILPLKSTIRPRECGPQIGPKNSKFLPGMQ 180
           SALARLRA LALKVRNPVDLEDYSPPPELLQILPLKSTIRP  CGPQIGP NSKFLPGMQ
Sbjct: 126 SALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQ 185

Query: 181 ALLDLISTLDGSISDTAKILGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK 235
           ALLDLI TLDGSISDTAK +GLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK
Sbjct: 186 ALLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK 237

[Close]

BLAST of Sed0003038 vs. NCBI nr
Match: XP_022932469.1 (uncharacterized protein LOC111438876 [Cucurbita moschata])

HSP 1 Score: 379.8 bits (974), Expect = 1.7e-101
Identity = 196/234 (83.76%), Postives = 206/234 (88.03%), Query Frame = 0


Query: 1   MLWKSATILSLPVPTASTGRLGRFCCTFRHQKFDRPFFFFFNSLRSNCSSGGANSAQNGK 60
           MLWKSA ILS+PVP AS GR GR  CTFR  +F+    FF NSLRS CSS  ANS   GK
Sbjct: 6   MLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGS--FFSNSLRSTCSSSSANSVWKGK 65

Query: 61  EYMVLSDDELMKQCELSTFKSSGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRSQHMNRA 120
           EY++LSD+ELM+QCE+ TFK+SGPGGQHRNKRESAVRLKHIPTGI AQAVEDRSQH NRA
Sbjct: 66  EYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRA 125

Query: 121 SALARLRALLALKVRNPVDLEDYSPPPELLQILPLKSTIRPRECGPQIGPKNSKFLPGMQ 180
           SALARLRA LALKVRNPVDLEDYSPPPELLQILPLKSTIRP  CGPQIGP NSKFLPGMQ
Sbjct: 126 SALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQ 185

Query: 181 ALLDLISTLDGSISDTAKILGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK 235
           ALLDLI TLDGSISDTAK +GLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK
Sbjct: 186 ALLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK 237

[Close]

BLAST of Sed0003038 vs. NCBI nr
Match: XP_004141513.1 (uncharacterized protein LOC101217430 isoform X1 [Cucumis sativus] >KGN52594.1 hypothetical protein Csa_007986 [Cucumis sativus])

HSP 1 Score: 377.1 bits (967), Expect = 1.1e-100
Identity = 194/236 (82.20%), Postives = 209/236 (88.56%), Query Frame = 0


Query: 1   MLWKSATILSLPVPTASTGRLGRFCCTF--RHQKFDRPFFFFFNSLRSNCSSGGANSAQN 60
           MLW SA IL  P P AS  R  RF  TF  RH+ F+   FFFFNSLR NCSS  ANS  N
Sbjct: 6   MLWSSAKILGFPSPIASNVRWARFDYTFRLRHRPFEGS-FFFFNSLRFNCSSSNANSVCN 65

Query: 61  GKEYMVLSDDELMKQCELSTFKSSGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRSQHMN 120
           GK+Y+VLSD+ELMKQCE+ TFK+SGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRSQH N
Sbjct: 66  GKQYLVLSDEELMKQCEMGTFKASGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRSQHKN 125

Query: 121 RASALARLRALLALKVRNPVDLEDYSPPPELLQILPLKSTIRPRECGPQIGPKNSKFLPG 180
           R+SALARLRALLALKVRNPVDLEDYSPPPELLQILPLKST+RP ECGPQIGP NSKFLPG
Sbjct: 126 RSSALARLRALLALKVRNPVDLEDYSPPPELLQILPLKSTVRPPECGPQIGPNNSKFLPG 185

Query: 181 MQALLDLISTLDGSISDTAKILGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK 235
           MQALLDLISTLDGS+SDTAK+LGLTTGA+SRLILSDD+LRMAVNDIR+SKG+KPLK
Sbjct: 186 MQALLDLISTLDGSVSDTAKLLGLTTGALSRLILSDDALRMAVNDIRMSKGLKPLK 240

[Close]

BLAST of Sed0003038 vs. ExPASy Swiss-Prot
Match: B1XYX1 (Peptide chain release factor 1 OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) OX=395495 GN=prfA PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.0e-11
Identity = 35/78 (44.87%), Postives = 52/78 (66.67%), Query Frame = 0


Query: 73  QCELSTFKSSGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRSQHMNRASALARLRALLAL 132
           +  + T+++SG GGQH NK +SAVR+ H+PTG++A+  +DRSQH N+A ALA L A L  
Sbjct: 221 ELRIDTYRASGAGGQHINKTDSAVRVTHLPTGLVAECQDDRSQHRNKARALAVLAARLRD 280

Query: 133 KVRNPVDLEDYSPPPELL 151
           +VR     +D +    L+
Sbjct: 281 RVRQEQAAKDAAARKSLI 298

[Close]

BLAST of Sed0003038 vs. ExPASy Swiss-Prot
Match: A7ZE19 (Peptide chain release factor 2 OS=Campylobacter concisus (strain 13826) OX=360104 GN=prfB PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.0e-11
Identity = 32/59 (54.24%), Postives = 44/59 (74.58%), Query Frame = 0


Query: 72  KQCELSTFKSSGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRSQHMNRASALARLRALL 131
           K  ++ T+++SG GGQH NK ESA+R+ HIPTGI+ Q   DRSQH NRA+A+  L++ L
Sbjct: 236 KDLKIDTYRASGAGGQHVNKTESAIRITHIPTGIVVQCQNDRSQHKNRATAMKMLKSRL 294

[Close]

BLAST of Sed0003038 vs. ExPASy Swiss-Prot
Match: A5WFG1 (Peptide chain release factor 1 OS=Psychrobacter sp. (strain PRwf-1) OX=349106 GN=prfA PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.7e-11
Identity = 36/68 (52.94%), Postives = 47/68 (69.12%), Query Frame = 0


Query: 76  LSTFKSSGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRSQHMNRASALARLRA-LLALKV 135
           + TF+SSG GGQH N  +SAVRL HIPTG++A+  ++RSQH NRA A+  L A +   KV
Sbjct: 227 MDTFRSSGAGGQHVNTTDSAVRLTHIPTGVVAECQQERSQHKNRAKAMQMLIARIQQAKV 286

Query: 136 RNPVDLED 143
           +  VD  D
Sbjct: 287 QEQVDTAD 294

[Close]

BLAST of Sed0003038 vs. ExPASy Swiss-Prot
Match: Q12F86 (Peptide chain release factor 1 OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) OX=296591 GN=prfA PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.9e-11
Identity = 33/61 (54.10%), Postives = 45/61 (73.77%), Query Frame = 0


Query: 76  LSTFKSSGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRSQHMNRASALARLRALLALKVR 135
           + T+++SG GGQH NK +SAVR+ HIPTGI+A+  +DRSQH N+A AL  L A +  K R
Sbjct: 234 IDTYRASGAGGQHINKTDSAVRITHIPTGIVAECQDDRSQHRNKAKALQVLSARIVEKDR 293

Query: 136 N 137
           +
Sbjct: 294 S 294

[Close]

BLAST of Sed0003038 vs. ExPASy Swiss-Prot
Match: Q7MAP4 (Peptide chain release factor 2 OS=Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W) OX=273121 GN=prfB PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.9e-11
Identity = 32/59 (54.24%), Postives = 42/59 (71.19%), Query Frame = 0


Query: 72  KQCELSTFKSSGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRSQHMNRASALARLRALL 131
           K   L T+++SG GGQH NK ESA+R+ HIPTGI+ Q   DRSQH N+A+A   L++ L
Sbjct: 236 KDLRLDTYRASGAGGQHVNKTESAIRITHIPTGIVVQCQNDRSQHKNKATAFKMLKSRL 294

[Close]

BLAST of Sed0003038 vs. ExPASy TrEMBL
Match: A0A6J1EX22 (uncharacterized protein LOC111438876 OS=Cucurbita moschata OX=3662 GN=LOC111438876 PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 8.3e-102
Identity = 196/234 (83.76%), Postives = 206/234 (88.03%), Query Frame = 0


Query: 1   MLWKSATILSLPVPTASTGRLGRFCCTFRHQKFDRPFFFFFNSLRSNCSSGGANSAQNGK 60
           MLWKSA ILS+PVP AS GR GR  CTFR  +F+    FF NSLRS CSS  ANS   GK
Sbjct: 6   MLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGS--FFSNSLRSTCSSSSANSVWKGK 65

Query: 61  EYMVLSDDELMKQCELSTFKSSGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRSQHMNRA 120
           EY++LSD+ELM+QCE+ TFK+SGPGGQHRNKRESAVRLKHIPTGI AQAVEDRSQH NRA
Sbjct: 66  EYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRA 125

Query: 121 SALARLRALLALKVRNPVDLEDYSPPPELLQILPLKSTIRPRECGPQIGPKNSKFLPGMQ 180
           SALARLRA LALKVRNPVDLEDYSPPPELLQILPLKSTIRP  CGPQIGP NSKFLPGMQ
Sbjct: 126 SALARLRAQLALKVRNPVDLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQ 185

Query: 181 ALLDLISTLDGSISDTAKILGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK 235
           ALLDLI TLDGSISDTAK +GLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK
Sbjct: 186 ALLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK 237

[Close]

BLAST of Sed0003038 vs. ExPASy TrEMBL
Match: A0A0A0KUM8 (RF_PROK_I domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G646680 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 5.4e-101
Identity = 194/236 (82.20%), Postives = 209/236 (88.56%), Query Frame = 0


Query: 1   MLWKSATILSLPVPTASTGRLGRFCCTF--RHQKFDRPFFFFFNSLRSNCSSGGANSAQN 60
           MLW SA IL  P P AS  R  RF  TF  RH+ F+   FFFFNSLR NCSS  ANS  N
Sbjct: 6   MLWSSAKILGFPSPIASNVRWARFDYTFRLRHRPFEGS-FFFFNSLRFNCSSSNANSVCN 65

Query: 61  GKEYMVLSDDELMKQCELSTFKSSGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRSQHMN 120
           GK+Y+VLSD+ELMKQCE+ TFK+SGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRSQH N
Sbjct: 66  GKQYLVLSDEELMKQCEMGTFKASGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRSQHKN 125

Query: 121 RASALARLRALLALKVRNPVDLEDYSPPPELLQILPLKSTIRPRECGPQIGPKNSKFLPG 180
           R+SALARLRALLALKVRNPVDLEDYSPPPELLQILPLKST+RP ECGPQIGP NSKFLPG
Sbjct: 126 RSSALARLRALLALKVRNPVDLEDYSPPPELLQILPLKSTVRPPECGPQIGPNNSKFLPG 185

Query: 181 MQALLDLISTLDGSISDTAKILGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK 235
           MQALLDLISTLDGS+SDTAK+LGLTTGA+SRLILSDD+LRMAVNDIR+SKG+KPLK
Sbjct: 186 MQALLDLISTLDGSVSDTAKLLGLTTGALSRLILSDDALRMAVNDIRMSKGLKPLK 240

[Close]

BLAST of Sed0003038 vs. ExPASy TrEMBL
Match: A0A6J1I8P1 (uncharacterized protein LOC111471993 OS=Cucurbita maxima OX=3661 GN=LOC111471993 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.6e-100
Identity = 194/234 (82.91%), Postives = 206/234 (88.03%), Query Frame = 0


Query: 1   MLWKSATILSLPVPTASTGRLGRFCCTFRHQKFDRPFFFFFNSLRSNCSSGGANSAQNGK 60
           MLWKSA ILS+PVP AS GR GR  CTFR  +F+    FF NSLRSNCSS  A S   GK
Sbjct: 6   MLWKSAKILSIPVPIASNGRWGRIGCTFRIHQFEGS--FFSNSLRSNCSSSSAISVWKGK 65

Query: 61  EYMVLSDDELMKQCELSTFKSSGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRSQHMNRA 120
           EY++LSD+ELM+QCE+ TFK+SGPGGQHRNKRESAVRLKHIPTGI AQAVEDRSQH NRA
Sbjct: 66  EYLILSDEELMRQCEMDTFKASGPGGQHRNKRESAVRLKHIPTGITAQAVEDRSQHKNRA 125

Query: 121 SALARLRALLALKVRNPVDLEDYSPPPELLQILPLKSTIRPRECGPQIGPKNSKFLPGMQ 180
           SALARLRA LALKVRNPV+LEDYSPPPELLQILPLKSTIRP  CGPQIGP NSKFLPGMQ
Sbjct: 126 SALARLRAQLALKVRNPVNLEDYSPPPELLQILPLKSTIRPPGCGPQIGPNNSKFLPGMQ 185

Query: 181 ALLDLISTLDGSISDTAKILGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK 235
           +LLDLI TLDGSISDTAK +GLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK
Sbjct: 186 SLLDLIYTLDGSISDTAKYIGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK 237

[Close]

BLAST of Sed0003038 vs. ExPASy TrEMBL
Match: A0A5A7T8S5 (Peptide chain release factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001580 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 1.0e-99
Identity = 193/236 (81.78%), Postives = 206/236 (87.29%), Query Frame = 0


Query: 1   MLWKSATILSLPVPTASTGRLGRF--CCTFRHQKFDRPFFFFFNSLRSNCSSGGANSAQN 60
           MLW SA IL  P P AS  R  RF     FRH  F+   FFFFNSLR NCSS  ANS  +
Sbjct: 6   MLWNSAKILGFPAPIASNVRWARFGYKFRFRHHPFEGS-FFFFNSLRFNCSSSNANSVCS 65

Query: 61  GKEYMVLSDDELMKQCELSTFKSSGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRSQHMN 120
           GKEY+VLSD+ELMKQCE+ TFK+SGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRSQH N
Sbjct: 66  GKEYLVLSDEELMKQCEMGTFKASGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRSQHKN 125

Query: 121 RASALARLRALLALKVRNPVDLEDYSPPPELLQILPLKSTIRPRECGPQIGPKNSKFLPG 180
           R+SALARLRALLALKVRNPVDLEDYSPPPELLQILP KST+RP ECGPQIGP NSKFLPG
Sbjct: 126 RSSALARLRALLALKVRNPVDLEDYSPPPELLQILPPKSTVRPPECGPQIGPNNSKFLPG 185

Query: 181 MQALLDLISTLDGSISDTAKILGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK 235
           MQALLDLISTLDGS+SDTAK+LGLTTGA+SRLILSDD+LRMAVNDIR+SKGMKPLK
Sbjct: 186 MQALLDLISTLDGSVSDTAKLLGLTTGALSRLILSDDALRMAVNDIRMSKGMKPLK 240

[Close]

BLAST of Sed0003038 vs. ExPASy TrEMBL
Match: A0A1S3CAA2 (uncharacterized protein LOC103498609 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498609 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 1.0e-99
Identity = 193/236 (81.78%), Postives = 206/236 (87.29%), Query Frame = 0


Query: 1   MLWKSATILSLPVPTASTGRLGRF--CCTFRHQKFDRPFFFFFNSLRSNCSSGGANSAQN 60
           MLW SA IL  P P AS  R  RF     FRH  F+   FFFFNSLR NCSS  ANS  +
Sbjct: 6   MLWNSAKILGFPAPIASNVRWARFGYKFRFRHHPFEGS-FFFFNSLRFNCSSSNANSVCS 65

Query: 61  GKEYMVLSDDELMKQCELSTFKSSGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRSQHMN 120
           GKEY+VLSD+ELMKQCE+ TFK+SGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRSQH N
Sbjct: 66  GKEYLVLSDEELMKQCEMGTFKASGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRSQHKN 125

Query: 121 RASALARLRALLALKVRNPVDLEDYSPPPELLQILPLKSTIRPRECGPQIGPKNSKFLPG 180
           R+SALARLRALLALKVRNPVDLEDYSPPPELLQILP KST+RP ECGPQIGP NSKFLPG
Sbjct: 126 RSSALARLRALLALKVRNPVDLEDYSPPPELLQILPPKSTVRPPECGPQIGPNNSKFLPG 185

Query: 181 MQALLDLISTLDGSISDTAKILGLTTGAVSRLILSDDSLRMAVNDIRISKGMKPLK 235
           MQALLDLISTLDGS+SDTAK+LGLTTGA+SRLILSDD+LRMAVNDIR+SKGMKPLK
Sbjct: 186 MQALLDLISTLDGSVSDTAKLLGLTTGALSRLILSDDALRMAVNDIRMSKGMKPLK 240

[Close]

BLAST of Sed0003038 vs. TAIR 10
Match: AT1G33330.1 (Class I peptide chain release factor )

HSP 1 Score: 254.6 bits (649), Expect = 7.7e-68
Identity = 144/247 (58.30%), Postives = 168/247 (68.02%), Query Frame = 0


Query: 1   MLWKSATILSLPVPT-------ASTGRLGRFCCTFRHQKFDRPFFFFFNSLRSNCSSGGA 60
           +L +S  +LS P           S G   R C   R+   D       N   S    G  
Sbjct: 17  LLRRSIPLLSAPTSVIYNHRTLLSDGLSTRLCSILRYSSSDG-----VNGGSSGGDFGND 76

Query: 61  N------SAQNGKEYMVLSDDELMKQCELSTFKSSGPGGQHRNKRESAVRLKHIPTGIIA 120
           N      S      Y+  +D+ELMKQC L TF+ SGPGGQHRNKR+SAVRLKH+PTGI+A
Sbjct: 77  NDSVSVVSDVQSPNYLKFTDEELMKQCRLETFRVSGPGGQHRNKRDSAVRLKHLPTGIVA 136

Query: 121 QAVEDRSQHMNRASALARLRALLALKVRNPVDLEDYSPPPELLQILPLKSTIRPRECGPQ 180
           QAVEDRSQH NRASAL RLR LLA+KVRN VD+E Y+PPPELLQILP KSTIR    G Q
Sbjct: 137 QAVEDRSQHKNRASALNRLRTLLAIKVRNKVDIEAYAPPPELLQILPPKSTIR-TSSGSQ 196

Query: 181 IGPKNSKFLPGMQALLDLISTLDGSISDTAKILGLTTGAVSRLILSDDSLRMAVNDIRIS 235
           IGP N KF+PGMQALLD+IS  DGSI+D+AK+LGL+TG +SRLILS D LRMAVN +R +
Sbjct: 197 IGPNNPKFVPGMQALLDVISASDGSIADSAKLLGLSTGGLSRLILSHDGLRMAVNSMRAA 256

[Close]

BLAST of Sed0003038 vs. TAIR 10
Match: AT1G56350.1 (Peptide chain release factor 2 )

HSP 1 Score: 64.3 bits (155), Expect = 1.5e-10
Identity = 33/73 (45.21%), Postives = 47/73 (64.38%), Query Frame = 0


Query: 58  NGKEYMVLSDDELMKQCELSTFKSSGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRSQHM 117
           +G   + ++D +L     +  F+S G GGQH N  +SAVR+ HIPTGI A    +RSQH 
Sbjct: 336 DGSTRVEINDSDL----RIERFRSGGAGGQHANTTDSAVRIVHIPTGITATCQNERSQHS 395

Query: 118 NRASALARLRALL 131
           N+ASA+A L++ L
Sbjct: 396 NKASAMAVLQSRL 404

[Close]

BLAST of Sed0003038 vs. TAIR 10
Match: AT2G47020.1 (Peptide chain release factor 1 )

HSP 1 Score: 62.0 bits (149), Expect = 7.3e-10
Identity = 30/65 (46.15%), Postives = 44/65 (67.69%), Query Frame = 0


Query: 76  LSTFKSSGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRSQHMNRASAL----ARLRALLA 135
           + T++S G GGQH N   SAVR+ H+PTG++    ++RSQHMNRA AL    ARL  +  
Sbjct: 276 IDTYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMNRAKALKVLCARLYEIER 335

Query: 136 LKVRN 137
           L++++
Sbjct: 336 LRIQS 340

[Close]

BLAST of Sed0003038 vs. TAIR 10
Match: AT5G36170.1 (high chlorophyll fluorescent 109 )

HSP 1 Score: 58.9 bits (141), Expect = 6.2e-09
Identity = 34/88 (38.64%), Postives = 52/88 (59.09%), Query Frame = 0


Query: 49  SSGGANSAQNGKEYMVLSDDELM------KQCELSTFKSSGPGGQHRNKRESAVRLKHIP 108
           S G   ++ +G E M L  +E +      +  ++S  ++ G GGQ+ NK E+AVR+ HIP
Sbjct: 288 SKGLRQTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAGGKGGQNVNKVETAVRITHIP 347

Query: 109 TGIIAQAVEDRSQHMNRASALARLRALL 131
           TG+  +  E+RSQ  N+  AL RL+A L
Sbjct: 348 TGVAVRCTEERSQLANKTRALIRLKAKL 375

[Close]

BLAST of Sed0003038 vs. TAIR 10
Match: AT5G36170.2 (high chlorophyll fluorescent 109 )

HSP 1 Score: 58.9 bits (141), Expect = 6.2e-09
Identity = 34/88 (38.64%), Postives = 52/88 (59.09%), Query Frame = 0


Query: 49  SSGGANSAQNGKEYMVLSDDELM------KQCELSTFKSSGPGGQHRNKRESAVRLKHIP 108
           S G   ++ +G E M L  +E +      +  ++S  ++ G GGQ+ NK E+AVR+ HIP
Sbjct: 287 SKGLRQTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAGGKGGQNVNKVETAVRITHIP 346

Query: 109 TGIIAQAVEDRSQHMNRASALARLRALL 131
           TG+  +  E+RSQ  N+  AL RL+A L
Sbjct: 347 TGVAVRCTEERSQLANKTRALIRLKAKL 374

The following BLAST results are available for this feature:

BLAST of Sed0003038 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023523846.1	2.6e-102	84.62	uncharacterized protein LOC111787964 [Cucurbita pepo subsp. pepo]	[more]
XP_038891024.1	3.4e-102	84.19	peptide chain release factor 1 [Benincasa hispida]	[more]
KAG6607552.1	4.5e-102	84.19	hypothetical protein SDJN03_00894, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022932469.1	1.7e-101	83.76	uncharacterized protein LOC111438876 [Cucurbita moschata]	[more]
XP_004141513.1	1.1e-100	82.20	uncharacterized protein LOC101217430 isoform X1 [Cucumis sativus] >KGN52594.1 hy...	[more]

BLAST of Sed0003038 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B1XYX1	1.0e-11	44.87	Peptide chain release factor 1 OS=Leptothrix cholodnii (strain ATCC 51168 / LMG ...	[more]
A7ZE19	1.0e-11	54.24	Peptide chain release factor 2 OS=Campylobacter concisus (strain 13826) OX=36010...	[more]
A5WFG1	1.7e-11	52.94	Peptide chain release factor 1 OS=Psychrobacter sp. (strain PRwf-1) OX=349106 GN...	[more]
Q12F86	2.9e-11	54.10	Peptide chain release factor 1 OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) ...	[more]
Q7MAP4	2.9e-11	54.24	Peptide chain release factor 2 OS=Wolinella succinogenes (strain ATCC 29543 / DS...	[more]

BLAST of Sed0003038 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EX22	8.3e-102	83.76	uncharacterized protein LOC111438876 OS=Cucurbita moschata OX=3662 GN=LOC1114388...	[more]
A0A0A0KUM8	5.4e-101	82.20	RF_PROK_I domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G646680 P...	[more]
A0A6J1I8P1	1.6e-100	82.91	uncharacterized protein LOC111471993 OS=Cucurbita maxima OX=3661 GN=LOC111471993...	[more]
A0A5A7T8S5	1.0e-99	81.78	Peptide chain release factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3CAA2	1.0e-99	81.78	uncharacterized protein LOC103498609 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Sed0003038 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G33330.1	7.7e-68	58.30	Class I peptide chain release factor	[more]
AT1G56350.1	1.5e-10	45.21	Peptide chain release factor 2	[more]
AT2G47020.1	7.3e-10	46.15	Peptide chain release factor 1	[more]
AT5G36170.1	6.2e-09	38.64	high chlorophyll fluorescent 109	[more]
AT5G36170.2	6.2e-09	38.64	high chlorophyll fluorescent 109	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.20		coord: 45..137 e-value: 1.4E-25 score: 91.1
None	No IPR available	PANTHER	PTHR43804	LD18447P	coord: 39..231
None	No IPR available	PANTHER	PTHR43804:SF6	CLASS I PEPTIDE CHAIN RELEASE FACTOR	coord: 39..231
None	No IPR available	SUPERFAMILY	75620	Release factor	coord: 72..132
IPR000352	Peptide chain release factor class I	PFAM	PF00472	RF-1	coord: 72..131 e-value: 5.7E-20 score: 71.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003038.1	Sed0003038.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006415	translational termination
molecular_function	GO:0003747	translation release factor activity