Sed0003020 (gene) Chayote v1

Overview


Name	Sed0003020
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Polyketide_cyc domain-containing protein
Location	LG13: 22444419 .. 22448267 (-)
RNA-Seq Expression	Sed0003020
Synteny	Sed0003020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTTCAATATCTCTCTCCACTGGCCCCGCTTCTCTCTCTTTCGCCATTGCAAATCTGGTGATAATTTTTTCATCTTCTTCGGTTTTTTCATGGAGCTTTTGCCTCGGAATTTGGCGAATCTCAAGCACAGAGAAACTCGTAACGACTCACTGTTCGTCTCTGAATTGGCCATGGACGACGAGTCAACCGAGTTTTCCCTCCCGGTCGTCGACGATTCTTCTAGCCAGGTACTTTTCCTCTTCGATTTTGCATGTTCTTGTTAGGTTTTTGATTCTGTGATGTTTTGCATCTTTCGATTCCTGTGTCTGCACTGTTTTCTCTATTTTCGTGTTGAGATTGAGTAGAATGATGTGAATTTAATAGTTCGAGGAAATAGGAAGTGGAAGAAGATTGTACTGATCTCGCACTCGACTTTCGAGACTAGATTTGTGGATATTTGTTTTGTATTTTGTTTGCCTCTGTTTGGATCGATCTTGCTGAATTTGTAGGCCTGTGGTTATGTGCCTAATTTTTCTGGAAATTCACCACGAGTTTTGATTGTTCGATTTCGAGAATCGCAAGTTGCTTTCTGTGATGTTTTGTATCTTTCGATTCCTTTGTCTGCACTGTTTCTCTATTCTTGTATTGAAACTTATAAGTAGAATGTTATCGATTCAATAATTGAAGGAAATAGGAAGTTGAAGAAGACAGTACTGGTTTCGCACTTGAATTTTGGGACTAGATATGTGGCTAAATTATTTAGTATTTTGTTTGGCTCTATTTGGATCGATCTTGCTCTCTGTTGATGGAATTTTCAGGGATGTTTAGGCCCTTGGATTTGTGGCCAATTATTCTGGAAATTCACCACGAGTTTTGATTGTTCGATTTCCAGACACACAAGTTGCTTTCTGTGATGTTTCGTATCTTTCGATTCATGTGTCTGTACTGTTTCTTTATTCTTGTGTTGAAACTTATAAGTAGAAATATAACGATTCAATAATTGAAGGAAATCGGAAATGGAAGAATACAGTACCGGTCTCGCACTCGATTTTTGAGACTAGATATGTGGCTAATTATTTTGTATTTTGTTTGGGCTCTATTTGGATCGATCTTGCTTGTAGGGCGGTGTAAGGGGATTGGATATAATGGCTAATTATTCTGGAAATTCACCACGAGTTTTGATTGTTCGATTTCATGATTTATCATATTTCAGCACGGAATTGCTGATAATCCGGTTTCGATTTTAGGGCACTCATATGGCGGAGTCTGTACCTTCTGATTGGACCGATGAGAAGCATCATCTGTTCCTTGAATCCATGGAGGCGTCTTTTATAAACCAGATGTTTGATTCTTCGCATTCAGTTAGTACCTGCTCCGGCAAAGAACATTCATCGCGCACAAAATTGCACGGCCAAAGCCAGGCTGGCTCTCATGTTCATTCACATTTTGGCCAGGTTTAGTGTTGATTGATCTCTTTTGACGAGTTACAACTTACAACTCTATTCTGTTTATTGTGCCTTGTTAATACTCTTTTTGTGTATACAGTTTAAGGTTCTTCGACGAGGAAGCTGGAAGAATATTAATTTCGAACCAACTGAATCTCGGCCAAATTTATTGAAGGATTATCAAGCTCTCTCGCATAATCCATGGATACATCACTTCAGAGCTACTCGTAGAAACAAGGATGTTGCATGTAAAAGTCAAGCTACCAGTTCAAGAGGAAGGAATTTGTTGCCACTCCGAGCAGCCAATAATTCAGAACCTATGCGTGCTTCTAATACTGATTTGTGTCAGCAATATATCAACGACAATAAAGGTAAATTTTGAGCCTTGGACTTTATACATTAATGCTTATAATTCAGAATTTATGCGTGTTTCTTACTCTGATTTATCTCAGCAATATATCAACGACAATAAAGGTAGATTTTGAGCCTTGGGAGGTGTTTGGATGAGGTTTTGGATAAGTAGTTATTTTGAGTAGTAAGAAATTGAGAGTTGCAGCCAAATACTCGTTTAGATGTGGTTTTTATGTAGAGGAGTAAGAAAAAATAGCTTGTTTGGATGTGAATTTGAAATGAGTAGTTATATTTTAGTAGTTAAAAAATAATAATTAAAAATGAGTAGTTAAGAATGAGTTATTTTGAATAGTTGGAAATGAATGATTAGAAATGAAGAGTTATTTTGAGTAGTTAGAAATGAATTATTAGAAATGAGTGGTTAAAAATGGGGAGTTATTTTTAATAGTAAAAATGCGGAGTTGTTTTGAGTAGTTACCAAAATTCGTTTGGATGTACTTTTTTGAAGAGTAGTTAGTAAATACTCATTTTAAATCCTCCATAAATTCAACAAACAAACACCTCCTTGGACTTCATATATTTATCAATATTTGATCGTTAAATTCGAGTAGCTTACATGTACCTCAATTATTTTCACGTGACAACACGCTTGACTTTAGACATTTGGATGTCAAGGAAATCCTTAGGAAATTAGTTCTTAGGTAAGTGAGCACCATGAATTGAACTCGTAACCTTTCAATTCTTCAAGTCTTCTTGATCACTAGTCAACCATGTGTTGAGAATTTGGCAAAATATTAACAAAGTTTGTCCCACATGGAAAGTTTTTGGCGAAATATGGGGAAAATTGTTCTGAAAAGATGCAAGAATGTGGTGTGCTCCCCTCACTATAAATGGGGCAAATGGGCTTGGATTCAAGGCATCCCAATTAGAAATACTTTAAGCATGTGTACTAACTCTTTTGTATACGAAAGTTGAGCAAAAATTGTGACTAGTATAAAATTTGAAGAGTGGTTTTTGTAATTGGGGTCGGGGAGAGAATTCTTTGTAATTATAACAATTTTTCACATAGAAGTTCTTTCTGTCCGTTGTTTTTCTTCAATTTGGGAGTTTTTCCACGTAAATTCTTGTGTTGTTCTTTTTGTTGTTCCCTTTAATTTCTTTCTTGCTTATTCCTGCGGTAATAGGGGTGTTTTTCTGTTTCCTTTAATTTATTTCTTGTTCTTTTTGCTGTTTCCTATACTACCAGAAGTTCTGAGTCGAAAAAATTGATGTAATCGCGAAGTGAAACTGATTTTTATTTTAACCTTCTTTGTCCAAGATCCGAAATTGTAACTAGTACAACAATCATCATTTTGCTGATGTGAAACCAAATTTTAGATGGGAAGAGCTTTTAATTTCTAAGTTGGACATGATTTTTATGTTGCAGAAATGTCAGATCAAAACTTTGTTGATGAAGACAGAGAAGTTGAAAAGAGAAGCAGTGATTGCAATACTAAAAGTGTCAAGACTCCAGAAACCAATGACTTGATCAATGACCAGGTAATTCAAATGATATCAACTTAATTATCATTTCTTGCTACAAAATGATAATCACTGGTTTCTTTTAGGTTGCTGATTAAGTTCCATGAAAATGAGATGATGCTTAACAAGAAAATTCTATTACTGCCAGAAGATACCTAGATCCAAGATTTTCGCCAAGACGAGATAAAAGACTTATCGACTACTTTTCTAACTTGGAAAAGGCTATATATATGATCAAAGATTGTTGATGAAGTCTAGAATACTCATTTTGATGCTCTTGGTTTGTCTAGTAATTAAGTTCTAATACCTTGGGATGTTGTGTAGTAATCAGTAAATCAGCAACTGGGTAGATGAGTATGGTAAATGTGTAGATATTTTTTTGGTTAGGACAAGAAAATGCATGACATTTGTTTAAGTTCTTATCCTTCTTTTTACCATATTACCCAGAAGAGCGCTAAATGATACAGTAAGAATTTTCAATTTTCTTTTCAATCATTTAGAAGTTGTTTATGTTATACAATGTAATCTGTGTTGTAAATCTGTTAGTAGTC

mRNA sequence

CTTCTTCAATATCTCTCTCCACTGGCCCCGCTTCTCTCTCTTTCGCCATTGCAAATCTGGTGATAATTTTTTCATCTTCTTCGGTTTTTTCATGGAGCTTTTGCCTCGGAATTTGGCGAATCTCAAGCACAGAGAAACTCGTAACGACTCACTGTTCGTCTCTGAATTGGCCATGGACGACGAGTCAACCGAGTTTTCCCTCCCGGTCGTCGACGATTCTTCTAGCCAGCACGGAATTGCTGATAATCCGGTTTCGATTTTAGGGCACTCATATGGCGGAGTCTGTACCTTCTGATTGGACCGATGAGAAGCATCATCTGTTCCTTGAATCCATGGAGGCGTCTTTTATAAACCAGATGTTTGATTCTTCGCATTCAGTTAGTACCTGCTCCGGCAAAGAACATTCATCGCGCACAAAATTGCACGGCCAAAGCCAGGCTGGCTCTCATGTTCATTCACATTTTGGCCAGTTTAAGGTTCTTCGACGAGGAAGCTGGAAGAATATTAATTTCGAACCAACTGAATCTCGGCCAAATTTATTGAAGGATTATCAAGCTCTCTCGCATAATCCATGGATACATCACTTCAGAGCTACTCGTAGAAACAAGGATGTTGCATGTAAAAGTCAAGCTACCAGTTCAAGAGGAAGGAATTTGTTGCCACTCCGAGCAGCCAATAATTCAGAACCTATGCGTGCTTCTAATACTGATTTGTGTCAGCAATATATCAACGACAATAAAGAAATGTCAGATCAAAACTTTGTTGATGAAGACAGAGAAGTTGAAAAGAGAAGCAGTGATTGCAATACTAAAAGTGTCAAGACTCCAGAAACCAATGACTTGATCAATGACCAGGTTGCTGATTAAGTTCCATGAAAATGAGATGATGCTTAACAAGAAAATTCTATTACTGCCAGAAGATACCTAGATCCAAGATTTTCGCCAAGACGAGATAAAAGACTTATCGACTACTTTTCTAACTTGGAAAAGGCTATATATATGATCAAAGATTGTTGATGAAGTCTAGAATACTCATTTTGATGCTCTTGGTTTGTCTAGTAATTAAGTTCTAATACCTTGGGATGTTGTGTAGTAATCAGTAAATCAGCAACTGGGTAGATGAGTATGGTAAATGTGTAGATATTTTTTTGGTTAGGACAAGAAAATGCATGACATTTGTTTAAGTTCTTATCCTTCTTTTTACCATATTACCCAGAAGAGCGCTAAATGATACAGTAAGAATTTTCAATTTTCTTTTCAATCATTTAGAAGTTGTTTATGTTATACAATGTAATCTGTGTTGTAAATCTGTTAGTAGTC

Coding sequence (CDS)

ATGGCGGAGTCTGTACCTTCTGATTGGACCGATGAGAAGCATCATCTGTTCCTTGAATCCATGGAGGCGTCTTTTATAAACCAGATGTTTGATTCTTCGCATTCAGTTAGTACCTGCTCCGGCAAAGAACATTCATCGCGCACAAAATTGCACGGCCAAAGCCAGGCTGGCTCTCATGTTCATTCACATTTTGGCCAGTTTAAGGTTCTTCGACGAGGAAGCTGGAAGAATATTAATTTCGAACCAACTGAATCTCGGCCAAATTTATTGAAGGATTATCAAGCTCTCTCGCATAATCCATGGATACATCACTTCAGAGCTACTCGTAGAAACAAGGATGTTGCATGTAAAAGTCAAGCTACCAGTTCAAGAGGAAGGAATTTGTTGCCACTCCGAGCAGCCAATAATTCAGAACCTATGCGTGCTTCTAATACTGATTTGTGTCAGCAATATATCAACGACAATAAAGAAATGTCAGATCAAAACTTTGTTGATGAAGACAGAGAAGTTGAAAAGAGAAGCAGTGATTGCAATACTAAAAGTGTCAAGACTCCAGAAACCAATGACTTGATCAATGACCAGGTTGCTGATTAA

Protein sequence

MAESVPSDWTDEKHHLFLESMEASFINQMFDSSHSVSTCSGKEHSSRTKLHGQSQAGSHVHSHFGQFKVLRRGSWKNINFEPTESRPNLLKDYQALSHNPWIHHFRATRRNKDVACKSQATSSRGRNLLPLRAANNSEPMRASNTDLCQQYINDNKEMSDQNFVDEDREVEKRSSDCNTKSVKTPETNDLINDQVAD

Homology

[Close]

BLAST of Sed0003020 vs. NCBI nr
Match: KAG7037801.1 (hypothetical protein SDJN02_01432 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 303.9 bits (777), Expect = 1.0e-78
Identity = 156/199 (78.39%), Postives = 169/199 (84.92%), Query Frame = 0


Query: 1   MAESVPSDWTDEKHHLFLESMEASFINQMFDSSHSVSTCSGKEHSSRTKLHGQSQAGSHV 60
           M ESVPSDWTDEKHHLFLESMEASF++QMFDS+HS  T SGKE+SS TKLHGQSQA SHV
Sbjct: 46  MTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHV 105

Query: 61  HSHFGQFKVLRRGSWKNINFEPTESRPNLLKDYQALSHNPWIHHFRATRRNKDVACKSQA 120
           HSH GQFKVLR+GSWKN+NFEPTE+RPNLL DYQALS NPWIHHFRA RRNK VACKS A
Sbjct: 106 HSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARRNKSVACKSPA 165

Query: 121 TSSRGRNLLPLRAANNSEPMRASNTDLCQQYINDNKEMSDQNFVDEDREVE---KRSSDC 180
            SSR RNLLP    NNS PMRA N+DL Q YI +NKE+SDQNFVD +REVE   K S+DC
Sbjct: 166 ISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNNKEVSDQNFVDGEREVEKVAKGSNDC 225

Query: 181 NTKSVKTPETNDLINDQVA 197
           NTK VKT ETNDLINDQ+A
Sbjct: 226 NTKRVKTSETNDLINDQIA 244

[Close]

BLAST of Sed0003020 vs. NCBI nr
Match: KAG6608473.1 (Cold-regulated protein 27, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 302.8 bits (774), Expect = 2.2e-78
Identity = 156/198 (78.79%), Postives = 169/198 (85.35%), Query Frame = 0


Query: 1   MAESVPSDWTDEKHHLFLESMEASFINQMFDSSHSVSTCSGKEHSSRTKLHGQSQAGSHV 60
           M ESVPSDWTDEKHHLFLESMEASF++QMFDS+HS  T SGKE+SS TKLHGQSQA SHV
Sbjct: 98  MTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHV 157

Query: 61  HSHFGQFKVLRRGSWKNINFEPTESRPNLLKDYQALSHNPWIHHFRATRRNKDVACKSQA 120
           HSH GQFKVLR+GSWKN+NFEPTE+RPNLL DYQALS NPWIHHFRA RRNK+VACKS A
Sbjct: 158 HSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARRNKNVACKSPA 217

Query: 121 TSSRGRNLLPLRAANNSEPMRASNTDLCQQYINDNKEMSDQNFVDEDREVE---KRSSDC 180
            SSR RNLLP    NNS PMRA N+DL Q YI +NKE+SDQNFVD +REVE   K S+DC
Sbjct: 218 ISSRKRNLLPFGGDNNSGPMRACNSDLSQHYIYNNKEVSDQNFVDGEREVEKVAKGSNDC 277

Query: 181 NTKSVKTPETNDLINDQV 196
           NTK VKT ETNDLINDQV
Sbjct: 278 NTKRVKTSETNDLINDQV 295

[Close]

BLAST of Sed0003020 vs. NCBI nr
Match: XP_038896198.1 (cold-regulated protein 27 isoform X1 [Benincasa hispida])

HSP 1 Score: 302.4 bits (773), Expect = 2.9e-78
Identity = 153/195 (78.46%), Postives = 168/195 (86.15%), Query Frame = 0


Query: 1   MAESVPSDWTDEKHHLFLESMEASFINQMFDSSHSVSTCSGKEHSSRTKLHGQSQAGSHV 60
           M +SVPSDWTDEKHHLFLESMEASF++QMFDS HSV +C  KE+SSR KL GQSQ+ SHV
Sbjct: 46  MTDSVPSDWTDEKHHLFLESMEASFVSQMFDSVHSVGSCPSKENSSRAKLLGQSQSASHV 105

Query: 61  HSHFGQFKVLRRGSWKNINFEPTESRPNLLKDYQALSHNPWIHHFRATRRNKDVACKSQA 120
           HSHFGQFKVLRRGSWKNINFEPTESR NLL DYQALSHNPWIHHFRA R+NK+VACKSQ+
Sbjct: 106 HSHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQS 165

Query: 121 TSSRGRNLLPLRAANNSEPMRASNTDLCQQYINDNKEMSDQNFVDEDREVEKRSSDCNTK 180
             SRGRN LP  AANNS  MRAS++DL QQ+I+ NKE+SDQNFVDE  E EK SSDCN K
Sbjct: 166 IGSRGRNSLPFGAANNSGSMRASDSDLSQQFISSNKEVSDQNFVDE--EAEKGSSDCNAK 225

Query: 181 SVKTPETNDLINDQV 196
            VKTP+TN LINDQV
Sbjct: 226 RVKTPQTNALINDQV 238

[Close]

BLAST of Sed0003020 vs. NCBI nr
Match: XP_038896201.1 (cold-regulated protein 27 isoform X4 [Benincasa hispida])

HSP 1 Score: 302.4 bits (773), Expect = 2.9e-78
Identity = 153/195 (78.46%), Postives = 168/195 (86.15%), Query Frame = 0


Query: 1   MAESVPSDWTDEKHHLFLESMEASFINQMFDSSHSVSTCSGKEHSSRTKLHGQSQAGSHV 60
           M +SVPSDWTDEKHHLFLESMEASF++QMFDS HSV +C  KE+SSR KL GQSQ+ SHV
Sbjct: 1   MTDSVPSDWTDEKHHLFLESMEASFVSQMFDSVHSVGSCPSKENSSRAKLLGQSQSASHV 60

Query: 61  HSHFGQFKVLRRGSWKNINFEPTESRPNLLKDYQALSHNPWIHHFRATRRNKDVACKSQA 120
           HSHFGQFKVLRRGSWKNINFEPTESR NLL DYQALSHNPWIHHFRA R+NK+VACKSQ+
Sbjct: 61  HSHFGQFKVLRRGSWKNINFEPTESRSNLLNDYQALSHNPWIHHFRAARKNKNVACKSQS 120

Query: 121 TSSRGRNLLPLRAANNSEPMRASNTDLCQQYINDNKEMSDQNFVDEDREVEKRSSDCNTK 180
             SRGRN LP  AANNS  MRAS++DL QQ+I+ NKE+SDQNFVDE  E EK SSDCN K
Sbjct: 121 IGSRGRNSLPFGAANNSGSMRASDSDLSQQFISSNKEVSDQNFVDE--EAEKGSSDCNAK 180

Query: 181 SVKTPETNDLINDQV 196
            VKTP+TN LINDQV
Sbjct: 181 RVKTPQTNALINDQV 193

[Close]

BLAST of Sed0003020 vs. NCBI nr
Match: XP_022982275.1 (uncharacterized protein LOC111481154 [Cucurbita maxima])

HSP 1 Score: 301.6 bits (771), Expect = 5.0e-78
Identity = 155/198 (78.28%), Postives = 169/198 (85.35%), Query Frame = 0


Query: 1   MAESVPSDWTDEKHHLFLESMEASFINQMFDSSHSVSTCSGKEHSSRTKLHGQSQAGSHV 60
           M ESVPSDWTDEKHHLFLESMEASF++QMFDS+HS  T SGKE+SS TKLHGQSQA SHV
Sbjct: 98  MTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHV 157

Query: 61  HSHFGQFKVLRRGSWKNINFEPTESRPNLLKDYQALSHNPWIHHFRATRRNKDVACKSQA 120
           HSH GQFKVLR+GSWKN+NFEPTE+RPNLL DYQALS NPWIHHFRA R+NK+VACKS A
Sbjct: 158 HSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARKNKNVACKSPA 217

Query: 121 TSSRGRNLLPLRAANNSEPMRASNTDLCQQYINDNKEMSDQNFVDEDREVE---KRSSDC 180
            SSR RNLLP    NNS PMRA N+DL + YI +NKEMSDQNFVD +REVE   K S+DC
Sbjct: 218 ISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNNKEMSDQNFVDGEREVEKVAKGSNDC 277

Query: 181 NTKSVKTPETNDLINDQV 196
           NTK VKT ETNDLINDQV
Sbjct: 278 NTKRVKTSETNDLINDQV 295

[Close]

BLAST of Sed0003020 vs. ExPASy Swiss-Prot
Match: Q8L8T7 (Cold-regulated protein 27 OS=Arabidopsis thaliana OX=3702 GN=COR27 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.3e-08
Identity = 62/201 (30.85%), Postives = 99/201 (49.25%), Query Frame = 0


Query: 3   ESVPSDWTDEKHHLFLESMEASFINQMFDSSHSVSTCSGKEHSSRTKLHGQSQAGSHVHS 62
           E + ++WT+EKH L+L+SMEASF++Q++   +S+      E+ S +   G  +  S    
Sbjct: 42  EYMETEWTNEKHSLYLKSMEASFVDQLY---NSLGALGKNENVSESTRFGSGRKPSQ--- 101

Query: 63  HFGQFKVLRRGSWKNINFEPTESRPNLLKDYQALSH----NPWIHHFRATRRNK----DV 122
              QFKVL  G W+ IN +  E R N    +   SH    +PWI H++   + +    D 
Sbjct: 102 --EQFKVLHDGFWQKINVKQPEHRIN--GRHGGNSHEFLRSPWIKHYKPLVKTQIPVTDE 161

Query: 123 ACKSQATSSRGRNLLPLRAANNSEPMRASNTDLCQQYINDNKEMSDQNFVDEDREVEKRS 182
                 +SS G+  +    + +S    +S++    Q      E+SDQNFV+E  + E  S
Sbjct: 162 PENQVVSSSNGKKGICSSGSASSLKQLSSHSRDHDQISVGEAEVSDQNFVNEGIKGENGS 221

Query: 183 SDCNTKSVKTPETNDLINDQV 196
           S    K+V   E++    DQV
Sbjct: 222 SK-KMKTVMMSESSS--TDQV 229

[Close]

BLAST of Sed0003020 vs. ExPASy TrEMBL
Match: A0A6J1J278 (uncharacterized protein LOC111481154 OS=Cucurbita maxima OX=3661 GN=LOC111481154 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.4e-78
Identity = 155/198 (78.28%), Postives = 169/198 (85.35%), Query Frame = 0


Query: 1   MAESVPSDWTDEKHHLFLESMEASFINQMFDSSHSVSTCSGKEHSSRTKLHGQSQAGSHV 60
           M ESVPSDWTDEKHHLFLESMEASF++QMFDS+HS  T SGKE+SS TKLHGQSQA SHV
Sbjct: 98  MTESVPSDWTDEKHHLFLESMEASFVSQMFDSAHSGGTGSGKENSSWTKLHGQSQAASHV 157

Query: 61  HSHFGQFKVLRRGSWKNINFEPTESRPNLLKDYQALSHNPWIHHFRATRRNKDVACKSQA 120
           HSH GQFKVLR+GSWKN+NFEPTE+RPNLL DYQALS NPWIHHFRA R+NK+VACKS A
Sbjct: 158 HSHVGQFKVLRQGSWKNVNFEPTEARPNLLNDYQALSRNPWIHHFRAARKNKNVACKSPA 217

Query: 121 TSSRGRNLLPLRAANNSEPMRASNTDLCQQYINDNKEMSDQNFVDEDREVE---KRSSDC 180
            SSR RNLLP    NNS PMRA N+DL + YI +NKEMSDQNFVD +REVE   K S+DC
Sbjct: 218 ISSRKRNLLPFGGDNNSGPMRACNSDLSRHYIYNNKEMSDQNFVDGEREVEKVAKGSNDC 277

Query: 181 NTKSVKTPETNDLINDQV 196
           NTK VKT ETNDLINDQV
Sbjct: 278 NTKRVKTSETNDLINDQV 295

[Close]

BLAST of Sed0003020 vs. ExPASy TrEMBL
Match: A0A6J1IM11 (uncharacterized protein LOC111476815 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111476815 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.7e-77
Identity = 149/197 (75.63%), Postives = 165/197 (83.76%), Query Frame = 0


Query: 1   MAESVPSDWTDEKHHLFLESMEASFINQMFDSSHSVSTCSGKEHSSRTKLHGQSQAGSHV 60
           M +SVPSDWTDEKHHLFLESME SF++QMFDS HSV +C  KE+SS TKLHGQSQ+ SHV
Sbjct: 46  MTDSVPSDWTDEKHHLFLESMETSFVSQMFDSVHSVGSCPRKENSSHTKLHGQSQSASHV 105

Query: 61  HSHFGQFKVLRRGSWKNINFEPTESRPNLLKDYQALSHNPWIHHFRATRRNKDVACKSQA 120
           H+HFGQFKVLRRGSWKNINFE TESR NLL D+QALS NPWIHHFRA R+NK+VACKSQA
Sbjct: 106 HAHFGQFKVLRRGSWKNINFETTESRSNLLNDFQALSRNPWIHHFRADRKNKNVACKSQA 165

Query: 121 TSSRGRNLLPLRAANNSEPMRASNTDLCQQYINDNKEMSDQNFVDEDREVEKRSSDCNTK 180
             S GRNL PL AANNSEP+RA  +DL  QYI+ N+E+SDQNFVDEDREV   SSDCN K
Sbjct: 166 IGSGGRNLFPLGAANNSEPLRACGSDLSLQYISSNEEVSDQNFVDEDREVGNGSSDCNAK 225

Query: 181 SVKTPETNDLINDQVAD 198
            V TPETN LIN+Q  D
Sbjct: 226 RVNTPETNALINEQPED 242

[Close]

BLAST of Sed0003020 vs. ExPASy TrEMBL
Match: A0A6J1IFL9 (uncharacterized protein LOC111476815 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111476815 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 5.9e-77
Identity = 148/194 (76.29%), Postives = 164/194 (84.54%), Query Frame = 0


Query: 1   MAESVPSDWTDEKHHLFLESMEASFINQMFDSSHSVSTCSGKEHSSRTKLHGQSQAGSHV 60
           M +SVPSDWTDEKHHLFLESME SF++QMFDS HSV +C  KE+SS TKLHGQSQ+ SHV
Sbjct: 46  MTDSVPSDWTDEKHHLFLESMETSFVSQMFDSVHSVGSCPRKENSSHTKLHGQSQSASHV 105

Query: 61  HSHFGQFKVLRRGSWKNINFEPTESRPNLLKDYQALSHNPWIHHFRATRRNKDVACKSQA 120
           H+HFGQFKVLRRGSWKNINFE TESR NLL D+QALS NPWIHHFRA R+NK+VACKSQA
Sbjct: 106 HAHFGQFKVLRRGSWKNINFETTESRSNLLNDFQALSRNPWIHHFRADRKNKNVACKSQA 165

Query: 121 TSSRGRNLLPLRAANNSEPMRASNTDLCQQYINDNKEMSDQNFVDEDREVEKRSSDCNTK 180
             S GRNL PL AANNSEP+RA  +DL  QYI+ N+E+SDQNFVDEDREV   SSDCN K
Sbjct: 166 IGSGGRNLFPLGAANNSEPLRACGSDLSLQYISSNEEVSDQNFVDEDREVGNGSSDCNAK 225

Query: 181 SVKTPETNDLINDQ 195
            V TPETN LIN+Q
Sbjct: 226 RVNTPETNALINEQ 239

[Close]

BLAST of Sed0003020 vs. ExPASy TrEMBL
Match: A0A6J1FBV0 (uncharacterized protein LOC111442637 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111442637 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 8.6e-76
Identity = 149/198 (75.25%), Postives = 166/198 (83.84%), Query Frame = 0


Query: 1   MAESVPSDWTDEKHHLFLESMEASFINQMFDSSHSVSTCSGKEHSSRTKLHGQSQAGSHV 60
           M +SVPSDWTDEKHHLFLESME SF++QMFDS HSV +C  KE+SS TKLHGQSQ+ SHV
Sbjct: 46  MTDSVPSDWTDEKHHLFLESMETSFVSQMFDSVHSVGSCPRKENSSHTKLHGQSQSASHV 105

Query: 61  HSHFGQFKVLRRGSWKNINFEPTESRPNLLKDYQALSHNPWIHHFRATRRNKDVACKSQA 120
           HSHFGQFKVLRRGSWKNINFE TESR NLL D+QALS NPWIHHFRA R+NK+VACKSQA
Sbjct: 106 HSHFGQFKVLRRGSWKNINFETTESRSNLLNDFQALSRNPWIHHFRADRKNKNVACKSQA 165

Query: 121 TSSRGRNLLPLRAANNSEPMRASNTDLCQQYINDNKEMSDQNFVDEDREVEKRSSDC-NT 180
             S GRNL PL AAN+SEP+RA ++DL  QYI+ N+E+SDQNFVDEDREV   SSDC N 
Sbjct: 166 IGSGGRNLFPLGAANDSEPLRACDSDLSLQYISSNEEVSDQNFVDEDREVGNGSSDCSNA 225

Query: 181 KSVKTPETNDLINDQVAD 198
           K V TPETN LIN+Q  D
Sbjct: 226 KRVNTPETNALINEQPED 243

[Close]

BLAST of Sed0003020 vs. ExPASy TrEMBL
Match: A0A6J1F6L8 (uncharacterized protein LOC111442637 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442637 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.9e-75
Identity = 148/195 (75.90%), Postives = 165/195 (84.62%), Query Frame = 0


Query: 1   MAESVPSDWTDEKHHLFLESMEASFINQMFDSSHSVSTCSGKEHSSRTKLHGQSQAGSHV 60
           M +SVPSDWTDEKHHLFLESME SF++QMFDS HSV +C  KE+SS TKLHGQSQ+ SHV
Sbjct: 46  MTDSVPSDWTDEKHHLFLESMETSFVSQMFDSVHSVGSCPRKENSSHTKLHGQSQSASHV 105

Query: 61  HSHFGQFKVLRRGSWKNINFEPTESRPNLLKDYQALSHNPWIHHFRATRRNKDVACKSQA 120
           HSHFGQFKVLRRGSWKNINFE TESR NLL D+QALS NPWIHHFRA R+NK+VACKSQA
Sbjct: 106 HSHFGQFKVLRRGSWKNINFETTESRSNLLNDFQALSRNPWIHHFRADRKNKNVACKSQA 165

Query: 121 TSSRGRNLLPLRAANNSEPMRASNTDLCQQYINDNKEMSDQNFVDEDREVEKRSSDC-NT 180
             S GRNL PL AAN+SEP+RA ++DL  QYI+ N+E+SDQNFVDEDREV   SSDC N 
Sbjct: 166 IGSGGRNLFPLGAANDSEPLRACDSDLSLQYISSNEEVSDQNFVDEDREVGNGSSDCSNA 225

Query: 181 KSVKTPETNDLINDQ 195
           K V TPETN LIN+Q
Sbjct: 226 KRVNTPETNALINEQ 240

[Close]

BLAST of Sed0003020 vs. TAIR 10
Match: AT5G42900.1 (cold regulated gene 27 )

HSP 1 Score: 60.1 bits (144), Expect = 2.3e-09
Identity = 62/201 (30.85%), Postives = 99/201 (49.25%), Query Frame = 0


Query: 3   ESVPSDWTDEKHHLFLESMEASFINQMFDSSHSVSTCSGKEHSSRTKLHGQSQAGSHVHS 62
           E + ++WT+EKH L+L+SMEASF++Q++   +S+      E+ S +   G  +  S    
Sbjct: 42  EYMETEWTNEKHSLYLKSMEASFVDQLY---NSLGALGKNENVSESTRFGSGRKPSQ--- 101

Query: 63  HFGQFKVLRRGSWKNINFEPTESRPNLLKDYQALSH----NPWIHHFRATRRNK----DV 122
              QFKVL  G W+ IN +  E R N    +   SH    +PWI H++   + +    D 
Sbjct: 102 --EQFKVLHDGFWQKINVKQPEHRIN--GRHGGNSHEFLRSPWIKHYKPLVKTQIPVTDE 161

Query: 123 ACKSQATSSRGRNLLPLRAANNSEPMRASNTDLCQQYINDNKEMSDQNFVDEDREVEKRS 182
                 +SS G+  +    + +S    +S++    Q      E+SDQNFV+E  + E  S
Sbjct: 162 PENQVVSSSNGKKGICSSGSASSLKQLSSHSRDHDQISVGEAEVSDQNFVNEGIKGENGS 221

Query: 183 SDCNTKSVKTPETNDLINDQV 196
           S    K+V   E++    DQV
Sbjct: 222 SK-KMKTVMMSESSS--TDQV 229

[Close]

BLAST of Sed0003020 vs. TAIR 10
Match: AT5G42900.2 (cold regulated gene 27 )

HSP 1 Score: 60.1 bits (144), Expect = 2.3e-09
Identity = 62/201 (30.85%), Postives = 99/201 (49.25%), Query Frame = 0


Query: 3   ESVPSDWTDEKHHLFLESMEASFINQMFDSSHSVSTCSGKEHSSRTKLHGQSQAGSHVHS 62
           E + ++WT+EKH L+L+SMEASF++Q++   +S+      E+ S +   G  +  S    
Sbjct: 42  EYMETEWTNEKHSLYLKSMEASFVDQLY---NSLGALGKNENVSESTRFGSGRKPSQ--- 101

Query: 63  HFGQFKVLRRGSWKNINFEPTESRPNLLKDYQALSH----NPWIHHFRATRRNK----DV 122
              QFKVL  G W+ IN +  E R N    +   SH    +PWI H++   + +    D 
Sbjct: 102 --EQFKVLHDGFWQKINVKQPEHRIN--GRHGGNSHEFLRSPWIKHYKPLVKTQIPVTDE 161

Query: 123 ACKSQATSSRGRNLLPLRAANNSEPMRASNTDLCQQYINDNKEMSDQNFVDEDREVEKRS 182
                 +SS G+  +    + +S    +S++    Q      E+SDQNFV+E  + E  S
Sbjct: 162 PENQVVSSSNGKKGICSSGSASSLKQLSSHSRDHDQISVGEAEVSDQNFVNEGIKGENGS 221

Query: 183 SDCNTKSVKTPETNDLINDQV 196
           S    K+V   E++    DQV
Sbjct: 222 SK-KMKTVMMSESSS--TDQV 229

[Close]

BLAST of Sed0003020 vs. TAIR 10
Match: AT5G42900.3 (cold regulated gene 27 )

HSP 1 Score: 59.7 bits (143), Expect = 3.1e-09
Identity = 62/202 (30.69%), Postives = 103/202 (50.99%), Query Frame = 0


Query: 3   ESVPSDWTDEKHHLFLESMEASFINQMFDSSHSVSTCSGKEHSSRTKLHGQSQAGSHVHS 62
           E + ++WT+EKH L+L+SMEASF++Q++   +S+      E+ S +   G  +  S    
Sbjct: 42  EYMETEWTNEKHSLYLKSMEASFVDQLY---NSLGALGKNENVSESTRFGSGRKPSQ--- 101

Query: 63  HFGQFKVLRRGSWKNINFEPTESRPNLLKDYQALSH----NPWIHHFRATRRNK----DV 122
              QFKVL  G W+ IN +  E R N    +   SH    +PWI H++   + +    D 
Sbjct: 102 --EQFKVLHDGFWQKINVKQPEHRIN--GRHGGNSHEFLRSPWIKHYKPLVKTQIPVTDE 161

Query: 123 ACKSQATSSRG-RNLLPLRAANNSEPMRASNTDLCQQYINDNKEMSDQNFVDEDREVEKR 182
                 +SS G + +    +A++ + + + + D     I+  +E+SDQNFV+E  + E  
Sbjct: 162 PENQVVSSSNGKKGICSSGSASSLKQLSSHSRD--HDQISVGEEVSDQNFVNEGIKGENG 221

Query: 183 SSDCNTKSVKTPETNDLINDQV 196
           SS    K+V   E++    DQV
Sbjct: 222 SSK-KMKTVMMSESSS--TDQV 228

The following BLAST results are available for this feature:

BLAST of Sed0003020 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7037801.1	1.0e-78	78.39	hypothetical protein SDJN02_01432 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6608473.1	2.2e-78	78.79	Cold-regulated protein 27, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038896198.1	2.9e-78	78.46	cold-regulated protein 27 isoform X1 [Benincasa hispida]	[more]
XP_038896201.1	2.9e-78	78.46	cold-regulated protein 27 isoform X4 [Benincasa hispida]	[more]
XP_022982275.1	5.0e-78	78.28	uncharacterized protein LOC111481154 [Cucurbita maxima]	[more]

BLAST of Sed0003020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L8T7	3.3e-08	30.85	Cold-regulated protein 27 OS=Arabidopsis thaliana OX=3702 GN=COR27 PE=1 SV=1	[more]

BLAST of Sed0003020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J278	2.4e-78	78.28	uncharacterized protein LOC111481154 OS=Cucurbita maxima OX=3661 GN=LOC111481154...	[more]
A0A6J1IM11	2.7e-77	75.63	uncharacterized protein LOC111476815 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1IFL9	5.9e-77	76.29	uncharacterized protein LOC111476815 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FBV0	8.6e-76	75.25	uncharacterized protein LOC111442637 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1F6L8	1.9e-75	75.90	uncharacterized protein LOC111442637 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Sed0003020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42900.1	2.3e-09	30.85	cold regulated gene 27	[more]
AT5G42900.2	2.3e-09	30.85	cold regulated gene 27	[more]
AT5G42900.3	3.1e-09	30.69	cold regulated gene 27	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..62
None	No IPR available	PANTHER	PTHR33676:SF3	COLD REGULATED PROTEIN 27	coord: 3..197
IPR044678	Cold-regulated protein 27/28	PANTHER	PTHR33676	COLD REGULATED PROTEIN 27	coord: 3..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003020.1	Sed0003020.1	mRNA
Sed0003020.2	Sed0003020.2	mRNA
Sed0003020.3	Sed0003020.3	mRNA
Sed0003020.4	Sed0003020.4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042752	regulation of circadian rhythm
biological_process	GO:0009409	response to cold