Sed0003002 (gene) Chayote v1

Overview


Name	Sed0003002
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Reverse transcriptase domain-containing protein
Location	LG06: 26129320 .. 26142734 (-)
RNA-Seq Expression	Sed0003002
Synteny	Sed0003002

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGGAAAAGCCACATCAAAGACCGCTGCTCTAGAAGGCATAATCAAAGGAAGAAACACTACCTCGAAGGTGCTTGCTCCAAGAAACTACACTAGACCTATCACGCGTAATCGTTCCAAGTCCGTCGAGAGCAATGGACCTCAAGTAACACCATATGCGATAGCAAAAAGAATTGTAGGACTACTAGAGGGGACCTCTGATGAAATCACCGTCAAAGATAACCCATTGTTTGACCAAGTCAGTCCTAGCGTTGATCAACCAAAGGAGACGTCTAATCCTGATGTGATGTCTGTTATGATGGCTGGTGACGGAGGCGATGATCGTATGGCAGAGTTTGAAAGAAAGCTCGAGCAGATGAGAAAAACAATTGAGGAAAGAAACTTAGAGATCGCTTACCTCAAAAATCAAATGCAGAATCGAGAGACAGCTGAATCAAGCCAGAGTCCACATGAGAGAGTTAATGATAAAGGAAAGAACCCTCTCTTTGAGGCACAACCACAACTGCACTCAACCTCAGTCGCTTCCTTATCATCCCAACACTACGACACGATCACGAACACTATTAGAGCTCAAGGTGGTGGGCTAGTTCAAAGTTCTCTCTTGTACTCCAAGCCATACACAAAGAGAATAGACAACTTAAGAATGCATGCAGGATACCAACCGCCTAAGTTCCAGCAGTTTGATGGAAAAGGCAACCCCAAACAGCATGTTGCTCATTTCGTAGAGACTTGTGAAACTGCTGGAACTCGAGGAGACCTTCTCATCAGGCAGTTTGTCCGAACGTTAAAGGGGAATGCGTTCGACTGGTATACTGATCTTGAAGCTGAAATGATAGATAGCTGGGAAGACTTGGAGAGAGAGTTCCCTAATCGGTTCTATAGCACGAGACGGACTGTCAGCATGATAGAATTAACAAATGCGAAGCAGCGGAAGGGCAAGCCTGTCGTCGACTATATTAACCGTTGGCGAGCTCTAAGTCTGGACTGCAAAGACCGCCTCACTGAAACGTCCGCGATAGACATTTGTATCCAGGGCATACATTGGGGACTTCTATACATGTAACAGCCCAGTTTCCTATTCCAGTTTTCGAGGTGCCTTCGGGTCCAGTTTCGGTTGTTTGGTTGGGTTTTAGAGCCGTTTGGCCCCTTGGGGGTATTTTGGTCTTTTAGCTATCCGGGCAGGATTTGGGGTTTTCAGGGCTTCGAGGTAGCTCCTGCCTTTGTCGAGGCCTGTTTGTTGGTGGCTGCGAGTCCCGTGGTGTTTGGGCTAGTCGGTTGGATGCTCGGTTGTGGTTTGGGCTTTGGCAAAGTGTTGGTTGGTTGTGTGTTTCCTTTGGGATTCGAGCCCGAGCCCTTAGAGTTGCTTTGGGAGTTGGATTTAAGTGAGTTTGATTGATTGGAAAAGATTGCTTCGGTCGGGTCTCGAAAGAGGAAGCCGGGAAATGAGATTTTGAAATTTTAAGTGGATAAGGATGGAACATGGAATTAAAAATCCCATTTTTTCCCTTTTTTCCCTTTTTCCTTTTTATTTCCCTTTTTTCTTTTATTTTTCCCCCAATTCATTTTTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCGAGCCCCCCACCTAGCCCGACCCAGCCCCTTGGCTCGCCCAAGCCCAGCCCCAGCCCTAGCAGCCCAGCGCCCAGCCCGAGCTAGTTCAGCCCCAGCCCGCGCGCGCCCTCACCCAGGCCGAGCTCGCCCTGCCCAGGTCGTGCCATCGCCAGCCCCAGCTCGCTCGAGCGTCGCCCAGCCGCGCGCGCCCTCGCCCTTGCCAGCCCGAGCGTCGCGCACCCCCGCATCGTGTCGTTCACGCCCGCGCGCCGTCCCCTGTGCCGAGCCGCACCGCGCGCCGTCGCCCAGCCGAGCAAGCGCCCACGCCCGCGCGCCCAGCGTCGCCCCAGCGCCCGTCCGCGCGCAGCTCGCGCCCAGCCAGGCTCTTTGGCTGCCTAGCCCGTGCATCCGGCTCATTCGCGTGTCAGCCGCGCCTCGTGAGTTGCTCCCGAGCCGAGCCCTGTTTATTTTAGTGTATTTAGGGCTATTTATGATTATTGATGTGTTTGCTTGGCTCGTTATAGGTTGCTCGGGTTCGATCGCAGTTATTTTTATTGTGTGTTGTTACCTTCCGACCAGGTAAGGATTTCTTACCGGAGTTGTGTGGGCCCTGCGATATTTTCATGACTATGCCTTGCTTGTTTGCTGACTGTTATGAGCATGATAATAATAGAGCAGCTTTGATTGTTTTCTGCTAGCATGTTTGCTTGATATTACATGTTAGTGCCATGCTAGGTTTGTTCTGCCAGCATGCTTGTGATTCCTGCTTAAGCTCGTAGTATCATGCTAGGTAGTGTGATTGATGTCGGTCTATGCTTGCTAGCCAGGAATCATTGCTTTTTCACTGTACTCTTAGATAGAGTTGTAGGGTTTGTCATCATCCGCAGGTGAGCGGACATAACGTACTTTGTCCCCAGATGGCTCGGTCGGGAGTAAAGTGTGCGAAGCATAACGTATCTTGCTACCCCCCCCCCTCGACCCGCCGGTTGTGGAATTAGCTACCCACTTCGGCATAGCCTAGTTTGTAGCCTGCTAGAGCGGAACCCTTCCAACGATGTAAGCCTACCTTGGCCGGTTCTTAGCTTCGTGTCGGTGGATCGGTACGCATGAGATGGCCGAGGGCCTCGCGCTCATGTGATCGGTGACACCGCTTCCGAGTCATAGGCATGTGCACTGGCCCGCGTAGTTTGCCCTTAGGCCCCGCATTTACGCCCGGTTGCGAGAGGAGCATGCGGTGTGCGCGCCACGCGCGTTAGTTCTTGCCGGTTCGGAGAGCTCCCGGGCTAATGTCGTGAGTACACCATTCTTTCCGTTAGAGATCGACTTGGTACTCTCCGTAAGTCCAGATTAGTGCAAGGGCAAGGAGGCCCTTGAGGACATTCTTGGGATCGATGTATTCCCCGAGTGACGATACCTCGGTGATGTCGGGATTGGTCGATGTATCCAATCCCGGCTAGGCCGGAAGAAAGAGACTTAGATGACTCGGATCTTGTTTTATGAGCTCGTTGAGCCATGATGCATGTTGGTAGCTATTTGCTTGCATGCTTTGGTACTAGATGACCGATTATATCGTATTGTACCCCGGTTGGGGATTCTTACTTAGTAATTCGTTACTCACCCTTATTTCTGTGGTTTTTCCACAGGTATCCATGGTGCGAGACAGGATGGCTGGAGGAGGAGCTGTGATCATGGAAAACCCATTGTTCAACTCTGAGTTTTATGTTTATGATGTAAATGTTCTCTGAATGCATGTAGTTGGGCACGGAGCCCTAGGGTGTTTTCTGAATGTATTTCTGGATTCTAGCATTGTTGTAAAGTTTGTATGTTATAAATAAATCTCTCGATCGAGTAAGCTTTGTAAATGTATTTGTCTTGGAGCAGATGCTTGGAAACAGGGACGAGTTTCGAGGATTGATGTTGATTTTAAATGGATGTTTTATGTTTGAGTTTTTACTTAGAATCCGAACACCATCTTGGAAATTTTCTGTAGATTTGTATGCATGCATTGAGGTAACGGCCTATTTAGAACCCCATTCGGGTCGGGTCGTTACAGGTTGGTATCGAGCTCGAGTCATAGATTCTGTGAGACCGACCTTTGTTGTAGGTCGTTTTTCCATGATCATCGGCACTCGATACATCAGTGCGCCTAAGTTTCTTGTTTTAAAGAAAGGGGTAAGAATTTACAATACTTTTCATCTAGTGTATGCCTTGTGTAGAGTTGTGGAGCGGAGACGAGCGGGTTTCGACTCGTTGTTGGTTTGGGCTTAGAGAGCCATCATGCCAACTTTCATGCGATCTGCGAGCATGTTTTAGCGGCTTGTTGAGGTATCCGGATAGATTCGATGCCACAGGACGTCGTCCCCGAGGGAGGTAGAGCTTAGACTCCCATTGGCCATTTGTGGCCCGGTTGTTGCTTTTCCCTAGTGAGAGGGTGGAGGTGCCTTGTGCGGTCGCCAGATGTGTTGATCGCACCCGGAGGAGCGGGGCGCTTGGCATGTCCGGCCGAGGGAGTTGGGCGATCGTGTTGATGTTGAGGCGCGTCCTGAGTCGTTTAGACCCGTTGGCGAGTTGGCCCGGGCGGTTGAGTTGCCTAGAGGAGGGGGTAGAGGCTAGCGGCGCCTCAGTATGACTCCTTGAGCGAGTGTGCTCCAACCATGAGAGATTGGATGGCGAGTCTTTAGCTATCGAGAGAGCGGAGACCAGCGCGATTTGTAGCGCGTAGTGAGGAGTCCCGGCACGAGATAGCCCAGTGACGAGTTTGTTTCAAAGATTTCCCCCGGTAGCTCTTGTAGCCCCGAAGGTTCCCGAGAGGGCATGTTCAGTGAGAGTTTATCTTTGATGAGGATGCTTGTGGAGCGAGTCCCCGTGTGGACTAGCACAGGTAGCTCAAGTGTTGATCTTGAGCCTTAGCGGTTGTTGATTGCCCGGTGAGTAGGCTGCGAGTTGGCGACCTTGAGGAGATTGTTGAGGCATCTTTGTGCTCCCATAAAGTGTTGTTTGTTTTAGTAAGTCCCGCTGCTAGTAGTAAAGCGATTGGCGAGTTTGAGTTTAGCATCCGTGTGTGGGATGCCCTGCTGTTCAGAGGCCGAGGTGTGCCGTTCCTGTGCTGTTTGGTACAACAGTTGGTGGTGGTAGTCCCTTGTGAGAGGTGGACTAGCAAGTCTCCACCAGTCGCCCGATTGATTGGCAAGTTGCCGTGTTAGTGGCTTGAGGCAGATATAGAGACATCTTTGCCCCCTTGCAAGCCTGTTGTTGTTTAACAGCCCAGTTTCCTCAGATGTTTGGTAGAGTTAAGCACTCTTCCTTGGTGAGCTCCTAGAGAGGAGCTAGCTGCTGCTTGTTGAGATCCGGCCAGAGCTTTGTTGAGCATCATGAGGAGATGCTAGTGTAGGCCGTGAGCCTTCTGTTTGTTGAGTTGCCATAGGCATGGCTGTTTGAGTTGAGCCCTCGTATGCCTAGCTAGAGTTGTTGTCACTTGAGGTAGTGACCTTGTTGGCCCCATCTGTAGTATGATGTGGATTTGGTAGTAGTAGCACTTGAGGTGCATTGGTTGGTGTGCCACTTTGGCACTAAGTCTGGTTCAGGCTTGAGTTTGGCTTGGGCATAGCAGTTGGTTCTATGCCGTTCGGAGTTCAACGCACTCCTTTAGCCTTGGATTCGTTTATGGCAGTTGCACCTTTTTAGGTCGTGCCAGAGGGCTAGTTCAGTGGTAGTCGATGGACTACAAGCGAAAGGATGCTCGAGAGGAGCCGGACCCTCTTCCTAGTGTTTTTGGAGGTTGAGTAAGTCAGTAGGTTGCCGGTTGGCAAGTGTTGGTGCGCGTGAGTCTCGCGCTAGTGTTAAGGCCAAGAGTTTCTTTGTGGTTGGTAGTGTGGTCAACTACCTTCGAGGGCCTTATCTGAGGAGAGTTGAGCATCGTAGATGCAAGTTTGGTCCAGCAGAGGGACCCTGAGTTGGATGCTTTTGAGGCGAGATGAGCTGATGCCTTGCGAGAGGATTTGGATGCCTTATGGGTAAGCACCCTTGGTAGAGGCTTTGTATAAAGTGAGTTCGGTGTGGCATGGTTATGCCTTGGTAAAGCAAGGTTGCCTCAGTTTTGAGCATCGTGTGGAGTTGGAACTTTTGGTGTTCCTTCGGTTGGTGTTCAGTTGGAAACTGAACAAGTGCGGTGGTAGCAAAGCCGCGCAGTTTCTGGTCGCCTTGGCTAAGAGAGCCGTTCGGATCCTTTCCTTGGGTAGAAGCCTTGTTGTGGCTGATGTTTGAGTAGGAGGACGACGCATTCGGTAGAGTTTCGGGTCCTCTTGGTTCCCAAGGAGTTGGAGTTGGCCTGCATGGTTGAGATGCTGGAGAGAGTTGTGCCTGTTCAGGCAGTTGGCTGTTAGCTCGTTCGTCGACCGTGTGTGTCTAGGGTGATCGGAGGATCCCTAGGTTGTGGAGAGCCTCTCCAGAGCTCAGTCAGGCCCAGCTAGTGAGTTTCAGTTGGCTAGCTGGAGGCGTGTAGTTTGTAGCCTCGGTTGAGTTGCTAGCAGTCTTGGTAGACTAGCTAGCTAGTGGTTGTTTGGAGTAGAGTCCGGATTGGTTCCGGTGCGGTGGCAAGTTGATGCATGGTGTCGACCAAGGTGTGGTTTGGAGCTGCTAGAGATTAGCTTTGCTCGTGGGGCGAGTGGTTCGTGCCCTGTCGTGGCTTTCCTGTTTCCAGGTTGTTGAGTTGCCCCGTTTGGCATTTGGAGGTTCAGTCTGAGACGGACCCCTGTTGTTGCCCCGTGAGATTTAGATGTTGTTGCTCTGGTGGAGCAAGACAGTGAGCGTATGTGGAGCTCTCTGTCCTTCGGTTGTCTGCTTGTAAGAGCCGTTTCCTTCTGGGAGTTGTCAGATTTCTCCCGTAGCCATGAGTTGATGGTAGAGGTGCTAGCTTGAAGGAAAAGTTTGTTGGCTGCTTGGAAGCAGTTGGTTGTCCAGTTAGTGGACTCTTGGATGGTGTTCTAGAGGCTGCAGTAAGGGTTGTTTTGCCTCTTGGGAGTATTGGGCCAAGGTTTGGTCCTCTTGTTGTTTAGAGAGCTAGTTCGGTTCTAGCTGGAGGGCATTGCCCTGAGGTCTTGTTCCTAGTCAGGAAGTTTTGGGAGTTGACCCCTCCCTCGGCAGTTGAGCAAGTTCTGTTAGTTTCGGATTGGTGATCCAATTGGTTGAGATTTCCCTTGGGTGTTGCTTCCAAGGGAGAGTTGGTTGCTGCTGCCTTAGGTTTGAGCAAGTCGTGGCGTGTGTGAGTTCAGCGCCCTTCGAGTTTGCTTCTTTGGGAAAGTCGTTTCCCGTTTGGCAGGAGTCAGCTTAGCTCCTAAGTTGTGTAGTTGGTCAGAGTAGCGCAGCGGTCAGCCCAGCGAGAGGGTCCCAGCTTTGTGTTGTTAGCAAGCAAGAGTTGTTTGTCCCCGCAAGGGCGGTGGCCAGCCAATAAGAGTTGTTTCTGGCAAGTTGTTGGTTCTTTGGGGATTGAAGATTTCCCTTCCCCCTAGTCTCGGTGGTGGTTTAGTTGCTCCCTGGATGTCAGCCTCGAGTGTTAGCTTCTGAGGTAGTCTTGCGGATTCGTGTGGCTCAATATCCGTAAGCTTTGAGGTTGTTGATATCCGTTTGCCTTGCGAGGTTTCGGGAGTGGAGCTTCTGGTTGGGAGTTGAGTAGTAGTTTCGAGGCGAGCGTTGCTCGTTATAGCTTAGTTTGAGTTCTGCTGAGCAACCCCTTCTCGGGCTTTGCTCCTTGTTGTTGTGCGCTCGCAGTTGGCGTAGCAGAGCCGTTGAGTGAGTCGGCACGGAGGTGCCGTGGCTTTGGTTGGTAAAGCCGTTGAGCTGTTTTCCTCAAGGTGTTGTGCCGTAGAGAGCTGCGTGATGGTTTAGCCCTTGCAGCCCGAGTTTTCCTTGAGAGGAATTTTGGTGGTTTCCTAGCCTGGCAGTATTTTCTTTGGCCAGTTGCTAGTGGGTTTGCTCCGAAAAGTTTGCTTTCGGCCGTTGAGAGGTTGCAGTTTGTTGGCTTGGCCGAGTTGAGCCTGTGCCTGGCCCTTGTCTATTAGAGGTGGCCGTAGCTGAAGTTTCAGCTGGTGTGAGTGTTGCAGGCCGTTTGGTTTTGGAACTGGAAGGTTCGATTGTTTAACCGGATTTGTGGTTGGGTTGAGGCGCTTGTTAGCAGTGTGAGCTTCGAGAGAGTTCGCCGGTCGTGGCGTGGAGTTGAGTTTGAGCTTGTGGCCCGTCCTCGAGTTTGCTGGGAGTAGCACCCCTTGAGAGTTGGTGCGTGTTGAGGATGTGGTTTGCCGTCTGTTCCCTTTGGAGTTCAGCGTGTGCCCAGTCTGGATGGCATTGTGGCCTTGAGTTTTTGAGAACCCAAGAGGGTTTGGTTCTCGTAGAAGGCTAGTGTTGTTGGCCGAGAAGTTCAGTTGGCTGGATCAGTGGAGTTTTCCTGGAGCTGTTTCGTCTTAGGACTTTCGAGGACGAAAGTCTTAAAAGGAGGAAGTATTGTAACAGCCCAGTTTCCTATTCCAGTTTTTGAGGTGCCTTTGGGTCCAGTTTCGGTTGTTTGGTTGGGTTTAAGAGCCGTTTGGCCCCTTGGGGGTATTTTGGTCTTTTGGCTCTCCGGGCAGGATTTGTGGTTTTCAGGGCTTCGAGGTAGCTCCTGCCTTTGTCGAGGCATGTTTGTTGGTGGCTGCGAGTCCCGTGGTGTTTGGGCTAGTCGGTTGGATGCTCGGTTGTGGTTTGGGTTTTGGCAAAGTGTTGGTTGGTTGTGTGTTTCCTTTGGGATTCGAGCCCGAGCCCTTAGTGTTGCTTTGGGAGTTGGATTTAAGTGAGTTTGATTGATTGGAAAAGATTGCTTCGGTCGGGTCTCGAAGGAGGAAGCCGGGAAATGGGATTTTGAGGTTTTAAGTGGATAAGGATGGAAAATGGAATTAAAAATCCCATTTTTTCCCTTTTTTCCCTTTTTCCTTTTTATTTCCCTTTTTTCTTTTATTTTTCCCCAAATTCATTTTTTTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCGAGCCCCCCACCTAGCCCGACCCAGCCCCTTGGCTCGCCCAAGCCCAGCCCCATCCCGAGCAGCCCAGCGCCTAGCCCGAGCTAGTCCGGCCCCAGCCCGCGCGCGCCCTCGCCCAGCCCGAGCTCGCCCTGCCCAGGTCATGCCATCGCCAGCCCCAGCTCGCCCGAGTCGCCAGGCTGCGTGCCTCGCTCGCCAAACCGGCGCGTCGCGCGCCTGCCTCGGTCCGTGTCGCCCGGTGCGCCTTTAGATTGCCGAAGCCGCGCCGACGATGCGCGTCGCGAGCCCCCGCGTCGTGTCGCTCACACCCGCGCGCCGTCCCCTGTGTCGAGCCGCGCCGCGCGCCGTCGCCCAGCCGAGCAAGCGCCCGCGTCCGCGCGCCCAGCCGAGCAAGCGCCCGCGCCCGCCCGCCCAGCGTCGCCGCGCTCTAGCGCCGAGCCAGCGCCCCAGCGCGCCCACCCGGCCTTTGGGTCGCTTAGGTGTCTGGCAATGCTCGTTCAGCGTGTCGGCCGCGCCTCGTGAGTTGCTCCTGAGCCGAGCCCTGTTTATTTTAGTTTATTTAGGGCTATTTATGATTATTGATGTGTTTGCTTGGCTCGTTATAGGTTGTTCGGGTTCGATCGTAGTTATTTTTATTGTGTGTTGTTGCCTTCCGACCAGGTAAGGATTTCTTACCAGAGTTGTGTGGGCCTGCGATATTTTCATGATTATGCCTTGCTTGTTTCTTTGTTGTTATGAGCATGATAATAATAGAGCGACTTTGATTGTTTTCTCTAGCATGTTTGCTTGATATTACATGTTAGTGCCATGCTGCTAGGTTTGTTCTCACGGCATGCTTGTGATTCTGCTAAGCACGTAGTATCGTGCTAGGTAGTGTGATTGATGTCGGTCTTTGCTTGCTAGCCAGGAATCATTGCTTTTTCTCTGTACTCTTAGATAGAGTTGTAGGGTTTGTCATCATCCAGAGGTTGAGCGGACATAACGTACTTTGTCCCCAGTAGCTCAGGTCGGGAGTAAAGTGTGCGAAGCATAACGTATCTTGCTACCCCCCCCCCCAACCCGCCGGTTGTGGAATTAGCTACCCACTTCGGCATAGCATAGTTTGTAGCTTTGCTAGAGCGGAACCACGCTTAGCGGTGTAAGCCTACCTTGGGCGGTTCTTAGCTTCGTGTCGGTGGATCAGCCGCACGATGAGCGGCCGAGGGCCTCGCGCTACTGTGATCAGTGACACCGTTTCCGAGTCATAGGCATGTGCACCTGGCCCGCGTAGTTTGCCATTAGGCCCTCGCATTTACGCCGGTTGCAGAGGAGCATGCGGTGTGCGCGCGCACACAGCGTTAGTTGCCGGTTCGGAGAGAGCTCCCGGGCTAATGTCGTGAGTACACCATTCCTTCCGTTAGAGCGACTTGGGTACTCTCCGTATGTCCAGATTAGTGCAAGGGCAAGGAGGCCCTTGAGGACATTCTTGGGATCGGTGTATTCCCCGAGTGACAGATACCTCGGTGATGTCGAGATTGGTCGATGTGTATCCAATCCCAAATGCTAGGCCGGAAGAAGAGACTTCCGATGACTCGGATCTTGTTTTATGAGCTCGTTGGGCCATGATCGTGTTGGTAGTTGTTTGCTTGCATGCTTTGGTACTAGATGACCGATTATATCGTATTGTACCCCTTCCTGGTTGGGGATTCTTCTTGAGTAATTCGTTACTCACCCTTATTTCTGGGGTTTTTCCACAGGTATCCATGGTGCGAGACAGGATGGCTGGAGGAGGAGCTGTGATCATGGAAAACCCGTTGTTCAACTCTGAGTTTTATGTTTATGATTTAAATGTTCTCTGAATGCATGTAGTTGGGCACGGAGCCCTAGGGTATTTTCTGAATGTATTTCCGGATTCTAGCATTGTTGTAAAGTTTGTATGTTTTAAATAAATCTCTGATCGGAGTAAGCTTTGTAAATGTATTTGTCTTGGAACAGTTGCTTGGAAACAGGGACAGGTTTCAGGAATTGATGTTGATTTTAAATGGATGTTTTATGTTTGAGTTTTTACTTAGAATCCGAACACCATCTTGCAAATTTTCTGTAGATTTGTATGCATGCATTGAGGTAACGGCGTATTTAGAACCCCATTCGGGTCGGGTCGTTACAATACATCCTGAAGGGAATCAAGCCTCGCACCTTTGAGGAGCTGGCCACCCGAGCTCATGATATGGAGTTGAGCATTGACGCAAAGGGAAACAAAGATTCTCTGGTCTTAGAAACCCGTAAGGAAAAGAAGGATTTCAAGCCCACAGAAAAAGTTACAAAAAATGTGGCAAAGGATTCAATGACCATCGGTGCAACTCCATTTAAGTTTTCCTCAAAAGAAAAGGAAACAAAAGCTGAGAAACGACCAGTTGTAGAGCAACGACGTCGCCTAACGCTTCAGGAAAGACAAGAAAAATTCTATCCACTCCCAGACTCTGATGTTGCTGACATGTTAGAGCAACTGCTAGAAGAAAAACTCATCCAGTTTCCCGAATGCAAGCGTCCCGAGGAGTTAGGCAAGGTAAATGGTCCTAACTACTGTAAATACCATCGCGTTGTCAGCCATCCCATCGAGAAATGCTTCGTTCTGAAAGAGTTGATTCTGAGATTGGCTAGAGAAAAGAAAATTGAGCTGGACTTAGAGGAAGTAGCTCAATCAAATCATGTCGTTGTGGTTCTTCAACCTAAAATACAACCGCTCAAGGGTGCAACACTGTGTTGGTCTCGATACTTGATTCAATTCGGCTCCCTTGAGCCAGTTTTTGTTCAATGTCAAAGGAGATCCTCGGACCACAACCTTCAGGCAGAAAATCGACAAGCTCCCATCCAAGAAAGATGTATTTTAGAGCCAACCGTAGATGAGAATGAAGGTTGGACTGTTGTAACCCGTCGCAGGAAACAAAAACAAACTTATGCTCAGAAAGAGTCACGCAGATTTGAAGAGTCGAAGAGGAAGAGATTGCCTAAGAAACGAGGCAAAAGATGTGTAAGGAAATCTAAGCCCATTATACAGGAGAACGAGGATTTTCTACGAGCACATCATGCTATAACGTTGGCTGATTTCATCCCGAAGGAATTTTTGCGTGAAGGAAAAGATGAAGTGATAGACATTGCTACATGTCATGCAGTTTGCACAAGTGATGACTCAGCGAGCTCTTCAAAAGCTGTCATTGAGCCTAAAGCTACGTCTTCCTTTAACATAGAGGATTTGACATCACTCCCTCAAGCAGACAAAAGCTCTCTTATTGAGGCATTGTTAGACTCAAATAGCGAAGACGTTAAAATACATGCAATTGGGGCACACGGTTCGACGTGCATGTCCATAAGTTTCACGGACGATGATCTGTTGTTGGGATCAAAGCCTCACAACAGCCCTTTGTACGTCTCGGGCTATATACGAGAGCAAAGAGTTGGACGAATCCTCATTGATAATGGGTCGGCTGTCAACATAATGCCAAAGGTAACCTTGAAGCAACTAGGCATCTCCATGGAAGAGCTTTCTGACAGCAAGTTATTAATCCAAGGCTTCAACCAAGGCGGACAACGGGCGATTGGCATGATACGGCTTGAGGTCATCATTTGGCGAGCTGAGTGCAGATGCTTTGTTCCATGTTATAGATTGTAAGACAACATATCGACTACTATTGAGACGACCCTGGATTCATGAAAACCGAGTTGTTACTTCCTCGTTGCATCAATGCTTTAAGTTTTACCAAGACGGGGTTACGAAAGTAGAAGCTGACACAAATCCGTTCTTGGAGGCCGAGTCTCATTTCGCTGATGCAAAATTCTAAGCAAAGAACGAGACTGTGGAGAAAACAGTGCCACATGAGGTCCCTGCGATAAAAGAGAGTGAAAAAGCTAAGCTAAAACCAGAGGCCGACATAAAAAAGAAATGGGTAGTGAGAGAAGAAAAGTCATGCCTAGTAAAGATAGAGGCTTCAACGAGTCTAGTAGCTTCTAAGGCTCTAAAAGATGAGAAACTTCCAACTTCACCCATCTTATGCTATGTCCCTATATCCCGACGAAAAAAGGGTGAAGCACCTTTCACCGAATGTTCTAAAAATTTGAAAGTAGGTGATATTGAAGTATTGAGGGAAAGTTTCACCACTCCTTTGACAAAGATGAAAAAGCAATGGAGTCAGAGGAGCGAAGGAGATGAGAAGAATGTGGCTTTGCCTGAGAAGCGGACAAAGGATGGATTTGACCCCAATGCGTCTGATCGCTAGCTAAAGCGGGTATGATTTCACGACACATCACCGAGTTCAAACGCTTAAGTATATTTGATGACCAAGCGAGCTTTCTTGACGCAAAAGAAGTCACATTGAAGAAAGGTTACGCTCTACCAACGTCAAGAAAAGGACTCGGATATAAGTCATCTGAACCAGTTCGCATAACAAGAAGAGAGAAGGCAAAGGTGGAAGATGCCAACCACATAACCATTGAAGAGGTTGAAGAATCAAAGGAAAATAAGAATGTTGGTCATTGGGTACCTGCCTTTAAACGCATTGGACCATCAACATCTCGTGTTTCAGCGTTTCAAAGGTTAGGTACGTCAAAAAGAAAAGAGAATAAAATGCCTGCTACCACCAATGAGACACAATTACCTATTTTTGAAAGATTGAATAAAGCCATGGGAGAGGCGAGAACATTCTCGACTTCAGGTGGAGCACGACCATCCGCCTTTCAAAGGTTAATTAAGCCGAAAAGAAAAATAGAAAATACAAGTCCAACTACTGATAAGATCCGACCGTCGGCTTTTTAA

mRNA sequence

ATGTCTGGAAAAGCCACATCAAAGACCAGCAATGGACCTCAAGTAACACCATATGCGATAGCAAAAAGAATTGTAGGACTACTAGAGGGGACCTCTGATGAAATCACCGTCAAAGATAACCCATTGTTTGACCAAGTCAGTCCTAGCGTTGATCAACCAAAGGAGACGTCTAATCCTGATGTGATGTCTGTTATGATGGCTGGAAAAGATGAAGTGATAGACATTGCTACATGTCATGCAGTTTGCACAAGTGATGACTCAGCGAGCTCTTCAAAAGCTGTCATTGAGCCTAAAGCTACGTCTTCCTTTAACATAGAGGATTTGACATCACTCCCTCAAGCAGACAAAAGCTCTCTTATTGAGGCATTGTTAGACTCAAATACTAAGCTAAAACCAGAGGCCGACATAAAAAAGAAATGGGTAGTGAGAGAAGAAAAGTCATGCCTAGTAAAGATAGAGGCTTCAACGAGTCTAGTAGCTTCTAAGGCTCTAAAAGATGAGAAACTTCCAACTTCACCCATCTTATGCTATGTCCCTATATCCCGACGAAAAAAGGGTGAAGCACCTTTCACCGAATGTTCTAAAAATTTGAAAGTAGGTGATATTGAAGTATTGAGGGAAAGTTTCACCACTCCTTTGACAAAGATGAAAAAGCAATGGATCACATTGAAGAAAGGTTACGCTCTACCAACGTCAAGAAAAGGACTCGGATATAAGTCATCTGAACCAGTTCGCATAACAAGAAGAGAGAAGGCAAAGGTGGAAGATGCCAACCACATAACCATTGAAGAGGTTGAAGAATCAAAGGAAAATAAGAATGTTGGTCATTGGGTACCTGCCTTTAAACGCATTGGACCATCAACATCTCGTGTTTCAGCGTTTCAAAGGTTAGGTACGTCAAAAAGAAAAGAGAATAAAATGCCTGCTACCACCAATGAGACACAATTACCTATTTTTGAAAGATTGAATAAAGCCATGGGAGAGGCGAGAACATTCTCGACTTCAGGTGGAGCACGACCATCCGCCTTTCAAAGGTTAATTAAGCCGAAAAGAAAAATAGAAAATACAAGTCCAACTACTGATAAGATCCGACCGTCGGCTTTTTAA

Coding sequence (CDS)

ATGTCTGGAAAAGCCACATCAAAGACCAGCAATGGACCTCAAGTAACACCATATGCGATAGCAAAAAGAATTGTAGGACTACTAGAGGGGACCTCTGATGAAATCACCGTCAAAGATAACCCATTGTTTGACCAAGTCAGTCCTAGCGTTGATCAACCAAAGGAGACGTCTAATCCTGATGTGATGTCTGTTATGATGGCTGGAAAAGATGAAGTGATAGACATTGCTACATGTCATGCAGTTTGCACAAGTGATGACTCAGCGAGCTCTTCAAAAGCTGTCATTGAGCCTAAAGCTACGTCTTCCTTTAACATAGAGGATTTGACATCACTCCCTCAAGCAGACAAAAGCTCTCTTATTGAGGCATTGTTAGACTCAAATACTAAGCTAAAACCAGAGGCCGACATAAAAAAGAAATGGGTAGTGAGAGAAGAAAAGTCATGCCTAGTAAAGATAGAGGCTTCAACGAGTCTAGTAGCTTCTAAGGCTCTAAAAGATGAGAAACTTCCAACTTCACCCATCTTATGCTATGTCCCTATATCCCGACGAAAAAAGGGTGAAGCACCTTTCACCGAATGTTCTAAAAATTTGAAAGTAGGTGATATTGAAGTATTGAGGGAAAGTTTCACCACTCCTTTGACAAAGATGAAAAAGCAATGGATCACATTGAAGAAAGGTTACGCTCTACCAACGTCAAGAAAAGGACTCGGATATAAGTCATCTGAACCAGTTCGCATAACAAGAAGAGAGAAGGCAAAGGTGGAAGATGCCAACCACATAACCATTGAAGAGGTTGAAGAATCAAAGGAAAATAAGAATGTTGGTCATTGGGTACCTGCCTTTAAACGCATTGGACCATCAACATCTCGTGTTTCAGCGTTTCAAAGGTTAGGTACGTCAAAAAGAAAAGAGAATAAAATGCCTGCTACCACCAATGAGACACAATTACCTATTTTTGAAAGATTGAATAAAGCCATGGGAGAGGCGAGAACATTCTCGACTTCAGGTGGAGCACGACCATCCGCCTTTCAAAGGTTAATTAAGCCGAAAAGAAAAATAGAAAATACAAGTCCAACTACTGATAAGATCCGACCGTCGGCTTTTTAA

Protein sequence

MSGKATSKTSNGPQVTPYAIAKRIVGLLEGTSDEITVKDNPLFDQVSPSVDQPKETSNPDVMSVMMAGKDEVIDIATCHAVCTSDDSASSSKAVIEPKATSSFNIEDLTSLPQADKSSLIEALLDSNTKLKPEADIKKKWVVREEKSCLVKIEASTSLVASKALKDEKLPTSPILCYVPISRRKKGEAPFTECSKNLKVGDIEVLRESFTTPLTKMKKQWITLKKGYALPTSRKGLGYKSSEPVRITRREKAKVEDANHITIEEVEESKENKNVGHWVPAFKRIGPSTSRVSAFQRLGTSKRKENKMPATTNETQLPIFERLNKAMGEARTFSTSGGARPSAFQRLIKPKRKIENTSPTTDKIRPSAF

Homology

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BLAST of Sed0003002 vs. NCBI nr
Match: KAA0051585.1 (uncharacterized protein E6C27_scaffold174G001280 [Cucumis melo var. makuwa])

HSP 1 Score: 151.8 bits (382), Expect = 1.2e-32
Identity = 101/273 (37.00%), Postives = 138/273 (50.55%), Query Frame = 0


Query: 151 KIEASTSLVASKALKDEKLPTSPILCYVPISRRKKGEAPFTECSKNLKVGDIEVLRESFT 210
           K EAST+   S  L DEK    PIL YVP+SRRKKGE+PF E  + LKVG+IEVL+ESFT
Sbjct: 311 KSEASTNTAKSVILMDEKTSNPPILRYVPLSRRKKGESPFVESPQGLKVGEIEVLKESFT 370

Query: 211 TPLTKMKKQWI------------------------------------------------- 270
           TPLTK+ KQ I                                                 
Sbjct: 371 TPLTKITKQEIKIDLTEASLPQRRTKDGFDPKAYKLMAKAGYDFTTHTEFKSLKIYEQPK 430

Query: 271 -------TLKKGYALPTSRKGLGYKSSEPVRITRREKAKVEDANHITIEEVEESKENKNV 330
                   L++G+ +P SRKGLGYKS EP+RITR+ K KV D+NHIT++E +  +E +  
Sbjct: 431 LSSTQKKLLREGHVIPMSRKGLGYKSPEPIRITRKGKEKVVDSNHITLKEADSMEEKEGD 490

Query: 331 GHWVPAFKRIGPSTSRVSAFQRLGTSKRKENKMPATTNETQLPIFERLNKAMGEARTF-S 365
                AF RI P  +R   F++L  ++ +     +T+N  +   F+RL     E +    
Sbjct: 491 SQRTSAFDRISPHVARAPVFEKLSMTEAERKDHQSTSNLDRRSAFQRLTITFKEEKGICQ 550

[Close]

BLAST of Sed0003002 vs. NCBI nr
Match: KAA0042067.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK18009.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 149.8 bits (377), Expect = 4.5e-32
Identity = 101/260 (38.85%), Postives = 132/260 (50.77%), Query Frame = 0


Query: 153 EASTSLVASKALKDEKLPTSPILCYVPISRRKKGEAPFTECSKNLKVGDIEVLRESFTTP 212
           +ASTS   S  L DEK    PIL YVP+SR KKGE+PF +  + LKVGDIEVL+ESFTTP
Sbjct: 724 KASTSTRKSMILMDEKTSNPPILRYVPLSRCKKGESPFVKSPQGLKVGDIEVLKESFTTP 783

Query: 213 LTKMKKQWI--------------------------------------------------- 272
            TK+ KQ I                                                   
Sbjct: 784 FTKITKQEIKIDLTEASLPQSWTKDGFDPKAYKLMAKVGYDFTTHIEFKSLKIHEQPKLS 843

Query: 273 -----TLKKGYALPTSRKGLGYKSSEPVRITRREKAKVEDANHITIEEVEESKENKNVGH 332
                 L++G+A+P SRKGLGYKS EP+RITR+ K KV D NHIT++EV+  KE +  G 
Sbjct: 844 STQKKLLREGHAIPMSRKGLGYKSPEPIRITRKGKEKVVDNNHITVKEVDSMKEKEGDGQ 903

Query: 333 WVPAFKRIGPSTSRVSAFQRLGTSKRKENKMPATTNETQLPIFERL----NKAMGEARTF 353
              AF RI P  +R   F+RL  ++ +     +T+N  +   F+RL     K  G  + +
Sbjct: 904 RTSAFDRISPHVARTPVFERLSMTEVERKDHQSTSNLDRRSAFQRLTMTSKKEKGICQAW 963

[Close]

BLAST of Sed0003002 vs. NCBI nr
Match: KAA0062018.1 (uncharacterized protein E6C27_scaffold89G003490 [Cucumis melo var. makuwa])

HSP 1 Score: 148.7 bits (374), Expect = 1.0e-31
Identity = 92/229 (40.17%), Postives = 118/229 (51.53%), Query Frame = 0


Query: 151 KIEASTSLVASKALKDEKLPTSPILCYVPISRRKKGEAPFTECSKNLKVGDIEVLRESFT 210
           K EASTS   S  L DEK    PILCYVP+SRRKKGE+PF E S+ LKVGDIEVL+ESFT
Sbjct: 236 KSEASTSTAKSVILMDEKTSNPPILCYVPLSRRKKGESPFVESSQGLKVGDIEVLKESFT 295

Query: 211 TPLTKMKKQWI------------------------------------------------- 270
           TPLTK+ KQ I                                                 
Sbjct: 296 TPLTKITKQEIKIDLTEASLPKRRTKDEFDPKAYKLMAKAGYDFTTHTEFKSLKIHEQPK 355

Query: 271 -------TLKKGYALPTSRKGLGYKSSEPVRITRREKAKVEDANHITIEEVEESKENKNV 324
                   L++G+A+P SRKGLGYK  EP+RITR+ K K+ D+NHI ++EV+  +E +  
Sbjct: 356 ISSTQKKLLREGHAIPMSRKGLGYKLPEPIRITRKGKEKMVDSNHIIVKEVDSMEEKEGD 415

[Close]

BLAST of Sed0003002 vs. NCBI nr
Match: XP_031737045.1 (uncharacterized protein LOC116402134 [Cucumis sativus])

HSP 1 Score: 146.0 bits (367), Expect = 6.5e-31
Identity = 95/259 (36.68%), Postives = 129/259 (49.81%), Query Frame = 0


Query: 151 KIEASTSLVASKALKDEKLPTSPILCYVPISRRKKGEAPFTECSKNLKVGDIEVLRESFT 210
           K EA TS      LKDE    +P+L YVP+SRRKKGE+PF E  K LKVGDIE+++ESFT
Sbjct: 306 KGEAYTSSTKGMILKDENAANTPVLRYVPLSRRKKGESPFMESPKGLKVGDIEIIKESFT 365

Query: 211 TPLTKMKKQWI------------------------------------------------- 270
           TPLTK+ KQ +                                                 
Sbjct: 366 TPLTKIAKQEVKVDLVEANLPQRRTKDGFDPKAYKLMAKAGYDFTAHTEFKSLEIHDRPE 425

Query: 271 -------TLKKGYALPTSRKGLGYKSSEPVRITRREKAKVEDANHITIEEVEESKENKNV 330
                   L++G+++P SRKGLGYKS EP+RIT++ K KV D NHITIEE + +   +  
Sbjct: 426 LSSTQKKLLREGHSIPVSRKGLGYKSPEPIRITKKGKEKVVDINHITIEEDDNTDVKEGD 485

Query: 331 GHWVPAFKRIGPSTSRVSAFQRLGTSKRKENKMPATTNETQLPIFERLNKA-MGEARTFS 353
              +  F RI PS +R   F+RL  ++ +  ++ +  N  +  +F RL    + E  T  
Sbjct: 486 NQRISVFDRIRPSVARPVVFERLSMTEAERERLQSVPNLERHSVFRRLTTTPIKEESTCH 545

[Close]

BLAST of Sed0003002 vs. NCBI nr
Match: XP_031739134.1 (uncharacterized protein LOC116402863 [Cucumis sativus])

HSP 1 Score: 146.0 bits (367), Expect = 6.5e-31
Identity = 95/259 (36.68%), Postives = 129/259 (49.81%), Query Frame = 0


Query: 151  KIEASTSLVASKALKDEKLPTSPILCYVPISRRKKGEAPFTECSKNLKVGDIEVLRESFT 210
            K EA TS      LKDE    +P+L YVP+SRRKKGE+PF E  K LKVGDIE+++ESFT
Sbjct: 931  KGEAYTSSTKGMILKDENAANTPVLRYVPLSRRKKGESPFMESPKGLKVGDIEIIKESFT 990

Query: 211  TPLTKMKKQWI------------------------------------------------- 270
            TPLTK+ KQ +                                                 
Sbjct: 991  TPLTKIAKQEVKVDLVEANLPQRRTKDGFDPKAYKLMAKAGYDFTAHTEFKSLEIHDRPE 1050

Query: 271  -------TLKKGYALPTSRKGLGYKSSEPVRITRREKAKVEDANHITIEEVEESKENKNV 330
                    L++G+++P SRKGLGYKS EP+RIT++ K KV D NHITIEE + +   +  
Sbjct: 1051 LSSTQKKLLREGHSIPVSRKGLGYKSPEPIRITKKGKEKVVDINHITIEEDDNTDVKEGD 1110

Query: 331  GHWVPAFKRIGPSTSRVSAFQRLGTSKRKENKMPATTNETQLPIFERLNKA-MGEARTFS 353
               +  F RI PS +R   F+RL  ++ +  ++ +  N  +  +F RL    + E  T  
Sbjct: 1111 NQRISVFDRIRPSVARPVVFERLSMTEAERERLQSVPNLERHSVFRRLTTTPIKEESTCH 1170

[Close]

BLAST of Sed0003002 vs. ExPASy TrEMBL
Match: A0A5A7UD46 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G001280 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 5.8e-33
Identity = 101/273 (37.00%), Postives = 138/273 (50.55%), Query Frame = 0


Query: 151 KIEASTSLVASKALKDEKLPTSPILCYVPISRRKKGEAPFTECSKNLKVGDIEVLRESFT 210
           K EAST+   S  L DEK    PIL YVP+SRRKKGE+PF E  + LKVG+IEVL+ESFT
Sbjct: 311 KSEASTNTAKSVILMDEKTSNPPILRYVPLSRRKKGESPFVESPQGLKVGEIEVLKESFT 370

Query: 211 TPLTKMKKQWI------------------------------------------------- 270
           TPLTK+ KQ I                                                 
Sbjct: 371 TPLTKITKQEIKIDLTEASLPQRRTKDGFDPKAYKLMAKAGYDFTTHTEFKSLKIYEQPK 430

Query: 271 -------TLKKGYALPTSRKGLGYKSSEPVRITRREKAKVEDANHITIEEVEESKENKNV 330
                   L++G+ +P SRKGLGYKS EP+RITR+ K KV D+NHIT++E +  +E +  
Sbjct: 431 LSSTQKKLLREGHVIPMSRKGLGYKSPEPIRITRKGKEKVVDSNHITLKEADSMEEKEGD 490

Query: 331 GHWVPAFKRIGPSTSRVSAFQRLGTSKRKENKMPATTNETQLPIFERLNKAMGEARTF-S 365
                AF RI P  +R   F++L  ++ +     +T+N  +   F+RL     E +    
Sbjct: 491 SQRTSAFDRISPHVARAPVFEKLSMTEAERKDHQSTSNLDRRSAFQRLTITFKEEKGICQ 550

[Close]

BLAST of Sed0003002 vs. ExPASy TrEMBL
Match: A0A5A7TJZ7 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G003220 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.2e-32
Identity = 101/260 (38.85%), Postives = 132/260 (50.77%), Query Frame = 0


Query: 153 EASTSLVASKALKDEKLPTSPILCYVPISRRKKGEAPFTECSKNLKVGDIEVLRESFTTP 212
           +ASTS   S  L DEK    PIL YVP+SR KKGE+PF +  + LKVGDIEVL+ESFTTP
Sbjct: 724 KASTSTRKSMILMDEKTSNPPILRYVPLSRCKKGESPFVKSPQGLKVGDIEVLKESFTTP 783

Query: 213 LTKMKKQWI--------------------------------------------------- 272
            TK+ KQ I                                                   
Sbjct: 784 FTKITKQEIKIDLTEASLPQSWTKDGFDPKAYKLMAKVGYDFTTHIEFKSLKIHEQPKLS 843

Query: 273 -----TLKKGYALPTSRKGLGYKSSEPVRITRREKAKVEDANHITIEEVEESKENKNVGH 332
                 L++G+A+P SRKGLGYKS EP+RITR+ K KV D NHIT++EV+  KE +  G 
Sbjct: 844 STQKKLLREGHAIPMSRKGLGYKSPEPIRITRKGKEKVVDNNHITVKEVDSMKEKEGDGQ 903

Query: 333 WVPAFKRIGPSTSRVSAFQRLGTSKRKENKMPATTNETQLPIFERL----NKAMGEARTF 353
              AF RI P  +R   F+RL  ++ +     +T+N  +   F+RL     K  G  + +
Sbjct: 904 RTSAFDRISPHVARTPVFERLSMTEVERKDHQSTSNLDRRSAFQRLTMTSKKEKGICQAW 963

[Close]

BLAST of Sed0003002 vs. ExPASy TrEMBL
Match: A0A5A7V356 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G003490 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 4.9e-32
Identity = 92/229 (40.17%), Postives = 118/229 (51.53%), Query Frame = 0


Query: 151 KIEASTSLVASKALKDEKLPTSPILCYVPISRRKKGEAPFTECSKNLKVGDIEVLRESFT 210
           K EASTS   S  L DEK    PILCYVP+SRRKKGE+PF E S+ LKVGDIEVL+ESFT
Sbjct: 236 KSEASTSTAKSVILMDEKTSNPPILCYVPLSRRKKGESPFVESSQGLKVGDIEVLKESFT 295

Query: 211 TPLTKMKKQWI------------------------------------------------- 270
           TPLTK+ KQ I                                                 
Sbjct: 296 TPLTKITKQEIKIDLTEASLPKRRTKDEFDPKAYKLMAKAGYDFTTHTEFKSLKIHEQPK 355

Query: 271 -------TLKKGYALPTSRKGLGYKSSEPVRITRREKAKVEDANHITIEEVEESKENKNV 324
                   L++G+A+P SRKGLGYK  EP+RITR+ K K+ D+NHI ++EV+  +E +  
Sbjct: 356 ISSTQKKLLREGHAIPMSRKGLGYKLPEPIRITRKGKEKMVDSNHIIVKEVDSMEEKEGD 415

[Close]

BLAST of Sed0003002 vs. ExPASy TrEMBL
Match: A0A5D3C0W6 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G002360 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.2e-30
Identity = 91/229 (39.74%), Postives = 117/229 (51.09%), Query Frame = 0


Query: 151 KIEASTSLVASKALKDEKLPTSPILCYVPISRRKKGEAPFTECSKNLKVGDIEVLRESFT 210
           K EASTS   S  L DEK     IL YVP+SRRKKGE+PF E  + LKVGDIEVL+ESFT
Sbjct: 678 KSEASTSTAKSVILMDEKTSNPSILRYVPLSRRKKGESPFVESPQGLKVGDIEVLKESFT 737

Query: 211 TPLTKMKKQWI------------------------------------------------- 270
           TPLTK+ KQ I                                                 
Sbjct: 738 TPLTKITKQEIKIDLTEASLPQRRTKDEFDPKAYKLMAKAGYDFTTHTEFKSLKIHEQPK 797

Query: 271 -------TLKKGYALPTSRKGLGYKSSEPVRITRREKAKVEDANHITIEEVEESKENKNV 324
                   L++G+A+P SRKGLGYK  EP+RITR+ K K+ D+NHIT++EV+  KE +  
Sbjct: 798 LSSTQKKLLREGHAIPMSRKGLGYKLPEPIRITRKGKEKMVDSNHITVKEVDSMKEKEGD 857

[Close]

BLAST of Sed0003002 vs. ExPASy TrEMBL
Match: A0A5D3C8N8 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G001250 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.0e-30
Identity = 90/207 (43.48%), Postives = 116/207 (56.04%), Query Frame = 0


Query: 151 KIEASTSLVASKALKDEKLPTSPILCYVPISRRKKGEAPFTECSKNLKVGDIEVLRESFT 210
           K EASTS   S  L +E     PIL YVP+SR KKGE+PF E  + LKVGDIEVL+ESFT
Sbjct: 704 KNEASTSTAKSVILMNENTSNPPILRYVPLSRCKKGESPFVESPQGLKVGDIEVLKESFT 763

Query: 211 TPLTKMKKQWITLKKGYALPTSRKGLGYKSSEPVRITRREKAKVEDANHITIEEVEESKE 270
             LTK+ K               KGLGYKS EP+RITR+ K KV D+NHIT++EV+  + 
Sbjct: 764 IQLTKITK---------------KGLGYKSPEPIRITRKGKEKVVDSNHITVKEVDSMEG 823

Query: 271 NKNVGHWVPAFKRIGPSTSRVSAFQRLGTSKRKENKMPATTNETQLPIFERLNKAMGEAR 330
            +       AF RI P  +R   F+RL  ++ K     +T+N  +   F+RL     E +
Sbjct: 824 KEGHSQRTSAFDRISPHVARAPVFERLSMTEAKRKDHQSTSNLDRRSAFQRLTITFKEEK 883

Query: 331 TF-STSGGARPSAFQRLIKPKRKIENT 357
                S   +PSAF+RL   K+K   T
Sbjct: 884 GICQASMTTKPSAFERLSITKKKNAQT 895

The following BLAST results are available for this feature:

BLAST of Sed0003002 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0051585.1	1.2e-32	37.00	uncharacterized protein E6C27_scaffold174G001280 [Cucumis melo var. makuwa]	[more]
KAA0042067.1	4.5e-32	38.85	retrotransposon gag protein [Cucumis melo var. makuwa] >TYK18009.1 retrotranspos...	[more]
KAA0062018.1	1.0e-31	40.17	uncharacterized protein E6C27_scaffold89G003490 [Cucumis melo var. makuwa]	[more]
XP_031737045.1	6.5e-31	36.68	uncharacterized protein LOC116402134 [Cucumis sativus]	[more]
XP_031739134.1	6.5e-31	36.68	uncharacterized protein LOC116402863 [Cucumis sativus]	[more]

BLAST of Sed0003002 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0003002 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UD46	5.8e-33	37.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TJZ7	2.2e-32	38.85	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5A7V356	4.9e-32	40.17	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3C0W6	1.2e-30	39.74	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3C8N8	2.0e-30	43.48	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G00125...	[more]

BLAST of Sed0003002 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 330..368

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0003002.1	Sed0003002.1	mRNA