Sed0002958 (gene) Chayote v1

Overview


Name	Sed0002958
Type	gene
Organism	Sechium edule (Chayote v1)
Description	ethylene-responsive transcription factor ERF011
Location	LG14: 17345118 .. 17346580 (-)
RNA-Seq Expression	Sed0002958
Synteny	Sed0002958

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAGAAAAAAGAAAAAGAAAAATCAACGTGGAGGGTAATTGAGAAGACAAACTCGGTGGCAAAGCAGGAGTAGTAGAAGAACACAAAGAAAGAAAGAAAGAAAGGGGAATGGAGGGTGCAAAACCCGAAGGCAAAGGCAAAGGCAAAGGCAAAGCAAAACCCGTTTCTCCCAATCCCCAATTTTCACACCCATAGCTCCACAATCATCGAATCCCCACTTTTCCCCCTTTTTATTTCTCATGAAGAAGAAGATTCAGATTCAGATTCCGATTGTGGGTTAGCCAAAGCCGAAGGAGATTAGCCATGGACGGCGGAGATCAGGGGACGAGAAAGAGAGGGGTGGGTGAGAATCAGAGGCCGTACAAGGGGATAAGGATGAGGAAGTGGGGGAAATGGGTGGCTGAGATTCGAGAGCCCAACAAGCGCTCTAGGATTTGGCTGGGCTCCTACTCTTCCCCCGTCGCCGCCGCCCGCGCCTACGACACCGCCGTCTTCTACCTCAGAGGCCCCTCTGCCCGCCTCAATTTCCCCGACCTCTTAGCCCGGGAGGACGGCCGCGGAGTCACCGCCCCCGACATGTCCGCCGCCTCCATCCGCAAGAAGGCCACCGAGGTCGGCGCCCGCGTCGACGCCCTCGAAACTTCCTTAGCCGCCCAACACGCATCCCCCTCTCCGCCCCAGATTAAACCCTGCGCCGCCTTCCTGGATCGGGTCGACTTGAACAAGTTACCCGACCCGGAAGACGATGACCAAGAACCCGAGTTCGACTGACATTCAATCCGCCGCCCCGAGGTATGTGACCGCCCATCATCTTCCATCTAGGGTTTTCTTTTTCTTTTCTTTTTTTAAATTATTATTTTTGTTATGAGTTTTTTTTTTTTAGCAAAAAGAATTTTGGCCCATGTAGAAATATTATGAATGAATGTACATTAAATTAGGAATCCAGTTATGATGATGATGATGATGATATTGAAATTCTTCCTTTGTTTAATTGGGAATCAATCGAGTTTACTAAATCCAAAAAGTAAAAGGAAAAAAAAAGAGGACTTCTTTTCCTCCACTTTGTTGACAAATTATGAGGGATGGAAGGGGAGATGAGAAATCAACGAGGAATTGAAAATTGAATTCCTCGAGAAAGGGAAGTAAAAAAAGAAGGAGAGGGAGGAGGGGGGCAACAAGGGCCTACAAAAAGCAACCCCTTGGGGGTGCTCTCTAACGACTAAAGTGATAAGATTTTGGTGAAGTTAGGTATTTTCTGATTCTCTACTGTTTCTTCATCATATAATTAATGATACCTCTGTCTCATGTTGTAACCATTTAAATCAATGGTCGAATTGCACGTATAATAATAAAGAAGTAATAGCGTACAGAGTTGTAATGGAATGCAATGCAATGGTCTGTTTGGTTCCCAAGTGGTGGTTGAGTTTTCGATGAATTAGTATTGTAATTAGCGAAGGA

mRNA sequence

AAAAAAAAGAAAAAAGAAAAAGAAAAATCAACGTGGAGGGTAATTGAGAAGACAAACTCGGTGGCAAAGCAGGAGTAGTAGAAGAACACAAAGAAAGAAAGAAAGAAAGGGGAATGGAGGGTGCAAAACCCGAAGGCAAAGGCAAAGGCAAAGGCAAAGCAAAACCCGTTTCTCCCAATCCCCAATTTTCACACCCATAGCTCCACAATCATCGAATCCCCACTTTTCCCCCTTTTTATTTCTCATGAAGAAGAAGATTCAGATTCAGATTCCGATTGTGGGTTAGCCAAAGCCGAAGGAGATTAGCCATGGACGGCGGAGATCAGGGGACGAGAAAGAGAGGGGTGGGTGAGAATCAGAGGCCGTACAAGGGGATAAGGATGAGGAAGTGGGGGAAATGGGTGGCTGAGATTCGAGAGCCCAACAAGCGCTCTAGGATTTGGCTGGGCTCCTACTCTTCCCCCGTCGCCGCCGCCCGCGCCTACGACACCGCCGTCTTCTACCTCAGAGGCCCCTCTGCCCGCCTCAATTTCCCCGACCTCTTAGCCCGGGAGGACGGCCGCGGAGTCACCGCCCCCGACATGTCCGCCGCCTCCATCCGCAAGAAGGCCACCGAGGTCGGCGCCCGCGTCGACGCCCTCGAAACTTCCTTAGCCGCCCAACACGCATCCCCCTCTCCGCCCCAGATTAAACCCTGCGCCGCCTTCCTGGATCGGGTCGACTTGAACAAGTTACCCGACCCGGAAGACGATGACCAAGAACCCGAGTTCGACTGACATTCAATCCGCCGCCCCGAGGTATGTGACCGCCCATCATCTTCCATCTAGGGTTTTCTTTTTCTTTTCTTTTTTTAAATTATTATTTTTGTTATGAGTTTTTTTTTTTTAGCAAAAAGAATTTTGGCCCATGTAGAAATATTATGAATGAATGTACATTAAATTAGGAATCCAGTTATGATGATGATGATGATGATATTGAAATTCTTCCTTTGTTTAATTGGGAATCAATCGAGTTTACTAAATCCAAAAAGTAAAAGGAAAAAAAAAGAGGACTTCTTTTCCTCCACTTTGTTGACAAATTATGAGGGATGGAAGGGGAGATGAGAAATCAACGAGGAATTGAAAATTGAATTCCTCGAGAAAGGGAAGTAAAAAAAGAAGGAGAGGGAGGAGGGGGGCAACAAGGGCCTACAAAAAGCAACCCCTTGGGGGTGCTCTCTAACGACTAAAGTGATAAGATTTTGGTGAAGTTAGGTATTTTCTGATTCTCTACTGTTTCTTCATCATATAATTAATGATACCTCTGTCTCATGTTGTAACCATTTAAATCAATGGTCGAATTGCACGTATAATAATAAAGAAGTAATAGCGTACAGAGTTGTAATGGAATGCAATGCAATGGTCTGTTTGGTTCCCAAGTGGTGGTTGAGTTTTCGATGAATTAGTATTGTAATTAGCGAAGGA

Coding sequence (CDS)

ATGGACGGCGGAGATCAGGGGACGAGAAAGAGAGGGGTGGGTGAGAATCAGAGGCCGTACAAGGGGATAAGGATGAGGAAGTGGGGGAAATGGGTGGCTGAGATTCGAGAGCCCAACAAGCGCTCTAGGATTTGGCTGGGCTCCTACTCTTCCCCCGTCGCCGCCGCCCGCGCCTACGACACCGCCGTCTTCTACCTCAGAGGCCCCTCTGCCCGCCTCAATTTCCCCGACCTCTTAGCCCGGGAGGACGGCCGCGGAGTCACCGCCCCCGACATGTCCGCCGCCTCCATCCGCAAGAAGGCCACCGAGGTCGGCGCCCGCGTCGACGCCCTCGAAACTTCCTTAGCCGCCCAACACGCATCCCCCTCTCCGCCCCAGATTAAACCCTGCGCCGCCTTCCTGGATCGGGTCGACTTGAACAAGTTACCCGACCCGGAAGACGATGACCAAGAACCCGAGTTCGACTGA

Protein sequence

MDGGDQGTRKRGVGENQRPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTAVFYLRGPSARLNFPDLLAREDGRGVTAPDMSAASIRKKATEVGARVDALETSLAAQHASPSPPQIKPCAAFLDRVDLNKLPDPEDDDQEPEFD

Homology

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BLAST of Sed0002958 vs. NCBI nr
Match: XP_004141907.1 (ethylene-responsive transcription factor ERF011 [Cucumis sativus] >KGN48539.1 hypothetical protein Csa_003418 [Cucumis sativus])

HSP 1 Score: 228.8 bits (582), Expect = 3.2e-56
Identity = 125/161 (77.64%), Postives = 136/161 (84.47%), Query Frame = 0


Query: 1   MDGG--DQGTRKRGVGENQRPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARA 60
           MDGG   + TRKR   +NQR YKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARA
Sbjct: 1   MDGGGVPEATRKRSALDNQRLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARA 60

Query: 61  YDTAVFYLRGPSARLNFPDLLAREDGRGVT--APDMSAASIRKKATEVGARVDALETSLA 120
           YDTAVFYLRGPSARLNFP+LLA E GRG+T  A DMSAASIRKKATEVGARVDALE+S+ 
Sbjct: 61  YDTAVFYLRGPSARLNFPELLAGE-GRGITAGAGDMSAASIRKKATEVGARVDALESSVG 120

Query: 121 AQ------HASPSPPQIKPCAAFLDRVDLNKLPDPEDDDQE 152
            Q      HAS SPP+ K C+ FLDRVDLNKLPDPE++D+E
Sbjct: 121 QQSRSHHSHASASPPETKGCSGFLDRVDLNKLPDPEEEDEE 160

[Close]

BLAST of Sed0002958 vs. NCBI nr
Match: XP_008440304.1 (PREDICTED: ethylene-responsive transcription factor ERF011 [Cucumis melo] >TYK12873.1 ethylene-responsive transcription factor ERF011 [Cucumis melo var. makuwa])

HSP 1 Score: 224.9 bits (572), Expect = 4.7e-55
Identity = 124/161 (77.02%), Postives = 134/161 (83.23%), Query Frame = 0


Query: 1   MDGG--DQGTRKRGVGENQRPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARA 60
           MDGG   + TRKR   +NQR YKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARA
Sbjct: 1   MDGGGVPEATRKRSGLDNQRLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARA 60

Query: 61  YDTAVFYLRGPSARLNFPDLLAREDGRGVT--APDMSAASIRKKATEVGARVDALETSLA 120
           YDTAVFYLRGPSARLNFP+LLA E GRG+T  A DMSAASIRKKATEVGARVDA E+SL 
Sbjct: 61  YDTAVFYLRGPSARLNFPELLAGE-GRGITAGAGDMSAASIRKKATEVGARVDAQESSLG 120

Query: 121 AQ------HASPSPPQIKPCAAFLDRVDLNKLPDPEDDDQE 152
            Q      H S SPP+ K C+ FLDRVDLNKLPDPE++D+E
Sbjct: 121 QQSRSHHSHTSASPPETKGCSGFLDRVDLNKLPDPEEEDEE 160

[Close]

BLAST of Sed0002958 vs. NCBI nr
Match: XP_038881276.1 (ethylene-responsive transcription factor ERF011-like [Benincasa hispida])

HSP 1 Score: 224.9 bits (572), Expect = 4.7e-55
Identity = 122/160 (76.25%), Postives = 135/160 (84.38%), Query Frame = 0


Query: 3   GGDQGTRKRGVGENQRPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTA 62
           GG + TRKRG+ +NQR YKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTA
Sbjct: 7   GGGEATRKRGL-DNQRLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTA 66

Query: 63  VFYLRGPSARLNFPDLLAREDGRGVT--APDMSAASIRKKATEVGARVDALETSLAA--- 122
           VFYLRGPSARLNFP+LLA E GRG++  A DMSAA+IRKKATEVGARVDALE+SL     
Sbjct: 67  VFYLRGPSARLNFPELLAGE-GRGISAGAGDMSAATIRKKATEVGARVDALESSLGQHSH 126

Query: 123 ------QHASPSPPQIKPCAAFLDRVDLNKLPDPEDDDQE 152
                  HAS SPP+ K C+ FLDRVDLNKLPDPE++D+E
Sbjct: 127 HNRNHHSHASASPPETKGCSGFLDRVDLNKLPDPEEEDEE 164

[Close]

BLAST of Sed0002958 vs. NCBI nr
Match: XP_022949762.1 (ethylene-responsive transcription factor RAP2-10-like [Cucurbita moschata] >KAG7034333.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 223.0 bits (567), Expect = 1.8e-54
Identity = 121/164 (73.78%), Postives = 135/164 (82.32%), Query Frame = 0


Query: 2   DGGDQGTRKRGVGENQRPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDT 61
           +GG +GTRKRGV  NQ+ YKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDT
Sbjct: 6   EGGREGTRKRGV-HNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDT 65

Query: 62  AVFYLRGPSARLNFPDLLAREDGRGVT---APDMSAASIRKKATEVGARVDALETSLA-- 121
           AV+YLRGPSARLNFP+LLA E GRG++     DMSAA+IRKKATEVGARVDALE+SL   
Sbjct: 66  AVYYLRGPSARLNFPELLAGE-GRGISGGGCGDMSAATIRKKATEVGARVDALESSLGHH 125

Query: 122 ---------AQHASPSPPQIKPCAAFLDRVDLNKLPDPEDDDQE 152
                      HAS SPP+ K C+ FLDR+DLNKLPDPE+DD+E
Sbjct: 126 QHNHNNRNHHSHASASPPETKACSGFLDRMDLNKLPDPEEDDEE 167

[Close]

BLAST of Sed0002958 vs. NCBI nr
Match: XP_022977600.1 (ethylene-responsive transcription factor RAP2-10-like [Cucurbita maxima])

HSP 1 Score: 223.0 bits (567), Expect = 1.8e-54
Identity = 121/164 (73.78%), Postives = 135/164 (82.32%), Query Frame = 0


Query: 2   DGGDQGTRKRGVGENQRPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDT 61
           +GG +GTRKRGV  NQ+ YKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDT
Sbjct: 6   EGGREGTRKRGV-HNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDT 65

Query: 62  AVFYLRGPSARLNFPDLLAREDGRGVT---APDMSAASIRKKATEVGARVDALETSLA-- 121
           A++YLRGPSARLNFPDLLA E GRG++     DMSAA+IRKKATEVGARVDALE+SL   
Sbjct: 66  ALYYLRGPSARLNFPDLLAGE-GRGISGGGCGDMSAATIRKKATEVGARVDALESSLGHH 125

Query: 122 ---------AQHASPSPPQIKPCAAFLDRVDLNKLPDPEDDDQE 152
                      HAS SPP+ K C+ FLDR+DLNKLPDPE+DD+E
Sbjct: 126 QHNHNNRNHHSHASASPPETKVCSGFLDRMDLNKLPDPEEDDEE 167

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BLAST of Sed0002958 vs. ExPASy Swiss-Prot
Match: Q9FH94 (Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana OX=3702 GN=ERF010 PE=2 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 5.2e-41
Identity = 99/177 (55.93%), Postives = 113/177 (63.84%), Query Frame = 0


Query: 7   GTRKRGVGENQRPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTAVFYL 66
           GTRKR      RPYKGIRMRKWGKWVAEIREPNKRSR+WLGSYS+P AAARAYDTAVFYL
Sbjct: 13  GTRKR-----DRPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYL 72

Query: 67  RGPSARLNFPDLLAREDGRGVTAPDMSAASIRKKATEVGARVDALETSL----------- 126
           RGP+ARLNFP+LL    G   +  DMSAA+IRKKATEVGA+VDAL T++           
Sbjct: 73  RGPTARLNFPELL---PGEKFSDEDMSAATIRKKATEVGAQVDALGTAVQNNRHRVFGQN 132

Query: 127 -------------------AAQHASPSPPQIKPCAAFLDRVDLNKLPDPEDDDQEPE 154
                                +       +++     LDRVDLNKLPDPE  D+E E
Sbjct: 133 RDSDVDNKNFHRNYQNGEREEEEEDEDDKRLRSGGRLLDRVDLNKLPDPESSDEEWE 181

[Close]

BLAST of Sed0002958 vs. ExPASy Swiss-Prot
Match: O22174 (Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana OX=3702 GN=ERF008 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.4e-40
Identity = 95/156 (60.90%), Postives = 112/156 (71.79%), Query Frame = 0


Query: 7   GTRKRGVGENQRPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTAVFYL 66
           GTRKR +    +PYKGIRMRKWGKWVAEIREPNKRSRIWLGSY++P AAARAYDTAVFYL
Sbjct: 19  GTRKRDL----KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYL 78

Query: 67  RGPSARLNFPDLLA--REDGRGVTAPDMSAASIRKKATEVGARVDALETSLAAQHASPSP 126
           RGPSARLNFP+LLA       G    D+SAA IR+KA EVGA+VDAL  ++       + 
Sbjct: 79  RGPSARLNFPELLAGLTVSNGGGRGGDLSAAYIRRKAAEVGAQVDALGATVVVNTGGENR 138

Query: 127 ---PQIKPCA----AFLDRVDLNKLPDPEDDDQEPE 154
               +I+ C       L+RVDLNKLPDPE+ D + +
Sbjct: 139 GDYEKIENCRKSGNGSLERVDLNKLPDPENSDGDDD 170

[Close]

BLAST of Sed0002958 vs. ExPASy Swiss-Prot
Match: Q9SW63 (Ethylene-responsive transcription factor RAP2-10 OS=Arabidopsis thaliana OX=3702 GN=RAP2-10 PE=2 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.7e-39
Identity = 103/179 (57.54%), Postives = 111/179 (62.01%), Query Frame = 0


Query: 8   TRKRGVGENQRPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTAVFYLR 67
           TRKR      +PYKGIRMRKWGKWVAEIREPNKRSRIWLGSYS+P AAARAYDTAVFYLR
Sbjct: 23  TRKR-----DKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPEAAARAYDTAVFYLR 82

Query: 68  GPSARLNFPDLLA-----REDGRGVT-APDMSAASIRKKATEVGARVDALETSLAA---- 127
           GPSARLNFP+LLA        G GV    DMSAA IR+KA EVGA+VDALE + A     
Sbjct: 83  GPSARLNFPELLAGVTVTGGGGGGVNGGGDMSAAYIRRKAAEVGAQVDALEAAGAGGNRH 142

Query: 128 ----QH---------------------ASPSPPQIKPCAAFLDRVDLNKLPDPEDDDQE 152
               QH                        S    K C   L+RVDLNKLPDPE  D +
Sbjct: 143 HHHHQHQRGNHDYVDNHSDYRINDDLMECSSKEGFKRCNGSLERVDLNKLPDPETSDDD 196

[Close]

BLAST of Sed0002958 vs. ExPASy Swiss-Prot
Match: Q8LC30 (Ethylene-responsive transcription factor RAP2-1 OS=Arabidopsis thaliana OX=3702 GN=RAP2-1 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.1e-38
Identity = 85/133 (63.91%), Postives = 99/133 (74.44%), Query Frame = 0


Query: 17  QRPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTAVFYLRGPSARLNFP 76
           ++PY+GIR RKWGKWVAEIREPNKRSR+WLGSY++ +AAARAYD AVFYLRGPSARLNFP
Sbjct: 28  RKPYRGIRRRKWGKWVAEIREPNKRSRLWLGSYTTDIAAARAYDVAVFYLRGPSARLNFP 87

Query: 77  DLLAREDGR--GVTAPDMSAASIRKKATEVGARVDALETSLAAQHASPSPPQIKPCAAFL 136
           DLL +E+      T  DM AA IR+KA EVGARVDAL  S A   A  +PP IKP     
Sbjct: 88  DLLLQEEDHLSAATTADMPAALIREKAAEVGARVDALLASAAPSMAHSTPPVIKP----- 147

Query: 137 DRVDLNKLPDPED 148
              DLN++P+  D
Sbjct: 148 ---DLNQIPESGD 152

[Close]

BLAST of Sed0002958 vs. ExPASy Swiss-Prot
Match: Q9SNE1 (Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana OX=3702 GN=ERF011 PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.4e-38
Identity = 89/139 (64.03%), Postives = 104/139 (74.82%), Query Frame = 0


Query: 15  ENQRPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTAVFYLRGPSARLN 74
           + +RP+KGIRMRKWGKWVAEIREPNKRSR+WLGSYS+P AAARAYDTAVFYLRGP+A LN
Sbjct: 16  KRERPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTATLN 75

Query: 75  FPDLLAREDGRGVTAPDMSAASIRKKATEVGARVDALETSLAAQHASPSPPQIKP--CAA 134
           FP+LL        +A DMSAA+IRKKATEVGA+VDA+  ++   +        K      
Sbjct: 76  FPELLP-----CTSAEDMSAATIRKKATEVGAQVDAIGATVVQNNKRRRVFSQKRDFGGG 135

Query: 135 FLDRVDLNKLPDPE--DDD 150
            L+ VDLNKLPDPE  DDD
Sbjct: 136 LLELVDLNKLPDPENLDDD 149

[Close]

BLAST of Sed0002958 vs. ExPASy TrEMBL
Match: A0A0A0KIC8 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G491030 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.6e-56
Identity = 125/161 (77.64%), Postives = 136/161 (84.47%), Query Frame = 0


Query: 1   MDGG--DQGTRKRGVGENQRPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARA 60
           MDGG   + TRKR   +NQR YKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARA
Sbjct: 1   MDGGGVPEATRKRSALDNQRLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARA 60

Query: 61  YDTAVFYLRGPSARLNFPDLLAREDGRGVT--APDMSAASIRKKATEVGARVDALETSLA 120
           YDTAVFYLRGPSARLNFP+LLA E GRG+T  A DMSAASIRKKATEVGARVDALE+S+ 
Sbjct: 61  YDTAVFYLRGPSARLNFPELLAGE-GRGITAGAGDMSAASIRKKATEVGARVDALESSVG 120

Query: 121 AQ------HASPSPPQIKPCAAFLDRVDLNKLPDPEDDDQE 152
            Q      HAS SPP+ K C+ FLDRVDLNKLPDPE++D+E
Sbjct: 121 QQSRSHHSHASASPPETKGCSGFLDRVDLNKLPDPEEEDEE 160

[Close]

BLAST of Sed0002958 vs. ExPASy TrEMBL
Match: A0A5D3CLU0 (Ethylene-responsive transcription factor ERF011 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004650 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 2.3e-55
Identity = 124/161 (77.02%), Postives = 134/161 (83.23%), Query Frame = 0


Query: 1   MDGG--DQGTRKRGVGENQRPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARA 60
           MDGG   + TRKR   +NQR YKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARA
Sbjct: 1   MDGGGVPEATRKRSGLDNQRLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARA 60

Query: 61  YDTAVFYLRGPSARLNFPDLLAREDGRGVT--APDMSAASIRKKATEVGARVDALETSLA 120
           YDTAVFYLRGPSARLNFP+LLA E GRG+T  A DMSAASIRKKATEVGARVDA E+SL 
Sbjct: 61  YDTAVFYLRGPSARLNFPELLAGE-GRGITAGAGDMSAASIRKKATEVGARVDAQESSLG 120

Query: 121 AQ------HASPSPPQIKPCAAFLDRVDLNKLPDPEDDDQE 152
            Q      H S SPP+ K C+ FLDRVDLNKLPDPE++D+E
Sbjct: 121 QQSRSHHSHTSASPPETKGCSGFLDRVDLNKLPDPEEEDEE 160

[Close]

BLAST of Sed0002958 vs. ExPASy TrEMBL
Match: A0A1S3B0U0 (ethylene-responsive transcription factor ERF011 OS=Cucumis melo OX=3656 GN=LOC103484790 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 2.3e-55
Identity = 124/161 (77.02%), Postives = 134/161 (83.23%), Query Frame = 0


Query: 1   MDGG--DQGTRKRGVGENQRPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARA 60
           MDGG   + TRKR   +NQR YKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARA
Sbjct: 1   MDGGGVPEATRKRSGLDNQRLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARA 60

Query: 61  YDTAVFYLRGPSARLNFPDLLAREDGRGVT--APDMSAASIRKKATEVGARVDALETSLA 120
           YDTAVFYLRGPSARLNFP+LLA E GRG+T  A DMSAASIRKKATEVGARVDA E+SL 
Sbjct: 61  YDTAVFYLRGPSARLNFPELLAGE-GRGITAGAGDMSAASIRKKATEVGARVDAQESSLG 120

Query: 121 AQ------HASPSPPQIKPCAAFLDRVDLNKLPDPEDDDQE 152
            Q      H S SPP+ K C+ FLDRVDLNKLPDPE++D+E
Sbjct: 121 QQSRSHHSHTSASPPETKGCSGFLDRVDLNKLPDPEEEDEE 160

[Close]

BLAST of Sed0002958 vs. ExPASy TrEMBL
Match: A0A6J1IMT2 (ethylene-responsive transcription factor RAP2-10-like OS=Cucurbita maxima OX=3661 GN=LOC111477879 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 8.6e-55
Identity = 121/164 (73.78%), Postives = 135/164 (82.32%), Query Frame = 0


Query: 2   DGGDQGTRKRGVGENQRPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDT 61
           +GG +GTRKRGV  NQ+ YKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDT
Sbjct: 6   EGGREGTRKRGV-HNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDT 65

Query: 62  AVFYLRGPSARLNFPDLLAREDGRGVT---APDMSAASIRKKATEVGARVDALETSLA-- 121
           A++YLRGPSARLNFPDLLA E GRG++     DMSAA+IRKKATEVGARVDALE+SL   
Sbjct: 66  ALYYLRGPSARLNFPDLLAGE-GRGISGGGCGDMSAATIRKKATEVGARVDALESSLGHH 125

Query: 122 ---------AQHASPSPPQIKPCAAFLDRVDLNKLPDPEDDDQE 152
                      HAS SPP+ K C+ FLDR+DLNKLPDPE+DD+E
Sbjct: 126 QHNHNNRNHHSHASASPPETKVCSGFLDRMDLNKLPDPEEDDEE 167

[Close]

BLAST of Sed0002958 vs. ExPASy TrEMBL
Match: A0A6J1GD06 (ethylene-responsive transcription factor RAP2-10-like OS=Cucurbita moschata OX=3662 GN=LOC111453053 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 8.6e-55
Identity = 121/164 (73.78%), Postives = 135/164 (82.32%), Query Frame = 0


Query: 2   DGGDQGTRKRGVGENQRPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDT 61
           +GG +GTRKRGV  NQ+ YKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDT
Sbjct: 6   EGGREGTRKRGV-HNQKLYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDT 65

Query: 62  AVFYLRGPSARLNFPDLLAREDGRGVT---APDMSAASIRKKATEVGARVDALETSLA-- 121
           AV+YLRGPSARLNFP+LLA E GRG++     DMSAA+IRKKATEVGARVDALE+SL   
Sbjct: 66  AVYYLRGPSARLNFPELLAGE-GRGISGGGCGDMSAATIRKKATEVGARVDALESSLGHH 125

Query: 122 ---------AQHASPSPPQIKPCAAFLDRVDLNKLPDPEDDDQE 152
                      HAS SPP+ K C+ FLDR+DLNKLPDPE+DD+E
Sbjct: 126 QHNHNNRNHHSHASASPPETKACSGFLDRMDLNKLPDPEEDDEE 167

[Close]

BLAST of Sed0002958 vs. TAIR 10
Match: AT5G67190.1 (DREB and EAR motif protein 2 )

HSP 1 Score: 168.7 bits (426), Expect = 3.7e-42
Identity = 99/177 (55.93%), Postives = 113/177 (63.84%), Query Frame = 0


Query: 7   GTRKRGVGENQRPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTAVFYL 66
           GTRKR      RPYKGIRMRKWGKWVAEIREPNKRSR+WLGSYS+P AAARAYDTAVFYL
Sbjct: 13  GTRKR-----DRPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYL 72

Query: 67  RGPSARLNFPDLLAREDGRGVTAPDMSAASIRKKATEVGARVDALETSL----------- 126
           RGP+ARLNFP+LL    G   +  DMSAA+IRKKATEVGA+VDAL T++           
Sbjct: 73  RGPTARLNFPELL---PGEKFSDEDMSAATIRKKATEVGAQVDALGTAVQNNRHRVFGQN 132

Query: 127 -------------------AAQHASPSPPQIKPCAAFLDRVDLNKLPDPEDDDQEPE 154
                                +       +++     LDRVDLNKLPDPE  D+E E
Sbjct: 133 RDSDVDNKNFHRNYQNGEREEEEEDEDDKRLRSGGRLLDRVDLNKLPDPESSDEEWE 181

[Close]

BLAST of Sed0002958 vs. TAIR 10
Match: AT2G23340.1 (DREB and EAR motif protein 3 )

HSP 1 Score: 166.0 bits (419), Expect = 2.4e-41
Identity = 95/156 (60.90%), Postives = 112/156 (71.79%), Query Frame = 0


Query: 7   GTRKRGVGENQRPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTAVFYL 66
           GTRKR +    +PYKGIRMRKWGKWVAEIREPNKRSRIWLGSY++P AAARAYDTAVFYL
Sbjct: 19  GTRKRDL----KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYL 78

Query: 67  RGPSARLNFPDLLA--REDGRGVTAPDMSAASIRKKATEVGARVDALETSLAAQHASPSP 126
           RGPSARLNFP+LLA       G    D+SAA IR+KA EVGA+VDAL  ++       + 
Sbjct: 79  RGPSARLNFPELLAGLTVSNGGGRGGDLSAAYIRRKAAEVGAQVDALGATVVVNTGGENR 138

Query: 127 ---PQIKPCA----AFLDRVDLNKLPDPEDDDQEPE 154
               +I+ C       L+RVDLNKLPDPE+ D + +
Sbjct: 139 GDYEKIENCRKSGNGSLERVDLNKLPDPENSDGDDD 170

[Close]

BLAST of Sed0002958 vs. TAIR 10
Match: AT4G36900.1 (related to AP2 10 )

HSP 1 Score: 163.7 bits (413), Expect = 1.2e-40
Identity = 103/179 (57.54%), Postives = 111/179 (62.01%), Query Frame = 0


Query: 8   TRKRGVGENQRPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTAVFYLR 67
           TRKR      +PYKGIRMRKWGKWVAEIREPNKRSRIWLGSYS+P AAARAYDTAVFYLR
Sbjct: 23  TRKR-----DKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPEAAARAYDTAVFYLR 82

Query: 68  GPSARLNFPDLLA-----REDGRGVT-APDMSAASIRKKATEVGARVDALETSLAA---- 127
           GPSARLNFP+LLA        G GV    DMSAA IR+KA EVGA+VDALE + A     
Sbjct: 83  GPSARLNFPELLAGVTVTGGGGGGVNGGGDMSAAYIRRKAAEVGAQVDALEAAGAGGNRH 142

Query: 128 ----QH---------------------ASPSPPQIKPCAAFLDRVDLNKLPDPEDDDQE 152
               QH                        S    K C   L+RVDLNKLPDPE  D +
Sbjct: 143 HHHHQHQRGNHDYVDNHSDYRINDDLMECSSKEGFKRCNGSLERVDLNKLPDPETSDDD 196

[Close]

BLAST of Sed0002958 vs. TAIR 10
Match: AT1G46768.1 (related to AP2 1 )

HSP 1 Score: 161.0 bits (406), Expect = 7.7e-40
Identity = 85/133 (63.91%), Postives = 99/133 (74.44%), Query Frame = 0


Query: 17  QRPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTAVFYLRGPSARLNFP 76
           ++PY+GIR RKWGKWVAEIREPNKRSR+WLGSY++ +AAARAYD AVFYLRGPSARLNFP
Sbjct: 28  RKPYRGIRRRKWGKWVAEIREPNKRSRLWLGSYTTDIAAARAYDVAVFYLRGPSARLNFP 87

Query: 77  DLLAREDGR--GVTAPDMSAASIRKKATEVGARVDALETSLAAQHASPSPPQIKPCAAFL 136
           DLL +E+      T  DM AA IR+KA EVGARVDAL  S A   A  +PP IKP     
Sbjct: 88  DLLLQEEDHLSAATTADMPAALIREKAAEVGARVDALLASAAPSMAHSTPPVIKP----- 147

Query: 137 DRVDLNKLPDPED 148
              DLN++P+  D
Sbjct: 148 ---DLNQIPESGD 152

[Close]

BLAST of Sed0002958 vs. TAIR 10
Match: AT3G50260.1 (cooperatively regulated by ethylene and jasmonate 1 )

HSP 1 Score: 159.8 bits (403), Expect = 1.7e-39
Identity = 89/139 (64.03%), Postives = 104/139 (74.82%), Query Frame = 0


Query: 15  ENQRPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTAVFYLRGPSARLN 74
           + +RP+KGIRMRKWGKWVAEIREPNKRSR+WLGSYS+P AAARAYDTAVFYLRGP+A LN
Sbjct: 16  KRERPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTATLN 75

Query: 75  FPDLLAREDGRGVTAPDMSAASIRKKATEVGARVDALETSLAAQHASPSPPQIKP--CAA 134
           FP+LL        +A DMSAA+IRKKATEVGA+VDA+  ++   +        K      
Sbjct: 76  FPELLP-----CTSAEDMSAATIRKKATEVGAQVDAIGATVVQNNKRRRVFSQKRDFGGG 135

Query: 135 FLDRVDLNKLPDPE--DDD 150
            L+ VDLNKLPDPE  DDD
Sbjct: 136 LLELVDLNKLPDPENLDDD 149

The following BLAST results are available for this feature:

BLAST of Sed0002958 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141907.1	3.2e-56	77.64	ethylene-responsive transcription factor ERF011 [Cucumis sativus] >KGN48539.1 hy...	[more]
XP_008440304.1	4.7e-55	77.02	PREDICTED: ethylene-responsive transcription factor ERF011 [Cucumis melo] >TYK12...	[more]
XP_038881276.1	4.7e-55	76.25	ethylene-responsive transcription factor ERF011-like [Benincasa hispida]	[more]
XP_022949762.1	1.8e-54	73.78	ethylene-responsive transcription factor RAP2-10-like [Cucurbita moschata] >KAG7...	[more]
XP_022977600.1	1.8e-54	73.78	ethylene-responsive transcription factor RAP2-10-like [Cucurbita maxima]	[more]

BLAST of Sed0002958 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FH94	5.2e-41	55.93	Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana OX=3702 ...	[more]
O22174	3.4e-40	60.90	Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SW63	1.7e-39	57.54	Ethylene-responsive transcription factor RAP2-10 OS=Arabidopsis thaliana OX=3702...	[more]
Q8LC30	1.1e-38	63.91	Ethylene-responsive transcription factor RAP2-1 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SNE1	2.4e-38	64.03	Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Sed0002958 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIC8	1.6e-56	77.64	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G491030 PE=...	[more]
A0A5D3CLU0	2.3e-55	77.02	Ethylene-responsive transcription factor ERF011 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3B0U0	2.3e-55	77.02	ethylene-responsive transcription factor ERF011 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1IMT2	8.6e-55	73.78	ethylene-responsive transcription factor RAP2-10-like OS=Cucurbita maxima OX=366...	[more]
A0A6J1GD06	8.6e-55	73.78	ethylene-responsive transcription factor RAP2-10-like OS=Cucurbita moschata OX=3...	[more]

BLAST of Sed0002958 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67190.1	3.7e-42	55.93	DREB and EAR motif protein 2	[more]
AT2G23340.1	2.4e-41	60.90	DREB and EAR motif protein 3	[more]
AT4G36900.1	1.2e-40	57.54	related to AP2 10	[more]
AT1G46768.1	7.7e-40	63.91	related to AP2 1	[more]
AT3G50260.1	1.7e-39	64.03	cooperatively regulated by ethylene and jasmonate 1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 20..31 score: 56.36 coord: 58..78 score: 52.99
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 19..82 e-value: 1.2E-36 score: 137.7
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 20..68 e-value: 1.8E-11 score: 44.1
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 19..76 score: 21.759424
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 20..78 e-value: 4.45896E-27 score: 94.2606
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 19..77 e-value: 4.3E-24 score: 86.4
None	No IPR available	PANTHER	PTHR31729	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED	coord: 6..149
None	No IPR available	PANTHER	PTHR31729:SF0	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-10	coord: 6..149
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 20..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002958.1	Sed0002958.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity