Sed0002944 (gene) Chayote v1

Overview


Name	Sed0002944
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Cyclin-D1-1-like
Location	LG10: 5112106 .. 5114782 (-)
RNA-Seq Expression	Sed0002944
Synteny	Sed0002944

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAATAATAACACATTTGGAATTGTTGAGTTCTAGAGATTTGGGTATTTTTTTCCGGCCAAGAAAAAAAATAGGAAAGGGGATGGGGAATTGTCAGGCGGCAGAGGCGGCGACGGTGGTGATTCAGCACCCTGGAAATCAAAGGACGGACAGGATTTATTGGTCCGTAAGTGCTCAAGAAATCATGACCGCTAATCCAGGCCATTACGTTGCGCTCGTTTTGAACTCAACCGCCACTTTCAAGTCCCAAAATGGAACCCCCATCAGGCACCTCAAGCTTCTCCGCCCCAATGATACGCTTCTCATCGGCCACGTCTATCGTCTCATCACCTTTCAAGGTAAACTCTTTTTAAAAAAAAATTATTTACAATATTTGAAACTCTTTTTAAATTTCTCTGATCATATATACCAAGAAAATTAAATATTAGCTAAATTTTCATTTCTTCACTAATTTGTTGGTGTTATTCAGGAAAATAAATAAAATAATTTGTCTTGTATAACTGAGGAGGAATAATTTTTTAGTTCAACAAATAGGGATGGGAGGATTTGAACTATCCTTTTGATTTATATACTCTACACACATACAATTGAATCAGTGTTCTTGTTTGCATTTTTTAGTTTTTAGAATATATATATATATATATATATATATATATATATAATAGGAAGTTATTTAAACCATCCAACAAAAAATTTTAGTACACTCAAAATGACAGCACACTTTGGCCATTTATTTTTCTAATTTTCTTGGTATAATATGACTAACTAATCCTCTGAAAAAAAGAAAAAGAAAAAAACTTAATGAGACTATGTTAACGTGACCGTCTTATAATAACAATGAAGAAATAGTTAGTATTTTTTTCTACCACTTCAAATAGCATGGTATATTTCAAAATATCTTATTTTATACAAAATCATTTTTCTAATGTAATATATAAATTATTTAAGTAGTAACCGGCATATATTCTCGAATAAGAAATTTAGACCCAAAAATTAAATAAATAATGTATATAAGTTTTGATCATTAATTCAGTAGTTCAAATCTACTGCTCCAAATAATTTTCAATTGAAAAACAAAAACATATCAATGGGTTATTACTACAAAAAGGTAGTCATATTTTGACCATGGTTTTGTATGCACAAAATTAGTACTTTATTTTACTTCCATGGTTTTGCATGTGTAAAGACTGTATCAACCTGTATTTTGTGTACAAATTTGAAGTTTTTTTCATTTATTTTTTCAGATGTACTGAAAGAGTTTACTGAAAAGAAATGTTCCAAGCTGGGGAAGTTACTGAAAGAGGGAGGAGCCCTTTCTGCTTCAAATCCAAATCAAAATTCTAAATCCCAAAATTACATTAAGGTAATTTTTTTTGAGATCCTTACATTAAGGTAATTAATTAAATATGCATAAGCCTTAATCATGCTCCAAATCTCAAAAAGTTGATAGAATATATGCATATTTTATTTTTCATCATTGTACTCTGATTAAAAGCCTAGAAAATAAAAGAAAAAACAAAAAGTAGATTTTTCTGAAATTGGTTTGAAATTTAAGGCCACGGATATCAAGGGCATTGGCTTTTATGGGTCCCTTCATGAATCTTGTCAGGAATTTACGTAGATCTGTAGGCTGCAGTTATCTACCATCAACTCAAAAATATGTATTTCAAAAGAAAAATATATGTATTTGCAAGACTAGATGGTGAGAGTGAACAGGAACACTTTTTATTATTTTTTTAAACACTGAAGAAAATAAAAATGTGTTTGAATTGAGAAATTATGAATGTTTATGACCTATATACTCCATATGAATCAATAGGTTATAAGTGATCTTGTGTTTGAATTAAAAAATTATAAATTGTTGAAATCAAAATAATCTAAAGTTTGAAGTTTATGAAACTTTTTATAGAGGCTTTTGAGAGTTACTCCATTCTAGTCAAAAGTTTGAAACTCTCACAAACATTCTATCTAAACACAAGTTTTAATTTATTTTTTATGGAATAAGAATAAACCCAATTAAAATTCAATAATAATAAAAAGAAGGATTCAAAGGATTTTTTTTTTTTTTTTTTTTTTTGGATTTTGAAAAGGAAAATACAGGTTAATCTAATCATTTGAAGGACCAAACCATAATGGTGTTTTGCCGGTCAGTTTAGAACGTACTCATTTTGAATTTGAGTTCCATGCATTTTCCACTAACTTCAACATCAATTTACATTAGAATTTAAATTTAAGTGGAGCTCTTAAAAAAAACACTTTTTTCTTAATAAAAGTTAGGGTAAGGAACACAAACACGTACAAAAAAAGTTTCATTTGAGAGTCAAATACTGATTCTATGGATCGAACCTGTGATTATGCAAAATGGAAAGTATTTCACTAATATCTTTTTTTATCATAATCATATGATACTATTATTTAAAAGAATGGTCAGGCAGCACACCGGCCGGAAAGCAGCAGTAACGGCAGCGGCGGCGGAAGAGGCGGAGGAGTACAGAGAGGCATGGGAAGGCATCACGGCGGTGGGAGTCAATGGAGGCCAGCCTTAAAGAGCATTGCAGAAGTTGGAATTAATATTATTTGAACAAAAAAACAAAATTTAAAAAGAAAAAGGCAATATGAACACAAATAGAATCTGCAAATTGCCCTTTTGCTTTCACCGTCTTTAATGAATAATTAAT

mRNA sequence

ATAATAATAACACATTTGGAATTGTTGAGTTCTAGAGATTTGGGTATTTTTTTCCGGCCAAGAAAAAAAATAGGAAAGGGGATGGGGAATTGTCAGGCGGCAGAGGCGGCGACGGTGGTGATTCAGCACCCTGGAAATCAAAGGACGGACAGGATTTATTGGTCCGTAAGTGCTCAAGAAATCATGACCGCTAATCCAGGCCATTACGTTGCGCTCGTTTTGAACTCAACCGCCACTTTCAAGTCCCAAAATGGAACCCCCATCAGGCACCTCAAGCTTCTCCGCCCCAATGATACGCTTCTCATCGGCCACGTCTATCGTCTCATCACCTTTCAAGATGTACTGAAAGAGTTTACTGAAAAGAAATGTTCCAAGCTGGGGAAGTTACTGAAAGAGGGAGGAGCCCTTTCTGCTTCAAATCCAAATCAAAATTCTAAATCCCAAAATTACATTAAGGCAGCACACCGGCCGGAAAGCAGCAGTAACGGCAGCGGCGGCGGAAGAGGCGGAGGAGTACAGAGAGGCATGGGAAGGCATCACGGCGGTGGGAGTCAATGGAGGCCAGCCTTAAAGAGCATTGCAGAAGTTGGAATTAATATTATTTGAACAAAAAAACAAAATTTAAAAAGAAAAAGGCAATATGAACACAAATAGAATCTGCAAATTGCCCTTTTGCTTTCACCGTCTTTAATGAATAATTAAT

Coding sequence (CDS)

ATGGGGAATTGTCAGGCGGCAGAGGCGGCGACGGTGGTGATTCAGCACCCTGGAAATCAAAGGACGGACAGGATTTATTGGTCCGTAAGTGCTCAAGAAATCATGACCGCTAATCCAGGCCATTACGTTGCGCTCGTTTTGAACTCAACCGCCACTTTCAAGTCCCAAAATGGAACCCCCATCAGGCACCTCAAGCTTCTCCGCCCCAATGATACGCTTCTCATCGGCCACGTCTATCGTCTCATCACCTTTCAAGATGTACTGAAAGAGTTTACTGAAAAGAAATGTTCCAAGCTGGGGAAGTTACTGAAAGAGGGAGGAGCCCTTTCTGCTTCAAATCCAAATCAAAATTCTAAATCCCAAAATTACATTAAGGCAGCACACCGGCCGGAAAGCAGCAGTAACGGCAGCGGCGGCGGAAGAGGCGGAGGAGTACAGAGAGGCATGGGAAGGCATCACGGCGGTGGGAGTCAATGGAGGCCAGCCTTAAAGAGCATTGCAGAAGTTGGAATTAATATTATTTGA

Protein sequence

MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGTPIRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKLGKLLKEGGALSASNPNQNSKSQNYIKAAHRPESSSNGSGGGRGGGVQRGMGRHHGGGSQWRPALKSIAEVGINII

Homology

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BLAST of Sed0002944 vs. NCBI nr
Match: XP_038883937.1 (uncharacterized protein LOC120074768 [Benincasa hispida])

HSP 1 Score: 256.5 bits (654), Expect = 1.6e-64
Identity = 136/184 (73.91%), Postives = 151/184 (82.07%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGTP 60
           MGNCQAAEAATVVIQHPGNQ+ +RIYWSVSA EIM +NPGHYVAL+L S+ T K++NGTP
Sbjct: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLLTSSTT-KTENGTP 60

Query: 61  IRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKLGKLLKEGGAL----------- 120
           I+ LKLLRP+DTLLIGHVYRLITF+DVLKEF  KKC KLGKLLKEGGAL           
Sbjct: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDN 120

Query: 121 SASNPNQNSKSQNYIKAAH-RPESSSNGSGGGRGGGVQRGMGRHHGGGSQWRPALKSIAE 173
           SASNPN NSKSQNY+K       S +  SGGGRGGG QRGMGRH+GGGSQWRPAL+SIAE
Sbjct: 121 SASNPNANSKSQNYMKPEQDGGRSDAGSSGGGRGGGGQRGMGRHYGGGSQWRPALQSIAE 180

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BLAST of Sed0002944 vs. NCBI nr
Match: XP_004141857.1 (uncharacterized protein LOC101222947 [Cucumis sativus] >KGN48621.1 hypothetical protein Csa_004276 [Cucumis sativus])

HSP 1 Score: 253.4 bits (646), Expect = 1.4e-63
Identity = 138/187 (73.80%), Postives = 154/187 (82.35%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGTP 60
           MGNCQAAEAATVVIQHPGNQ+ +RIYWSVSA EIM +NPGHYVAL++ S +T KS+NGTP
Sbjct: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITS-STMKSENGTP 60

Query: 61  IRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKLGKLLKEGGAL----------S 120
           I+ LKLLRP+DTLLIGHVYRLITF+DVLKEF  KKC KLGKLLKEGGAL          S
Sbjct: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDS 120

Query: 121 ASNPNQNSKSQNYIK----AAHRPESSSNG-SGGGRGGGVQRGMGRHHGGGSQWRPALKS 173
            SNPN NSKSQNY+K    A HR E+S+ G SGGGRG   QRGMGRH+GGGSQWRPAL+S
Sbjct: 121 GSNPNANSKSQNYMKPEQDAEHRLENSNAGSSGGGRG---QRGMGRHYGGGSQWRPALQS 180

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BLAST of Sed0002944 vs. NCBI nr
Match: XP_016899236.1 (PREDICTED: uncharacterized protein LOC103484864 [Cucumis melo])

HSP 1 Score: 252.3 bits (643), Expect = 3.1e-63
Identity = 138/189 (73.02%), Postives = 153/189 (80.95%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGTP 60
           MGNCQAAEAATVVIQHPGNQ+ +RIYWSVSA EIM +NPGHYVAL++ S +T KS+NGTP
Sbjct: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITS-STLKSENGTP 60

Query: 61  IRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKLGKLLKEGGAL----------S 120
           I+ LKLLRP+DTLLIGHVYRLITF+DVLKEF  KKC KLGKLLKEGGAL          S
Sbjct: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDS 120

Query: 121 ASNPNQNSKSQNYIK------AAHRPESSSNG-SGGGRGGGVQRGMGRHHGGGSQWRPAL 173
            SNPN NSKSQNY+K      A HR E+S  G SGGGRG   QRGMGRH+GGGSQWRPAL
Sbjct: 121 GSNPNANSKSQNYMKSQPEQNAEHRLENSDAGSSGGGRG---QRGMGRHYGGGSQWRPAL 180

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BLAST of Sed0002944 vs. NCBI nr
Match: XP_023003398.1 (uncharacterized protein LOC111497021 [Cucurbita maxima])

HSP 1 Score: 250.0 bits (637), Expect = 1.5e-62
Identity = 138/188 (73.40%), Postives = 151/188 (80.32%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPG-NQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGT 60
           MGNCQAAEAATVVIQHPG N R +RIYWSVSA +IM +NPGHYVALV+ S +T K+QNGT
Sbjct: 1   MGNCQAAEAATVVIQHPGINPRIERIYWSVSAHQIMNSNPGHYVALVVTS-STLKTQNGT 60

Query: 61  PIRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKLGKLLKEGGAL---------- 120
           PI+HLKLLRP+DTLLIGHVYRLITF+DVLKEF  KKC KLGKLLKEGGAL          
Sbjct: 61  PIKHLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSIGMKKKDTD 120

Query: 121 SASNPNQNSKSQNYIKA----AHRPESSSNG-SGGGRGGGVQRGMGRHHGGGSQWRPALK 173
           SASNPN NSKSQNY+KA      R E+   G S GGRGGG  RGMGRH+GGG QWRPAL+
Sbjct: 121 SASNPNSNSKSQNYMKAEQEGGRRLENRDAGSSSGGRGGGGHRGMGRHYGGGGQWRPALQ 180

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BLAST of Sed0002944 vs. NCBI nr
Match: KAG6594969.1 (hypothetical protein SDJN03_11522, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 247.3 bits (630), Expect = 9.8e-62
Identity = 136/184 (73.91%), Postives = 150/184 (81.52%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPG-NQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGT 60
           MGNCQAAEAATVVIQHPG N + +RIYWSVSA +IM +NPGHYVALV+ S +T K+QNGT
Sbjct: 1   MGNCQAAEAATVVIQHPGINPKIERIYWSVSAHQIMNSNPGHYVALVVTS-STLKTQNGT 60

Query: 61  PIRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKLGKLLKEGGAL------SASN 120
           PI+ LKLLRP+DTLLIGHVYRLITF+DVLKEF  KKC KLGKLLKEGGAL      SASN
Sbjct: 61  PIKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSKKDTDSASN 120

Query: 121 PNQNSKSQNYIKA----AHRPESSSNG-SGGGRGGGVQRGMGRHHGGGSQWRPALKSIAE 173
           PN NSKSQNY+KA      R E+   G S GGRGGG  RGMGRH+GGG QWRPAL+SIAE
Sbjct: 121 PNSNSKSQNYMKAEQEGGRRLENRDAGSSSGGRGGGGHRGMGRHYGGGGQWRPALQSIAE 180

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BLAST of Sed0002944 vs. ExPASy TrEMBL
Match: A0A0A0KLJ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495750 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 6.6e-64
Identity = 138/187 (73.80%), Postives = 154/187 (82.35%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGTP 60
           MGNCQAAEAATVVIQHPGNQ+ +RIYWSVSA EIM +NPGHYVAL++ S +T KS+NGTP
Sbjct: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITS-STMKSENGTP 60

Query: 61  IRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKLGKLLKEGGAL----------S 120
           I+ LKLLRP+DTLLIGHVYRLITF+DVLKEF  KKC KLGKLLKEGGAL          S
Sbjct: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDS 120

Query: 121 ASNPNQNSKSQNYIK----AAHRPESSSNG-SGGGRGGGVQRGMGRHHGGGSQWRPALKS 173
            SNPN NSKSQNY+K    A HR E+S+ G SGGGRG   QRGMGRH+GGGSQWRPAL+S
Sbjct: 121 GSNPNANSKSQNYMKPEQDAEHRLENSNAGSSGGGRG---QRGMGRHYGGGSQWRPALQS 180

[Close]

BLAST of Sed0002944 vs. ExPASy TrEMBL
Match: A0A1S4DTC0 (uncharacterized protein LOC103484864 OS=Cucumis melo OX=3656 GN=LOC103484864 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.5e-63
Identity = 138/189 (73.02%), Postives = 153/189 (80.95%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGTP 60
           MGNCQAAEAATVVIQHPGNQ+ +RIYWSVSA EIM +NPGHYVAL++ S +T KS+NGTP
Sbjct: 1   MGNCQAAEAATVVIQHPGNQKIERIYWSVSAHEIMNSNPGHYVALLITS-STLKSENGTP 60

Query: 61  IRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKLGKLLKEGGAL----------S 120
           I+ LKLLRP+DTLLIGHVYRLITF+DVLKEF  KKC KLGKLLKEGGAL          S
Sbjct: 61  IKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSVGMKIKGSDS 120

Query: 121 ASNPNQNSKSQNYIK------AAHRPESSSNG-SGGGRGGGVQRGMGRHHGGGSQWRPAL 173
            SNPN NSKSQNY+K      A HR E+S  G SGGGRG   QRGMGRH+GGGSQWRPAL
Sbjct: 121 GSNPNANSKSQNYMKSQPEQNAEHRLENSDAGSSGGGRG---QRGMGRHYGGGSQWRPAL 180

[Close]

BLAST of Sed0002944 vs. ExPASy TrEMBL
Match: A0A6J1KWE0 (uncharacterized protein LOC111497021 OS=Cucurbita maxima OX=3661 GN=LOC111497021 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 7.3e-63
Identity = 138/188 (73.40%), Postives = 151/188 (80.32%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPG-NQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGT 60
           MGNCQAAEAATVVIQHPG N R +RIYWSVSA +IM +NPGHYVALV+ S +T K+QNGT
Sbjct: 1   MGNCQAAEAATVVIQHPGINPRIERIYWSVSAHQIMNSNPGHYVALVVTS-STLKTQNGT 60

Query: 61  PIRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKLGKLLKEGGAL---------- 120
           PI+HLKLLRP+DTLLIGHVYRLITF+DVLKEF  KKC KLGKLLKEGGAL          
Sbjct: 61  PIKHLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSIGMKKKDTD 120

Query: 121 SASNPNQNSKSQNYIKA----AHRPESSSNG-SGGGRGGGVQRGMGRHHGGGSQWRPALK 173
           SASNPN NSKSQNY+KA      R E+   G S GGRGGG  RGMGRH+GGG QWRPAL+
Sbjct: 121 SASNPNSNSKSQNYMKAEQEGGRRLENRDAGSSSGGRGGGGHRGMGRHYGGGGQWRPALQ 180

[Close]

BLAST of Sed0002944 vs. ExPASy TrEMBL
Match: A0A6J1HGV9 (uncharacterized protein LOC111463436 OS=Cucurbita moschata OX=3662 GN=LOC111463436 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.8e-61
Identity = 136/188 (72.34%), Postives = 150/188 (79.79%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPG-NQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGT 60
           MGNCQAAEAATVVIQHPG N + +RIYWSVSA +IM +NPGHYVALV+ S +T K+QNGT
Sbjct: 1   MGNCQAAEAATVVIQHPGINPKIERIYWSVSAHQIMNSNPGHYVALVVTS-STLKTQNGT 60

Query: 61  PIRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKLGKLLKEGGAL---------- 120
           PI+ LKLLRP+DTLLIGHVYRLITF+DVLKEF  KKC KLGKLLKEGGAL          
Sbjct: 61  PIKQLKLLRPDDTLLIGHVYRLITFEDVLKEFAAKKCVKLGKLLKEGGALSIGMKINDTN 120

Query: 121 SASNPNQNSKSQNYIKA----AHRPESSSNGS-GGGRGGGVQRGMGRHHGGGSQWRPALK 173
           SASNPN NSKSQNY+KA      R E+   GS  GGRGGG  RGMGRH+GGG QWRPAL+
Sbjct: 121 SASNPNSNSKSQNYMKAEQEGGRRLENRDAGSRSGGRGGGGPRGMGRHYGGGGQWRPALQ 180

[Close]

BLAST of Sed0002944 vs. ExPASy TrEMBL
Match: A0A6J1GER4 (uncharacterized protein LOC111453516 OS=Cucurbita moschata OX=3662 GN=LOC111453516 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 3.2e-58
Identity = 122/177 (68.93%), Postives = 142/177 (80.23%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGTP 60
           MGNCQAAEAATVVI HPGN + +RIYWSVSA E+M +NPGHYVAL+L S +TF SQNG P
Sbjct: 1   MGNCQAAEAATVVIHHPGNHKIERIYWSVSAHEVMNSNPGHYVALLLTS-STFNSQNGNP 60

Query: 61  IRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKLGKLLKEGGALSAS-----NPN 120
           I+ LKLLRP+DTLLIGHVYRLI+F+DVLKEF  KKC KLGKLL+EGGALS       + +
Sbjct: 61  IKQLKLLRPDDTLLIGHVYRLISFEDVLKEFAAKKCVKLGKLLREGGALSVGMKIKPSDS 120

Query: 121 QNSKSQNYIKAAHRPESSSNGSGGGRGGGVQRGMGRHHGGGSQWRPALKSIAEVGIN 173
            ++ SQN+ K   R ESS+ GS GG GGG QR MG+H+GGG QWRPAL+SIAE GIN
Sbjct: 121 ASNSSQNHRKPERRLESSNAGSSGGGGGGGQRSMGKHYGGGCQWRPALQSIAEFGIN 176

[Close]

BLAST of Sed0002944 vs. TAIR 10
Match: AT5G67620.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: microtubule; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 164.9 bits (416), Expect = 6.0e-41
Identity = 94/181 (51.93%), Postives = 118/181 (65.19%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGTP 60
           MGNCQAAEAATV+I HP   + +RIYWSV+A +IM +NPGHYVA+V+ S  T K++ G P
Sbjct: 1   MGNCQAAEAATVLIHHPAENKVERIYWSVTASDIMKSNPGHYVAVVVTS-PTMKNEKGLP 60

Query: 61  IRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKLGKLLKEGGALSASNPNQNSKS 120
           ++ LKLLRP+DTLLIGHVYRL++F++VL EF  KKC KLGKLLKEGG L  +      + 
Sbjct: 61  LKQLKLLRPDDTLLIGHVYRLVSFEEVLNEFATKKCVKLGKLLKEGGGLDLTKKKTKHRK 120

Query: 121 QNYIKAAHR--PESSSNGSGGGRGGGV--QRG----MGRHHG---GGSQWRPALKSIAEV 171
           +   +   +  P S  N +  G    V  + G    M R HG   GG  WRPAL SI E 
Sbjct: 121 KKLDQETGKVNPNSDPNPNQDGADNAVAGENGGDGFMRRSHGGGRGGGGWRPALHSIPEF 180

[Close]

BLAST of Sed0002944 vs. TAIR 10
Match: AT5G50090.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 100.9 bits (250), Expect = 1.1e-21
Identity = 64/153 (41.83%), Postives = 92/153 (60.13%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVLNSTA--TFKSQNG 60
           MGNCQA + A VVIQHP N + +++   VSA  +M  NPGH V+L++++TA  +  S +G
Sbjct: 1   MGNCQAVDTARVVIQHP-NGKEEKLSCPVSASYVMKMNPGHCVSLLISTTALSSASSGHG 60

Query: 61  TPIR--HLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKLGK----------LLKEG 120
            P+R   +KLLRP DTL++GHVYRLIT ++V+K    KKCSKL K          ++K  
Sbjct: 61  GPLRLTRIKLLRPTDTLVLGHVYRLITTKEVMKGLMAKKCSKLKKESKGSDDKLEMVKAI 120

Query: 121 GALSASNPNQNSKSQNYIKAAHRPESSSNGSGG 140
            +    N +Q  K ++ I  + +P   S   GG
Sbjct: 121 NSTKLDNEDQ-EKERSRISRSWQPSLQSISEGG 151

[Close]

BLAST of Sed0002944 vs. TAIR 10
Match: AT5G50090.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 99.0 bits (245), Expect = 4.0e-21
Identity = 64/158 (40.51%), Postives = 92/158 (58.23%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVLNSTA--TFKSQNG 60
           MGNCQA + A VVIQHP N + +++   VSA  +M  NPGH V+L++++TA  +  S +G
Sbjct: 1   MGNCQAVDTARVVIQHP-NGKEEKLSCPVSASYVMKMNPGHCVSLLISTTALSSASSGHG 60

Query: 61  TPIR--HLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKLGK----------LLKEG 120
            P+R   +KLLRP DTL++GHVYRLIT ++V+K    KKCSKL K          ++K  
Sbjct: 61  GPLRLTRIKLLRPTDTLVLGHVYRLITTKEVMKGLMAKKCSKLKKESKGSDDKLEMVKAI 120

Query: 121 GALSASNPNQ-----NSKSQNYIKAAHRPESSSNGSGG 140
            +    N +Q       K ++ I  + +P   S   GG
Sbjct: 121 NSTKLDNEDQLQMKKQEKERSRISRSWQPSLQSISEGG 157

[Close]

BLAST of Sed0002944 vs. TAIR 10
Match: AT5G62900.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G50090.1); Has 157 Blast hits to 157 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 157; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 95.1 bits (235), Expect = 5.8e-20
Identity = 69/171 (40.35%), Postives = 100/171 (58.48%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGTP 60
           MGNCQAAEAAT VIQ P + ++ R Y +V+A E++ ++PGH+VAL+L+S           
Sbjct: 1   MGNCQAAEAATTVIQQP-DGKSVRFYCTVNASEVIKSHPGHHVALLLSSAV--PHGGSLR 60

Query: 61  IRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKLGKLLKEGGALSASNPNQNSKS 120
           +  +KLLRP+D LL+GHVYRLI+ ++V+K    KK    GK+ K  G  S +    N  +
Sbjct: 61  VTRIKLLRPSDNLLLGHVYRLISSEEVMKGIRAKKS---GKMKKIHGEFSVAEEEINPLT 120

Query: 121 QNYIKAAHRPESSSNGSGGGRGGGVQRGMGRHHGGGSQ---WRPALKSIAE 169
                   R ES+S+     R    QRGM    G  ++   W+P+L+SI+E
Sbjct: 121 L-------RSESASDKDTQRRIHEKQRGMMNTGGATNKVRAWQPSLQSISE 158

[Close]

BLAST of Sed0002944 vs. TAIR 10
Match: AT1G10530.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G60010.1); Has 143 Blast hits to 143 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 87.8 bits (216), Expect = 9.3e-18
Identity = 66/183 (36.07%), Postives = 87/183 (47.54%), Query Frame = 0


Query: 1   MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVL--------NSTAT 60
           MGNCQA  AA +V+QHPG    DR Y SVS  E+M   PGHYV+L++        N  AT
Sbjct: 1   MGNCQAVNAAVLVLQHPGG-IIDRYYSSVSVTEVMAMYPGHYVSLIIPLSEEEEKNIPAT 60

Query: 61  -----FKSQNGTPIRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKLGK--LLKE 120
                 K +       ++LLRP + L++GH YRLIT Q+V+K   EKK +K  K  + K 
Sbjct: 61  EKGDDKKQRKAVRFTRVQLLRPTENLVLGHAYRLITSQEVMKVLREKKSAKTKKHQIEKT 120

Query: 121 GGALSASNPNQNSKSQNYIKAAHRPESSSNGSGGGRGGGVQRGMGRHHGGGSQWRPALKS 169
             A   S+     K Q       R  +S   S                     WRP+L+S
Sbjct: 121 TTAKKFSDKKVPEKKQGKQFRVIRNSTSLLKS-------------------KTWRPSLQS 163

The following BLAST results are available for this feature:

BLAST of Sed0002944 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883937.1	1.6e-64	73.91	uncharacterized protein LOC120074768 [Benincasa hispida]	[more]
XP_004141857.1	1.4e-63	73.80	uncharacterized protein LOC101222947 [Cucumis sativus] >KGN48621.1 hypothetical ...	[more]
XP_016899236.1	3.1e-63	73.02	PREDICTED: uncharacterized protein LOC103484864 [Cucumis melo]	[more]
XP_023003398.1	1.5e-62	73.40	uncharacterized protein LOC111497021 [Cucurbita maxima]	[more]
KAG6594969.1	9.8e-62	73.91	hypothetical protein SDJN03_11522, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Sed0002944 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0002944 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLJ3	6.6e-64	73.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495750 PE=4 SV=1	[more]
A0A1S4DTC0	1.5e-63	73.02	uncharacterized protein LOC103484864 OS=Cucumis melo OX=3656 GN=LOC103484864 PE=...	[more]
A0A6J1KWE0	7.3e-63	73.40	uncharacterized protein LOC111497021 OS=Cucurbita maxima OX=3661 GN=LOC111497021...	[more]
A0A6J1HGV9	1.8e-61	72.34	uncharacterized protein LOC111463436 OS=Cucurbita moschata OX=3662 GN=LOC1114634...	[more]
A0A6J1GER4	3.2e-58	68.93	uncharacterized protein LOC111453516 OS=Cucurbita moschata OX=3662 GN=LOC1114535...	[more]

BLAST of Sed0002944 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67620.1	6.0e-41	51.93	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G50090.2	1.1e-21	41.83	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G50090.1	4.0e-21	40.51	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G62900.1	5.8e-20	40.35	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT1G10530.1	9.3e-18	36.07	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..168 e-value: 1.2E-28 score: 100.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..161
None	No IPR available	PANTHER	PTHR33413:SF1	EXPRESSED PROTEIN	coord: 1..169
None	No IPR available	PANTHER	PTHR33413	EXPRESSED PROTEIN	coord: 1..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002944.1	Sed0002944.1	mRNA