Sed0002907 (gene) Chayote v1

Overview


Name	Sed0002907
Type	gene
Organism	Sechium edule (Chayote v1)
Description	cyclic phosphodiesterase-like
Location	LG10: 1154371 .. 1157791 (-)
RNA-Seq Expression	Sed0002907
Synteny	Sed0002907

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCTTTAGCATCCATTCCTCCCATTGCCATATAAACCCCAATGGGAATGTGAGCTCAATTATTTTCACTCCATAATTTCCATTATTGCTCCAACAATGGCAAACCCAGAACCCGGGAAGAACACGTATACGGTGTTCGCGCTTCCTCCCGATGATGTTGCCGCCAGAATCCAGACTCTGATGGACAGCCTGAGATCCGAGTTCGGCGGCCCCCAGTTCATTCCTCATATCACTGTCGTCGGCCCAATTCATCTCACCCCCGACGACGCCCTCGACAAATTCCAATCGGCTTGCGAGGGGCTTAAGGCTTACCAAGCCACCGTGGATCGTGTAGCTACTGGAGTCTTGTATTATCAGTGCGTTTATCTTCATTTTTATCCCACAACTGAGGTGTACTGCTCATTCCCAAGCTATCATATTTCTGCTTTTCTTTTCATCTTCACATATTAATTAATAATCTCTCTTTTCCTTTTTCAGGTGATGGAGACTAGTTCTCATTGCTGTCAATATTTTGGTTATGAAGACTCTACACGTAAGTTTATTCACATTCAATACGTTATCTTGTATTTTAATACTTCATCCATCCCATAGCGCTGAGAGTGATGTCTTTCCAAAGGGTAGGAGGGGATTTCTGTTTATGCTTCGACAAGAAGATACCTGCATTCCGTTCTTTTCAAACTTATCATAAGATAGCACCTCTCAAGTTGGTTGCTACGTTGAGAGCCGACTTTAAAGCAGAAAATTATTTCTTTCTAAAATATAAAGTTCAATTTTGTATCAAAATTATCTCTTTTAACTCTGAAAAGTATGTATTAAAAGAATGAAGTGTTAACATAAAAAAGGGGTTAATTGTCTAAATGGGTCTTTTTTTGAAACTTTTTGTTAAAAAGAGTCTGTTTTGAAATTAAATATAAGAATGGGTTGTTGCGTTTCTTCTAAAGACGCAACACCTATGGAAATTAGTCAATCTCTTTTGTCGTATTTGCCACATCAGCAAAATTTAAATAAATTCCAATGACTGGCTTTACAAAAGACGCAATATACCTATTTTCTCTTTATCTTATTTTTTTCTTTTCTATTATGTTTTAACCCTCAAATTTGTAAACATTTTTTTTTTAGAATTACTAAATTTTATTTCAATAACTTTTATTTAATTTTGTAAAATAATTTCTTTCATCGTAATCATGTTTTATTTCTTCATATTCATTTAAAAATAAATCTAATTATTTTTCTGAAATTCTAAATTTTTTAATAATTCAACTGTTGTTATATTCTAAACTTTTGTGTATATATATTAACAAAATTAATGTTCTCTTTACGATAAGAATTCACTTTTATTAATTTTATCCTAATACCATTAACATGCTATCTTAATTATAACACACATATTTGATAAGTGTTCTAATGAATTTTAAATTTATTGCATAATTATATTTTAATAATAAAATTATTTATAGATTTGGTTAGAATGTTATTATTTTTGTATAAAATTTTTATCGTAAATTTTAATTCAAATTTATTATCTACAAAATCCTATAATTATTAAAAAGGTTAAGGTTTTAATTTATTATTTAAACAAATGACTATTTAAGGTTAATAATTTAAGAAACATTATTTATATTATAAATAGATTATATGTTATTTTAATTACTCCTTTTAAGTTAAGAGTTTTTTTTTTTGAGAATTTTAAATTAAGAGTGGGAGGATGTCCGATTGTAATAGATTTTTTTAGTTTTTTTAGATTTAATTTTGTAATGGTATACGTCAATTAATTTGTTAAGATTTAATAATAACAATCTAACAAAATCTTCACTTGTTTATTAAAATCTAATGATAATATTCTAACAAAATCTACAACAATATTATATGGTGAAATATTTGAAATTGGAAATCATAGATAAAATTAATAAAAAATATTTATAGATAAGTTAATTTAGTGAATATAAGAATATTTTAGAATATAACTAAATAAAAATGGAATAATATAAAATTAGGAATTTTAAAAATGATTAAATTTAAATTTTAAATGAATATGAAGAATAATAATATGATTATGATGAAATAAAATTATTTTATAAAAATATTATCTCAAAGTTATTTGAAAAAATAGTGATTTTATGATTAAAAAGTAATTTAAAAAAGAGAAATAGTAGCATGTGGCGTCTATAGTAGAGTGATAATTGAAGTTTGTTAAGATATTGCTTATGTGGCTAATACGACAAAAATGTTTGAAGTAAAAACGCCATAACCCATTTTAAGTTTTTAAAAAAGACCCCTTCTAATAAATAATCCCATAAAAAGAGTTGGAAAAAATAAATAAGAAAACAAAAACAAATTAGTTGCCACGTGGCACTTTGTTATTGTGCCAGGTTTATTTTTTTAATTTTATTTTTTAAAAGTTCTCCACAATCAAACACCGAGTTGGTATTTGAAACAAATCGAGTATTTAACTTTTTAAAAGTTGAATTATTTTTCGAACAAGTTTTCTTCCAAAATTAAGAGTATTTATGAAACGATTTGCAAAGTTTAGAGGTATTTTAAAAACTTTTCAAAGCAATTTTGTTTATTTTTTGTTTTTTTTTTTGATAATTTTGCCTATATGTATAGATTGTTGGTAGGTAAAATCAATCATGTGTAGGCAATTAATTTGGCCATGATGAATAGAATTATTTGGTCCCATGATGGTTCTTTCTCTTAGATTGTAATGAACATGCCGTAGGTTTTAGTATATCAAGTTAGCTTGTGTATTTAATTATTGACTAAGATTACACAGTATGAACATTTGGATTTTACATATTTGGTGTTGGAAAAGCTCTTAGCTAGGATTTGGTAAACTTATTGGTATTGTCCATTTTGATGGTGATACTGATAACAGCAAAGTATTTGTTCTATTCATCCAAGTAGTAATATGAAAGTAAATGCAACTATACAAGCGTTGTCCATTTCAATTAACAATACCAACTTTTATGATTTGTACATCAGCTTACATGCCGCATTTGAGTCTACTGTATGGCAACCTATCAGATGAAAAAAAGGAGCAGGCAAAAGAAACGGTAAACAAACTCGATGAAACGATTGCCGATCTGAGCTTCTCGGTCACTCGACTTGCACTGTATAAAACCGGCAATGGAGATGGAACGCCTCTAAAGTCGTGGGAGAAAATTGCAGAACACCATCTTCCTTCTTGTTAGCTTCTGTTGTTATCTATGGCATGCCCCCATTTAAAGAATCTTCTCATGTGTCGTACGTTGTTATGGTTTTCTTTACTTTAGTGAAGGTCGGCCAAAGGCCCTTGTGTGAAAGCTTATCAAGCCTTATATTTAGGTTGTTTTGGACCTCTTTTGTTATCTAAAAAACTACCTTTCGAATATATATATTGGCAATCAAAGTGCAATAATAATATGTACTTTATTTTAGTATCA

mRNA sequence

GGCTTTAGCATCCATTCCTCCCATTGCCATATAAACCCCAATGGGAATGTGAGCTCAATTATTTTCACTCCATAATTTCCATTATTGCTCCAACAATGGCAAACCCAGAACCCGGGAAGAACACGTATACGGTGTTCGCGCTTCCTCCCGATGATGTTGCCGCCAGAATCCAGACTCTGATGGACAGCCTGAGATCCGAGTTCGGCGGCCCCCAGTTCATTCCTCATATCACTGTCGTCGGCCCAATTCATCTCACCCCCGACGACGCCCTCGACAAATTCCAATCGGCTTGCGAGGGGCTTAAGGCTTACCAAGCCACCGTGGATCGTGTAGCTACTGGAGTCTTGTATTATCAGTGCGTTTATCTTCATTTTTATCCCACAACTGAGGTGATGGAGACTAGTTCTCATTGCTGTCAATATTTTGGTTATGAAGACTCTACACCTTACATGCCGCATTTGAGTCTACTGTATGGCAACCTATCAGATGAAAAAAAGGAGCAGGCAAAAGAAACGGTAAACAAACTCGATGAAACGATTGCCGATCTGAGCTTCTCGGTCACTCGACTTGCACTGTATAAAACCGGCAATGGAGATGGAACGCCTCTAAAGTCGTGGGAGAAAATTGCAGAACACCATCTTCCTTCTTGTTAGCTTCTGTTGTTATCTATGGCATGCCCCCATTTAAAGAATCTTCTCATGTGTCGTACGTTGTTATGGTTTTCTTTACTTTAGTGAAGGTCGGCCAAAGGCCCTTGTGTGAAAGCTTATCAAGCCTTATATTTAGGTTGTTTTGGACCTCTTTTGTTATCTAAAAAACTACCTTTCGAATATATATATTGGCAATCAAAGTGCAATAATAATATGTACTTTATTTTAGTATCA

Coding sequence (CDS)

ATGGCAAACCCAGAACCCGGGAAGAACACGTATACGGTGTTCGCGCTTCCTCCCGATGATGTTGCCGCCAGAATCCAGACTCTGATGGACAGCCTGAGATCCGAGTTCGGCGGCCCCCAGTTCATTCCTCATATCACTGTCGTCGGCCCAATTCATCTCACCCCCGACGACGCCCTCGACAAATTCCAATCGGCTTGCGAGGGGCTTAAGGCTTACCAAGCCACCGTGGATCGTGTAGCTACTGGAGTCTTGTATTATCAGTGCGTTTATCTTCATTTTTATCCCACAACTGAGGTGATGGAGACTAGTTCTCATTGCTGTCAATATTTTGGTTATGAAGACTCTACACCTTACATGCCGCATTTGAGTCTACTGTATGGCAACCTATCAGATGAAAAAAAGGAGCAGGCAAAAGAAACGGTAAACAAACTCGATGAAACGATTGCCGATCTGAGCTTCTCGGTCACTCGACTTGCACTGTATAAAACCGGCAATGGAGATGGAACGCCTCTAAAGTCGTGGGAGAAAATTGCAGAACACCATCTTCCTTCTTGTTAG

Protein sequence

MANPEPGKNTYTVFALPPDDVAARIQTLMDSLRSEFGGPQFIPHITVVGPIHLTPDDALDKFQSACEGLKAYQATVDRVATGVLYYQCVYLHFYPTTEVMETSSHCCQYFGYEDSTPYMPHLSLLYGNLSDEKKEQAKETVNKLDETIADLSFSVTRLALYKTGNGDGTPLKSWEKIAEHHLPSC

Homology

[Close]

BLAST of Sed0002907 vs. NCBI nr
Match: XP_022978766.1 (cyclic phosphodiesterase-like [Cucurbita maxima])

HSP 1 Score: 273.1 bits (697), Expect = 1.8e-69
Identity = 137/192 (71.35%), Postives = 156/192 (81.25%), Query Frame = 0


Query: 1   MANPEP--------GKNTYTVFALPPDDVAARIQTLMDSLRSEFGGPQFIPHITVVGPIH 60
           MANPE          KN Y+V+ALPP+DV ARI+TLM+SLRSEFGGPQF PHITVVG I 
Sbjct: 1   MANPESPTIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIR 60

Query: 61  LTPDDALDKFQSACEGLKAYQATVDRVATGVLYYQCVYLHFYPTTEVMETSSHCCQYFGY 120
           LT DDAL+KF+SACEGLKAYQATVD V+TG  +YQCV+L  +PTT+V+ETSSHCC +FGY
Sbjct: 61  LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTTQVVETSSHCCGHFGY 120

Query: 121 EDSTPYMPHLSLLYGNLSDEKKEQAKETVNKLDETIADLSFSVTRLALYKTGNGDGTPLK 180
           ++STPYMPHLSLLY N+SDE+K+QAKE   KLDE I  LSF VTRLALYKT  GD T LK
Sbjct: 121 KNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPVTRLALYKTDTGDET-LK 180

Query: 181 SWEKIAEHHLPS 185
           SWEKIAE  LPS
Sbjct: 181 SWEKIAEQDLPS 191

[Close]

BLAST of Sed0002907 vs. NCBI nr
Match: XP_023543945.1 (cyclic phosphodiesterase-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 272.7 bits (696), Expect = 2.3e-69
Identity = 136/192 (70.83%), Postives = 156/192 (81.25%), Query Frame = 0


Query: 1   MANPEP--------GKNTYTVFALPPDDVAARIQTLMDSLRSEFGGPQFIPHITVVGPIH 60
           MANPE          KN Y+V+ALPP+DV ARI+TLM+SLRSEFGGPQF PHITVVG I 
Sbjct: 1   MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIR 60

Query: 61  LTPDDALDKFQSACEGLKAYQATVDRVATGVLYYQCVYLHFYPTTEVMETSSHCCQYFGY 120
           LT DDAL+KF+SACEGLKAYQATVD V+TG  +YQCV+L  +PTT+V+ETSSHCC +FGY
Sbjct: 61  LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTTQVVETSSHCCGHFGY 120

Query: 121 EDSTPYMPHLSLLYGNLSDEKKEQAKETVNKLDETIADLSFSVTRLALYKTGNGDGTPLK 180
           ++STPYMPHLSLLY N+SDE+K+QAKE   KLDE I  LSF +TRLALYKT  GD T LK
Sbjct: 121 KNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDET-LK 180

Query: 181 SWEKIAEHHLPS 185
           SWEKIAE  LPS
Sbjct: 181 SWEKIAEQDLPS 191

[Close]

BLAST of Sed0002907 vs. NCBI nr
Match: KAG6581386.1 (Cyclic phosphodiesterase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 271.9 bits (694), Expect = 4.0e-69
Identity = 136/192 (70.83%), Postives = 155/192 (80.73%), Query Frame = 0


Query: 1   MANPEP--------GKNTYTVFALPPDDVAARIQTLMDSLRSEFGGPQFIPHITVVGPIH 60
           MANPE          KN Y+V+ALPP+DV ARI+TLM+SLRSEFGGPQF PHITVVG I 
Sbjct: 1   MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIR 60

Query: 61  LTPDDALDKFQSACEGLKAYQATVDRVATGVLYYQCVYLHFYPTTEVMETSSHCCQYFGY 120
           LT DDAL+KF+SACEGLKAYQATVD V+TG  +YQCV+L  +PTT+V+ETSSHCC +FGY
Sbjct: 61  LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTTKVVETSSHCCGHFGY 120

Query: 121 EDSTPYMPHLSLLYGNLSDEKKEQAKETVNKLDETIADLSFSVTRLALYKTGNGDGTPLK 180
            +STPYMPHLSLLY N+SDE+K+QAKE   KLDE I  LSF +TRLALYKT  GD T LK
Sbjct: 121 NNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDET-LK 180

Query: 181 SWEKIAEHHLPS 185
           SWEKIAE  LPS
Sbjct: 181 SWEKIAEQDLPS 191

[Close]

BLAST of Sed0002907 vs. NCBI nr
Match: XP_023522563.1 (cyclic phosphodiesterase-like [Cucurbita pepo subsp. pepo] >XP_023543944.1 cyclic phosphodiesterase-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 271.6 bits (693), Expect = 5.2e-69
Identity = 136/192 (70.83%), Postives = 155/192 (80.73%), Query Frame = 0


Query: 1   MANPEP--------GKNTYTVFALPPDDVAARIQTLMDSLRSEFGGPQFIPHITVVGPIH 60
           MANPE          KN Y+V+ALPP+DV ARI+TLM+SLRSEFGGPQF PHITVVG I 
Sbjct: 1   MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIR 60

Query: 61  LTPDDALDKFQSACEGLKAYQATVDRVATGVLYYQCVYLHFYPTTEVMETSSHCCQYFGY 120
           LT DDAL+KF+SACEGLKAYQATVD V+TG  +YQCV+L  +PT EV+ETSSHCC +FGY
Sbjct: 61  LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTIEVVETSSHCCGHFGY 120

Query: 121 EDSTPYMPHLSLLYGNLSDEKKEQAKETVNKLDETIADLSFSVTRLALYKTGNGDGTPLK 180
           ++STPYMPHLSLLY N+SDE+K+QAKE   KLDE I  LSF +TRLALYKT  GD T LK
Sbjct: 121 KNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDET-LK 180

Query: 181 SWEKIAEHHLPS 185
           SWEKIAE  LPS
Sbjct: 181 SWEKIAEQDLPS 191

[Close]

BLAST of Sed0002907 vs. NCBI nr
Match: KAG7034670.1 (Cyclic phosphodiesterase, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 268.9 bits (686), Expect = 3.4e-68
Identity = 135/192 (70.31%), Postives = 154/192 (80.21%), Query Frame = 0


Query: 1   MANPEP--------GKNTYTVFALPPDDVAARIQTLMDSLRSEFGGPQFIPHITVVGPIH 60
           MANPE          KN Y+V+ALPP+DV ARI+TLM+SLRSEFGGPQF PHITVVG I 
Sbjct: 1   MANPESTPIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIR 60

Query: 61  LTPDDALDKFQSACEGLKAYQATVDRVATGVLYYQCVYLHFYPTTEVMETSSHCCQYFGY 120
           LT DDAL+KF+SACEGLKAYQATVD V+TG  +YQCV+L  +PTT+V+ETSSHCC +FG 
Sbjct: 61  LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTTQVVETSSHCCGHFGC 120

Query: 121 EDSTPYMPHLSLLYGNLSDEKKEQAKETVNKLDETIADLSFSVTRLALYKTGNGDGTPLK 180
            +STPYMPHLSLLY N+SDE+K+QAKE   KLDE I  LSF +TRLALYKT  GD T LK
Sbjct: 121 NNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDET-LK 180

Query: 181 SWEKIAEHHLPS 185
           SWEKIAE  LPS
Sbjct: 181 SWEKIAEQDLPS 191

[Close]

BLAST of Sed0002907 vs. ExPASy Swiss-Prot
Match: O04147 (Cyclic phosphodiesterase OS=Arabidopsis thaliana OX=3702 GN=At4g18930 PE=1 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 4.1e-45
Identity = 88/174 (50.57%), Postives = 120/174 (68.97%), Query Frame = 0


Query: 5   EPGKNTYTVFALPPDDVAARIQTLMDSLRSEFGGPQFIPHITVVGPIHLTPDDALDKFQS 64
           E  K+ Y+V+ALP ++   R + LM++LRSEF GP+F+PH+TV    +LT D+A   F+S
Sbjct: 3   EVKKDVYSVWALPDEESEPRFKKLMEALRSEFTGPRFVPHVTVAVSAYLTADEAKKMFES 62

Query: 65  ACEGLKAYQATVDRVATGVLYYQCVYLHFYPTTEVMETSSHCCQYFGYEDSTPYMPHLSL 124
           AC+GLKAY ATVDRV+TG  ++QCV+L    T EVME   HC  +F    +TPYMPHLSL
Sbjct: 63  ACDGLKAYTATVDRVSTGTFFFQCVFLLLQTTPEVMEAGEHCKNHFNCSTTTPYMPHLSL 122

Query: 125 LYGNLSDEKKEQAKETVNKLDETIADLSFSVTRLALYKTGNGDGTPLKSWEKIA 179
           LY  L++E+K+ A+E    LD ++  LSF + RLAL KT   D T L++WE +A
Sbjct: 123 LYAELTEEEKKNAQEKAYTLDSSLDGLSFRLNRLALCKTDTEDKT-LETWETVA 175

[Close]

BLAST of Sed0002907 vs. ExPASy TrEMBL
Match: A0A6J1INY2 (cyclic phosphodiesterase-like OS=Cucurbita maxima OX=3661 GN=LOC111478628 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 8.6e-70
Identity = 137/192 (71.35%), Postives = 156/192 (81.25%), Query Frame = 0


Query: 1   MANPEP--------GKNTYTVFALPPDDVAARIQTLMDSLRSEFGGPQFIPHITVVGPIH 60
           MANPE          KN Y+V+ALPP+DV ARI+TLM+SLRSEFGGPQF PHITVVG I 
Sbjct: 1   MANPESPTIQPSEGEKNVYSVWALPPEDVTARIRTLMNSLRSEFGGPQFEPHITVVGAIR 60

Query: 61  LTPDDALDKFQSACEGLKAYQATVDRVATGVLYYQCVYLHFYPTTEVMETSSHCCQYFGY 120
           LT DDAL+KF+SACEGLKAYQATVD V+TG  +YQCV+L  +PTT+V+ETSSHCC +FGY
Sbjct: 61  LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTTQVVETSSHCCGHFGY 120

Query: 121 EDSTPYMPHLSLLYGNLSDEKKEQAKETVNKLDETIADLSFSVTRLALYKTGNGDGTPLK 180
           ++STPYMPHLSLLY N+SDE+K+QAKE   KLDE I  LSF VTRLALYKT  GD T LK
Sbjct: 121 KNSTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPVTRLALYKTDTGDET-LK 180

Query: 181 SWEKIAEHHLPS 185
           SWEKIAE  LPS
Sbjct: 181 SWEKIAEQDLPS 191

[Close]

BLAST of Sed0002907 vs. ExPASy TrEMBL
Match: A0A6J1EGC1 (cyclic phosphodiesterase-like OS=Cucurbita moschata OX=3662 GN=LOC111433116 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.1e-67
Identity = 135/192 (70.31%), Postives = 155/192 (80.73%), Query Frame = 0


Query: 1   MANPEP--------GKNTYTVFALPPDDVAARIQTLMDSLRSEFGGPQFIPHITVVGPIH 60
           MANPE          KN Y+V+ALPP+DV ARI+TLM+SLRSEFGGPQF PHITVVG I 
Sbjct: 1   MANPESTPIQPSEGEKNVYSVWALPPEDVMARIRTLMNSLRSEFGGPQFEPHITVVGAIR 60

Query: 61  LTPDDALDKFQSACEGLKAYQATVDRVATGVLYYQCVYLHFYPTTEVMETSSHCCQYFGY 120
           LT DDAL+KF+SACEGLKAYQATVD V+TG  +YQCV+L  +PTT+V+ETSSHCC +FGY
Sbjct: 61  LTLDDALNKFRSACEGLKAYQATVDCVSTGTFFYQCVFLLIHPTTQVVETSSHCCGHFGY 120

Query: 121 EDSTPYMPHLSLLYGNLSDEKKEQAKETVNKLDETIADLSFSVTRLALYKTGNGDGTPLK 180
           + +TPYMPHLSLLY N+SDE+K+QAKE   KLDE I  LSF +TRLALYKT  GD T LK
Sbjct: 121 K-NTPYMPHLSLLYANISDEQKKQAKELAEKLDEAINGLSFPITRLALYKTDTGDET-LK 180

Query: 181 SWEKIAEHHLPS 185
           SWEKIAE  LPS
Sbjct: 181 SWEKIAEQDLPS 190

[Close]

BLAST of Sed0002907 vs. ExPASy TrEMBL
Match: A0A6J1EEQ8 (cyclic phosphodiesterase-like OS=Cucurbita moschata OX=3662 GN=LOC111433501 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 7.1e-64
Identity = 126/190 (66.32%), Postives = 151/190 (79.47%), Query Frame = 0


Query: 1   MANP-----EPGK-NTYTVFALPPDDVAARIQTLMDSLRSEFGGPQFIPHITVVGPIHLT 60
           MANP     EP +   Y+V+ALPP+DVA +I +LM SLRSEFGGP+F PHITVVG I LT
Sbjct: 1   MANPNSAPIEPCEGELYSVWALPPEDVATKIISLMSSLRSEFGGPEFEPHITVVGAIRLT 60

Query: 61  PDDALDKFQSACEGLKAYQATVDRVATGVLYYQCVYLHFYPTTEVMETSSHCCQYFGYED 120
           P DAL+KF+SACEG+KAYQATVD+V+ G  +YQCV+L  +PTTEV++ SSHCC +FGY +
Sbjct: 61  PQDALNKFRSACEGVKAYQATVDQVSIGTTFYQCVFLLIHPTTEVVQISSHCCGHFGYNN 120

Query: 121 STPYMPHLSLLYGNLSDEKKEQAKETVNKLDETIADLSFSVTRLALYKTGNGDGTPLKSW 180
           STPYMPHLSLLY N+SDE K++AKE  +KL+E +  L   VTRLALYKT  GD T LKSW
Sbjct: 121 STPYMPHLSLLYANISDEMKKRAKEIADKLNEAVNGLKVPVTRLALYKTDTGDET-LKSW 180

Query: 181 EKIAEHHLPS 185
           EKIAEH LPS
Sbjct: 181 EKIAEHDLPS 189

[Close]

BLAST of Sed0002907 vs. ExPASy TrEMBL
Match: A0A1S3AYZ1 (cyclic phosphodiesterase-like OS=Cucumis melo OX=3656 GN=LOC103484419 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 9.2e-64
Identity = 122/192 (63.54%), Postives = 151/192 (78.65%), Query Frame = 0


Query: 1   MANPEPGK--------NTYTVFALPPDDVAARIQTLMDSLRSEFGGPQFIPHITVVGPIH 60
           M NPE           N Y+V+ALPP+DV+ARI+ LM+SLRSEFGGPQF PHITVVG I 
Sbjct: 1   MVNPESASIQSSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPQFEPHITVVGAIR 60

Query: 61  LTPDDALDKFQSACEGLKAYQATVDRVATGVLYYQCVYLHFYPTTEVMETSSHCCQYFGY 120
           LT +DAL+KF +AC+G+KAYQATVD V+TG  +YQCV+L  +PTTEV+ETSSH C++FG+
Sbjct: 61  LTAEDALNKFLTACQGIKAYQATVDHVSTGTFFYQCVFLLIHPTTEVVETSSHFCKHFGF 120

Query: 121 EDSTPYMPHLSLLYGNLSDEKKEQAKETVNKLDETIADLSFSVTRLALYKTGNGDGTPLK 180
           ++STPYMPH+SLLY ++SDEKK+QAKE  +KLDE +  L F +TRLAL+KT   D T LK
Sbjct: 121 KNSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLKFPITRLALWKTDTSDET-LK 180

Query: 181 SWEKIAEHHLPS 185
           SWEKI EH L S
Sbjct: 181 SWEKIVEHDLSS 191

[Close]

BLAST of Sed0002907 vs. ExPASy TrEMBL
Match: A0A172WY69 (Cyclic phosphodiesterase-like protein 1 OS=Ziziphus jujuba OX=326968 GN=LOC107412840 PE=2 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.6e-63
Identity = 122/184 (66.30%), Postives = 151/184 (82.07%), Query Frame = 0


Query: 1   MANPEPGKNTYTVFALPPDDVAARIQTLMDSLRSEFGGPQFIPHITVVGPIHLTPDDALD 60
           +A+P+  KN Y+V+A+PPDDVAAR++ LM+ LR+EFGGPQF PHITVVG I LT DDA+ 
Sbjct: 8   IADPQSEKNVYSVWAIPPDDVAARLKKLMEGLRAEFGGPQFEPHITVVGAISLTADDAVA 67

Query: 61  KFQSACEGLKAYQATVDRVATGVLYYQCVYLHFYPTTEVMETSSHCCQYFGYEDSTPYMP 120
           KF+SACEGLKAY ATV+RVATG  +YQCVYL  +PT +V+ETS+HC  +FGY+ STPYMP
Sbjct: 68  KFRSACEGLKAYTATVERVATGTFFYQCVYLLIHPTPQVVETSTHCTGHFGYKSSTPYMP 127

Query: 121 HLSLLYGNLSDEKKEQAKETVNKLDETIADLSFSVTRLALYKTGNGDGTPLKSWEKIAEH 180
           HLSLLYG+LS+++K++A+E  N LDE+I+ LSF VTRLALYKT   D T LKSWEKI E 
Sbjct: 128 HLSLLYGDLSEDEKKKAQEKANILDESISGLSFQVTRLALYKTDTEDKT-LKSWEKITEC 187

Query: 181 HLPS 185
            L S
Sbjct: 188 TLDS 190

[Close]

BLAST of Sed0002907 vs. TAIR 10
Match: AT4G18930.1 (RNA ligase/cyclic nucleotide phosphodiesterase family protein )

HSP 1 Score: 182.6 bits (462), Expect = 2.9e-46
Identity = 88/174 (50.57%), Postives = 120/174 (68.97%), Query Frame = 0


Query: 5   EPGKNTYTVFALPPDDVAARIQTLMDSLRSEFGGPQFIPHITVVGPIHLTPDDALDKFQS 64
           E  K+ Y+V+ALP ++   R + LM++LRSEF GP+F+PH+TV    +LT D+A   F+S
Sbjct: 3   EVKKDVYSVWALPDEESEPRFKKLMEALRSEFTGPRFVPHVTVAVSAYLTADEAKKMFES 62

Query: 65  ACEGLKAYQATVDRVATGVLYYQCVYLHFYPTTEVMETSSHCCQYFGYEDSTPYMPHLSL 124
           AC+GLKAY ATVDRV+TG  ++QCV+L    T EVME   HC  +F    +TPYMPHLSL
Sbjct: 63  ACDGLKAYTATVDRVSTGTFFFQCVFLLLQTTPEVMEAGEHCKNHFNCSTTTPYMPHLSL 122

Query: 125 LYGNLSDEKKEQAKETVNKLDETIADLSFSVTRLALYKTGNGDGTPLKSWEKIA 179
           LY  L++E+K+ A+E    LD ++  LSF + RLAL KT   D T L++WE +A
Sbjct: 123 LYAELTEEEKKNAQEKAYTLDSSLDGLSFRLNRLALCKTDTEDKT-LETWETVA 175

[Close]

BLAST of Sed0002907 vs. TAIR 10
Match: AT4G18940.1 (RNA ligase/cyclic nucleotide phosphodiesterase family protein )

HSP 1 Score: 157.9 bits (398), Expect = 7.8e-39
Identity = 81/182 (44.51%), Postives = 113/182 (62.09%), Query Frame = 0


Query: 5   EPGKNTYTVFALPPDDVAARIQTLMDSLRSEFGGPQFIPHITVVGPI--HLTPDDALDKF 64
           E  K  Y ++A+P DDV  R+Q LM+ LRSEFGGP F PH+T+VGP    LT  +A   F
Sbjct: 19  EEEKAMYAIWAVPEDDVEDRLQRLMEGLRSEFGGPAFDPHLTLVGPFPYKLTASEAKRMF 78

Query: 65  QSACEGLKAYQATVDRVATGVLYYQCVYLHFYPTTEVMETSSHCCQYFGYEDSTPYMPHL 124
           +SACEG K Y ATVD+V+ G  Y+QC+Y+    T EVM  + H   +F       Y+PH+
Sbjct: 79  KSACEGFKVYPATVDQVSAGTSYFQCLYVSLRHTVEVMNAAGHFMAHFKPFTGKFYVPHM 138

Query: 125 SLLYGNLSDEKKEQAKETVNKLDETIADLSFSVTRLALYKTGNGDGTPLKSWEKIAEHHL 184
           S+LYG+L++ +K++A E    LD ++  L+F + R+AL+ T    G    SW K+ EH L
Sbjct: 139 SILYGDLTEREKKKALEKAYTLDSSLDGLNFKINRVALWITDADVG----SWVKVDEHTL 196

The following BLAST results are available for this feature:

BLAST of Sed0002907 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022978766.1	1.8e-69	71.35	cyclic phosphodiesterase-like [Cucurbita maxima]	[more]
XP_023543945.1	2.3e-69	70.83	cyclic phosphodiesterase-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
KAG6581386.1	4.0e-69	70.83	Cyclic phosphodiesterase, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023522563.1	5.2e-69	70.83	cyclic phosphodiesterase-like [Cucurbita pepo subsp. pepo] >XP_023543944.1 cycli...	[more]
KAG7034670.1	3.4e-68	70.31	Cyclic phosphodiesterase, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Sed0002907 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04147	4.1e-45	50.57	Cyclic phosphodiesterase OS=Arabidopsis thaliana OX=3702 GN=At4g18930 PE=1 SV=1	[more]

BLAST of Sed0002907 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1INY2	8.6e-70	71.35	cyclic phosphodiesterase-like OS=Cucurbita maxima OX=3661 GN=LOC111478628 PE=4 S...	[more]
A0A6J1EGC1	1.1e-67	70.31	cyclic phosphodiesterase-like OS=Cucurbita moschata OX=3662 GN=LOC111433116 PE=4...	[more]
A0A6J1EEQ8	7.1e-64	66.32	cyclic phosphodiesterase-like OS=Cucurbita moschata OX=3662 GN=LOC111433501 PE=4...	[more]
A0A1S3AYZ1	9.2e-64	63.54	cyclic phosphodiesterase-like OS=Cucumis melo OX=3656 GN=LOC103484419 PE=4 SV=1	[more]
A0A172WY69	1.6e-63	66.30	Cyclic phosphodiesterase-like protein 1 OS=Ziziphus jujuba OX=326968 GN=LOC10741...	[more]

BLAST of Sed0002907 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G18930.1	2.9e-46	50.57	RNA ligase/cyclic nucleotide phosphodiesterase family protein	[more]
AT4G18940.1	7.8e-39	44.51	RNA ligase/cyclic nucleotide phosphodiesterase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012386	2',3'-cyclic-nucleotide 3'-phosphodiesterase	PIRSF	PIRSF017903	CPDase_plant	coord: 2..184 e-value: 1.5E-62 score: 208.6
IPR012386	2',3'-cyclic-nucleotide 3'-phosphodiesterase	PANTHER	PTHR28141	2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE	coord: 6..182
None	No IPR available	PFAM	PF13563	2_5_RNA_ligase2	coord: 17..165 e-value: 4.7E-12 score: 46.1
None	No IPR available	GENE3D	3.90.1140.10	Cyclic phosphodiesterase	coord: 5..184 e-value: 3.1E-52 score: 178.8
None	No IPR available	PANTHER	PTHR28141:SF1	2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE	coord: 6..182
IPR009097	Cyclic phosphodiesterase	SUPERFAMILY	55144	LigT-like	coord: 9..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002907.1	Sed0002907.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009187	cyclic nucleotide metabolic process
molecular_function	GO:0004113	2',3'-cyclic-nucleotide 3'-phosphodiesterase activity
molecular_function	GO:0004112	cyclic-nucleotide phosphodiesterase activity