Sed0002899 (gene) Chayote v1

Overview


Name	Sed0002899
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Auxin-responsive protein
Location	LG06: 45575735 .. 45578963 (+)
RNA-Seq Expression	Sed0002899
Synteny	Sed0002899

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGAAAAAGAGAAAATAAGTAAGAAAAAAAAAACAAACTTTTTGGAGAGAAAAAGAGAATTGGTATCTTTTTAGCACGCTTTGCTTCCTGAGCTGAGTAATCCACCATTATCTATTTTTGTTTTTTGTTGCGTCAATAATTCTCTAAACCCTCTTTTAGGTTTTTTTGCCCTTTTCATCTCAATTTCTTCCCCTTTTTAAAACCAATCTTCACTCATTAAGCTCAACAAACAAATCCATTCTTCCAAAATCAACCCAACTTTTTCTCTTTTGGTTCTTTTCTGATTGTTCTTCTCAGAATTTCCCACTTGGGTTCTGTTTATTTTGATCTTTTCTTCAAGATTTCGCCTGATTTCTCTGCAAATTTCACAACCCAATTCGTAATTTCTGATTTCCCCATCTGGGTTTTGTTCAAAACCCCCAAATCTTTCAATGGAGATGAAAGGGTGTTCTGAGGAAGACGGGGATCGTCCTCGGCTGTTAAATTTCATCCCCAATCACCGGCAATGGCTTTCCGCCGGAGATGTCGCCGGAAAACCCCAAATCTCCGACGAAAACAAGCTTGAGCTGAAGCTTGGCCTTCCCGGAGAAGCCGATTGGTCCGGCGAAGGGAAGAATGATTCTGTTATCTCTTTTGGGGGTTTCCCTGTTTCTTCAAATTTCATTGGAAAGCTTCATCAACCCTCTAAGATTTCACCATTTTGTTCTAAAATGGGAGATTTGGTTAATGCTGAAGCTAAATCATTTCATTCTTCTGTTAATGCAAACAGTTCTCAGAAAAGGTAGCCTCCTCTCTGCTTCTTTTTGGCACTTGGTTGGTTGGTATTATAATTTGAAGCATGTGTGTAAAGGACGAATGGTTTTTATGACTGGCTTGTGTTCTTGTGGTCCTTAATGGGTCTAGTTTTTTTTATCTTTACTTTGGCTGTTTGTGTTTTTGGGTATTGGTCATAATCAATGATTCACTTCAATGGGATCTTTTTGTAGCTAACTTTTGTTGAAATTTCTGAATTTAGATATGTGAATGAATTTGGCTTCAAAGGGTTGAGTTTTTGGTTTCCTTTTGATCTAGTGATAATGGACAAGTTGTTGAACAGTGGTTGTTGTTGTCTTTCTCTTAATTTGTTAGGTTTGCTATTAATGTCTTCTTGTTTGCTGTTCCTGTGTGTGTCAAAGCATAATATGTAAACAGCATTCTAAGAATAAAAGAAAGAACTAAAGACCAATAGTTACACAAATTTACTTGGAGTACTAATTTTGTGTTTGCTATGTCCACGGATAGATGAGAAAACGCTTTATTTACGAGACTTTGAAGAACACATCTTTTTTTTTTTAACATTACAAAAAGCACCTTCATTGAACAATATGCAAAGTGAGGCTAGATACAGTTTTGACTCCATAAAATTTTCAAGAGATAGAGATTTGTCCTTGAAAGTCCTTTGTTTCTTTACGGTCATTAGAGTTTTAAGAGAGGTTATATAGTTCATCAAACTCATACTGAATATTCATAGAGTGTTCAGGTCAACTTATACGTACCTCAACTATTTTCATGAGACATAGTGTCTGATCCTACAACATTTTTATATAAAAAAACCTGTAAAAAATTATTTTCTAAGTGGGTGACTACTATGGATTGAAGAGCCTCTTAATTATTTATGATACTCTTGACCATTGGGCATCCATGATTTTCAAGGGTGTGTTTGGACCATCGGTTTGGTTATGATAGACGGAAGGTTATGATAAATGGTGGGTTATTATAAATGGGTTTTGGGGGGCAAGTTATTATAACATGGATTATGATAAACGGTGTTTGAGGGGTTGGTTATGCAACAAAAAATATTATATGTAAGGTTTAGATAAACGGGCACGGAGGTTTAGGTAACCACCGTTTATAATAAACGGTGGGGCAAACATCGGTTGGGTTATTATAACCAACATGGCCGTTTACATAAACGGTTTCTTATTTCTTTGTCAATATACACTTTATTTTGAATCCTCTGGTTTCCAAGAATTAGGCAGCAATACACTAATAATTGTGCAACTTTCTGAATTAATACAAAGGGCTGCGCCTGCTCCAGTTGTGGGATGGCCACCAGTTCGATTGTCGAGAAGAAACCTTGCGAGCACCAGCTTCTCGAAGCCTATGTCGGAGACTTCGGATGCTGCTCCGAGCAAGCTCCCGTCTCTGGAGGAGAAACCGGTTAAAGTTGGTGGGAAGGGACTGTTTGTTAAAATCAATATGGATGGAGTTCCCATTGGTAGGAAGATAGATCTCAATGCTTATGACAACTATGAAAAACTTTCCACTGCTGTTGATGAACTTTTTAGAGGCTTACTTGCTGGTAATCATCACTAGAATTGTTCAAGTTTTGAATCAATTTTGTGTTTTTTTCTTGATGAAAATATCTAAATTTTCCTGTTTGTTCCTGTCTCTTGCAGCTCAAAAAGATTGCTCCAATGGTGGCATTTTGAACAAGCAAGAAGAAGACAAACTGATCACAGGGTTACTCGATGGAAGCGGGGAGTATACTCTTGTTTACGAAGATAATGAAGGCGACAGAGTTCTCGTTGGCGATGTCCCCTGGCAGTAAGCACCTTTCAACATTTCGATTCTTTTGTTTCAATATTTTTAACATTGAATTAAGTGAAGAACATGTTCGTCTCAGCATAAATAACAGTAGAACTTGTTTAACTTAATCCTCTCTCAGAATGTTCGTTTCGACCGCCAAGAGGCTGCGTGTGCTGAAGACATCTGAATTACCCGCCTTGAGTAGTGAGTTCAAACACAATTAACTTTTTTTGTTTTCCACGTTTGATGCGTCGATTTTCATTAAATCTCGGGTGTTTTGTTTGATAACAGTCGGTTGCTCGAAGCAACAGAAGATGTCGATAGACTCTGCCACAAAGTGAAGGAAGAGATCGATTTCGTAAGCTGCTGAAGCCTTTGAATGTGTTACCTTCTAAAATTTAAAATGTGGCATCAAAGTGTATTAGATTGAGAAAAGAGTAAAAATAGAATTATGATTATTGGTAACATAGCTTAATCATTCCCAAAGAATAATGGGGTTATGCTTTTGATTCTGTAATTGTAATGTAAAATCAACCAAACAAGTGAGTGATTTTGGAGTTTTAATATAAATTCCAATTGGAGAAACATATCATTCTCCAATACTATTTAAGTAGTGATTGGTTTATCATCTATACAATGTTGTCAAATGTTTTGATTTGGT

mRNA sequence

CAGAAAAAGAGAAAATAAGTAAGAAAAAAAAAACAAACTTTTTGGAGAGAAAAAGAGAATTGGTATCTTTTTAGCACGCTTTGCTTCCTGAGCTGAGTAATCCACCATTATCTATTTTTGTTTTTTGTTGCGTCAATAATTCTCTAAACCCTCTTTTAGGTTTTTTTGCCCTTTTCATCTCAATTTCTTCCCCTTTTTAAAACCAATCTTCACTCATTAAGCTCAACAAACAAATCCATTCTTCCAAAATCAACCCAACTTTTTCTCTTTTGGTTCTTTTCTGATTGTTCTTCTCAGAATTTCCCACTTGGGTTCTGTTTATTTTGATCTTTTCTTCAAGATTTCGCCTGATTTCTCTGCAAATTTCACAACCCAATTCGTAATTTCTGATTTCCCCATCTGGGTTTTGTTCAAAACCCCCAAATCTTTCAATGGAGATGAAAGGGTGTTCTGAGGAAGACGGGGATCGTCCTCGGCTGTTAAATTTCATCCCCAATCACCGGCAATGGCTTTCCGCCGGAGATGTCGCCGGAAAACCCCAAATCTCCGACGAAAACAAGCTTGAGCTGAAGCTTGGCCTTCCCGGAGAAGCCGATTGGTCCGGCGAAGGGAAGAATGATTCTGTTATCTCTTTTGGGGGTTTCCCTGTTTCTTCAAATTTCATTGGAAAGCTTCATCAACCCTCTAAGATTTCACCATTTTGTTCTAAAATGGGAGATTTGGTTAATGCTGAAGCTAAATCATTTCATTCTTCTGTTAATGCAAACAGTTCTCAGAAAAGGGCTGCGCCTGCTCCAGTTGTGGGATGGCCACCAGTTCGATTGTCGAGAAGAAACCTTGCGAGCACCAGCTTCTCGAAGCCTATGTCGGAGACTTCGGATGCTGCTCCGAGCAAGCTCCCGTCTCTGGAGGAGAAACCGGTTAAAGTTGGTGGGAAGGGACTGTTTGTTAAAATCAATATGGATGGAGTTCCCATTGGTAGGAAGATAGATCTCAATGCTTATGACAACTATGAAAAACTTTCCACTGCTGTTGATGAACTTTTTAGAGGCTTACTTGCTGCTCAAAAAGATTGCTCCAATGGTGGCATTTTGAACAAGCAAGAAGAAGACAAACTGATCACAGGGTTACTCGATGGAAGCGGGGAGTATACTCTTGTTTACGAAGATAATGAAGGCGACAGAGTTCTCGTTGGCGATGTCCCCTGGCAAATGTTCGTTTCGACCGCCAAGAGGCTGCGTGTGCTGAAGACATCTGAATTACCCGCCTTGAGTATCGGTTGCTCGAAGCAACAGAAGATGTCGATAGACTCTGCCACAAAGTGAAGGAAGAGATCGATTTCGTAAGCTGCTGAAGCCTTTGAATGTGTTACCTTCTAAAATTTAAAATGTGGCATCAAAGTGTATTAGATTGAGAAAAGAGTAAAAATAGAATTATGATTATTGGTAACATAGCTTAATCATTCCCAAAGAATAATGGGGTTATGCTTTTGATTCTGTAATTGTAATGTAAAATCAACCAAACAAGTGAGTGATTTTGGAGTTTTAATATAAATTCCAATTGGAGAAACATATCATTCTCCAATACTATTTAAGTAGTGATTGGTTTATCATCTATACAATGTTGTCAAATGTTTTGATTTGGT

Coding sequence (CDS)

ATGGAGATGAAAGGGTGTTCTGAGGAAGACGGGGATCGTCCTCGGCTGTTAAATTTCATCCCCAATCACCGGCAATGGCTTTCCGCCGGAGATGTCGCCGGAAAACCCCAAATCTCCGACGAAAACAAGCTTGAGCTGAAGCTTGGCCTTCCCGGAGAAGCCGATTGGTCCGGCGAAGGGAAGAATGATTCTGTTATCTCTTTTGGGGGTTTCCCTGTTTCTTCAAATTTCATTGGAAAGCTTCATCAACCCTCTAAGATTTCACCATTTTGTTCTAAAATGGGAGATTTGGTTAATGCTGAAGCTAAATCATTTCATTCTTCTGTTAATGCAAACAGTTCTCAGAAAAGGGCTGCGCCTGCTCCAGTTGTGGGATGGCCACCAGTTCGATTGTCGAGAAGAAACCTTGCGAGCACCAGCTTCTCGAAGCCTATGTCGGAGACTTCGGATGCTGCTCCGAGCAAGCTCCCGTCTCTGGAGGAGAAACCGGTTAAAGTTGGTGGGAAGGGACTGTTTGTTAAAATCAATATGGATGGAGTTCCCATTGGTAGGAAGATAGATCTCAATGCTTATGACAACTATGAAAAACTTTCCACTGCTGTTGATGAACTTTTTAGAGGCTTACTTGCTGCTCAAAAAGATTGCTCCAATGGTGGCATTTTGAACAAGCAAGAAGAAGACAAACTGATCACAGGGTTACTCGATGGAAGCGGGGAGTATACTCTTGTTTACGAAGATAATGAAGGCGACAGAGTTCTCGTTGGCGATGTCCCCTGGCAAATGTTCGTTTCGACCGCCAAGAGGCTGCGTGTGCTGAAGACATCTGAATTACCCGCCTTGAGTATCGGTTGCTCGAAGCAACAGAAGATGTCGATAGACTCTGCCACAAAGTGA

Protein sequence

MEMKGCSEEDGDRPRLLNFIPNHRQWLSAGDVAGKPQISDENKLELKLGLPGEADWSGEGKNDSVISFGGFPVSSNFIGKLHQPSKISPFCSKMGDLVNAEAKSFHSSVNANSSQKRAAPAPVVGWPPVRLSRRNLASTSFSKPMSETSDAAPSKLPSLEEKPVKVGGKGLFVKINMDGVPIGRKIDLNAYDNYEKLSTAVDELFRGLLAAQKDCSNGGILNKQEEDKLITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFVSTAKRLRVLKTSELPALSIGCSKQQKMSIDSATK

Homology

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BLAST of Sed0002899 vs. NCBI nr
Match: XP_038878199.1 (auxin-responsive protein IAA26-like [Benincasa hispida])

HSP 1 Score: 452.2 bits (1162), Expect = 3.4e-123
Identity = 232/313 (74.12%), Postives = 264/313 (84.35%), Query Frame = 0


Query: 1   MEMKGCSEEDGDRPRLLNFIPNHRQWLSAGDVAGKPQISDENKLELKLGLPGEADWSGEG 60
           MEM GCSE+D D P+LL+ IP  RQWL+AGDVAGK Q SD+ KLEL+LGLPGEADWSG+G
Sbjct: 1   MEMNGCSEKDEDYPQLLDLIPKDRQWLAAGDVAGKTQTSDDKKLELRLGLPGEADWSGKG 60

Query: 61  KNDSVISFGGFPV-------------SSNFIGKLHQPSKISPFCSKMGDLVNAEAKSFHS 120
           ++DSV SFG FPV             S NF+GKL QP+K+S FC++MGDL NAEAKSF S
Sbjct: 61  RDDSVRSFGYFPVSRKFSPSESPWPPSPNFLGKL-QPTKLSAFCTEMGDLQNAEAKSFPS 120

Query: 121 SVN---ANSSQKRAAPAPVVGWPPVRLSRRNLASTSFSKPMSETSDAAPSKLPSLEEKPV 180
           S N    NSSQKR APAPVVGWPP+R SRRNLAS+SFSKP SE+SDA PSKLP+  EK V
Sbjct: 121 SANTAVCNSSQKRTAPAPVVGWPPIRSSRRNLASSSFSKPASESSDATPSKLPAPGEKAV 180

Query: 181 KVGGKGLFVKINMDGVPIGRKIDLNAYDNYEKLSTAVDELFRGLLAAQKDCSNGGILNKQ 240
           +VGGKGLFVKINMDGVPIGRKIDLNAYD+YEKLS+AVDELFRGLLAAQ+D S G +LNKQ
Sbjct: 181 EVGGKGLFVKINMDGVPIGRKIDLNAYDSYEKLSSAVDELFRGLLAAQRDSSAGSVLNKQ 240

Query: 241 EEDKLITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFVSTAKRLRVLKTSELPALSIGC 298
           EE+K ITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFVST KRLRVLK+SELP+LS+ C
Sbjct: 241 EEEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFVSTVKRLRVLKSSELPSLSLCC 300

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BLAST of Sed0002899 vs. NCBI nr
Match: XP_008447559.1 (PREDICTED: auxin-responsive protein IAA26-like [Cucumis melo] >KAA0050850.1 auxin-responsive protein IAA26-like [Cucumis melo var. makuwa] >TYK08501.1 auxin-responsive protein IAA26-like [Cucumis melo var. makuwa])

HSP 1 Score: 446.4 bits (1147), Expect = 1.9e-121
Identity = 234/327 (71.56%), Postives = 260/327 (79.51%), Query Frame = 0


Query: 1   MEMKGCSEEDGDRPRLLNFIPNHRQWLSAGDVAGKPQISDENKLELKLGLPGEADWSGEG 60
           MEM GCSE+D D P+LL+ IP  RQWL+ GDVAGK   SD+ KLEL+LGLPGE DWSG+G
Sbjct: 1   MEMNGCSEKDEDYPQLLDLIPKDRQWLTTGDVAGKTNTSDDKKLELRLGLPGEGDWSGKG 60

Query: 61  KNDSVISFGGFPV-------------SSNFIGKLHQPSKIS--------------PFCSK 120
           + DSV SFG FPV             S NF+GKL QP+KIS              P C+K
Sbjct: 61  RGDSVPSFGYFPVSRKFSPSENPWPPSPNFLGKL-QPTKISGFCLSAMGKEGVSQPCCTK 120

Query: 121 MGDLVNAEAKSFHSSVN---ANSSQKRAAPAPVVGWPPVRLSRRNLASTSFSKPMSETSD 180
           MGDL NAEAK F SSVN   +NSSQKR APAPVVGWPP+R SRRNLAS+SFSKP SE++D
Sbjct: 121 MGDLQNAEAKPFPSSVNIAVSNSSQKRTAPAPVVGWPPIRSSRRNLASSSFSKPASESAD 180

Query: 181 AAPSKLPSLEEKPVKVGGKGLFVKINMDGVPIGRKIDLNAYDNYEKLSTAVDELFRGLLA 240
           A+PSKLP   EKPV VGGKGLFVKINMDGVPIGRKIDLNAYD+YEKLS+ VDELFRGLLA
Sbjct: 181 ASPSKLPGPGEKPVDVGGKGLFVKINMDGVPIGRKIDLNAYDSYEKLSSGVDELFRGLLA 240

Query: 241 AQKDCSNGGILNKQEEDKLITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFVSTAKRLR 298
           AQ+D S GG+LNKQEE+K ITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFVST KRLR
Sbjct: 241 AQRDSSGGGVLNKQEEEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFVSTVKRLR 300

[Close]

BLAST of Sed0002899 vs. NCBI nr
Match: XP_004150768.1 (auxin-responsive protein IAA26 isoform X2 [Cucumis sativus] >KGN58028.1 hypothetical protein Csa_011089 [Cucumis sativus])

HSP 1 Score: 444.5 bits (1142), Expect = 7.2e-121
Identity = 234/327 (71.56%), Postives = 260/327 (79.51%), Query Frame = 0


Query: 1   MEMKGCSEEDGDRPRLLNFIPNHRQWLSAGDVAGKPQISDENKLELKLGLPGEADWSGEG 60
           M M GCSE+D D P+LL+ IP  RQWL+ GDVAGK   SD+ KLEL+LGLPGE DWSG+G
Sbjct: 1   MGMNGCSEKDEDYPQLLDLIPKDRQWLATGDVAGKANTSDDKKLELRLGLPGEGDWSGKG 60

Query: 61  KNDSVISFGGFPVS-------------SNFIGKLHQPSKIS--------------PFCSK 120
           ++DSV SFG FPVS              NF+GKL QP+KIS              P C+K
Sbjct: 61  RDDSVPSFGYFPVSRKFTPSENPWPPHPNFLGKL-QPTKISGFCLSAMGKEGVSQPCCTK 120

Query: 121 MGDLVNAEAKSFHSSVN---ANSSQKRAAPAPVVGWPPVRLSRRNLASTSFSKPMSETSD 180
           MGDL NAEAK F SSVN   +NSSQKR APAPVVGWPP+R SRRN+AS+SFSKP SE+SD
Sbjct: 121 MGDLHNAEAKPFPSSVNIAVSNSSQKRTAPAPVVGWPPIRSSRRNIASSSFSKPASESSD 180

Query: 181 AAPSKLPSLEEKPVKVGGKGLFVKINMDGVPIGRKIDLNAYDNYEKLSTAVDELFRGLLA 240
           A+PSKLP   EKPV VGGKGLFVKINMDGVPIGRKIDLNAYD+YEKLS  VDELFRGLLA
Sbjct: 181 ASPSKLPGPGEKPVDVGGKGLFVKINMDGVPIGRKIDLNAYDSYEKLSFGVDELFRGLLA 240

Query: 241 AQKDCSNGGILNKQEEDKLITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFVSTAKRLR 298
           AQ+D S GG+LNKQEE+K ITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFVSTAKRLR
Sbjct: 241 AQRDSSGGGVLNKQEEEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFVSTAKRLR 300

[Close]

BLAST of Sed0002899 vs. NCBI nr
Match: XP_022153649.1 (auxin-responsive protein IAA26-like [Momordica charantia])

HSP 1 Score: 438.7 bits (1127), Expect = 3.9e-119
Identity = 227/327 (69.42%), Postives = 262/327 (80.12%), Query Frame = 0


Query: 1   MEMKGCSEEDGDRPRLLNFIPNHRQWLSAGDVAGKPQISDENKLELKLGLPGEADWSGEG 60
           ME+ GCSE+D D PRLL+ IP  RQW++ GDV GK   SD+ KLEL+LGLPGEADW G+ 
Sbjct: 1   MEINGCSEKDEDCPRLLDLIPKDRQWVTTGDVVGKIHSSDDKKLELRLGLPGEADWCGKE 60

Query: 61  KNDSVISFGGFP------------VSSNFIGKLHQPSKIS---------------PFCSK 120
           +++S + FG FP             S+NF+GKL QP+K+S               P C+K
Sbjct: 61  RDESPLCFGYFPHPQKFSSTENPWPSANFLGKL-QPTKLSTFHLSAMAKETAGSQPCCTK 120

Query: 121 MGDLVNAEAKSFHSSVN---ANSSQKRAAPAPVVGWPPVRLSRRNLASTSFSKPMSETSD 180
           MGDL NAEAK F SS N   +NSSQKR APAPVVGWPP+R SRRNLAS+SFSKP SE+ D
Sbjct: 121 MGDLQNAEAKPFPSSANTAVSNSSQKRTAPAPVVGWPPIRSSRRNLASSSFSKPASESLD 180

Query: 181 AAPSKLPSLEEKPVKVGGKGLFVKINMDGVPIGRKIDLNAYDNYEKLSTAVDELFRGLLA 240
           AAPSKLP+  EKPV+VGGKGLFVKINMDGVPIGRKIDLNAYD+Y+KLS+AVDELFRGLLA
Sbjct: 181 AAPSKLPAPREKPVEVGGKGLFVKINMDGVPIGRKIDLNAYDSYDKLSSAVDELFRGLLA 240

Query: 241 AQKDCSNGGILNKQEEDKLITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFVSTAKRLR 298
           AQ+D S GG+LNKQEE+K ITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFVST KRLR
Sbjct: 241 AQRDSSGGGVLNKQEEEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFVSTVKRLR 300

[Close]

BLAST of Sed0002899 vs. NCBI nr
Match: XP_031738916.1 (auxin-responsive protein IAA26 isoform X1 [Cucumis sativus])

HSP 1 Score: 437.2 bits (1123), Expect = 1.1e-118
Identity = 234/335 (69.85%), Postives = 260/335 (77.61%), Query Frame = 0


Query: 1   MEMKGCSEEDGDRPRLLNFIPNHRQWLSAGDVAGKPQISDENKLELKLGLPGEADWSGEG 60
           M M GCSE+D D P+LL+ IP  RQWL+ GDVAGK   SD+ KLEL+LGLPGE DWSG+G
Sbjct: 1   MGMNGCSEKDEDYPQLLDLIPKDRQWLATGDVAGKANTSDDKKLELRLGLPGEGDWSGKG 60

Query: 61  KNDSVISFGGFPVS-------------SNFIGKLHQPSKIS--------------PFCSK 120
           ++DSV SFG FPVS              NF+GKL QP+KIS              P C+K
Sbjct: 61  RDDSVPSFGYFPVSRKFTPSENPWPPHPNFLGKL-QPTKISGFCLSAMGKEGVSQPCCTK 120

Query: 121 MGDLVNAEAKSFHSSVN---ANSSQKRAAPAPVVGWPPVRLSRRNLASTSFSKPMSETSD 180
           MGDL NAEAK F SSVN   +NSSQKR APAPVVGWPP+R SRRN+AS+SFSKP SE+SD
Sbjct: 121 MGDLHNAEAKPFPSSVNIAVSNSSQKRTAPAPVVGWPPIRSSRRNIASSSFSKPASESSD 180

Query: 181 AAPSKLPSLEEKPVKVGGKGLFVKINMDGVPIGRKIDLNAYDNYEKLSTAVDELFRGLLA 240
           A+PSKLP   EKPV VGGKGLFVKINMDGVPIGRKIDLNAYD+YEKLS  VDELFRGLLA
Sbjct: 181 ASPSKLPGPGEKPVDVGGKGLFVKINMDGVPIGRKIDLNAYDSYEKLSFGVDELFRGLLA 240

Query: 241 --------AQKDCSNGGILNKQEEDKLITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMF 298
                   AQ+D S GG+LNKQEE+K ITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMF
Sbjct: 241 GSLPKNFSAQRDSSGGGVLNKQEEEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMF 300

[Close]

BLAST of Sed0002899 vs. ExPASy Swiss-Prot
Match: Q8LAL2 (Auxin-responsive protein IAA26 OS=Arabidopsis thaliana OX=3702 GN=IAA26 PE=1 SV=2)

HSP 1 Score: 241.9 bits (616), Expect = 9.2e-63
Identity = 145/289 (50.17%), Postives = 186/289 (64.36%), Query Frame = 0


Query: 3   MKGCSEEDGDRPRLLNFIPNHRQWLSAGDVAGKPQISDENKLELKLGLPGEADWSGEGKN 62
           M+GC       P+LL+ IP  R+W        K     E KLEL+LG PG     G+ ++
Sbjct: 1   MEGCPRNREIGPKLLDLIPQGRKWYQ----EDKNNTDQEKKLELRLGPPG-----GDEED 60

Query: 63  DSVISFGGFPVSSNFIGKLHQPSKISPFCSKMGDLVNAEAKSFHSSVNANSSQKRAAPAP 122
            S I        +  I  + + ++   F    G+  +   K+  +SV  + SQKR AP P
Sbjct: 61  HSAIK-----KKNTEIRNIKKETEDKSFHCFNGNHFSPSNKT--TSV-PHISQKRTAPGP 120

Query: 123 VVGWPPVRLSRRNLASTSFSKPMSETSDAAPSKLPSLEEKPVKVGGKGLFVKINMDGVPI 182
           VVGWPPVR  R+NLASTS SK  +E+S           EK V+   +G+FVKINMDGVPI
Sbjct: 121 VVGWPPVRSFRKNLASTSSSKLGNESSHGGQINKSDDGEKQVETKKEGMFVKINMDGVPI 180

Query: 183 GRKIDLNAYDNYEKLSTAVDELFRGLLAAQKDCSNGGILNKQEEDKLITGLLDGSGEYTL 242
           GRK+DLNAY++YE+LS  VD+LFRGLLAAQ+D S+G     Q E+K I GLLDG GE+TL
Sbjct: 181 GRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDG-----QGEEKPIIGLLDGKGEFTL 240

Query: 243 VYEDNEGDRVLVGDVPWQMFVSTAKRLRVLKTSEL-PALSIGCSKQQKM 291
            YEDNEGD++LVGDVPWQMFVS+ KRLRV+K+SE+  AL+ GCSKQ+KM
Sbjct: 241 TYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSEISSALTFGCSKQEKM 267

[Close]

BLAST of Sed0002899 vs. ExPASy Swiss-Prot
Match: O24408 (Auxin-responsive protein IAA18 OS=Arabidopsis thaliana OX=3702 GN=IAA18 PE=1 SV=2)

HSP 1 Score: 211.1 bits (536), Expect = 1.7e-53
Identity = 141/298 (47.32%), Postives = 180/298 (60.40%), Query Frame = 0


Query: 3   MKGCSEEDGDRPRLLN-FIPNHRQ-WLSAGDVAGKPQISDENKLELKLGLPGEADWSGEG 62
           M+G S      P+LL+  IP  R+ W    D       ++E KLELKLG PGE D     
Sbjct: 1   MEGYSRNGEISPKLLDLMIPQERRNWFH--DEKNSVFKTEEKKLELKLGPPGEED----- 60

Query: 63  KNDSVISFGGFPVSSNFIGKLHQPSKISPFCSKMGDLVNAEAKSFHSSVNANSSQKRAAP 122
            ++S+I                +  K  P   K   +++   K F  S    +S KR AP
Sbjct: 61  DDESMI----------------RHMKKEP---KDKSILSLAGKYFSPSSTKTTSHKRTAP 120

Query: 123 APVVGWPPVRLSRRNLASTSFSK--PMSETSDAAPSKLPSLE-----EKPVKVGGKGLFV 182
            PVVGWPPVR  R+NLAS S SK    S TS+    K    +      +P + G  G+FV
Sbjct: 121 GPVVGWPPVRSFRKNLASGSSSKLGNDSTTSNGVTLKNQKCDAAAKTTEPKRQG--GMFV 180

Query: 183 KINMDGVPIGRKIDLNAYDNYEKLSTAVDELFRGLLAAQKDCSNGGILNKQEEDKLITGL 242
           KINM GVPIGRK+DL+A+++YE+LS  VD+LFRGLLAAQ+D       +  E++K ITGL
Sbjct: 181 KINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQRD-----FPSSIEDEKPITGL 240

Query: 243 LDGSGEYTLVYEDNEGDRVLVGDVPWQMFVSTAKRLRVLKTSEL-PALSIGCSKQQKM 291
           LDG+GEYTL YEDNEGD++LVGDVPWQMFVS+ KRLRV+KTSE+  AL+ G  KQ+KM
Sbjct: 241 LDGNGEYTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSEISSALTYGNGKQEKM 265

[Close]

BLAST of Sed0002899 vs. ExPASy Swiss-Prot
Match: Q6H543 (Auxin-responsive protein IAA7 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA7 PE=2 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 9.0e-50
Identity = 127/276 (46.01%), Postives = 163/276 (59.06%), Query Frame = 0


Query: 34  GKPQISDENKLELKLGLPG---------------------EADWSGEGKNDSVISFGGFP 93
           G  Q  +E  LEL LGLPG                      A    +G   S++S G   
Sbjct: 31  GDEQEEEEKTLELSLGLPGGGWRAACRDKGTTTKHSIAAAAAADDDDGDKSSMLSLGYST 90

Query: 94  VSSNFIGKLHQPSKISPFCSKMGDLVNAEAKSFHSSVNANSSQKRAAPAPVVGWPPVRLS 153
           + S+  GK ++ +K SP   +      A   +  +S N    Q R+   PVVGWPPVR  
Sbjct: 91  LVSHSQGKANK-NKGSPE-EEEAHPPPATGNNALASNNNGCFQTRSPSTPVVGWPPVRTF 150

Query: 154 RRNLASTSFSKPMSETSDAAPSKLPSLEEKPVKVGGKGLFVKINMDGVPIGRKIDLNAYD 213
           RRNLA++S +    +    A +K   ++  P        F+KINMDGVPIGRKIDLNA+D
Sbjct: 151 RRNLATSSKASLELQNGKKA-AKAEEIKRAP--------FIKINMDGVPIGRKIDLNAFD 210

Query: 214 NYEKLSTAVDELFRGLLAAQKDCSNGGILNKQEEDKLITGLLDGSGEYTLVYEDNEGDRV 273
           +YEKLS AVD+LFRGLLAAQ+D    G  + Q+ED  I+GLLDG+GEYTLVYED EGD+V
Sbjct: 211 SYEKLSLAVDKLFRGLLAAQRDPLTAGAKDCQQEDVAISGLLDGTGEYTLVYEDYEGDKV 270

Query: 274 LVGDVPWQMFVSTAKRLRVLKTSELPALSIGCSKQQ 289
           LVGDVPW MFVS+ KRLRVLKTS+L +  I   +++
Sbjct: 271 LVGDVPWGMFVSSVKRLRVLKTSDLSSSLITSGRKR 295

[Close]

BLAST of Sed0002899 vs. ExPASy Swiss-Prot
Match: Q5W670 (Auxin-responsive protein IAA18 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA18 PE=2 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 3.8e-48
Identity = 131/325 (40.31%), Postives = 180/325 (55.38%), Query Frame = 0


Query: 8   EEDGDRPRLLNFIPNHRQW-LSAGDVAGKPQI---SDENK-LELKLGLPG---------- 67
           ++ G  P LL+ IP+ R+W +   D  G       +DE+K LELKLGLPG          
Sbjct: 6   KDKGLPPTLLHLIPDGREWKVKEADGEGSRNTNLDADEDKELELKLGLPGVQQEERAADS 65

Query: 68  -EADWSGEGKNDSVISFGGFPVSSN----------------FIGK----LHQPSKISPFC 127
            E     + ++ S  S G FP  S                  +G      +Q  + +  C
Sbjct: 66  REKIQQQQRESSSEPSIGCFPTHSKPTTSIGTTGAKRGFFAIVGATLEGYNQSHRDTEEC 125

Query: 128 SK---MGDLVNAEAKS--------FHSSVNANSSQKRAAPAPVVGWPPVRLSRRNLAS-T 187
            K   +GD   A  +           ++ ++++ Q R A  PVVGWPP+R  RRNL + +
Sbjct: 126 GKELTLGDENMAGERKKGCCPSPPCSAAAHSSNPQGRGAIPPVVGWPPIRSFRRNLTNGS 185

Query: 188 SFSKPMSETSDAAPSKL-PSLEEKPVKVGGKGLFVKINMDGVPIGRKIDLNAYDNYEKLS 247
           SF +     +D A  K  P  +++P+        VKINMDG+PIGRK+DL  YD+Y+KLS
Sbjct: 186 SFKQSPERQNDEADDKAKPICKKRPL--------VKINMDGIPIGRKVDLQIYDSYQKLS 245

Query: 248 TAVDELFRGLLAAQKDCSNGGILNKQEEDKLITGLLDGSGEYTLVYEDNEGDRVLVGDVP 284
           +AV+ELFRG L AQKD S      +  EDK+ +GLLDG+G YTLVYEDN+GDR+L GD+P
Sbjct: 246 SAVEELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTGVYTLVYEDNDGDRMLAGDIP 305

[Close]

BLAST of Sed0002899 vs. ExPASy Swiss-Prot
Match: Q9LG86 (Auxin-responsive protein IAA2 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA2 PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.1e-47
Identity = 106/178 (59.55%), Postives = 126/178 (70.79%), Query Frame = 0


Query: 107 SSVNANSSQKRAAPAPVVGWPPVRLSRRNLASTSFSKPMSETSDAAPSKLPSLEEKPVKV 166
           +  NA+     AA APVVGWPPVR  RRNLAS+S S   S+ +   PS  P   +K  K 
Sbjct: 55  NGTNASKPSGAAAAAPVVGWPPVRSFRRNLASSSSSS--SKQAPPPPSSSPQNGDKASKD 114

Query: 167 GG--KGLFVKINMDGVPIGRKIDLNAYDNYEKLSTAVDELFRGLLAAQKDCSNGGILNKQ 226
           GG  KG+FVKINMDGVPIGRK+DL AY  Y +LS AVD+LFRGLLAAQ   ++G      
Sbjct: 115 GGAEKGMFVKINMDGVPIGRKVDLAAYGGYAQLSAAVDKLFRGLLAAQSAAADG------ 174

Query: 227 EEDKLITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFVSTAKRLRVLKTSELPALSI 283
           E D    G + G GEYTLVYED+EGDR+LVGDVPWQMF++TAKRLRVLK+S+LP  S+
Sbjct: 175 EADAAAAGEMVGGGEYTLVYEDDEGDRMLVGDVPWQMFIATAKRLRVLKSSDLPPPSL 224

[Close]

BLAST of Sed0002899 vs. ExPASy TrEMBL
Match: A0A5A7U6P7 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00290 PE=3 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 9.1e-122
Identity = 234/327 (71.56%), Postives = 260/327 (79.51%), Query Frame = 0


Query: 1   MEMKGCSEEDGDRPRLLNFIPNHRQWLSAGDVAGKPQISDENKLELKLGLPGEADWSGEG 60
           MEM GCSE+D D P+LL+ IP  RQWL+ GDVAGK   SD+ KLEL+LGLPGE DWSG+G
Sbjct: 1   MEMNGCSEKDEDYPQLLDLIPKDRQWLTTGDVAGKTNTSDDKKLELRLGLPGEGDWSGKG 60

Query: 61  KNDSVISFGGFPV-------------SSNFIGKLHQPSKIS--------------PFCSK 120
           + DSV SFG FPV             S NF+GKL QP+KIS              P C+K
Sbjct: 61  RGDSVPSFGYFPVSRKFSPSENPWPPSPNFLGKL-QPTKISGFCLSAMGKEGVSQPCCTK 120

Query: 121 MGDLVNAEAKSFHSSVN---ANSSQKRAAPAPVVGWPPVRLSRRNLASTSFSKPMSETSD 180
           MGDL NAEAK F SSVN   +NSSQKR APAPVVGWPP+R SRRNLAS+SFSKP SE++D
Sbjct: 121 MGDLQNAEAKPFPSSVNIAVSNSSQKRTAPAPVVGWPPIRSSRRNLASSSFSKPASESAD 180

Query: 181 AAPSKLPSLEEKPVKVGGKGLFVKINMDGVPIGRKIDLNAYDNYEKLSTAVDELFRGLLA 240
           A+PSKLP   EKPV VGGKGLFVKINMDGVPIGRKIDLNAYD+YEKLS+ VDELFRGLLA
Sbjct: 181 ASPSKLPGPGEKPVDVGGKGLFVKINMDGVPIGRKIDLNAYDSYEKLSSGVDELFRGLLA 240

Query: 241 AQKDCSNGGILNKQEEDKLITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFVSTAKRLR 298
           AQ+D S GG+LNKQEE+K ITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFVST KRLR
Sbjct: 241 AQRDSSGGGVLNKQEEEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFVSTVKRLR 300

[Close]

BLAST of Sed0002899 vs. ExPASy TrEMBL
Match: A0A1S3BIC1 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103489974 PE=3 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 9.1e-122
Identity = 234/327 (71.56%), Postives = 260/327 (79.51%), Query Frame = 0


Query: 1   MEMKGCSEEDGDRPRLLNFIPNHRQWLSAGDVAGKPQISDENKLELKLGLPGEADWSGEG 60
           MEM GCSE+D D P+LL+ IP  RQWL+ GDVAGK   SD+ KLEL+LGLPGE DWSG+G
Sbjct: 1   MEMNGCSEKDEDYPQLLDLIPKDRQWLTTGDVAGKTNTSDDKKLELRLGLPGEGDWSGKG 60

Query: 61  KNDSVISFGGFPV-------------SSNFIGKLHQPSKIS--------------PFCSK 120
           + DSV SFG FPV             S NF+GKL QP+KIS              P C+K
Sbjct: 61  RGDSVPSFGYFPVSRKFSPSENPWPPSPNFLGKL-QPTKISGFCLSAMGKEGVSQPCCTK 120

Query: 121 MGDLVNAEAKSFHSSVN---ANSSQKRAAPAPVVGWPPVRLSRRNLASTSFSKPMSETSD 180
           MGDL NAEAK F SSVN   +NSSQKR APAPVVGWPP+R SRRNLAS+SFSKP SE++D
Sbjct: 121 MGDLQNAEAKPFPSSVNIAVSNSSQKRTAPAPVVGWPPIRSSRRNLASSSFSKPASESAD 180

Query: 181 AAPSKLPSLEEKPVKVGGKGLFVKINMDGVPIGRKIDLNAYDNYEKLSTAVDELFRGLLA 240
           A+PSKLP   EKPV VGGKGLFVKINMDGVPIGRKIDLNAYD+YEKLS+ VDELFRGLLA
Sbjct: 181 ASPSKLPGPGEKPVDVGGKGLFVKINMDGVPIGRKIDLNAYDSYEKLSSGVDELFRGLLA 240

Query: 241 AQKDCSNGGILNKQEEDKLITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFVSTAKRLR 298
           AQ+D S GG+LNKQEE+K ITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFVST KRLR
Sbjct: 241 AQRDSSGGGVLNKQEEEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFVSTVKRLR 300

[Close]

BLAST of Sed0002899 vs. ExPASy TrEMBL
Match: A0A0A0L8D0 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_3G444560 PE=3 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 3.5e-121
Identity = 234/327 (71.56%), Postives = 260/327 (79.51%), Query Frame = 0


Query: 1   MEMKGCSEEDGDRPRLLNFIPNHRQWLSAGDVAGKPQISDENKLELKLGLPGEADWSGEG 60
           M M GCSE+D D P+LL+ IP  RQWL+ GDVAGK   SD+ KLEL+LGLPGE DWSG+G
Sbjct: 1   MGMNGCSEKDEDYPQLLDLIPKDRQWLATGDVAGKANTSDDKKLELRLGLPGEGDWSGKG 60

Query: 61  KNDSVISFGGFPVS-------------SNFIGKLHQPSKIS--------------PFCSK 120
           ++DSV SFG FPVS              NF+GKL QP+KIS              P C+K
Sbjct: 61  RDDSVPSFGYFPVSRKFTPSENPWPPHPNFLGKL-QPTKISGFCLSAMGKEGVSQPCCTK 120

Query: 121 MGDLVNAEAKSFHSSVN---ANSSQKRAAPAPVVGWPPVRLSRRNLASTSFSKPMSETSD 180
           MGDL NAEAK F SSVN   +NSSQKR APAPVVGWPP+R SRRN+AS+SFSKP SE+SD
Sbjct: 121 MGDLHNAEAKPFPSSVNIAVSNSSQKRTAPAPVVGWPPIRSSRRNIASSSFSKPASESSD 180

Query: 181 AAPSKLPSLEEKPVKVGGKGLFVKINMDGVPIGRKIDLNAYDNYEKLSTAVDELFRGLLA 240
           A+PSKLP   EKPV VGGKGLFVKINMDGVPIGRKIDLNAYD+YEKLS  VDELFRGLLA
Sbjct: 181 ASPSKLPGPGEKPVDVGGKGLFVKINMDGVPIGRKIDLNAYDSYEKLSFGVDELFRGLLA 240

Query: 241 AQKDCSNGGILNKQEEDKLITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFVSTAKRLR 298
           AQ+D S GG+LNKQEE+K ITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFVSTAKRLR
Sbjct: 241 AQRDSSGGGVLNKQEEEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFVSTAKRLR 300

[Close]

BLAST of Sed0002899 vs. ExPASy TrEMBL
Match: A0A6J1DJP5 (Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111021103 PE=3 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 1.9e-119
Identity = 227/327 (69.42%), Postives = 262/327 (80.12%), Query Frame = 0


Query: 1   MEMKGCSEEDGDRPRLLNFIPNHRQWLSAGDVAGKPQISDENKLELKLGLPGEADWSGEG 60
           ME+ GCSE+D D PRLL+ IP  RQW++ GDV GK   SD+ KLEL+LGLPGEADW G+ 
Sbjct: 1   MEINGCSEKDEDCPRLLDLIPKDRQWVTTGDVVGKIHSSDDKKLELRLGLPGEADWCGKE 60

Query: 61  KNDSVISFGGFP------------VSSNFIGKLHQPSKIS---------------PFCSK 120
           +++S + FG FP             S+NF+GKL QP+K+S               P C+K
Sbjct: 61  RDESPLCFGYFPHPQKFSSTENPWPSANFLGKL-QPTKLSTFHLSAMAKETAGSQPCCTK 120

Query: 121 MGDLVNAEAKSFHSSVN---ANSSQKRAAPAPVVGWPPVRLSRRNLASTSFSKPMSETSD 180
           MGDL NAEAK F SS N   +NSSQKR APAPVVGWPP+R SRRNLAS+SFSKP SE+ D
Sbjct: 121 MGDLQNAEAKPFPSSANTAVSNSSQKRTAPAPVVGWPPIRSSRRNLASSSFSKPASESLD 180

Query: 181 AAPSKLPSLEEKPVKVGGKGLFVKINMDGVPIGRKIDLNAYDNYEKLSTAVDELFRGLLA 240
           AAPSKLP+  EKPV+VGGKGLFVKINMDGVPIGRKIDLNAYD+Y+KLS+AVDELFRGLLA
Sbjct: 181 AAPSKLPAPREKPVEVGGKGLFVKINMDGVPIGRKIDLNAYDSYDKLSSAVDELFRGLLA 240

Query: 241 AQKDCSNGGILNKQEEDKLITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFVSTAKRLR 298
           AQ+D S GG+LNKQEE+K ITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFVST KRLR
Sbjct: 241 AQRDSSGGGVLNKQEEEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFVSTVKRLR 300

[Close]

BLAST of Sed0002899 vs. ExPASy TrEMBL
Match: A0A6J1KCR4 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111492695 PE=3 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 5.2e-117
Identity = 223/307 (72.64%), Postives = 250/307 (81.43%), Query Frame = 0


Query: 1   MEMKGCSEEDGDRPRLLNFIPNHRQWLSAGDVAGKPQISDENKLELKLGLPGEADWSGEG 60
           MEM GCSE+D D P+LL+ IP HRQWLSA DVAGK Q SD+ KLEL+LGLPG+ADWS + 
Sbjct: 1   MEMNGCSEKDEDCPQLLDLIPKHRQWLSAVDVAGKTQSSDDKKLELRLGLPGDADWSRKE 60

Query: 61  KNDSVISFGGFPVSS-------------NFIGKLHQPSKISPFCSKMGDLVNAEAKSFHS 120
           +NDS++SFG FP SS             NF+GKL QP+K S FCSKMGDL NAEAKSF S
Sbjct: 61  RNDSLLSFGHFPTSSKFSPSENPWPSSANFLGKL-QPNKFSVFCSKMGDLQNAEAKSFPS 120

Query: 121 SVN---ANSSQKRAAPAPVVGWPPVRLSRRNLASTSFSKPMSETSDAAPSKLPSLEEKPV 180
           S N   +N+SQKR APAPVVGWPP+R SRRNL S+SF KP  E+SDAAPSKLP+  EK V
Sbjct: 121 SANTPVSNTSQKRTAPAPVVGWPPIRSSRRNLRSSSFEKPAVESSDAAPSKLPAPREKRV 180

Query: 181 KVGGKGLFVKINMDGVPIGRKIDLNAYDNYEKLSTAVDELFRGLLAAQKDCSNGGILNKQ 240
           + GGKGLFVKINMDGVPIGRKIDLNAYDNY+KLS AVDELFR LLAAQ+D S  G+L KQ
Sbjct: 181 EAGGKGLFVKINMDGVPIGRKIDLNAYDNYQKLSCAVDELFRALLAAQRDSSGSGVLKKQ 240

Query: 241 EEDKLITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFVSTAKRLRVLKTSELPALSIGC 292
           EE+K ITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMF+ST KRLRVLK+SELPALS+  
Sbjct: 241 EEEKPITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFISTVKRLRVLKSSELPALSVLG 300

[Close]

BLAST of Sed0002899 vs. TAIR 10
Match: AT3G16500.1 (phytochrome-associated protein 1 )

HSP 1 Score: 241.9 bits (616), Expect = 6.6e-64
Identity = 145/289 (50.17%), Postives = 186/289 (64.36%), Query Frame = 0


Query: 3   MKGCSEEDGDRPRLLNFIPNHRQWLSAGDVAGKPQISDENKLELKLGLPGEADWSGEGKN 62
           M+GC       P+LL+ IP  R+W        K     E KLEL+LG PG     G+ ++
Sbjct: 1   MEGCPRNREIGPKLLDLIPQGRKWYQ----EDKNNTDQEKKLELRLGPPG-----GDEED 60

Query: 63  DSVISFGGFPVSSNFIGKLHQPSKISPFCSKMGDLVNAEAKSFHSSVNANSSQKRAAPAP 122
            S I        +  I  + + ++   F    G+  +   K+  +SV  + SQKR AP P
Sbjct: 61  HSAIK-----KKNTEIRNIKKETEDKSFHCFNGNHFSPSNKT--TSV-PHISQKRTAPGP 120

Query: 123 VVGWPPVRLSRRNLASTSFSKPMSETSDAAPSKLPSLEEKPVKVGGKGLFVKINMDGVPI 182
           VVGWPPVR  R+NLASTS SK  +E+S           EK V+   +G+FVKINMDGVPI
Sbjct: 121 VVGWPPVRSFRKNLASTSSSKLGNESSHGGQINKSDDGEKQVETKKEGMFVKINMDGVPI 180

Query: 183 GRKIDLNAYDNYEKLSTAVDELFRGLLAAQKDCSNGGILNKQEEDKLITGLLDGSGEYTL 242
           GRK+DLNAY++YE+LS  VD+LFRGLLAAQ+D S+G     Q E+K I GLLDG GE+TL
Sbjct: 181 GRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDG-----QGEEKPIIGLLDGKGEFTL 240

Query: 243 VYEDNEGDRVLVGDVPWQMFVSTAKRLRVLKTSEL-PALSIGCSKQQKM 291
            YEDNEGD++LVGDVPWQMFVS+ KRLRV+K+SE+  AL+ GCSKQ+KM
Sbjct: 241 TYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSEISSALTFGCSKQEKM 267

[Close]

BLAST of Sed0002899 vs. TAIR 10
Match: AT1G51950.1 (indole-3-acetic acid inducible 18 )

HSP 1 Score: 211.1 bits (536), Expect = 1.2e-54
Identity = 141/298 (47.32%), Postives = 180/298 (60.40%), Query Frame = 0


Query: 3   MKGCSEEDGDRPRLLN-FIPNHRQ-WLSAGDVAGKPQISDENKLELKLGLPGEADWSGEG 62
           M+G S      P+LL+  IP  R+ W    D       ++E KLELKLG PGE D     
Sbjct: 1   MEGYSRNGEISPKLLDLMIPQERRNWFH--DEKNSVFKTEEKKLELKLGPPGEED----- 60

Query: 63  KNDSVISFGGFPVSSNFIGKLHQPSKISPFCSKMGDLVNAEAKSFHSSVNANSSQKRAAP 122
            ++S+I                +  K  P   K   +++   K F  S    +S KR AP
Sbjct: 61  DDESMI----------------RHMKKEP---KDKSILSLAGKYFSPSSTKTTSHKRTAP 120

Query: 123 APVVGWPPVRLSRRNLASTSFSK--PMSETSDAAPSKLPSLE-----EKPVKVGGKGLFV 182
            PVVGWPPVR  R+NLAS S SK    S TS+    K    +      +P + G  G+FV
Sbjct: 121 GPVVGWPPVRSFRKNLASGSSSKLGNDSTTSNGVTLKNQKCDAAAKTTEPKRQG--GMFV 180

Query: 183 KINMDGVPIGRKIDLNAYDNYEKLSTAVDELFRGLLAAQKDCSNGGILNKQEEDKLITGL 242
           KINM GVPIGRK+DL+A+++YE+LS  VD+LFRGLLAAQ+D       +  E++K ITGL
Sbjct: 181 KINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQRD-----FPSSIEDEKPITGL 240

Query: 243 LDGSGEYTLVYEDNEGDRVLVGDVPWQMFVSTAKRLRVLKTSEL-PALSIGCSKQQKM 291
           LDG+GEYTL YEDNEGD++LVGDVPWQMFVS+ KRLRV+KTSE+  AL+ G  KQ+KM
Sbjct: 241 LDGNGEYTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSEISSALTYGNGKQEKM 265

[Close]

BLAST of Sed0002899 vs. TAIR 10
Match: AT5G25890.1 (indole-3-acetic acid inducible 28 )

HSP 1 Score: 139.8 bits (351), Expect = 3.5e-33
Identity = 91/198 (45.96%), Postives = 114/198 (57.58%), Query Frame = 0


Query: 86  KISPFCSKMGDLVNAEAKSFHSSVNANS--SQKRAAPAPVVGWPPVRLSRRNLASTSFSK 145
           +++P C +     N       SS    S  S  R   APVVGWPPVR SRRNL +    +
Sbjct: 10  RLAPPCHQFTSNNNINGSKQKSSTKETSFLSNNRVEVAPVVGWPPVRSSRRNLTAQLKEE 69

Query: 146 PMSETSDAAPSKLPSLEEKPVKVGGKGLFVKINMDGVPIGRKIDLNAYDNYEKLSTAVDE 205
              + SD         EEK        L+VKINM+GVPIGRK++L+AY+NY++LS AVD+
Sbjct: 70  MKKKESD---------EEKE-------LYVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQ 129

Query: 206 LFRGLLAAQKDCSNGGILNKQEEDKLITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFV 265
           LF     ++KD  +   LN+Q               YTLVYED EGD+VLVGDVPW+MFV
Sbjct: 130 LF-----SKKDSWD---LNRQ---------------YTLVYEDTEGDKVLVGDVPWEMFV 168

Query: 266 STAKRLRVLKTSELPALS 282
           ST KRL VLKTS   +LS
Sbjct: 190 STVKRLHVLKTSHAFSLS 168

[Close]

BLAST of Sed0002899 vs. TAIR 10
Match: AT2G33310.2 (auxin-induced protein 13 )

HSP 1 Score: 129.0 bits (323), Expect = 6.2e-30
Identity = 78/180 (43.33%), Postives = 109/180 (60.56%), Query Frame = 0


Query: 107 SSVNANSSQKRAAPAPVVGWPPVRLSRRN-LASTSFSKPMSETSDAAPSKLPSLEEKPV- 166
           S+ +A SS  R++ + VVGWPP+   R N L +   +K   E  +A   K+   E K V 
Sbjct: 62  SASHAGSSPPRSS-SQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVT 121

Query: 167 -KVGGKGL--FVKINMDGVPIGRKIDLNAYDNYEKLSTAVDELFRGLLAAQKDCSNGGIL 226
            KV GK    F+K+NMDGV IGRK+DLNA+ +YE L+  ++++F          +N G +
Sbjct: 122 KKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFR--------TNPGTV 181

Query: 227 NKQEEDKLITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFVSTAKRLRVLKTSELPALS 282
               +      LLDGS E+ L YED EGD +LVGDVPW+MF+++ KRLRV+KTSE   L+
Sbjct: 182 GLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLA 232

[Close]

BLAST of Sed0002899 vs. TAIR 10
Match: AT2G33310.1 (auxin-induced protein 13 )

HSP 1 Score: 128.3 bits (321), Expect = 1.1e-29
Identity = 78/180 (43.33%), Postives = 108/180 (60.00%), Query Frame = 0


Query: 107 SSVNANSSQKRAAPAPVVGWPPVRLSRRN-LASTSFSKPMSETSDAAPSKLPSLEEKPV- 166
           S+ +A SS  R+  + VVGWPP+   R N L +   +K   E  +A   K+   E K V 
Sbjct: 62  SASHAGSSPPRS--SQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVT 121

Query: 167 -KVGGKGL--FVKINMDGVPIGRKIDLNAYDNYEKLSTAVDELFRGLLAAQKDCSNGGIL 226
            KV GK    F+K+NMDGV IGRK+DLNA+ +YE L+  ++++F          +N G +
Sbjct: 122 KKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFR--------TNPGTV 181

Query: 227 NKQEEDKLITGLLDGSGEYTLVYEDNEGDRVLVGDVPWQMFVSTAKRLRVLKTSELPALS 282
               +      LLDGS E+ L YED EGD +LVGDVPW+MF+++ KRLRV+KTSE   L+
Sbjct: 182 GLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLA 231

The following BLAST results are available for this feature:

BLAST of Sed0002899 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878199.1	3.4e-123	74.12	auxin-responsive protein IAA26-like [Benincasa hispida]	[more]
XP_008447559.1	1.9e-121	71.56	PREDICTED: auxin-responsive protein IAA26-like [Cucumis melo] >KAA0050850.1 auxi...	[more]
XP_004150768.1	7.2e-121	71.56	auxin-responsive protein IAA26 isoform X2 [Cucumis sativus] >KGN58028.1 hypothet...	[more]
XP_022153649.1	3.9e-119	69.42	auxin-responsive protein IAA26-like [Momordica charantia]	[more]
XP_031738916.1	1.1e-118	69.85	auxin-responsive protein IAA26 isoform X1 [Cucumis sativus]	[more]

BLAST of Sed0002899 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LAL2	9.2e-63	50.17	Auxin-responsive protein IAA26 OS=Arabidopsis thaliana OX=3702 GN=IAA26 PE=1 SV=...	[more]
O24408	1.7e-53	47.32	Auxin-responsive protein IAA18 OS=Arabidopsis thaliana OX=3702 GN=IAA18 PE=1 SV=...	[more]
Q6H543	9.0e-50	46.01	Auxin-responsive protein IAA7 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA7 P...	[more]
Q5W670	3.8e-48	40.31	Auxin-responsive protein IAA18 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA18...	[more]
Q9LG86	1.1e-47	59.55	Auxin-responsive protein IAA2 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA2 P...	[more]

BLAST of Sed0002899 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U6P7	9.1e-122	71.56	Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3BIC1	9.1e-122	71.56	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103489974 PE=3 SV=1	[more]
A0A0A0L8D0	3.5e-121	71.56	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_3G444560 PE=3 SV=1	[more]
A0A6J1DJP5	1.9e-119	69.42	Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111021103 PE=3 SV=...	[more]
A0A6J1KCR4	5.2e-117	72.64	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111492695 PE=3 SV=1	[more]

BLAST of Sed0002899 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16500.1	6.6e-64	50.17	phytochrome-associated protein 1	[more]
AT1G51950.1	1.2e-54	47.32	indole-3-acetic acid inducible 18	[more]
AT5G25890.1	3.5e-33	45.96	indole-3-acetic acid inducible 28	[more]
AT2G33310.2	6.2e-30	43.33	auxin-induced protein 13	[more]
AT2G33310.1	1.1e-29	43.33	auxin-induced protein 13	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 166..286 e-value: 1.4E-37 score: 129.8
None	No IPR available	PANTHER	PTHR31734:SF2	AUXIN-RESPONSIVE PROTEIN IAA26	coord: 13..288
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 169..271
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 44..280 e-value: 4.4E-62 score: 210.1
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 13..288
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 170..279 score: 24.227852

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002899.1	Sed0002899.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding