Sed0002884 (gene) Chayote v1

Overview


Name	Sed0002884
Type	gene
Organism	Sechium edule (Chayote v1)
Description	HTH myb-type domain-containing protein
Location	LG02: 45622012 .. 45623257 (-)
RNA-Seq Expression	Sed0002884
Synteny	Sed0002884

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTACAAGATCCACCTCGAACCCCTCTCCCAAATTCCTCACCTTTCTTCTTCTTCTTCTTCATCTTCTTCATCATCTCCCCTTTTCTGTGCTCTCAGATTCTTTCACTTCTTGTTTGTTTTCAAAATTGGGGCAAACCCAGTAAGATTCTTGCCCAAATCTGAAGTGGGTTTGTGTTAGATTTCACAAACAATGAAAGAAGATGACTCCAATTGGTTCTCAAAATGGGAGCATCAACTCCCTTCTCTCCATGAATTAATGCCCCTTTCCCAAACCCTAATCACCCCTGATCTTGCTTTGGCATTTGACATCAACAACAACAACAACAACCACCCAGCACCACCGCCGCACCCGCCGGTGCCACCCGCCGCCGATTTCGGGGACTCCGGCGAGTTCGGGTCCGGCGCCGGCGACGAACCCGCCAGGACCCTGAAACGCCCGAGGCTGGTCTGGACTCCACAGCTCCACAAGCGATTTGTAGACGCCGTTGCGCATTTGGGCATAAAAAACGCGGTCCCTAAGACCATAATGCAATTGATGAGCGTTGACGGGTTGACCCGTGAAAACGTGGCCAGCCATTTGCAGAAATACCGCCTCTATTTGAAGCGCATGCAGGGGATTTCCGGCGGCGGAGCTAGCGGTGGCGGCGGCGGCGCTGGATTGGGTTCTGCCGTTTCAGATCCCGCCACCGACCATTTGTTCGCTAGCTCCCCTGTTCCGCCGCATTTTCTTCACTCTGCTCGGACTAATTCCGGCCATTTCCTGCCCGTTTTCCCTGTCGGAGCTCTGCAGAACAACCACCACCAGATTGCTTCCTCCGCCGCTCAGTACCACCACCGGCAAGTGGCCCATTTTGGGTCGCCGCCGAATGGGCAGTTTGAGCATCCGTTTTTGGCTCGTCCTGTTCTTCGAATTGGGGCTCCGGCGAATACTCCGGCGACGAATTTCGGCGAGGATTTAGGTTCCAGTAATGGAACAGAAGAGAGGAAGATTCTCACTCTTTTTCCCACGGGAAAAGATTGAATTTCTATATCTCCGGCGGCAATGGCGTCTTTTAATTCTTTATCTCGTCTCTTCCGGCGAAAACAGGGGCCGCCGTCAGTTGCAGAGTCGCCGGTAGAATTGTTGGAGGAAGGTAGAATGGAATCTATCATGGGAGGGGTAAAATTGTACATTCCCATTTAAAATATTTATATAAGACTTTGTGAAGGCATCCATTGAAATCCTTAGAATGAGTTCCAGGATT

mRNA sequence

CTTTACAAGATCCACCTCGAACCCCTCTCCCAAATTCCTCACCTTTCTTCTTCTTCTTCTTCATCTTCTTCATCATCTCCCCTTTTCTGTGCTCTCAGATTCTTTCACTTCTTGTTTGTTTTCAAAATTGGGGCAAACCCAGTAAGATTCTTGCCCAAATCTGAAGTGGGTTTGTGTTAGATTTCACAAACAATGAAAGAAGATGACTCCAATTGGTTCTCAAAATGGGAGCATCAACTCCCTTCTCTCCATGAATTAATGCCCCTTTCCCAAACCCTAATCACCCCTGATCTTGCTTTGGCATTTGACATCAACAACAACAACAACAACCACCCAGCACCACCGCCGCACCCGCCGGTGCCACCCGCCGCCGATTTCGGGGACTCCGGCGAGTTCGGGTCCGGCGCCGGCGACGAACCCGCCAGGACCCTGAAACGCCCGAGGCTGGTCTGGACTCCACAGCTCCACAAGCGATTTGTAGACGCCGTTGCGCATTTGGGCATAAAAAACGCGGTCCCTAAGACCATAATGCAATTGATGAGCGTTGACGGGTTGACCCGTGAAAACGTGGCCAGCCATTTGCAGAAATACCGCCTCTATTTGAAGCGCATGCAGGGGATTTCCGGCGGCGGAGCTAGCGGTGGCGGCGGCGGCGCTGGATTGGGTTCTGCCGTTTCAGATCCCGCCACCGACCATTTGTTCGCTAGCTCCCCTGTTCCGCCGCATTTTCTTCACTCTGCTCGGACTAATTCCGGCCATTTCCTGCCCGTTTTCCCTGTCGGAGCTCTGCAGAACAACCACCACCAGATTGCTTCCTCCGCCGCTCAGTACCACCACCGGCAAGTGGCCCATTTTGGGTCGCCGCCGAATGGGCAGTTTGAGCATCCGTTTTTGGCTCGTCCTGTTCTTCGAATTGGGGCTCCGGCGAATACTCCGGCGACGAATTTCGGCGAGGATTTAGGTTCCAGTAATGGAACAGAAGAGAGGAAGATTCTCACTCTTTTTCCCACGGGAAAAGATTGAATTTCTATATCTCCGGCGGCAATGGCGTCTTTTAATTCTTTATCTCGTCTCTTCCGGCGAAAACAGGGGCCGCCGTCAGTTGCAGAGTCGCCGGTAGAATTGTTGGAGGAAGGTAGAATGGAATCTATCATGGGAGGGGTAAAATTGTACATTCCCATTTAAAATATTTATATAAGACTTTGTGAAGGCATCCATTGAAATCCTTAGAATGAGTTCCAGGATT

Coding sequence (CDS)

ATGAAAGAAGATGACTCCAATTGGTTCTCAAAATGGGAGCATCAACTCCCTTCTCTCCATGAATTAATGCCCCTTTCCCAAACCCTAATCACCCCTGATCTTGCTTTGGCATTTGACATCAACAACAACAACAACAACCACCCAGCACCACCGCCGCACCCGCCGGTGCCACCCGCCGCCGATTTCGGGGACTCCGGCGAGTTCGGGTCCGGCGCCGGCGACGAACCCGCCAGGACCCTGAAACGCCCGAGGCTGGTCTGGACTCCACAGCTCCACAAGCGATTTGTAGACGCCGTTGCGCATTTGGGCATAAAAAACGCGGTCCCTAAGACCATAATGCAATTGATGAGCGTTGACGGGTTGACCCGTGAAAACGTGGCCAGCCATTTGCAGAAATACCGCCTCTATTTGAAGCGCATGCAGGGGATTTCCGGCGGCGGAGCTAGCGGTGGCGGCGGCGGCGCTGGATTGGGTTCTGCCGTTTCAGATCCCGCCACCGACCATTTGTTCGCTAGCTCCCCTGTTCCGCCGCATTTTCTTCACTCTGCTCGGACTAATTCCGGCCATTTCCTGCCCGTTTTCCCTGTCGGAGCTCTGCAGAACAACCACCACCAGATTGCTTCCTCCGCCGCTCAGTACCACCACCGGCAAGTGGCCCATTTTGGGTCGCCGCCGAATGGGCAGTTTGAGCATCCGTTTTTGGCTCGTCCTGTTCTTCGAATTGGGGCTCCGGCGAATACTCCGGCGACGAATTTCGGCGAGGATTTAGGTTCCAGTAATGGAACAGAAGAGAGGAAGATTCTCACTCTTTTTCCCACGGGAAAAGATTGA

Protein sequence

MKEDDSNWFSKWEHQLPSLHELMPLSQTLITPDLALAFDINNNNNNHPAPPPHPPVPPAADFGDSGEFGSGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGGASGGGGGAGLGSAVSDPATDHLFASSPVPPHFLHSARTNSGHFLPVFPVGALQNNHHQIASSAAQYHHRQVAHFGSPPNGQFEHPFLARPVLRIGAPANTPATNFGEDLGSSNGTEERKILTLFPTGKD

Homology

[Close]

BLAST of Sed0002884 vs. NCBI nr
Match: XP_022958435.1 (transcription factor MYBC1-like [Cucurbita moschata])

HSP 1 Score: 450.3 bits (1157), Expect = 1.2e-122
Identity = 230/286 (80.42%), Postives = 244/286 (85.31%), Query Frame = 0


Query: 1   MKEDDSNWFSKWEHQLPSLHELMPLSQTLITPDLALAFDINN-----NNNNHPAPPPHPP 60
           M+EDDSNWFSKW+ +LPS  ELMPLSQTLITPDLALAFDI N     NNNNH  PPP PP
Sbjct: 1   MREDDSNWFSKWDQELPSPDELMPLSQTLITPDLALAFDIRNPDSSINNNNHHPPPPPPP 60

Query: 61  V---PPAADFGDSGEF--GSGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPK 120
           V   P +ADFGDSG+F  G+GAGDEPARTLKRPRLVWTPQLHKRFVDAV HLGIKNAVPK
Sbjct: 61  VPIQPSSADFGDSGDFVSGAGAGDEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPK 120

Query: 121 TIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGGASGGGGGAGLGSAVSDPATDHLF 180
           TIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGG   G  GGAGL S VSDPATDHLF
Sbjct: 121 TIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGVSGGAGLVSPVSDPATDHLF 180

Query: 181 ASSPVPPHFLHSARTNSGHFLPVFPVGALQNNHHQIASSAAQYHHRQVAHFGSPPNGQFE 240
           ASSPVPPHFLHS+R NS HFLP  PVGALQ +HHQ+A++AA  +HRQVAHFGSPPNGQFE
Sbjct: 181 ASSPVPPHFLHSSRANSDHFLPFVPVGALQ-HHHQMAAAAAAQYHRQVAHFGSPPNGQFE 240

Query: 241 HPFLARPVLRIGAPANTPATNFGEDLGSSNGTEERKILTLFPTGKD 277
           HPFLARPV RIG P  TPATN+ EDL SSNGT  RK+LTLFPTG D
Sbjct: 241 HPFLARPVHRIGTPVTTPATNYSEDLDSSNGTGGRKVLTLFPTGND 285

[Close]

BLAST of Sed0002884 vs. NCBI nr
Match: XP_022971205.1 (transcription factor MYBC1-like [Cucurbita maxima])

HSP 1 Score: 449.9 bits (1156), Expect = 1.6e-122
Identity = 230/289 (79.58%), Postives = 245/289 (84.78%), Query Frame = 0


Query: 1   MKEDDSNWFSKWEHQLPSLHELMPLSQTLITPDLALAFDI--------NNNNNNHPAPPP 60
           M+EDDSNWFSKW+ +LPS  ELMPLSQTLITPDLALAFDI        NNNNNNH  PPP
Sbjct: 1   MREDDSNWFSKWDQELPSPDELMPLSQTLITPDLALAFDIRNPDSSINNNNNNNHHPPPP 60

Query: 61  HPPV---PPAADFGDSGEF--GSGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNA 120
            PPV   P +ADFGDSG+F  G+GAG+EPARTLKRPRLVWTPQLHKRFVDAV HLGIKNA
Sbjct: 61  PPPVPIQPSSADFGDSGDFVSGAGAGEEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNA 120

Query: 121 VPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGGASGGGGGAGLGSAVSDPATD 180
           VPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGI GG   G  GGAGL S VSDPATD
Sbjct: 121 VPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGIPGGSGGGVSGGAGLVSPVSDPATD 180

Query: 181 HLFASSPVPPHFLHSARTNSGHFLPVFPVGALQNNHHQIASSAAQYHHRQVAHFGSPPNG 240
           HLFASSPVPPHFLHS+RTNS HFLP  PVGALQ +HHQ+A++AA  +HRQVAHFGSPPNG
Sbjct: 181 HLFASSPVPPHFLHSSRTNSDHFLPFVPVGALQ-HHHQMAAAAAAQYHRQVAHFGSPPNG 240

Query: 241 QFEHPFLARPVLRIGAPANTPATNFGEDLGSSNGTEERKILTLFPTGKD 277
           QFEHPFLARPV RIG P  TPATN+ EDL SSNGT  RK+LTLFPTG D
Sbjct: 241 QFEHPFLARPVHRIGTPVTTPATNYSEDLDSSNGTGGRKVLTLFPTGND 288

[Close]

BLAST of Sed0002884 vs. NCBI nr
Match: XP_038904980.1 (transcription factor MYBC1-like [Benincasa hispida])

HSP 1 Score: 448.7 bits (1153), Expect = 3.5e-122
Identity = 229/285 (80.35%), Postives = 241/285 (84.56%), Query Frame = 0


Query: 1   MKEDDSNWFSKWEHQLPSLHELMPLSQTLITPDLALAFDINN-----NNNNHPAPPPHPP 60
           MKEDDSNWFSKWE +LPS  ELMPLSQTLITPDLALAFDI N     NNN+HP PPP PP
Sbjct: 1   MKEDDSNWFSKWESELPSPEELMPLSQTLITPDLALAFDITNSNPPINNNSHPPPPPPPP 60

Query: 61  ----VPPAADFGDSGEFGSGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKT 120
                P +ADFGDSG+  SGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKT
Sbjct: 61  PVLTQPSSADFGDSGDLASGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKT 120

Query: 121 IMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGGASGGGGGAGLGSAVSDPATDHLFA 180
           IMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGG   G  GGAGL SA SDPATDHLFA
Sbjct: 121 IMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGTSGGAGLPSAASDPATDHLFA 180

Query: 181 SSPVPPHFLHSARTNSGHFLPVFPVGALQNNHHQIASSAAQYHHRQVAHFGSPPNGQFEH 240
           SSPVP HFLHSAR NS HFLP  PVGALQ++HHQ+A++AAQY HRQVA FGSPPNGQ EH
Sbjct: 181 SSPVPAHFLHSARGNSDHFLPFVPVGALQHHHHQMAAAAAQY-HRQVAQFGSPPNGQLEH 240

Query: 241 PFLARPVLRIGAPANTPATNFGEDLGSSNGTEERKILTLFPTGKD 277
           PFL R V RIGAP +TPATN+ EDL S NGT  RK+LTLFPTG D
Sbjct: 241 PFLTRSVHRIGAPVSTPATNYSEDLDSGNGTGGRKVLTLFPTGND 284

[Close]

BLAST of Sed0002884 vs. NCBI nr
Match: KAG6596177.1 (Transcription factor MYBC1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 446.4 bits (1147), Expect = 1.8e-121
Identity = 230/288 (79.86%), Postives = 244/288 (84.72%), Query Frame = 0


Query: 1   MKEDDSNWFSKWEHQLPSLHELMPLSQTLITPDLALAFD-------INNNNNNHPAPPPH 60
           M+EDDSNWFSK + +LPS  ELMPLSQTLITPDLALAFD       INNNNNNH  PPP 
Sbjct: 1   MREDDSNWFSKRDQELPSPDELMPLSQTLITPDLALAFDIRNPDSSINNNNNNHHPPPPP 60

Query: 61  PPV---PPAADFGDSGEF--GSGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAV 120
           PPV   P +ADFGDSG+F  G+GAGDEPARTLKRPRLVWTPQLHKRFVDAV HLGIKNAV
Sbjct: 61  PPVPIQPSSADFGDSGDFVSGAGAGDEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAV 120

Query: 121 PKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGGASGGGGGAGLGSAVSDPATDH 180
           PKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGG   G  GGAGL S VSDPATDH
Sbjct: 121 PKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGVSGGAGLVSPVSDPATDH 180

Query: 181 LFASSPVPPHFLHSARTNSGHFLPVFPVGALQNNHHQIASSAAQYHHRQVAHFGSPPNGQ 240
           LFASSPVPPHFLHS+R NS HFLP  PVGALQ +HHQ+A++AA  +HRQVAHFGSPPNGQ
Sbjct: 181 LFASSPVPPHFLHSSRANSDHFLPFVPVGALQ-HHHQMAAAAAAQYHRQVAHFGSPPNGQ 240

Query: 241 FEHPFLARPVLRIGAPANTPATNFGEDLGSSNGTEERKILTLFPTGKD 277
           FEHPFLARPV RIG P  TPATN+ EDL SSNGT  RK+LTLFPTG D
Sbjct: 241 FEHPFLARPVHRIGTPVTTPATNYSEDLDSSNGTGGRKVLTLFPTGND 287

[Close]

BLAST of Sed0002884 vs. NCBI nr
Match: XP_023540127.1 (transcription factor MYBC1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 446.0 bits (1146), Expect = 2.3e-121
Identity = 228/289 (78.89%), Postives = 244/289 (84.43%), Query Frame = 0


Query: 1   MKEDDSNWFSKWEHQLPSLHELMPLSQTLITPDLALAFDI--------NNNNNNHPAPPP 60
           M+EDDSNWFSKW+ +LPS  ELMPLSQTLITPDLALAFDI        NNNNN+H  PPP
Sbjct: 1   MREDDSNWFSKWDQELPSPDELMPLSQTLITPDLALAFDIRNPDSSINNNNNNHHHPPPP 60

Query: 61  HPPV---PPAADFGDSGEF--GSGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNA 120
            PPV   P +ADFGDSG++  G+G GDEPARTLKRPRLVWTPQLHKRFVDAV HLGIKNA
Sbjct: 61  PPPVPIQPSSADFGDSGDYVSGAGDGDEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNA 120

Query: 121 VPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGGASGGGGGAGLGSAVSDPATD 180
           VPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGG   G  GGAGL S VSDPATD
Sbjct: 121 VPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGVSGGAGLVSPVSDPATD 180

Query: 181 HLFASSPVPPHFLHSARTNSGHFLPVFPVGALQNNHHQIASSAAQYHHRQVAHFGSPPNG 240
           HLFASSPVPPHFLHS+R NS HFLP  PVGALQ +HHQ+A++AA  +HRQVAHFGSPPNG
Sbjct: 181 HLFASSPVPPHFLHSSRANSDHFLPFVPVGALQ-HHHQMAAAAAAQYHRQVAHFGSPPNG 240

Query: 241 QFEHPFLARPVLRIGAPANTPATNFGEDLGSSNGTEERKILTLFPTGKD 277
           QFEHPFLARPV RIG P  TPATN+ EDL SSNGT  RK+LTLFPTG D
Sbjct: 241 QFEHPFLARPVHRIGTPVTTPATNYSEDLDSSNGTGGRKVLTLFPTGND 288

[Close]

BLAST of Sed0002884 vs. ExPASy Swiss-Prot
Match: O22210 (Transcription factor MYBC1 OS=Arabidopsis thaliana OX=3702 GN=MYBC1 PE=1 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 6.4e-58
Identity = 128/204 (62.75%), Postives = 145/204 (71.08%), Query Frame = 0


Query: 1   MKEDDSNWFSKWEHQLPSLHELMPLSQTLITPDLALAFDINNNNNN-------------- 60
           M+ED+ NWF +WE +LPS  EL+P+SQTLITP LALAF I + N++              
Sbjct: 1   MREDNPNWFLRWEEELPSPEELIPISQTLITPHLALAFQIGSPNHHLGSKRTTAIYHQKL 60

Query: 61  -------HPAPPPHPPVPPAADF--GDSGEFGSGA-GDEPARTLKRPRLVWTPQLHKRFV 120
                   P P P PP+   +DF  GDS + GSG+ G EPARTLKRPRLVWTPQLHKRFV
Sbjct: 61  QSSTTPTTPTPTP-PPMMMNSDFGGGDSTDLGSGSIGGEPARTLKRPRLVWTPQLHKRFV 120

Query: 121 DAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGGASGGGGGAG 180
           DAV HLGIKNAVPKTIMQLMSV+GLTRENVASHLQKYRLYL+RMQG +G G +GG     
Sbjct: 121 DAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYRLYLRRMQGGNGNGITGG----- 180

[Close]

BLAST of Sed0002884 vs. ExPASy Swiss-Prot
Match: Q9SNB4 (Transcription factor LUX OS=Arabidopsis thaliana OX=3702 GN=LUX PE=1 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.3e-38
Identity = 124/321 (38.63%), Postives = 155/321 (48.29%), Query Frame = 0


Query: 5   DSNWFSKWEHQLPSLHELMPLSQTLITPDLALAFDI------------------------ 64
           D +  S+WE  LPS  +L  LS +LI P+LA+AF I                        
Sbjct: 15  DGDRVSEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQDVNRASETTLSSLRG 74

Query: 65  -------NNNNNNHPAPPPHPPVPPAADF---------GDSG------------EFGSGA 124
                  +++NNN           P +D          GD G            E  SG 
Sbjct: 75  GSSGPNTSSSNNNVEEEDRVGSSSPGSDSKKQKTSNGDGDDGGGVDPDSAMAAEEGDSGT 134

Query: 125 GDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQK 184
            D   +TLKRPRLVWTPQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQK
Sbjct: 135 EDLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQK 194

Query: 185 YRLYLKRMQGISGGGASGGGGGAGLGSAVSDPATDHLFASSPVPPHFLHSARTNSGHF-- 244
           YRLYLKRMQG++  G S               A+D LF+S+PVPP          G    
Sbjct: 195 YRLYLKRMQGLTNEGPS---------------ASDKLFSSTPVPPQSFQDIGGGGGSSGN 254

Query: 245 --LPV-----------FPVGA----LQNNHHQIASSAAQYHHRQVAHFGSPPNGQFE-HP 254
             +P+            PV A    +Q  HHQ   +   YH     H G+  NG FE +P
Sbjct: 255 VGVPIPGAYGTQQMMQMPVYAHHMGMQGYHHQ-NHNHDPYHQNHRHHHGAGGNGAFESNP 314

[Close]

BLAST of Sed0002884 vs. ExPASy Swiss-Prot
Match: Q94DH3 (Transcription factor PCL1 OS=Oryza sativa subsp. japonica OX=39947 GN=PCL1 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.8e-34
Identity = 97/231 (41.99%), Postives = 122/231 (52.81%), Query Frame = 0


Query: 11  KWEHQLPSLHELMPLSQTLITPDLALAFDI--------------------------NNNN 70
           +WE  LP   EL PLSQ L+   LA AF I                          ++++
Sbjct: 21  EWETGLPGADELTPLSQPLVPAGLAAAFRIPPEPGRTLLDVHRASAATVSRLRRASSSSS 80

Query: 71  NNHPAPPPHPPVPPAADFGDSGEFGSGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGI 130
           ++ PA         A +    G    G G+    + KR RLVWTPQLHKRFV+ VAHLG+
Sbjct: 81  SSFPAFASKGAGTGADEAESGGGADGGNGNTNNSSSKRARLVWTPQLHKRFVEVVAHLGM 140

Query: 131 KNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGGASGGGGGAGLGSAVSDP 190
           KNAVPKTIMQLM+V+GLTRENVASHLQKYRLY+KRMQG+S  G S               
Sbjct: 141 KNAVPKTIMQLMNVEGLTRENVASHLQKYRLYVKRMQGLSNEGPS--------------- 200

Query: 191 ATDHLFASSPVPPHFLHSARTNSGHFLPVFPVGALQNNHHQIASSAAQYHH 216
            +DH+FAS+PVP   LH    +  H  P         N+   A++ + YHH
Sbjct: 201 PSDHIFASTPVPHASLHDQVPSPYHPHPHHH----SYNNAAYAATVSSYHH 232

[Close]

BLAST of Sed0002884 vs. ExPASy Swiss-Prot
Match: Q9LTH4 (Transcription factor BOA OS=Arabidopsis thaliana OX=3702 GN=BOA PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.4e-33
Identity = 101/260 (38.85%), Postives = 130/260 (50.00%), Query Frame = 0


Query: 11  KWEHQLPSLHELMPLSQTLITPDLALAF-----------DINNNNN-------------- 70
           +WE  LP+  +L PLSQ L+   LALAF           D+N  +               
Sbjct: 28  EWEIGLPNGDDLTPLSQYLVPSILALAFSMIPERSRTIHDVNRASQITLSSLRSSTNASS 87

Query: 71  ---------NHPAPPPHPPVPPAADFGDSG--------EFGSGAGDEPARTLKRPRLVWT 130
                        P   P     +D G++         E  SG  D   +T KRPRLVWT
Sbjct: 88  VMEEVVDRVESSVPGSDPKKQKKSDGGEAAAVEDSTAEEGDSGPEDASGKTSKRPRLVWT 147

Query: 131 PQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGGA 190
           PQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQKYRLYLKR+QG+     
Sbjct: 148 PQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRIQGL----- 207

Query: 191 SGGGGGAGLGSAVSDP--ATDHLFASSPVPPHFLHSARTNSGHFLPVFPVGALQNNHHQI 227
                     +   DP  ++D LF+S+PVPP        ++G      PV ++       
Sbjct: 208 ----------TTEEDPYSSSDQLFSSTPVPPQSFQDGGGSNGKLGVPVPVPSMVPIPGYG 267

[Close]

BLAST of Sed0002884 vs. ExPASy Swiss-Prot
Match: Q940D0 (Two-component response regulator ARR1 OS=Arabidopsis thaliana OX=3702 GN=ARR1 PE=1 SV=2)

HSP 1 Score: 102.1 bits (253), Expect = 1.1e-20
Identity = 47/81 (58.02%), Postives = 63/81 (77.78%), Query Frame = 0


Query: 64  DSGEFGSGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTR 123
           + GE      DE A  LK+PR+VW+ +LH++FV AV  LG++ AVPK I++LM+V GLTR
Sbjct: 219 EEGEEQGDDKDEDASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKKILELMNVPGLTR 278

Query: 124 ENVASHLQKYRLYLKRMQGIS 145
           ENVASHLQKYR+YL+R+ G+S
Sbjct: 279 ENVASHLQKYRIYLRRLGGVS 299

[Close]

BLAST of Sed0002884 vs. ExPASy TrEMBL
Match: A0A6J1H3F6 (transcription factor MYBC1-like OS=Cucurbita moschata OX=3662 GN=LOC111459631 PE=4 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 5.9e-123
Identity = 230/286 (80.42%), Postives = 244/286 (85.31%), Query Frame = 0


Query: 1   MKEDDSNWFSKWEHQLPSLHELMPLSQTLITPDLALAFDINN-----NNNNHPAPPPHPP 60
           M+EDDSNWFSKW+ +LPS  ELMPLSQTLITPDLALAFDI N     NNNNH  PPP PP
Sbjct: 1   MREDDSNWFSKWDQELPSPDELMPLSQTLITPDLALAFDIRNPDSSINNNNHHPPPPPPP 60

Query: 61  V---PPAADFGDSGEF--GSGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPK 120
           V   P +ADFGDSG+F  G+GAGDEPARTLKRPRLVWTPQLHKRFVDAV HLGIKNAVPK
Sbjct: 61  VPIQPSSADFGDSGDFVSGAGAGDEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPK 120

Query: 121 TIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGGASGGGGGAGLGSAVSDPATDHLF 180
           TIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGG   G  GGAGL S VSDPATDHLF
Sbjct: 121 TIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGVSGGAGLVSPVSDPATDHLF 180

Query: 181 ASSPVPPHFLHSARTNSGHFLPVFPVGALQNNHHQIASSAAQYHHRQVAHFGSPPNGQFE 240
           ASSPVPPHFLHS+R NS HFLP  PVGALQ +HHQ+A++AA  +HRQVAHFGSPPNGQFE
Sbjct: 181 ASSPVPPHFLHSSRANSDHFLPFVPVGALQ-HHHQMAAAAAAQYHRQVAHFGSPPNGQFE 240

Query: 241 HPFLARPVLRIGAPANTPATNFGEDLGSSNGTEERKILTLFPTGKD 277
           HPFLARPV RIG P  TPATN+ EDL SSNGT  RK+LTLFPTG D
Sbjct: 241 HPFLARPVHRIGTPVTTPATNYSEDLDSSNGTGGRKVLTLFPTGND 285

[Close]

BLAST of Sed0002884 vs. ExPASy TrEMBL
Match: A0A6J1I541 (transcription factor MYBC1-like OS=Cucurbita maxima OX=3661 GN=LOC111469997 PE=4 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 7.7e-123
Identity = 230/289 (79.58%), Postives = 245/289 (84.78%), Query Frame = 0


Query: 1   MKEDDSNWFSKWEHQLPSLHELMPLSQTLITPDLALAFDI--------NNNNNNHPAPPP 60
           M+EDDSNWFSKW+ +LPS  ELMPLSQTLITPDLALAFDI        NNNNNNH  PPP
Sbjct: 1   MREDDSNWFSKWDQELPSPDELMPLSQTLITPDLALAFDIRNPDSSINNNNNNNHHPPPP 60

Query: 61  HPPV---PPAADFGDSGEF--GSGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNA 120
            PPV   P +ADFGDSG+F  G+GAG+EPARTLKRPRLVWTPQLHKRFVDAV HLGIKNA
Sbjct: 61  PPPVPIQPSSADFGDSGDFVSGAGAGEEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNA 120

Query: 121 VPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGGASGGGGGAGLGSAVSDPATD 180
           VPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGI GG   G  GGAGL S VSDPATD
Sbjct: 121 VPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGIPGGSGGGVSGGAGLVSPVSDPATD 180

Query: 181 HLFASSPVPPHFLHSARTNSGHFLPVFPVGALQNNHHQIASSAAQYHHRQVAHFGSPPNG 240
           HLFASSPVPPHFLHS+RTNS HFLP  PVGALQ +HHQ+A++AA  +HRQVAHFGSPPNG
Sbjct: 181 HLFASSPVPPHFLHSSRTNSDHFLPFVPVGALQ-HHHQMAAAAAAQYHRQVAHFGSPPNG 240

Query: 241 QFEHPFLARPVLRIGAPANTPATNFGEDLGSSNGTEERKILTLFPTGKD 277
           QFEHPFLARPV RIG P  TPATN+ EDL SSNGT  RK+LTLFPTG D
Sbjct: 241 QFEHPFLARPVHRIGTPVTTPATNYSEDLDSSNGTGGRKVLTLFPTGND 288

[Close]

BLAST of Sed0002884 vs. ExPASy TrEMBL
Match: A0A0A0LC84 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G817730 PE=4 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 3.0e-119
Identity = 225/286 (78.67%), Postives = 242/286 (84.62%), Query Frame = 0


Query: 1   MKEDDSNWFSKWEHQLPSLHELMPLSQTLITPDLALAFDINNN---NNNHPAPPPHPP-- 60
           MKEDDSNWFSKWE +LPS  ELMPLSQTLITPDLALAFDI N+   N++HP PPP PP  
Sbjct: 1   MKEDDSNWFSKWEQELPSPDELMPLSQTLITPDLALAFDITNSNPPNDSHPPPPPPPPPV 60

Query: 61  --VPPAADFGDSGEFGSGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIM 120
              P +ADF DSG+ GSGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIM
Sbjct: 61  LIQPTSADFADSGDLGSGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIM 120

Query: 121 QLMSVDGLTRENVASHLQKYRLYLKRMQGISGGGASGGGGGAGLGSAVSDPATDHLFASS 180
           QLMSVDGLTRENVASHLQKYRLYLKRMQGISGG   G  GGAGL S  SDPATDHLFASS
Sbjct: 121 QLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGANGGAGLVSTASDPATDHLFASS 180

Query: 181 PVPPHFLHSARTNSGHFLPVFPVGALQNNHHQI-ASSAAQYHHRQVAHFGS--PPNGQFE 240
           PVPPHFLHSAR NS HFLP  PVGALQ++HHQ+ A++AA  +HRQVAHFGS  P NGQFE
Sbjct: 181 PVPPHFLHSARGNSDHFLPFVPVGALQHHHHQMAAAAAAAQYHRQVAHFGSSPPTNGQFE 240

Query: 241 HPFLARPVLRIGAPANTPATNFGEDLGSSNGTEERKILTLFPTGKD 277
           + FLARPV R+GAPA+TP TN+ EDL S NGT  RK+LTLFPTG D
Sbjct: 241 NTFLARPVHRVGAPASTPVTNYSEDLDSGNGTGGRKVLTLFPTGND 286

[Close]

BLAST of Sed0002884 vs. ExPASy TrEMBL
Match: A0A5A7UK93 (Transcription factor PCL1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006440 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 1.1e-118
Identity = 224/286 (78.32%), Postives = 241/286 (84.27%), Query Frame = 0


Query: 1   MKEDDSNWFSKWEHQLPSLHELMPLSQTLITPDLALAFDINNN---NNNHPAPPPHPP-- 60
           MKEDDSNWFSKWE +LPS  ELMPLSQTLITPDLALAFDI N+   N++HP PPP PP  
Sbjct: 1   MKEDDSNWFSKWEQELPSPDELMPLSQTLITPDLALAFDITNSNPLNDSHPPPPPPPPPV 60

Query: 61  --VPPAADFGDSGEFGSGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIM 120
              P +ADF DSG+ GSGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIM
Sbjct: 61  IIQPSSADFADSGDLGSGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIM 120

Query: 121 QLMSVDGLTRENVASHLQKYRLYLKRMQGISGGGASGGGGGAGLGSAVSDPATDHLFASS 180
           QLMSVDGLTRENVASHLQKYRLYLKRMQGISGG   G  GGAGL S  SDPATDHLFASS
Sbjct: 121 QLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGANGGAGLVSPASDPATDHLFASS 180

Query: 181 PVPPHFLHSARTNSGHFLPVFPVGALQNNHHQI-ASSAAQYHHRQVAHFGS--PPNGQFE 240
           PVPPHFLHSAR NS HFLP  PVGALQ++HHQ+ A++AA  +HRQVAHFGS  P NGQFE
Sbjct: 181 PVPPHFLHSARGNSDHFLPFVPVGALQHHHHQMAAAAAAAQYHRQVAHFGSSPPTNGQFE 240

Query: 241 HPFLARPVLRIGAPANTPATNFGEDLGSSNGTEERKILTLFPTGKD 277
           + FLARPV R+GAP +TP TN+ EDL S NGT  RK+LTLFPTG D
Sbjct: 241 NTFLARPVHRVGAPVSTPVTNYSEDLDSGNGTGGRKVLTLFPTGND 286

[Close]

BLAST of Sed0002884 vs. ExPASy TrEMBL
Match: A0A1S3B723 (transcription factor PCL1-like OS=Cucumis melo OX=3656 GN=LOC103486866 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 1.1e-118
Identity = 224/286 (78.32%), Postives = 241/286 (84.27%), Query Frame = 0


Query: 1   MKEDDSNWFSKWEHQLPSLHELMPLSQTLITPDLALAFDINNN---NNNHPAPPPHPP-- 60
           MKEDDSNWFSKWE +LPS  ELMPLSQTLITPDLALAFDI N+   N++HP PPP PP  
Sbjct: 1   MKEDDSNWFSKWEQELPSPDELMPLSQTLITPDLALAFDITNSNPLNDSHPPPPPPPPPV 60

Query: 61  --VPPAADFGDSGEFGSGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIM 120
              P +ADF DSG+ GSGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIM
Sbjct: 61  IIQPSSADFADSGDLGSGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIM 120

Query: 121 QLMSVDGLTRENVASHLQKYRLYLKRMQGISGGGASGGGGGAGLGSAVSDPATDHLFASS 180
           QLMSVDGLTRENVASHLQKYRLYLKRMQGISGG   G  GGAGL S  SDPATDHLFASS
Sbjct: 121 QLMSVDGLTRENVASHLQKYRLYLKRMQGISGGSGGGANGGAGLVSPASDPATDHLFASS 180

Query: 181 PVPPHFLHSARTNSGHFLPVFPVGALQNNHHQI-ASSAAQYHHRQVAHFGS--PPNGQFE 240
           PVPPHFLHSAR NS HFLP  PVGALQ++HHQ+ A++AA  +HRQVAHFGS  P NGQFE
Sbjct: 181 PVPPHFLHSARGNSDHFLPFVPVGALQHHHHQMAAAAAAAQYHRQVAHFGSSPPTNGQFE 240

Query: 241 HPFLARPVLRIGAPANTPATNFGEDLGSSNGTEERKILTLFPTGKD 277
           + FLARPV R+GAP +TP TN+ EDL S NGT  RK+LTLFPTG D
Sbjct: 241 NTFLARPVHRVGAPVSTPVTNYSEDLDSGNGTGGRKVLTLFPTGND 286

[Close]

BLAST of Sed0002884 vs. TAIR 10
Match: AT3G10760.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 295.8 bits (756), Expect = 3.6e-80
Identity = 183/346 (52.89%), Postives = 213/346 (61.56%), Query Frame = 0


Query: 1   MKEDDSNWFSKWEHQLPSLHELMPLSQTLITPDLALAFDI-----NNNNNNHPAPPPH-- 60
           M+EDDS+WF++WE +LPS  ELMP+SQ+LI+PDLALAFDI      N N+N P    H  
Sbjct: 1   MREDDSDWFARWEEELPSPEELMPISQSLISPDLALAFDIRTPNHGNGNSNQPHHHHHHQ 60

Query: 61  --PPVP-----------PAADF-GDSGEFGSG--AGDEPARTLKRPRLVWTPQLHKRFVD 120
             PP P            +A+F  DS + GSG  AGDEPARTLKRPRLVWTPQLHKRFVD
Sbjct: 61  TTPPTPSQLQLPSSQANSSAEFAADSADLGSGGAAGDEPARTLKRPRLVWTPQLHKRFVD 120

Query: 121 AVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGGASGGGGGAGL 180
           AVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQG+S GG +G       
Sbjct: 121 AVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGAG------- 180

Query: 181 GSAVSDPATDHLFASSPVPPHFLHSART-NSGHFLPVF-PVGALQNNHHQIASSAA---- 240
               SDPATD LFASSPVP HFLH  R  +S HF+P F P+  LQ      A++AA    
Sbjct: 181 ----SDPATDRLFASSPVPAHFLHPNRVPSSDHFMPSFVPIATLQQQQQMAAAAAAAAAA 240

Query: 241 ------QYHHRQV--AHFGSPPNGQFEHP--------------------------FLA-- 277
                    HRQ+  AHFGSP NG F  P                          FLA  
Sbjct: 241 NPHLQPPQFHRQIAAAHFGSPTNGGFSSPTSNGQFGSPTSNGFGSPTTNGKFDPSFLAVR 300

[Close]

BLAST of Sed0002884 vs. TAIR 10
Match: AT5G05090.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 275.4 bits (703), Expect = 5.0e-74
Identity = 163/291 (56.01%), Postives = 196/291 (67.35%), Query Frame = 0


Query: 1   MKEDDSNWFSKWEHQLPSLHELMPLSQTLITPDLALAFDINNNNNNH---PAPPPHPPVP 60
           M+E+DSNWF+KWE +LPS  EL+PLSQ+LITPDLA+AFD++ NNN++   P P   PP P
Sbjct: 1   MREEDSNWFAKWEEELPSPEELIPLSQSLITPDLAIAFDLHRNNNSNSGQPLPQTTPPQP 60

Query: 61  PAADFGDSGEF-GSGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLM 120
                  S E  G   GDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLM
Sbjct: 61  -----NSSAEIAGDSTGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLM 120

Query: 121 SVDGLTRENVASHLQKYRLYLKRMQGISGGGASGGGGGAGLGSAVSDPATDHLFASSPVP 180
           SVDGLTRENVASHLQKYRLYLKRM+      + GGGGG+G         +DHLFASSPVP
Sbjct: 121 SVDGLTRENVASHLQKYRLYLKRMK------SGGGGGGSG--------DSDHLFASSPVP 180

Query: 181 PHFLH-SARTNSGHFLPVFPVGALQNNHHQIASSAAQYHHRQVA--HFGSPPNGQFEHPF 240
           PHFLH ++R +S  F+P F   + Q  H  IA+  +Q+ HRQ++  +F SP     +  F
Sbjct: 181 PHFLHPTSRQSSDLFIPSFVPISTQQQH--IAAPPSQFLHRQISAVNFTSPTKATDQAMF 240

Query: 241 LARPVLRIGAPANTPAT--------NFGEDLGSSNGTEERKILTLFPTGKD 277
           LAR    +  P   P++        N+ +DL S   T    +LTLFPT  D
Sbjct: 241 LARQQSELQQPVFKPSSLHLHSQVANYTQDLKSGAKT----VLTLFPTRDD 266

[Close]

BLAST of Sed0002884 vs. TAIR 10
Match: AT2G40970.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 225.7 bits (574), Expect = 4.5e-59
Identity = 128/204 (62.75%), Postives = 145/204 (71.08%), Query Frame = 0


Query: 1   MKEDDSNWFSKWEHQLPSLHELMPLSQTLITPDLALAFDINNNNNN-------------- 60
           M+ED+ NWF +WE +LPS  EL+P+SQTLITP LALAF I + N++              
Sbjct: 1   MREDNPNWFLRWEEELPSPEELIPISQTLITPHLALAFQIGSPNHHLGSKRTTAIYHQKL 60

Query: 61  -------HPAPPPHPPVPPAADF--GDSGEFGSGA-GDEPARTLKRPRLVWTPQLHKRFV 120
                   P P P PP+   +DF  GDS + GSG+ G EPARTLKRPRLVWTPQLHKRFV
Sbjct: 61  QSSTTPTTPTPTP-PPMMMNSDFGGGDSTDLGSGSIGGEPARTLKRPRLVWTPQLHKRFV 120

Query: 121 DAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISGGGASGGGGGAG 180
           DAV HLGIKNAVPKTIMQLMSV+GLTRENVASHLQKYRLYL+RMQG +G G +GG     
Sbjct: 121 DAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYRLYLRRMQGGNGNGITGG----- 180

[Close]

BLAST of Sed0002884 vs. TAIR 10
Match: AT3G46640.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 160.2 bits (404), Expect = 2.3e-39
Identity = 124/321 (38.63%), Postives = 155/321 (48.29%), Query Frame = 0


Query: 5   DSNWFSKWEHQLPSLHELMPLSQTLITPDLALAFDI------------------------ 64
           D +  S+WE  LPS  +L  LS +LI P+LA+AF I                        
Sbjct: 15  DGDRVSEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQDVNRASETTLSSLRG 74

Query: 65  -------NNNNNNHPAPPPHPPVPPAADF---------GDSG------------EFGSGA 124
                  +++NNN           P +D          GD G            E  SG 
Sbjct: 75  GSSGPNTSSSNNNVEEEDRVGSSSPGSDSKKQKTSNGDGDDGGGVDPDSAMAAEEGDSGT 134

Query: 125 GDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQK 184
            D   +TLKRPRLVWTPQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQK
Sbjct: 135 EDLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQK 194

Query: 185 YRLYLKRMQGISGGGASGGGGGAGLGSAVSDPATDHLFASSPVPPHFLHSARTNSGHF-- 244
           YRLYLKRMQG++  G S               A+D LF+S+PVPP          G    
Sbjct: 195 YRLYLKRMQGLTNEGPS---------------ASDKLFSSTPVPPQSFQDIGGGGGSSGN 254

Query: 245 --LPV-----------FPVGA----LQNNHHQIASSAAQYHHRQVAHFGSPPNGQFE-HP 254
             +P+            PV A    +Q  HHQ   +   YH     H G+  NG FE +P
Sbjct: 255 VGVPIPGAYGTQQMMQMPVYAHHMGMQGYHHQ-NHNHDPYHQNHRHHHGAGGNGAFESNP 314

[Close]

BLAST of Sed0002884 vs. TAIR 10
Match: AT3G46640.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 160.2 bits (404), Expect = 2.3e-39
Identity = 124/321 (38.63%), Postives = 155/321 (48.29%), Query Frame = 0


Query: 5   DSNWFSKWEHQLPSLHELMPLSQTLITPDLALAFDI------------------------ 64
           D +  S+WE  LPS  +L  LS +LI P+LA+AF I                        
Sbjct: 15  DGDRVSEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQDVNRASETTLSSLRG 74

Query: 65  -------NNNNNNHPAPPPHPPVPPAADF---------GDSG------------EFGSGA 124
                  +++NNN           P +D          GD G            E  SG 
Sbjct: 75  GSSGPNTSSSNNNVEEEDRVGSSSPGSDSKKQKTSNGDGDDGGGVDPDSAMAAEEGDSGT 134

Query: 125 GDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQK 184
            D   +TLKRPRLVWTPQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQK
Sbjct: 135 EDLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQK 194

Query: 185 YRLYLKRMQGISGGGASGGGGGAGLGSAVSDPATDHLFASSPVPPHFLHSARTNSGHF-- 244
           YRLYLKRMQG++  G S               A+D LF+S+PVPP          G    
Sbjct: 195 YRLYLKRMQGLTNEGPS---------------ASDKLFSSTPVPPQSFQDIGGGGGSSGN 254

Query: 245 --LPV-----------FPVGA----LQNNHHQIASSAAQYHHRQVAHFGSPPNGQFE-HP 254
             +P+            PV A    +Q  HHQ   +   YH     H G+  NG FE +P
Sbjct: 255 VGVPIPGAYGTQQMMQMPVYAHHMGMQGYHHQ-NHNHDPYHQNHRHHHGAGGNGAFESNP 314

The following BLAST results are available for this feature:

BLAST of Sed0002884 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958435.1	1.2e-122	80.42	transcription factor MYBC1-like [Cucurbita moschata]	[more]
XP_022971205.1	1.6e-122	79.58	transcription factor MYBC1-like [Cucurbita maxima]	[more]
XP_038904980.1	3.5e-122	80.35	transcription factor MYBC1-like [Benincasa hispida]	[more]
KAG6596177.1	1.8e-121	79.86	Transcription factor MYBC1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023540127.1	2.3e-121	78.89	transcription factor MYBC1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0002884 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22210	6.4e-58	62.75	Transcription factor MYBC1 OS=Arabidopsis thaliana OX=3702 GN=MYBC1 PE=1 SV=1	[more]
Q9SNB4	3.3e-38	38.63	Transcription factor LUX OS=Arabidopsis thaliana OX=3702 GN=LUX PE=1 SV=1	[more]
Q94DH3	3.8e-34	41.99	Transcription factor PCL1 OS=Oryza sativa subsp. japonica OX=39947 GN=PCL1 PE=2 ...	[more]
Q9LTH4	1.4e-33	38.85	Transcription factor BOA OS=Arabidopsis thaliana OX=3702 GN=BOA PE=2 SV=1	[more]
Q940D0	1.1e-20	58.02	Two-component response regulator ARR1 OS=Arabidopsis thaliana OX=3702 GN=ARR1 PE...	[more]

BLAST of Sed0002884 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H3F6	5.9e-123	80.42	transcription factor MYBC1-like OS=Cucurbita moschata OX=3662 GN=LOC111459631 PE...	[more]
A0A6J1I541	7.7e-123	79.58	transcription factor MYBC1-like OS=Cucurbita maxima OX=3661 GN=LOC111469997 PE=4...	[more]
A0A0A0LC84	3.0e-119	78.67	HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G81773...	[more]
A0A5A7UK93	1.1e-118	78.32	Transcription factor PCL1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3B723	1.1e-118	78.32	transcription factor PCL1-like OS=Cucumis melo OX=3656 GN=LOC103486866 PE=4 SV=1	[more]

BLAST of Sed0002884 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10760.1	3.6e-80	52.89	Homeodomain-like superfamily protein	[more]
AT5G05090.1	5.0e-74	56.01	Homeodomain-like superfamily protein	[more]
AT2G40970.1	4.5e-59	62.75	Homeodomain-like superfamily protein	[more]
AT3G46640.1	2.3e-39	38.63	Homeodomain-like superfamily protein	[more]
AT3G46640.2	2.3e-39	38.63	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 86..134 e-value: 1.9E-8 score: 34.4
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 87..138 score: 11.409622
None	No IPR available	GENE3D	1.10.10.60		coord: 79..141 e-value: 6.8E-32 score: 111.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 252..276
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 252..266
None	No IPR available	PANTHER	PTHR31442:SF31	HOMEODOMAIN-LIKE PROTEIN-RELATED	coord: 1..276
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 83..135 e-value: 2.8E-24 score: 83.2
IPR044841	Transcription factor LUX/BOA-like	PANTHER	PTHR31442	HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 1..276
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 79..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002884.1	Sed0002884.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity