Sed0002881 (gene) Chayote v1

Overview


Name	Sed0002881
Type	gene
Organism	Sechium edule (Chayote v1)
Description	glutaredoxin-C6
Location	LG13: 23669020 .. 23669888 (-)
RNA-Seq Expression	Sed0002881
Synteny	Sed0002881

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCCCGCTTCCACTCCTCTTCCCGTTGACAAAATTCCCAAATCAAAAACTTTGATTAAATCTCACCGGCGATGCAAGGCCTCCGCCGCTGCTCCGACGACCTCCTCCACCTGGACCTATCTCCGGCGCCGTCCGCCGCCTCCCTCTCCCTCGACGCGGCGGAGTCCGGCGAGACCAAAATCCGGCGGCTGATCTCCGAGCACCCCGTCATCATCTTCAGCCGGAATTCTTGCTACATGTGCCACGTCATGAAGAAGCTCCTGGCCACCATCGGGGTCCACCCCACCGTCATCGAACTCGACGACGACGGCGAGATCGAGGCCTTGGCCTCGTTCTCCGCCGCCGCCGCCCCCGCCGTGTTCATCGGCGGCAACTTCCTCGGCGGCCTCGAATCTCTTGTCGCCCTCCACCTCAGCGGCCACCTCGTACCTAAACTTGTCGAAGTCGGCGCTCTTTGGGTATGACCCTTCTCTAATTCTCTCACTTATTATCCCTTCTCCTTAATTACTATTATTATTATTATTATTATTATTATTATTAACCTTTCTATTTCATCATTGTAATTTTATGGAAAAGAAATCATCTTTGGTTGGAATTATGCAATCCCCCATGTAATTCAAAGATGAGATTTTTAGTGGAATGGGATGACAAACCAAAAAAAAAAAAATAATAATGGGTCAATCTTTTTGGTATTTTGTATTGTTGGGTCTTTCATTTTTTGCTTTAATTTGTTTATCTATTATATATATTCAAAATATGTCTGGTTTCTCTTATACTCAATCCCTCTATGTTATTTATCAAAGAGAAATTCTATAATTAGTTATTTTGTGTTGGGAGTGTCTCCTTCCCTCCTTAAAAGGTGTTGCCACA

mRNA sequence

TCCCCGCTTCCACTCCTCTTCCCGTTGACAAAATTCCCAAATCAAAAACTTTGATTAAATCTCACCGGCGATGCAAGGCCTCCGCCGCTGCTCCGACGACCTCCTCCACCTGGACCTATCTCCGGCGCCGTCCGCCGCCTCCCTCTCCCTCGACGCGGCGGAGTCCGGCGAGACCAAAATCCGGCGGCTGATCTCCGAGCACCCCGTCATCATCTTCAGCCGGAATTCTTGCTACATGTGCCACGTCATGAAGAAGCTCCTGGCCACCATCGGGGTCCACCCCACCGTCATCGAACTCGACGACGACGGCGAGATCGAGGCCTTGGCCTCGTTCTCCGCCGCCGCCGCCCCCGCCGTGTTCATCGGCGGCAACTTCCTCGGCGGCCTCGAATCTCTTGTCGCCCTCCACCTCAGCGGCCACCTCGTACCTAAACTTGTCGAAGTCGGCGCTCTTTGGGTATGACCCTTCTCTAATTCTCTCACTTATTATCCCTTCTCCTTAATTACTATTATTATTATTATTATTATTATTATTATTAACCTTTCTATTTCATCATTGTAATTTTATGGAAAAGAAATCATCTTTGGTTGGAATTATGCAATCCCCCATGTAATTCAAAGATGAGATTTTTAGTGGAATGGGATGACAAACCAAAAAAAAAAAAATAATAATGGGTCAATCTTTTTGGTATTTTGTATTGTTGGGTCTTTCATTTTTTGCTTTAATTTGTTTATCTATTATATATATTCAAAATATGTCTGGTTTCTCTTATACTCAATCCCTCTATGTTATTTATCAAAGAGAAATTCTATAATTAGTTATTTTGTGTTGGGAGTGTCTCCTTCCCTCCTTAAAAGGTGTTGCCACA

Coding sequence (CDS)

ATGCAAGGCCTCCGCCGCTGCTCCGACGACCTCCTCCACCTGGACCTATCTCCGGCGCCGTCCGCCGCCTCCCTCTCCCTCGACGCGGCGGAGTCCGGCGAGACCAAAATCCGGCGGCTGATCTCCGAGCACCCCGTCATCATCTTCAGCCGGAATTCTTGCTACATGTGCCACGTCATGAAGAAGCTCCTGGCCACCATCGGGGTCCACCCCACCGTCATCGAACTCGACGACGACGGCGAGATCGAGGCCTTGGCCTCGTTCTCCGCCGCCGCCGCCCCCGCCGTGTTCATCGGCGGCAACTTCCTCGGCGGCCTCGAATCTCTTGTCGCCCTCCACCTCAGCGGCCACCTCGTACCTAAACTTGTCGAAGTCGGCGCTCTTTGGGTATGA

Protein sequence

MQGLRRCSDDLLHLDLSPAPSAASLSLDAAESGETKIRRLISEHPVIIFSRNSCYMCHVMKKLLATIGVHPTVIELDDDGEIEALASFSAAAAPAVFIGGNFLGGLESLVALHLSGHLVPKLVEVGALWV

Homology

[Close]

BLAST of Sed0002881 vs. NCBI nr
Match: XP_004141321.1 (glutaredoxin-C6 [Cucumis sativus] >XP_008452734.1 PREDICTED: glutaredoxin-C6 [Cucumis melo] >KAA0064504.1 glutaredoxin-C6-like [Cucumis melo var. makuwa] >KGN55341.1 hypothetical protein Csa_012840 [Cucumis sativus] >TYK20086.1 glutaredoxin-C6-like [Cucumis melo var. makuwa])

HSP 1 Score: 209.9 bits (533), Expect = 1.3e-50
Identity = 113/136 (83.09%), Postives = 119/136 (87.50%), Query Frame = 0


Query: 1   MQGLRRCSDDLLHLDLSP----APSAASLSLDAAESGETKIRRLISEHPVIIFSRNSCYM 60
           MQGLRRCS+DLLHLDLSP     PS ASLS+D AES +T+IRRLISEHPVIIFSR SC M
Sbjct: 1   MQGLRRCSNDLLHLDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCM 60

Query: 61  CHVMKKLLATIGVHPTVIELDDDGEIEALASFSA--AAAPAVFIGGNFLGGLESLVALHL 120
           CHVMKKLLATIGVHPTVIEL+DD EI ALASFS+   A PAVFIGG FLGGLESLVALHL
Sbjct: 61  CHVMKKLLATIGVHPTVIELEDD-EIHALASFSSTTTATPAVFIGGAFLGGLESLVALHL 120

Query: 121 SGHLVPKLVEVGALWV 131
           SGHLVPKLVEVGALWV
Sbjct: 121 SGHLVPKLVEVGALWV 135

[Close]

BLAST of Sed0002881 vs. NCBI nr
Match: XP_038899998.1 (glutaredoxin-C6-like [Benincasa hispida])

HSP 1 Score: 208.8 bits (530), Expect = 2.9e-50
Identity = 113/138 (81.88%), Postives = 120/138 (86.96%), Query Frame = 0


Query: 1   MQGLRRCSDDLLHLDLSP----APSAASLSLDAAESGETKIRRLISEHPVIIFSRNSCYM 60
           MQGLRRCS+DLLHLDLSP     PS ASLS+D AES ET+IRRLISEHPVIIFSR SC M
Sbjct: 1   MQGLRRCSNDLLHLDLSPPPPTTPSPASLSIDVAESAETRIRRLISEHPVIIFSRTSCCM 60

Query: 61  CHVMKKLLATIGVHPTVIELDDDGEIEALASFSA----AAAPAVFIGGNFLGGLESLVAL 120
           CHVMKKLLATIGVHPTVIELDDD EI+AL+S S+    AA PAVFIGG F+GGLESLVAL
Sbjct: 61  CHVMKKLLATIGVHPTVIELDDD-EIDALSSCSSTTVPAATPAVFIGGAFVGGLESLVAL 120

Query: 121 HLSGHLVPKLVEVGALWV 131
           HLSGHLVPKLVEVGALWV
Sbjct: 121 HLSGHLVPKLVEVGALWV 137

[Close]

BLAST of Sed0002881 vs. NCBI nr
Match: KAG6608371.1 (Glutaredoxin-C6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 207.2 bits (526), Expect = 8.4e-50
Identity = 112/136 (82.35%), Postives = 121/136 (88.97%), Query Frame = 0


Query: 1   MQGLRRCSDDLLHLDLSP---APSAASLSLDAAESGETKIRRLISEHPVIIFSRNSCYMC 60
           MQGLRRCS+DLL LDLSP    PS ASLS+D AES ET+IRRLISEHPVIIFSR SC MC
Sbjct: 1   MQGLRRCSNDLLLLDLSPPSSVPSTASLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC 60

Query: 61  HVMKKLLATIGVHPTVIELDDDGEIEALASFSA---AAAPAVFIGGNFLGGLESLVALHL 120
           HVMKKLLA+IGVHPTVIELDD  EI+ALASFS+   AAAPAVFIGG+++GGLESLVALHL
Sbjct: 61  HVMKKLLASIGVHPTVIELDDH-EIDALASFSSTTPAAAPAVFIGGSYVGGLESLVALHL 120

Query: 121 SGHLVPKLVEVGALWV 131
           SGHLVPKLVEVGALWV
Sbjct: 121 SGHLVPKLVEVGALWV 135

[Close]

BLAST of Sed0002881 vs. NCBI nr
Match: XP_022982422.1 (glutaredoxin-C6 [Cucurbita maxima])

HSP 1 Score: 206.5 bits (524), Expect = 1.4e-49
Identity = 112/136 (82.35%), Postives = 121/136 (88.97%), Query Frame = 0


Query: 1   MQGLRRCSDDLLHLDLSP---APSAASLSLDAAESGETKIRRLISEHPVIIFSRNSCYMC 60
           MQGLRRCS+DLL LDLSP    PS ASLS+D AES ET+IRRLISEHPVIIFSR SC MC
Sbjct: 1   MQGLRRCSNDLLLLDLSPPSSVPSTASLSIDDAESAETRIRRLISEHPVIIFSRTSCCMC 60

Query: 61  HVMKKLLATIGVHPTVIELDDDGEIEALASFSA---AAAPAVFIGGNFLGGLESLVALHL 120
           HVMKKLLA+IGVHPTVIELDD  EI+ALASFS+   AAAPAVFIGG+++GGLESLVALHL
Sbjct: 61  HVMKKLLASIGVHPTVIELDDH-EIDALASFSSTTPAAAPAVFIGGSYVGGLESLVALHL 120

Query: 121 SGHLVPKLVEVGALWV 131
           SGHLVPKLVEVGALWV
Sbjct: 121 SGHLVPKLVEVGALWV 135

[Close]

BLAST of Sed0002881 vs. NCBI nr
Match: XP_022941086.1 (glutaredoxin-C6-like [Cucurbita moschata])

HSP 1 Score: 206.1 bits (523), Expect = 1.9e-49
Identity = 111/136 (81.62%), Postives = 121/136 (88.97%), Query Frame = 0


Query: 1   MQGLRRCSDDLLHLDLSP---APSAASLSLDAAESGETKIRRLISEHPVIIFSRNSCYMC 60
           MQGLRRCS+DLL LDLSP    PS ASLS+D AES ET+IRRLISEHPVIIFSR SC MC
Sbjct: 1   MQGLRRCSNDLLLLDLSPPSSVPSTASLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC 60

Query: 61  HVMKKLLATIGVHPTVIELDDDGEIEALASFSA---AAAPAVFIGGNFLGGLESLVALHL 120
           HVMKKLLA+IGVHPTVIELDD  EI+ALASFS+   AAAPAVF+GG+++GGLESLVALHL
Sbjct: 61  HVMKKLLASIGVHPTVIELDDH-EIDALASFSSTTPAAAPAVFMGGSYVGGLESLVALHL 120

Query: 121 SGHLVPKLVEVGALWV 131
           SGHLVPKLVEVGALWV
Sbjct: 121 SGHLVPKLVEVGALWV 135

[Close]

BLAST of Sed0002881 vs. ExPASy Swiss-Prot
Match: Q8L9S3 (Glutaredoxin-C6 OS=Arabidopsis thaliana OX=3702 GN=GRXC6 PE=2 SV=2)

HSP 1 Score: 156.0 bits (393), Expect = 2.9e-37
Identity = 90/140 (64.29%), Postives = 106/140 (75.71%), Query Frame = 0


Query: 3   GLRRCSDDLLHLDLSP--APSAASLSLDAAESGETKIRRLISEHPVIIFSRNSCYMCHVM 62
           GL+R S+D++ LDL+P    S+ SLS+D  ES E KIRRLISEHPVIIFSR+SC MCHVM
Sbjct: 6   GLQRFSNDVVRLDLTPPSQTSSTSLSIDEEESTEAKIRRLISEHPVIIFSRSSCCMCHVM 65

Query: 63  KKLLATIGVHPTVIELDDDGEIEALAS-----FSAAAA-----PAVFIGGNFLGGLESLV 122
           K+LLATIGV PTVIELDD  E+ +L +     +S   +     PAVFIG   +GGLESLV
Sbjct: 66  KRLLATIGVIPTVIELDDH-EVSSLPTALQDEYSGGVSVVGPPPAVFIGRECVGGLESLV 125

Query: 123 ALHLSGHLVPKLVEVGALWV 131
           ALHLSG LVPKLV+VGALWV
Sbjct: 126 ALHLSGQLVPKLVQVGALWV 144

[Close]

BLAST of Sed0002881 vs. ExPASy Swiss-Prot
Match: Q29PZ1 (Glutaredoxin-C10 OS=Arabidopsis thaliana OX=3702 GN=GRXC10 PE=2 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 3.8e-37
Identity = 90/148 (60.81%), Postives = 106/148 (71.62%), Query Frame = 0


Query: 1   MQGLRRCSDDLLHLDLS-----------PAPS-------AASLSLDAAESGETKIRRLIS 60
           M+GLR CS+D + LDL+           PAPS       + SLS D  E+ E+KI RLIS
Sbjct: 4   MRGLRNCSNDAVTLDLTVHPPPPPPLPPPAPSTVSSSTASTSLSFDEEETSESKIGRLIS 63

Query: 61  EHPVIIFSR-NSCYMCHVMKKLLATIGVHPTVIELDDDGEIEALASFSAAAAPAVFIGGN 120
           EHPVIIF+R +SC MCHVMKKLL+T+GVHPTVIE+ DDGEI  LA     AAP +FIGG 
Sbjct: 64  EHPVIIFTRFSSCCMCHVMKKLLSTVGVHPTVIEI-DDGEIAYLA---VEAAPVLFIGGT 123

Query: 121 FLGGLESLVALHLSGHLVPKLVEVGALW 130
            +GG ESLVALHLSG L+P+LVEVGALW
Sbjct: 124 CVGGFESLVALHLSGQLIPRLVEVGALW 147

[Close]

BLAST of Sed0002881 vs. ExPASy Swiss-Prot
Match: Q0DK35 (Glutaredoxin-C7 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC7 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.2e-24
Identity = 55/98 (56.12%), Postives = 72/98 (73.47%), Query Frame = 0


Query: 31  ESGETKIRRLISEHPVIIFSRNSCYMCHVMKKLLATIGVHPTVIELDDDGEIEALASFSA 90
           E    +I RL+ E PV+IF+R  C MCHVM++LLA +G H TVIELD+  E  A ++ +A
Sbjct: 39  EQPAERIGRLVRESPVVIFARRGCCMCHVMRRLLAAVGAHATVIELDEAAEEAAASAAAA 98

Query: 91  AAAPAVFIGGNFLGGLESLVALHLSGHLVPKLVEVGAL 129
           AA PA+F+GG  +GGL+ L+ LHLSG LVP+L EVGAL
Sbjct: 99  AAVPALFVGGAPVGGLDGLMGLHLSGRLVPRLREVGAL 136

[Close]

BLAST of Sed0002881 vs. ExPASy Swiss-Prot
Match: Q5SMY5 (Monothiol glutaredoxin-S2 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS2 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 9.1e-23
Identity = 57/109 (52.29%), Postives = 76/109 (69.72%), Query Frame = 0


Query: 24  SLSLDAA---ESGETKIRRLISEHPVIIFSRNSCYMCHVMKKLLATIGVHPTVIELDDD- 83
           SL++D A   E+   ++ RL+ E PV++F+R  CYM HVM++LLA +G H TVIEL+   
Sbjct: 15  SLTIDPAGEEEAPAERVGRLVRESPVVVFARRGCYMAHVMRRLLAAVGAHATVIELEGGA 74

Query: 84  GEIEALASFSAAAAPAVFIGGNFLGGLESLVALHLSGHLVPKLVEVGAL 129
            E E  A    AA PA+F+GG+ +GGLE L+ LHLSG LVP+L EVGAL
Sbjct: 75  AEEEEAALGGGAALPALFVGGDPVGGLEGLMGLHLSGRLVPRLREVGAL 123

[Close]

BLAST of Sed0002881 vs. ExPASy Swiss-Prot
Match: Q9SGP6 (Glutaredoxin-C9 OS=Arabidopsis thaliana OX=3702 GN=GRXC9 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 5.5e-20
Identity = 53/139 (38.13%), Postives = 82/139 (58.99%), Query Frame = 0


Query: 1   MQGLRRCSDDLLHLDLSPAPSAASLSLDAAESGETKIRRLISEHPVIIFSRNSCYMCHVM 60
           MQG   C+ +  ++  +   S   LSL    +GE ++R ++ E+ VI+  R  C MCHV+
Sbjct: 1   MQGTISCARN-YNMTTTVGESLRPLSLKTQGNGE-RVRMVVEENAVIVIGRRGCCMCHVV 60

Query: 61  KKLLATIGVHPTVIELDDDGEIEALASF---------SAAAAPAVFIGGNFLGGLESLVA 120
           ++LL  +GV+P V+E+D++ E E L+                PAV++GG   GGL+ ++A
Sbjct: 61  RRLLLGLGVNPAVLEIDEEREDEVLSELENIGVQGGGGTVKLPAVYVGGRLFGGLDRVMA 120

Query: 121 LHLSGHLVPKLVEVGALWV 131
            H+SG LVP L EVGALW+
Sbjct: 121 THISGELVPILKEVGALWL 137

[Close]

BLAST of Sed0002881 vs. ExPASy TrEMBL
Match: A0A5D3D950 (Glutaredoxin-C6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002100 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 6.3e-51
Identity = 113/136 (83.09%), Postives = 119/136 (87.50%), Query Frame = 0


Query: 1   MQGLRRCSDDLLHLDLSP----APSAASLSLDAAESGETKIRRLISEHPVIIFSRNSCYM 60
           MQGLRRCS+DLLHLDLSP     PS ASLS+D AES +T+IRRLISEHPVIIFSR SC M
Sbjct: 1   MQGLRRCSNDLLHLDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCM 60

Query: 61  CHVMKKLLATIGVHPTVIELDDDGEIEALASFSA--AAAPAVFIGGNFLGGLESLVALHL 120
           CHVMKKLLATIGVHPTVIEL+DD EI ALASFS+   A PAVFIGG FLGGLESLVALHL
Sbjct: 61  CHVMKKLLATIGVHPTVIELEDD-EIHALASFSSTTTATPAVFIGGAFLGGLESLVALHL 120

Query: 121 SGHLVPKLVEVGALWV 131
           SGHLVPKLVEVGALWV
Sbjct: 121 SGHLVPKLVEVGALWV 135

[Close]

BLAST of Sed0002881 vs. ExPASy TrEMBL
Match: A0A0A0L5B1 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G646150 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 6.3e-51
Identity = 113/136 (83.09%), Postives = 119/136 (87.50%), Query Frame = 0


Query: 1   MQGLRRCSDDLLHLDLSP----APSAASLSLDAAESGETKIRRLISEHPVIIFSRNSCYM 60
           MQGLRRCS+DLLHLDLSP     PS ASLS+D AES +T+IRRLISEHPVIIFSR SC M
Sbjct: 1   MQGLRRCSNDLLHLDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCM 60

Query: 61  CHVMKKLLATIGVHPTVIELDDDGEIEALASFSA--AAAPAVFIGGNFLGGLESLVALHL 120
           CHVMKKLLATIGVHPTVIEL+DD EI ALASFS+   A PAVFIGG FLGGLESLVALHL
Sbjct: 61  CHVMKKLLATIGVHPTVIELEDD-EIHALASFSSTTTATPAVFIGGAFLGGLESLVALHL 120

Query: 121 SGHLVPKLVEVGALWV 131
           SGHLVPKLVEVGALWV
Sbjct: 121 SGHLVPKLVEVGALWV 135

[Close]

BLAST of Sed0002881 vs. ExPASy TrEMBL
Match: A0A1S3BUK1 (glutaredoxin-C6 OS=Cucumis melo OX=3656 GN=LOC103493666 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 6.3e-51
Identity = 113/136 (83.09%), Postives = 119/136 (87.50%), Query Frame = 0


Query: 1   MQGLRRCSDDLLHLDLSP----APSAASLSLDAAESGETKIRRLISEHPVIIFSRNSCYM 60
           MQGLRRCS+DLLHLDLSP     PS ASLS+D AES +T+IRRLISEHPVIIFSR SC M
Sbjct: 1   MQGLRRCSNDLLHLDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCM 60

Query: 61  CHVMKKLLATIGVHPTVIELDDDGEIEALASFSA--AAAPAVFIGGNFLGGLESLVALHL 120
           CHVMKKLLATIGVHPTVIEL+DD EI ALASFS+   A PAVFIGG FLGGLESLVALHL
Sbjct: 61  CHVMKKLLATIGVHPTVIELEDD-EIHALASFSSTTTATPAVFIGGAFLGGLESLVALHL 120

Query: 121 SGHLVPKLVEVGALWV 131
           SGHLVPKLVEVGALWV
Sbjct: 121 SGHLVPKLVEVGALWV 135

[Close]

BLAST of Sed0002881 vs. ExPASy TrEMBL
Match: A0A6J1IWK8 (glutaredoxin-C6 OS=Cucurbita maxima OX=3661 GN=LOC111481252 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 7.0e-50
Identity = 112/136 (82.35%), Postives = 121/136 (88.97%), Query Frame = 0


Query: 1   MQGLRRCSDDLLHLDLSP---APSAASLSLDAAESGETKIRRLISEHPVIIFSRNSCYMC 60
           MQGLRRCS+DLL LDLSP    PS ASLS+D AES ET+IRRLISEHPVIIFSR SC MC
Sbjct: 1   MQGLRRCSNDLLLLDLSPPSSVPSTASLSIDDAESAETRIRRLISEHPVIIFSRTSCCMC 60

Query: 61  HVMKKLLATIGVHPTVIELDDDGEIEALASFSA---AAAPAVFIGGNFLGGLESLVALHL 120
           HVMKKLLA+IGVHPTVIELDD  EI+ALASFS+   AAAPAVFIGG+++GGLESLVALHL
Sbjct: 61  HVMKKLLASIGVHPTVIELDDH-EIDALASFSSTTPAAAPAVFIGGSYVGGLESLVALHL 120

Query: 121 SGHLVPKLVEVGALWV 131
           SGHLVPKLVEVGALWV
Sbjct: 121 SGHLVPKLVEVGALWV 135

[Close]

BLAST of Sed0002881 vs. ExPASy TrEMBL
Match: A0A6J1FK67 (glutaredoxin-C6-like OS=Cucurbita moschata OX=3662 GN=LOC111446482 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 9.1e-50
Identity = 111/136 (81.62%), Postives = 121/136 (88.97%), Query Frame = 0


Query: 1   MQGLRRCSDDLLHLDLSP---APSAASLSLDAAESGETKIRRLISEHPVIIFSRNSCYMC 60
           MQGLRRCS+DLL LDLSP    PS ASLS+D AES ET+IRRLISEHPVIIFSR SC MC
Sbjct: 1   MQGLRRCSNDLLLLDLSPPSSVPSTASLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC 60

Query: 61  HVMKKLLATIGVHPTVIELDDDGEIEALASFSA---AAAPAVFIGGNFLGGLESLVALHL 120
           HVMKKLLA+IGVHPTVIELDD  EI+ALASFS+   AAAPAVF+GG+++GGLESLVALHL
Sbjct: 61  HVMKKLLASIGVHPTVIELDDH-EIDALASFSSTTPAAAPAVFMGGSYVGGLESLVALHL 120

Query: 121 SGHLVPKLVEVGALWV 131
           SGHLVPKLVEVGALWV
Sbjct: 121 SGHLVPKLVEVGALWV 135

[Close]

BLAST of Sed0002881 vs. TAIR 10
Match: AT4G33040.1 (Thioredoxin superfamily protein )

HSP 1 Score: 156.0 bits (393), Expect = 2.1e-38
Identity = 90/140 (64.29%), Postives = 106/140 (75.71%), Query Frame = 0


Query: 3   GLRRCSDDLLHLDLSP--APSAASLSLDAAESGETKIRRLISEHPVIIFSRNSCYMCHVM 62
           GL+R S+D++ LDL+P    S+ SLS+D  ES E KIRRLISEHPVIIFSR+SC MCHVM
Sbjct: 6   GLQRFSNDVVRLDLTPPSQTSSTSLSIDEEESTEAKIRRLISEHPVIIFSRSSCCMCHVM 65

Query: 63  KKLLATIGVHPTVIELDDDGEIEALAS-----FSAAAA-----PAVFIGGNFLGGLESLV 122
           K+LLATIGV PTVIELDD  E+ +L +     +S   +     PAVFIG   +GGLESLV
Sbjct: 66  KRLLATIGVIPTVIELDDH-EVSSLPTALQDEYSGGVSVVGPPPAVFIGRECVGGLESLV 125

Query: 123 ALHLSGHLVPKLVEVGALWV 131
           ALHLSG LVPKLV+VGALWV
Sbjct: 126 ALHLSGQLVPKLVQVGALWV 144

[Close]

BLAST of Sed0002881 vs. TAIR 10
Match: AT5G11930.1 (Thioredoxin superfamily protein )

HSP 1 Score: 155.6 bits (392), Expect = 2.7e-38
Identity = 90/148 (60.81%), Postives = 106/148 (71.62%), Query Frame = 0


Query: 1   MQGLRRCSDDLLHLDLS-----------PAPS-------AASLSLDAAESGETKIRRLIS 60
           M+GLR CS+D + LDL+           PAPS       + SLS D  E+ E+KI RLIS
Sbjct: 4   MRGLRNCSNDAVTLDLTVHPPPPPPLPPPAPSTVSSSTASTSLSFDEEETSESKIGRLIS 63

Query: 61  EHPVIIFSR-NSCYMCHVMKKLLATIGVHPTVIELDDDGEIEALASFSAAAAPAVFIGGN 120
           EHPVIIF+R +SC MCHVMKKLL+T+GVHPTVIE+ DDGEI  LA     AAP +FIGG 
Sbjct: 64  EHPVIIFTRFSSCCMCHVMKKLLSTVGVHPTVIEI-DDGEIAYLA---VEAAPVLFIGGT 123

Query: 121 FLGGLESLVALHLSGHLVPKLVEVGALW 130
            +GG ESLVALHLSG L+P+LVEVGALW
Sbjct: 124 CVGGFESLVALHLSGQLIPRLVEVGALW 147

[Close]

BLAST of Sed0002881 vs. TAIR 10
Match: AT1G28480.1 (Thioredoxin superfamily protein )

HSP 1 Score: 98.6 bits (244), Expect = 3.9e-21
Identity = 53/139 (38.13%), Postives = 82/139 (58.99%), Query Frame = 0


Query: 1   MQGLRRCSDDLLHLDLSPAPSAASLSLDAAESGETKIRRLISEHPVIIFSRNSCYMCHVM 60
           MQG   C+ +  ++  +   S   LSL    +GE ++R ++ E+ VI+  R  C MCHV+
Sbjct: 1   MQGTISCARN-YNMTTTVGESLRPLSLKTQGNGE-RVRMVVEENAVIVIGRRGCCMCHVV 60

Query: 61  KKLLATIGVHPTVIELDDDGEIEALASF---------SAAAAPAVFIGGNFLGGLESLVA 120
           ++LL  +GV+P V+E+D++ E E L+                PAV++GG   GGL+ ++A
Sbjct: 61  RRLLLGLGVNPAVLEIDEEREDEVLSELENIGVQGGGGTVKLPAVYVGGRLFGGLDRVMA 120

Query: 121 LHLSGHLVPKLVEVGALWV 131
            H+SG LVP L EVGALW+
Sbjct: 121 THISGELVPILKEVGALWL 137

[Close]

BLAST of Sed0002881 vs. TAIR 10
Match: AT4G15680.1 (Thioredoxin superfamily protein )

HSP 1 Score: 87.8 bits (216), Expect = 6.9e-18
Identity = 48/100 (48.00%), Postives = 65/100 (65.00%), Query Frame = 0


Query: 36  KIRRLISEHPVIIFSRNSCYMCHVMKKLLATIGVHPTVIELDD---DGEIE-ALASFSAA 95
           K++++ISE  V+IFS+NSC M H +K L    GV+PT+ ELD+     EIE ALA    +
Sbjct: 3   KLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQLGCS 62

Query: 96  -AAPAVFIGGNFLGGLESLVALHLSGHLVPKLVEVGALWV 131
              P VFIGG  +GG   +++LHL+  LVP L  VGALW+
Sbjct: 63  PTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALWL 102

[Close]

BLAST of Sed0002881 vs. TAIR 10
Match: AT4G15660.1 (Thioredoxin superfamily protein )

HSP 1 Score: 86.3 bits (212), Expect = 2.0e-17
Identity = 47/100 (47.00%), Postives = 64/100 (64.00%), Query Frame = 0


Query: 36  KIRRLISEHPVIIFSRNSCYMCHVMKKLLATIGVHPTVIELDD---DGEIE-ALASFSAA 95
           KI+++ISE  V+IFS NSC M H +K L   +GV+PT+ ELD+     EIE ALA    +
Sbjct: 3   KIQKMISEKSVVIFSNNSCCMSHTIKTLFLDLGVNPTIYELDEINRGKEIEYALAQLGCS 62

Query: 96  -AAPAVFIGGNFLGGLESLVALHLSGHLVPKLVEVGALWV 131
              P VFIGG  +GG   +++LHL+  L+P L   GALW+
Sbjct: 63  PTVPVVFIGGQLVGGANQVMSLHLNRSLIPMLKRFGALWL 102

The following BLAST results are available for this feature:

BLAST of Sed0002881 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141321.1	1.3e-50	83.09	glutaredoxin-C6 [Cucumis sativus] >XP_008452734.1 PREDICTED: glutaredoxin-C6 [Cu...	[more]
XP_038899998.1	2.9e-50	81.88	glutaredoxin-C6-like [Benincasa hispida]	[more]
KAG6608371.1	8.4e-50	82.35	Glutaredoxin-C6, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022982422.1	1.4e-49	82.35	glutaredoxin-C6 [Cucurbita maxima]	[more]
XP_022941086.1	1.9e-49	81.62	glutaredoxin-C6-like [Cucurbita moschata]	[more]

BLAST of Sed0002881 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9S3	2.9e-37	64.29	Glutaredoxin-C6 OS=Arabidopsis thaliana OX=3702 GN=GRXC6 PE=2 SV=2	[more]
Q29PZ1	3.8e-37	60.81	Glutaredoxin-C10 OS=Arabidopsis thaliana OX=3702 GN=GRXC10 PE=2 SV=1	[more]
Q0DK35	2.2e-24	56.12	Glutaredoxin-C7 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC7 PE=3 SV=1	[more]
Q5SMY5	9.1e-23	52.29	Monothiol glutaredoxin-S2 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS2 PE=2...	[more]
Q9SGP6	5.5e-20	38.13	Glutaredoxin-C9 OS=Arabidopsis thaliana OX=3702 GN=GRXC9 PE=1 SV=1	[more]

BLAST of Sed0002881 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D950	6.3e-51	83.09	Glutaredoxin-C6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134...	[more]
A0A0A0L5B1	6.3e-51	83.09	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G64615...	[more]
A0A1S3BUK1	6.3e-51	83.09	glutaredoxin-C6 OS=Cucumis melo OX=3656 GN=LOC103493666 PE=3 SV=1	[more]
A0A6J1IWK8	7.0e-50	82.35	glutaredoxin-C6 OS=Cucurbita maxima OX=3661 GN=LOC111481252 PE=3 SV=1	[more]
A0A6J1FK67	9.1e-50	81.62	glutaredoxin-C6-like OS=Cucurbita moschata OX=3662 GN=LOC111446482 PE=3 SV=1	[more]

BLAST of Sed0002881 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33040.1	2.1e-38	64.29	Thioredoxin superfamily protein	[more]
AT5G11930.1	2.7e-38	60.81	Thioredoxin superfamily protein	[more]
AT1G28480.1	3.9e-21	38.13	Thioredoxin superfamily protein	[more]
AT4G15680.1	6.9e-18	48.00	Thioredoxin superfamily protein	[more]
AT4G15660.1	2.0e-17	47.00	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 100..113 score: 30.95 coord: 46..64 score: 33.99 coord: 86..99 score: 27.38
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 37..130 e-value: 8.5E-35 score: 116.7
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 5..129
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 46..102 e-value: 2.4E-9 score: 37.3
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 26..129 e-value: 2.2E-24 score: 87.2
None	No IPR available	PANTHER	PTHR10168:SF56	GLUTAREDOXIN-C6	coord: 5..129
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 34..129 score: 19.717386
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 35..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002881.1	Sed0002881.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0097573	glutathione oxidoreductase activity