Sed0002871 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGTCCTCAATTCTCAGAGAAATTCAAGTCCGTTCCGTACAGCGAAGCTCTGGCTGATTCTAGGGTTCATATTATCCCTCATATCTACCCATACAGTTCTCGCCAAATCTCGCCGTCCACCCACTGTAAGTTCTTCGATCACTTCATCTTTACCTGTTCATTTTCTCGGATCGCAATTGATTCCTCTGGATCGTATCAATTGTTCAGGATGTTGAAACCAGGCAAAAGAAGCAGGACTGTTACGCTGATATCGAGGGGTGAGCGTAATTTCAAGCTATTTTTAGGATTTTTTTTCATTTTCTCGAATTGAGTATAGTTGGAAAATGATCTTAGAATGGAATGGATTGATGGAAATGGAACTGATTGGTTGTAATTAAATTCAGTCCCACTGTCACGGATTCGATCTCGAAAATCGGCTCTAGCAGTGTTATGTAGGGTGTCTGGTCCCCTTATCCCAATTTTTTAAAAAAAGAGAGAAAAGAAAGAAAATGATCTGAGAGCAAGTTTGGAATGTGATTTCGCTTTCTATTTTTCAATCTTATTACTGTCGTTTTGGTTAGTTGCTATAATGTTGTGAAAATGTGCAGCGGATTGTGGGGTAGGCATTGCAAATCTAAGGCAATCGAGAAGGAAAATTGTGCCCTGCGATGTCTTTCTCCTACTTGTTATGATATAGTTTATGGTAGCGATCCGGTGGGCAATTTTCTGTTTACTTTCCCGTGCTCGTACTTCTTTTACTGTTTTTTCTTTAATTGCGAATTCTAATGTTGGATTTGTGTTGATGCAGCTCGAAGAAGGAGAGAAGGACCTTGCTAGGGGTGAAGAGTTTAAGTTTTGTATCTATAAGTAAGTTAAACATACTTGTTCAATTTTCTGAGAAACTAAAGTTGAGCATTTCTTATTCCATATCTTAACAATGTCGGCCTTTTCAGCTTTAATCATAGATACATTGAACCATCGTGGGTTGTTTTAGTGGCCAATAGGGCAATAGAAACCAAAAGGTCATGGGTTCAATTCATGGTGGCGAACTATCTAGGAATTAATTTCTTACATATTTTCTTTACATTCAAATGTTGTAGCGCTTTAGGTGAGAATAGTTGAGATGTGCGTATGTTGGTCCGAAGACAGCTAGAGATGTCATTAAAAAAACATTGCTCCAGTAGTGATAAGTGGGTATTCCATATCAACCAACATCAATGCGATAAGAACCTCTGCTAATTATTATAAGCTAATTCCTTTTATTCCCATACTTTAATTGAGATAGTAGATGAGTATCAAGCTTGTTGGTTGGTTGGATCAGTGTTTGGTGGGTGGGTATTCTAAATAATCTGATGTATTTGAGAGATTTCATCAGCTTGGCAAAACAAGGAAGAAGACATGGGTAGACCCTTAATTGTTATTAGAAATTTGTTTACATTTCAGGGCATGCTCTGCCTTTTCCTTCTTTCCACTGTCCACTTCATCCTCCAAGCATTTGAATAGAAATTTGAAAATGTTTTTGCTCGGTTCACTAGTTCATACTATACATTTTTAATCAAGTCTTTTGATGCGGCGTGCATGGAAGATTGATTTTAAGGAGCTTTGACATTGGATTTTGTATTTGTTTGCCTTTGGATGGCTGTGAAGGACTCTTGCCACTACTAATGTTCTAGTCTACATAGTTTGTAAATCACTGTACACATCTTTTCAGTTAGGTTCTTGCATCAGGGATTTCCCTATATGCTTAGAGCCAATTTTAAAATTTTAACCATTGGAGAATCAAAATGGTATCCTATTATATTTTCACTTCTTTACTTCTGCTTTTTCCGTGTTTAGAAGGAATGTAAGCAGCTCAAACAATTTGGATCATTAGTATAACCTTAGAGGATTTACTTTCTCTTTACCTTGTTGTTAAATGTCTAAACAGGCGCTTGCATATGTTGCCTCCTTTTCCCCACACAACACTTTACAATACTTTTCTTATTTGCTTTCATTAAGCTAAAAGAGTATTGTTTGTCTGGTTTGAGCTCTCGTCGTAGACTATTATTATTTTTTGATAGGAAACGAACTATTTCTTGATATACGAAAGAGTTACCGAGAAGATACACACTTTTCAACCACATGTTGTTTCAATTCGGTTCTTGCAACCAGAGAAGGAAGAAGAGCCTTGAGAAACTAGGAGACGAGCCAAGAGAAACTTTCTGAAAGTAGGATAAATGCTTCTCAGCCTAATTGATTCCACATTTGCTTGTCAATTAGATTTCTATTTCAATTTCAATTTCAATCAATACTTAAATTGATCTAACATTGGTGAACCTTATAGACTTTCAGCATTTGGGGTTTATATATTGAATTTAAAACTTTGCAACAATTGGTCTAGGGAATCGGTTAAGATATGAAACTTTTGTTTTCTTGCAGGTTGTCAAAGGGAGAGAGTCTGGAGGGTATTAAGGGCTCCTTTGACTACTGA ATGAAAGTCCTCAATTCTCAGAGAAATTCAAGTCCGTTCCGTACAGCGAAGCTCTGGCTGATTCTAGGGTTCATATTATCCCTCATATCTACCCATACAGTTCTCGCCAAATCTCGCCGTCCACCCACTGATGTTGAAACCAGGCAAAAGAAGCAGGACTGTTACGCTGATATCGAGGGCGGATTGTGGGGTAGGCATTGCAAATCTAAGGCAATCGAGAAGGAAAATTGTGCCCTGCGATGTCTTTCTCCTACTTGTTATGATATAGTTTATGGTAGCGATCCGCTCGAAGAAGGAGAGAAGGACCTTGCTAGGGGTGAAGAGTTTAAGTTTTGTATCTATAAGTTGTCAAAGGGAGAGAGTCTGGAGGGTATTAAGGGCTCCTTTGACTACTGA ATGAAAGTCCTCAATTCTCAGAGAAATTCAAGTCCGTTCCGTACAGCGAAGCTCTGGCTGATTCTAGGGTTCATATTATCCCTCATATCTACCCATACAGTTCTCGCCAAATCTCGCCGTCCACCCACTGATGTTGAAACCAGGCAAAAGAAGCAGGACTGTTACGCTGATATCGAGGGCGGATTGTGGGGTAGGCATTGCAAATCTAAGGCAATCGAGAAGGAAAATTGTGCCCTGCGATGTCTTTCTCCTACTTGTTATGATATAGTTTATGGTAGCGATCCGCTCGAAGAAGGAGAGAAGGACCTTGCTAGGGGTGAAGAGTTTAAGTTTTGTATCTATAAGTTGTCAAAGGGAGAGAGTCTGGAGGGTATTAAGGGCTCCTTTGACTACTGA MKVLNSQRNSSPFRTAKLWLILGFILSLISTHTVLAKSRRPPTDVETRQKKQDCYADIEGGLWGRHCKSKAIEKENCALRCLSPTCYDIVYGSDPLEEGEKDLARGEEFKFCIYKLSKGESLEGIKGSFDY Homology
BLAST of Sed0002871 vs. NCBI nr
Match: XP_023526484.1 (uncharacterized protein LOC111789973 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 231.5 bits (589), Expect = 4.2e-57 Identity = 107/131 (81.68%), Postives = 116/131 (88.55%), Query Frame = 0
BLAST of Sed0002871 vs. NCBI nr
Match: XP_022980443.1 (uncharacterized protein LOC111479810 [Cucurbita maxima]) HSP 1 Score: 230.3 bits (586), Expect = 9.4e-57 Identity = 107/131 (81.68%), Postives = 116/131 (88.55%), Query Frame = 0
BLAST of Sed0002871 vs. NCBI nr
Match: XP_022924279.1 (uncharacterized protein LOC111431806 [Cucurbita moschata]) HSP 1 Score: 227.6 bits (579), Expect = 6.1e-56 Identity = 106/131 (80.92%), Postives = 114/131 (87.02%), Query Frame = 0
BLAST of Sed0002871 vs. NCBI nr
Match: XP_038899863.1 (uncharacterized protein LOC120087079 [Benincasa hispida]) HSP 1 Score: 216.5 bits (550), Expect = 1.4e-52 Identity = 102/131 (77.86%), Postives = 111/131 (84.73%), Query Frame = 0
BLAST of Sed0002871 vs. NCBI nr
Match: XP_008438284.1 (PREDICTED: uncharacterized protein LOC103483444 [Cucumis melo] >KAA0049118.1 Protein OS-9 [Cucumis melo var. makuwa] >TYK17446.1 Protein OS-9 [Cucumis melo var. makuwa]) HSP 1 Score: 214.2 bits (544), Expect = 6.9e-52 Identity = 98/131 (74.81%), Postives = 111/131 (84.73%), Query Frame = 0
BLAST of Sed0002871 vs. ExPASy TrEMBL
Match: A0A6J1IZB5 (uncharacterized protein LOC111479810 OS=Cucurbita maxima OX=3661 GN=LOC111479810 PE=4 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 4.5e-57 Identity = 107/131 (81.68%), Postives = 116/131 (88.55%), Query Frame = 0
BLAST of Sed0002871 vs. ExPASy TrEMBL
Match: A0A6J1E8P8 (uncharacterized protein LOC111431806 OS=Cucurbita moschata OX=3662 GN=LOC111431806 PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 2.9e-56 Identity = 106/131 (80.92%), Postives = 114/131 (87.02%), Query Frame = 0
BLAST of Sed0002871 vs. ExPASy TrEMBL
Match: A0A5D3D394 (Protein OS-9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003100 PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 3.4e-52 Identity = 98/131 (74.81%), Postives = 111/131 (84.73%), Query Frame = 0
BLAST of Sed0002871 vs. ExPASy TrEMBL
Match: A0A1S3AW07 (uncharacterized protein LOC103483444 OS=Cucumis melo OX=3656 GN=LOC103483444 PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 3.4e-52 Identity = 98/131 (74.81%), Postives = 111/131 (84.73%), Query Frame = 0
BLAST of Sed0002871 vs. ExPASy TrEMBL
Match: A0A0A0L9A0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129480 PE=4 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 4.4e-52 Identity = 99/131 (75.57%), Postives = 110/131 (83.97%), Query Frame = 0
BLAST of Sed0002871 vs. TAIR 10
Match: AT5G17610.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 154.1 bits (388), Expect = 7.9e-38 Identity = 69/109 (63.30%), Postives = 83/109 (76.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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