Sed0002865 (gene) Chayote v1

Overview


Name	Sed0002865
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Microtubule-associated protein 6, putative
Location	LG04: 43705762 .. 43706626 (+)
RNA-Seq Expression	Sed0002865
Synteny	Sed0002865

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCTCCAATCCTAAACCTAATTTCTCACATTCATTGACCATGGTGGTTCCTCTCGGCCCCGGCAAGTTCTACGGCAGCAGCCTCCCCCGTCCCCGCTACTACACCGACGTCAAGCTCAACGACCACCGCATCGATCCACCGGCGCCGGTCCTCGATCCGTTTCTCTCATGGGCGAACGAGGCTCACTGGTCAATGGGCGGCCTCTCCTTCAATCGCCTCCGGCTTCAGGGTCGAATCGAAGGAAATGTCGAAAAGCTTCGATCGGAGCGGGAGAAGATCGAAAAGAAGAAGAAAAAAGCAGAGAAGGTGGACTCTGCTACTAGATCTGACCTAGATGGTGGAGCTGATGATAATCGGCGATCGAAGAAGTCCAAATCTGTATCTCCTCCGCCGGCGCCGGTCGCAACAAAGAGGCGACGGTTGATGCCTTTGTTTGACGATGAGGAGGATTTTGGCGAGCATCAAGAAGAAATTGGGGTTGTGAAGAGAAGGCTGAGGCTCGTGAAGAAGCTTGGAGATGATTTTGATCGCGTGGCGGCAGGGAACCGGTATCAAGGTTCAAAAGGAAATGGGATTAGTGAATCTGTAATGAAGATTGTTGAGGAGATTAACGATGATAATCCCAAAGGGAAAAAGATTAACAATGAAAGAAAGGGAAAGAAAGTGGAGTCTGGCTCTGTTTCTGTGAGTAGAACATCTCCCAGATTAGCTAATAAGCGTGGATTGAATTGATTTAAATATAGTGTAGGATATTAGTTATTGATGTTTTTCTTTTTCTAAACTTGACTGAAATCTGTAATGCTGTTGATTTCTTTGTTTGCCTTTGAAATGTGAAAATTGAATGTGGATTCTGGAATTTCTGAA

mRNA sequence

ATTCTCCAATCCTAAACCTAATTTCTCACATTCATTGACCATGGTGGTTCCTCTCGGCCCCGGCAAGTTCTACGGCAGCAGCCTCCCCCGTCCCCGCTACTACACCGACGTCAAGCTCAACGACCACCGCATCGATCCACCGGCGCCGGTCCTCGATCCGTTTCTCTCATGGGCGAACGAGGCTCACTGGTCAATGGGCGGCCTCTCCTTCAATCGCCTCCGGCTTCAGGGTCGAATCGAAGGAAATGTCGAAAAGCTTCGATCGGAGCGGGAGAAGATCGAAAAGAAGAAGAAAAAAGCAGAGAAGGTGGACTCTGCTACTAGATCTGACCTAGATGGTGGAGCTGATGATAATCGGCGATCGAAGAAGTCCAAATCTGTATCTCCTCCGCCGGCGCCGGTCGCAACAAAGAGGCGACGGTTGATGCCTTTGTTTGACGATGAGGAGGATTTTGGCGAGCATCAAGAAGAAATTGGGGTTGTGAAGAGAAGGCTGAGGCTCGTGAAGAAGCTTGGAGATGATTTTGATCGCGTGGCGGCAGGGAACCGGTATCAAGGTTCAAAAGGAAATGGGATTAGTGAATCTGTAATGAAGATTGTTGAGGAGATTAACGATGATAATCCCAAAGGGAAAAAGATTAACAATGAAAGAAAGGGAAAGAAAGTGGAGTCTGGCTCTGTTTCTGTGAGTAGAACATCTCCCAGATTAGCTAATAAGCGTGGATTGAATTGATTTAAATATAGTGTAGGATATTAGTTATTGATGTTTTTCTTTTTCTAAACTTGACTGAAATCTGTAATGCTGTTGATTTCTTTGTTTGCCTTTGAAATGTGAAAATTGAATGTGGATTCTGGAATTTCTGAA

Coding sequence (CDS)

ATGGTGGTTCCTCTCGGCCCCGGCAAGTTCTACGGCAGCAGCCTCCCCCGTCCCCGCTACTACACCGACGTCAAGCTCAACGACCACCGCATCGATCCACCGGCGCCGGTCCTCGATCCGTTTCTCTCATGGGCGAACGAGGCTCACTGGTCAATGGGCGGCCTCTCCTTCAATCGCCTCCGGCTTCAGGGTCGAATCGAAGGAAATGTCGAAAAGCTTCGATCGGAGCGGGAGAAGATCGAAAAGAAGAAGAAAAAAGCAGAGAAGGTGGACTCTGCTACTAGATCTGACCTAGATGGTGGAGCTGATGATAATCGGCGATCGAAGAAGTCCAAATCTGTATCTCCTCCGCCGGCGCCGGTCGCAACAAAGAGGCGACGGTTGATGCCTTTGTTTGACGATGAGGAGGATTTTGGCGAGCATCAAGAAGAAATTGGGGTTGTGAAGAGAAGGCTGAGGCTCGTGAAGAAGCTTGGAGATGATTTTGATCGCGTGGCGGCAGGGAACCGGTATCAAGGTTCAAAAGGAAATGGGATTAGTGAATCTGTAATGAAGATTGTTGAGGAGATTAACGATGATAATCCCAAAGGGAAAAAGATTAACAATGAAAGAAAGGGAAAGAAAGTGGAGTCTGGCTCTGTTTCTGTGAGTAGAACATCTCCCAGATTAGCTAATAAGCGTGGATTGAATTGA

Protein sequence

MVVPLGPGKFYGSSLPRPRYYTDVKLNDHRIDPPAPVLDPFLSWANEAHWSMGGLSFNRLRLQGRIEGNVEKLRSEREKIEKKKKKAEKVDSATRSDLDGGADDNRRSKKSKSVSPPPAPVATKRRRLMPLFDDEEDFGEHQEEIGVVKRRLRLVKKLGDDFDRVAAGNRYQGSKGNGISESVMKIVEEINDDNPKGKKINNERKGKKVESGSVSVSRTSPRLANKRGLN

Homology

[Close]

BLAST of Sed0002865 vs. NCBI nr
Match: XP_038888811.1 (uncharacterized protein LOC120078599 [Benincasa hispida])

HSP 1 Score: 323.2 bits (827), Expect = 1.9e-84
Identity = 179/243 (73.66%), Postives = 202/243 (83.13%), Query Frame = 0


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDHRIDPPAPVLDPFLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYYTDVKLND R+DPP PVLDP LSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNVEKLRSEREKIEKKKKKAEKVDSA-TRSDLDGGADDNRRSKKSKSVSPPPA 120
           RLQGRIEGNV KLR+EREK+ K+K +A+K+DSA  RSD D GA+ NR+ KK+KSVSPPPA
Sbjct: 61  RLQGRIEGNVHKLRAEREKVAKEKLRAKKLDSAPKRSDPDNGANANRQLKKAKSVSPPPA 120

Query: 121 PVATKRRRLMPLFDDE-EDFGEHQEEIGVVKRRLRLVKKLGDDFDRVAA--------GNR 180
           P+ATKRRRLM LF+DE +D G  +E IGVVKR  RLVKKLGDDFDRVAA        G+R
Sbjct: 121 PIATKRRRLMVLFEDEDDDVGMDKEVIGVVKR--RLVKKLGDDFDRVAAESKRNQLKGSR 180

Query: 181 YQGSKGNGISESVMKIVEEINDDNPKGKKINNERKGK---KVESGSVSVSRTSPRLANKR 231
            + S+ +G+ ESVMKIVEEIND+N KGKK  +  KGK   K+ESGSVS +RTSPRLANKR
Sbjct: 181 DRSSEIDGVGESVMKIVEEINDENNKGKKTKSGGKGKNGGKMESGSVSATRTSPRLANKR 240

[Close]

BLAST of Sed0002865 vs. NCBI nr
Match: XP_004136827.1 (uncharacterized protein LOC101207471 [Cucumis sativus] >KGN43619.1 hypothetical protein Csa_020409 [Cucumis sativus])

HSP 1 Score: 322.4 bits (825), Expect = 3.2e-84
Identity = 177/242 (73.14%), Postives = 199/242 (82.23%), Query Frame = 0


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDHRIDPPAPVLDPFLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYY+DVK ND R+DPP PVLDP LSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYSDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNVEKLRSEREKIEKKKKKAEKVDSA-TRSDLDGGADDNRRSKKSKSVSPPPA 120
           RLQGRIEGNV KLR+EREK+ KKK KA+K+DSA  RSD D GAD +R+ KK++SV+PPPA
Sbjct: 61  RLQGRIEGNVHKLRTEREKVAKKKLKAQKLDSAPKRSDPDAGADAHRQLKKARSVTPPPA 120

Query: 121 PVATKRRRLMPLFDDEEDFGEHQEEIGVVKRRLRLVKKLGDDFDRVAAGNRYQGSKG--- 180
           P+ATKRRRLM LF+DE+D G  +EEIGVVKR  RLVKKLGDDFDRVAA ++    KG   
Sbjct: 121 PIATKRRRLMVLFEDEDDIGMEKEEIGVVKR--RLVKKLGDDFDRVAAESKRSQLKGLKD 180

Query: 181 -----NGISESVMKIVEEINDDNPKGKKINNERKGK---KVESGSVSVSRTSPRLANKRG 231
                NG++ESVMKIVEEIN++N K KK N ERKGK    VES SVS SR+SPRLANKR 
Sbjct: 181 RSSEINGVNESVMKIVEEINNENTKVKKTNIERKGKTGGNVESVSVSGSRSSPRLANKRA 240

[Close]

BLAST of Sed0002865 vs. NCBI nr
Match: XP_022148022.1 (uncharacterized protein LOC111016810 [Momordica charantia])

HSP 1 Score: 322.0 bits (824), Expect = 4.1e-84
Identity = 181/242 (74.79%), Postives = 199/242 (82.23%), Query Frame = 0


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDHRIDPPAPVLDPFLSWANEAHWSMGGLSFNRL 60
           MVV LGPGKFYGSSLPRPRYYTDVKLND R+DPP PVLDP L WANEAHWSMGGLSFNRL
Sbjct: 1   MVVALGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLLWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNVEKLRSEREKIEKKKKKAEKVDSATRSDLDGGADDNRRSKKSKSVSPPPAP 120
           RLQGRIEGN++KLR EREKI KKKKKAEK  ++ RSDLD GAD  RR  KSKSVSPPPAP
Sbjct: 61  RLQGRIEGNIDKLRVEREKIAKKKKKAEKDSASKRSDLDAGADVVRRLGKSKSVSPPPAP 120

Query: 121 VATKRRRLMPLFDDE-EDFGEHQEEIGVVKRRLRLVKKLGDDFDRVAAG--------NRY 180
           +ATKRRRL+ LFDDE +D GE++EEIGVVKR  RLVKKLGDDFDRVAA         +R 
Sbjct: 121 IATKRRRLIALFDDEDDDGGEYKEEIGVVKR--RLVKKLGDDFDRVAAESKRNQLKYSRD 180

Query: 181 QGSKGNGISESVMKIVEEINDDNPKGKKINNERKGKKV---ESGSVSVSRTSPRLANKRG 231
           + S  +GI ESVMKIVEEIN  + +GKK+N+ERKGK V   ESGSVS +RTSPRLANKRG
Sbjct: 181 RISPVDGIGESVMKIVEEINGADTEGKKMNSERKGKNVGKSESGSVSRTRTSPRLANKRG 240

[Close]

BLAST of Sed0002865 vs. NCBI nr
Match: XP_008455314.1 (PREDICTED: uncharacterized protein LOC103495510 [Cucumis melo] >KAA0031571.1 uncharacterized protein E6C27_scaffold139G003370 [Cucumis melo var. makuwa] >TYK07022.1 uncharacterized protein E5676_scaffold13G003380 [Cucumis melo var. makuwa])

HSP 1 Score: 319.7 bits (818), Expect = 2.1e-83
Identity = 178/239 (74.48%), Postives = 198/239 (82.85%), Query Frame = 0


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDHRIDPPAPVLDPFLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYYTDVKLND R+DPP PVLDP LSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNVEKLRSEREKIEKKKKKAEKVDSA-TRSDLDGGADDNRRSKKSKSVSPPPA 120
           RLQGRIEGNV KLR EREK+ KKK KAEK+DSA  RSD D GAD +R+ KK++SV+PPPA
Sbjct: 61  RLQGRIEGNVHKLRVEREKVAKKKLKAEKLDSAPKRSDPDAGADAHRQLKKARSVTPPPA 120

Query: 121 PVATKRRRLMPLFDDEEDFGEHQEEIGVVKRRLRLVKKLGDDFDRVAAGNRYQGSKG--- 180
           PVATKRRRLM LF+DE+D G  +EEIGVVKR  RLVKKLGDDFDRVAA ++    KG   
Sbjct: 121 PVATKRRRLMVLFEDEDDVGMDKEEIGVVKR--RLVKKLGDDFDRVAAESKRNQLKGLKD 180

Query: 181 -----NGISESVMKIVEEINDDNPKGKKINNERKGK---KVESGSVSVSRTSPRLANKR 228
                N ++ESVMKIVEEIN++N K K+IN E+KGK   KVES SVS +RTSPRLANKR
Sbjct: 181 RSSEINEVNESVMKIVEEINNENTKVKEINIEKKGKTVGKVESVSVSGTRTSPRLANKR 237

[Close]

BLAST of Sed0002865 vs. NCBI nr
Match: XP_022989501.1 (uncharacterized protein LOC111486558 [Cucurbita maxima])

HSP 1 Score: 307.4 bits (786), Expect = 1.1e-79
Identity = 171/239 (71.55%), Postives = 189/239 (79.08%), Query Frame = 0


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDHRIDPPAPVLDPFLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYYTDVK ND R+DPP PVLDPFLSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPFLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNVEKLRSEREKIEKKKKKAEKVDSATRSDLDGGADDNRRSKKSKSVSPPPAP 120
           RLQGRIEGNV KLR+EREKI KKK    KV++  RSD D   D  RRSKK KSVSPPP P
Sbjct: 61  RLQGRIEGNVNKLRTEREKIAKKK----KVETQERSDSDVRDDAVRRSKKLKSVSPPPVP 120

Query: 121 VATKRRRLMPLFD-DEEDFGEHQEEIGVVKRRLRLVKKLGDDFDRVAA--------GNRY 180
           +ATKRRRLMPLFD +++D GEH+EEI VVKR  RLVKKLGDDFDRVA         G+R 
Sbjct: 121 IATKRRRLMPLFDAEDDDVGEHKEEIRVVKR--RLVKKLGDDFDRVAVEGKKNQLKGSRD 180

Query: 181 QGSKGNGISESVMKIVEEINDDNPKGKKINNERKGKKVESGSVSVSRTSPRLANKRGLN 231
           +  + NGI ESVMKIVEEIND++ KGK       GKK+E+ S+S +RTSPRLANKR  N
Sbjct: 181 RNLEVNGIDESVMKIVEEINDESTKGKS-----SGKKLENDSISATRTSPRLANKRRSN 228

[Close]

BLAST of Sed0002865 vs. ExPASy TrEMBL
Match: A0A0A0K3S4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G048030 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.5e-84
Identity = 177/242 (73.14%), Postives = 199/242 (82.23%), Query Frame = 0


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDHRIDPPAPVLDPFLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYY+DVK ND R+DPP PVLDP LSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYSDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNVEKLRSEREKIEKKKKKAEKVDSA-TRSDLDGGADDNRRSKKSKSVSPPPA 120
           RLQGRIEGNV KLR+EREK+ KKK KA+K+DSA  RSD D GAD +R+ KK++SV+PPPA
Sbjct: 61  RLQGRIEGNVHKLRTEREKVAKKKLKAQKLDSAPKRSDPDAGADAHRQLKKARSVTPPPA 120

Query: 121 PVATKRRRLMPLFDDEEDFGEHQEEIGVVKRRLRLVKKLGDDFDRVAAGNRYQGSKG--- 180
           P+ATKRRRLM LF+DE+D G  +EEIGVVKR  RLVKKLGDDFDRVAA ++    KG   
Sbjct: 121 PIATKRRRLMVLFEDEDDIGMEKEEIGVVKR--RLVKKLGDDFDRVAAESKRSQLKGLKD 180

Query: 181 -----NGISESVMKIVEEINDDNPKGKKINNERKGK---KVESGSVSVSRTSPRLANKRG 231
                NG++ESVMKIVEEIN++N K KK N ERKGK    VES SVS SR+SPRLANKR 
Sbjct: 181 RSSEINGVNESVMKIVEEINNENTKVKKTNIERKGKTGGNVESVSVSGSRSSPRLANKRA 240

[Close]

BLAST of Sed0002865 vs. ExPASy TrEMBL
Match: A0A6J1D3X9 (uncharacterized protein LOC111016810 OS=Momordica charantia OX=3673 GN=LOC111016810 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 2.0e-84
Identity = 181/242 (74.79%), Postives = 199/242 (82.23%), Query Frame = 0


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDHRIDPPAPVLDPFLSWANEAHWSMGGLSFNRL 60
           MVV LGPGKFYGSSLPRPRYYTDVKLND R+DPP PVLDP L WANEAHWSMGGLSFNRL
Sbjct: 1   MVVALGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLLWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNVEKLRSEREKIEKKKKKAEKVDSATRSDLDGGADDNRRSKKSKSVSPPPAP 120
           RLQGRIEGN++KLR EREKI KKKKKAEK  ++ RSDLD GAD  RR  KSKSVSPPPAP
Sbjct: 61  RLQGRIEGNIDKLRVEREKIAKKKKKAEKDSASKRSDLDAGADVVRRLGKSKSVSPPPAP 120

Query: 121 VATKRRRLMPLFDDE-EDFGEHQEEIGVVKRRLRLVKKLGDDFDRVAAG--------NRY 180
           +ATKRRRL+ LFDDE +D GE++EEIGVVKR  RLVKKLGDDFDRVAA         +R 
Sbjct: 121 IATKRRRLIALFDDEDDDGGEYKEEIGVVKR--RLVKKLGDDFDRVAAESKRNQLKYSRD 180

Query: 181 QGSKGNGISESVMKIVEEINDDNPKGKKINNERKGKKV---ESGSVSVSRTSPRLANKRG 231
           + S  +GI ESVMKIVEEIN  + +GKK+N+ERKGK V   ESGSVS +RTSPRLANKRG
Sbjct: 181 RISPVDGIGESVMKIVEEINGADTEGKKMNSERKGKNVGKSESGSVSRTRTSPRLANKRG 240

[Close]

BLAST of Sed0002865 vs. ExPASy TrEMBL
Match: A0A5A7SPW2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003380 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 1.0e-83
Identity = 178/239 (74.48%), Postives = 198/239 (82.85%), Query Frame = 0


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDHRIDPPAPVLDPFLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYYTDVKLND R+DPP PVLDP LSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNVEKLRSEREKIEKKKKKAEKVDSA-TRSDLDGGADDNRRSKKSKSVSPPPA 120
           RLQGRIEGNV KLR EREK+ KKK KAEK+DSA  RSD D GAD +R+ KK++SV+PPPA
Sbjct: 61  RLQGRIEGNVHKLRVEREKVAKKKLKAEKLDSAPKRSDPDAGADAHRQLKKARSVTPPPA 120

Query: 121 PVATKRRRLMPLFDDEEDFGEHQEEIGVVKRRLRLVKKLGDDFDRVAAGNRYQGSKG--- 180
           PVATKRRRLM LF+DE+D G  +EEIGVVKR  RLVKKLGDDFDRVAA ++    KG   
Sbjct: 121 PVATKRRRLMVLFEDEDDVGMDKEEIGVVKR--RLVKKLGDDFDRVAAESKRNQLKGLKD 180

Query: 181 -----NGISESVMKIVEEINDDNPKGKKINNERKGK---KVESGSVSVSRTSPRLANKR 228
                N ++ESVMKIVEEIN++N K K+IN E+KGK   KVES SVS +RTSPRLANKR
Sbjct: 181 RSSEINEVNESVMKIVEEINNENTKVKEINIEKKGKTVGKVESVSVSGTRTSPRLANKR 237

[Close]

BLAST of Sed0002865 vs. ExPASy TrEMBL
Match: A0A1S3C0M4 (uncharacterized protein LOC103495510 OS=Cucumis melo OX=3656 GN=LOC103495510 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 1.0e-83
Identity = 178/239 (74.48%), Postives = 198/239 (82.85%), Query Frame = 0


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDHRIDPPAPVLDPFLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYYTDVKLND R+DPP PVLDP LSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNVEKLRSEREKIEKKKKKAEKVDSA-TRSDLDGGADDNRRSKKSKSVSPPPA 120
           RLQGRIEGNV KLR EREK+ KKK KAEK+DSA  RSD D GAD +R+ KK++SV+PPPA
Sbjct: 61  RLQGRIEGNVHKLRVEREKVAKKKLKAEKLDSAPKRSDPDAGADAHRQLKKARSVTPPPA 120

Query: 121 PVATKRRRLMPLFDDEEDFGEHQEEIGVVKRRLRLVKKLGDDFDRVAAGNRYQGSKG--- 180
           PVATKRRRLM LF+DE+D G  +EEIGVVKR  RLVKKLGDDFDRVAA ++    KG   
Sbjct: 121 PVATKRRRLMVLFEDEDDVGMDKEEIGVVKR--RLVKKLGDDFDRVAAESKRNQLKGLKD 180

Query: 181 -----NGISESVMKIVEEINDDNPKGKKINNERKGK---KVESGSVSVSRTSPRLANKR 228
                N ++ESVMKIVEEIN++N K K+IN E+KGK   KVES SVS +RTSPRLANKR
Sbjct: 181 RSSEINEVNESVMKIVEEINNENTKVKEINIEKKGKTVGKVESVSVSGTRTSPRLANKR 237

[Close]

BLAST of Sed0002865 vs. ExPASy TrEMBL
Match: A0A6J1JK90 (uncharacterized protein LOC111486558 OS=Cucurbita maxima OX=3661 GN=LOC111486558 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 5.1e-80
Identity = 171/239 (71.55%), Postives = 189/239 (79.08%), Query Frame = 0


Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDHRIDPPAPVLDPFLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYYTDVK ND R+DPP PVLDPFLSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYTDVKFNDERVDPPTPVLDPFLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNVEKLRSEREKIEKKKKKAEKVDSATRSDLDGGADDNRRSKKSKSVSPPPAP 120
           RLQGRIEGNV KLR+EREKI KKK    KV++  RSD D   D  RRSKK KSVSPPP P
Sbjct: 61  RLQGRIEGNVNKLRTEREKIAKKK----KVETQERSDSDVRDDAVRRSKKLKSVSPPPVP 120

Query: 121 VATKRRRLMPLFD-DEEDFGEHQEEIGVVKRRLRLVKKLGDDFDRVAA--------GNRY 180
           +ATKRRRLMPLFD +++D GEH+EEI VVKR  RLVKKLGDDFDRVA         G+R 
Sbjct: 121 IATKRRRLMPLFDAEDDDVGEHKEEIRVVKR--RLVKKLGDDFDRVAVEGKKNQLKGSRD 180

Query: 181 QGSKGNGISESVMKIVEEINDDNPKGKKINNERKGKKVESGSVSVSRTSPRLANKRGLN 231
           +  + NGI ESVMKIVEEIND++ KGK       GKK+E+ S+S +RTSPRLANKR  N
Sbjct: 181 RNLEVNGIDESVMKIVEEINDESTKGKS-----SGKKLENDSISATRTSPRLANKRRSN 228

[Close]

BLAST of Sed0002865 vs. TAIR 10
Match: AT4G28310.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 157.9 bits (398), Expect = 9.7e-39
Identity = 103/228 (45.18%), Postives = 134/228 (58.77%), Query Frame = 0


Query: 3   VPLGPGKFYGSSLPRPRYYTDVKLNDHRIDPPAPVLDPFLSWANEAHWSMGGLSFNRLRL 62
           + + P  FYG+ LPRPR++ + K ND+R+DPP  VLDP LSWA +AHWSMGGL+F RLRL
Sbjct: 9   IAIRPVSFYGNGLPRPRFFDNPKFNDYRVDPPLSVLDPLLSWARDAHWSMGGLNFTRLRL 68

Query: 63  QGRIEGNVEKLRSEREKIEKKKKKAEKVDSATRSDLDGGADDNRRSKKSKSVSPPPAPVA 122
           QGRIEGNV KLR++ EK             +T   L+ G    R+ K+S S SPP AP+ 
Sbjct: 69  QGRIEGNVNKLRAQLEK-------------STPVKLESG----RKKKRSGSESPPSAPIV 128

Query: 123 TKRRRLMPLFD-DEEDFGEHQEEIGVVKRRLRLVKKLGDDFDRVAAGNRYQGSKGNGISE 182
            KRRR + L D D+E+ G   E  GVV    R+ +KL DDFDRVA              E
Sbjct: 129 VKRRRYLDLNDSDDEEVGSEDE--GVV----RIRRKLSDDFDRVA-------------EE 188

Query: 183 SVMKIVEEINDDNPKGKKINNER---KGKKVESGSVSVSRTSPRLANK 227
           S  K+V E N  + K + +  +R   K K V+    S +R+SPRLA +
Sbjct: 189 SKTKLV-EANKKSIKSEFVEKKRLIEKKKIVKVNKTSSTRSSPRLAKR 199

[Close]

BLAST of Sed0002865 vs. TAIR 10
Match: AT1G52270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28310.1); Has 29 Blast hits to 28 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 9.7e-07
Identity = 20/39 (51.28%), Postives = 27/39 (69.23%), Query Frame = 0


Query: 7  PGKFYGSSLPRPRYYTDVKLNDHRIDPPAPVLDPFLSWA 46
          P  FY + LPRPR++ + + N +R+D P  VLDP LSWA
Sbjct: 13 PVAFYRNGLPRPRFFDNHRFNSYRVDTPLSVLDPLLSWA 51

The following BLAST results are available for this feature:

BLAST of Sed0002865 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888811.1	1.9e-84	73.66	uncharacterized protein LOC120078599 [Benincasa hispida]	[more]
XP_004136827.1	3.2e-84	73.14	uncharacterized protein LOC101207471 [Cucumis sativus] >KGN43619.1 hypothetical ...	[more]
XP_022148022.1	4.1e-84	74.79	uncharacterized protein LOC111016810 [Momordica charantia]	[more]
XP_008455314.1	2.1e-83	74.48	PREDICTED: uncharacterized protein LOC103495510 [Cucumis melo] >KAA0031571.1 unc...	[more]
XP_022989501.1	1.1e-79	71.55	uncharacterized protein LOC111486558 [Cucurbita maxima]	[more]

BLAST of Sed0002865 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0002865 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3S4	1.5e-84	73.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G048030 PE=4 SV=1	[more]
A0A6J1D3X9	2.0e-84	74.79	uncharacterized protein LOC111016810 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A5A7SPW2	1.0e-83	74.48	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C0M4	1.0e-83	74.48	uncharacterized protein LOC103495510 OS=Cucumis melo OX=3656 GN=LOC103495510 PE=...	[more]
A0A6J1JK90	5.1e-80	71.55	uncharacterized protein LOC111486558 OS=Cucurbita maxima OX=3661 GN=LOC111486558...	[more]

BLAST of Sed0002865 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28310.1	9.7e-39	45.18	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G52270.1	9.7e-07	51.28	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 63..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..230
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..211
None	No IPR available	PANTHER	PTHR35103	OS06G0115700 PROTEIN	coord: 1..227

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002865.1	Sed0002865.1	mRNA