Sed0002780 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTTTAGTTTTTGCGTTCAATTTACGCTCATTGTTCATCTTCCTCGTCCGGATCTGCCGCTTTCAACTTCATCTTTCTCTCTGTAATTTCCTTCAAACACCATGAGAAAAGGAGCTAAGAGAAAAGCTGTGAAGAAGGAAGAGGCTGAGTCTGTGGGGAAGGAGAACCGCAAAGAATCCACCACCGTCAATGCGCCAACTCGAGCCAAGCGAGTCAAGGCTTCCAAGCCTGATTCCTCACCGGAATACTTCGAGGACAAGCGAAATTTGGTAACCCTTTTAAGATTTATTGTTTTCACTCTGAATTATGTATTTTGCATTTCAATTCATTGGTGTTTGATCCTGATCTGGAGTTTTTTTTTTTTTTTTTTTTGGTATTGGAATGGATGAATGTTTGTTTCGAGTATAAATTAGTTGAGCAGATTGAGCATTCAGCATTGTAGATACTAGTCCGGAATTTGCCTCTGTTTAAAGTGATTCGATGTGTTATTCGTCAGGGGTGTTAAAAAAACTGGACAAGGGTCCTAAGGGATGACACGGTGGTCGAAAGCTAGGTGCGCTTCTCTTAAGGTCTTAGGTTCGAGATCGAGACTCACCTCTGACATAAATTTATAGAAACCTTCTTAGTCTCCATTTCTTTAATATCTCCCGGTGCGAGGCCTAGAGATGGGCCTGGCTACCTTGGGTATAGTGGAGCAATACTCTAATTTTTCGATTTTCAAAAACAAAAAACCGGAAAAGCAACTCAAATTAATGGGTTGGATTGTGTTATCAACTTGAGTTGTGTGGGGTTCAACTTGAGTTGTGTGGGGTTCAACTTGAGTTGTGTGGGGTTCAAATGAATGAAACGTTAATGAGTTGGATTGATTCATGGATTAGCCTAGGATTAGTTTGTATTGATCCATGGATTAGCCTAAGATTAGTTTGGATTGATCTTAGCACATATATTTATTTTAACATTTTACTTTGAAAAAAATATTTGGGTTGATTCTAAAAAAAATGTATCAACCCTACCTAAATCAACGCATATATCCCCTTGTAGAAATTATCAGGTTGTTTTGTACAAAAATTGATAGTAAATAAGAAATACATATTCGAAGTTATAAAAAAACAAATCGATTACCCAAATTATATAGCTTAGGGTGAGTTGCTCTAGGGTTGGATGAGTTGGTAGTTTGATCAAACCGAAAATTTGTGTTGGTTTGAAAAGATTCTGACCGAACCCATGTAGGATAATGTCTGATCAAGCTTACCTATTTGACTTATGCAGGAAGATTTATGGAAGGCAGCATTCCCCGTGGGAACAGAGGTTTGTATCTTATTTGCAATGTGGTATATTTGTTCTTTTTTGGGTATGCAATATAATCTCAATGGTTCTATAACTTCAGTGGGACCAACTGGATTCTGTTTACCAGTACAACTGGAATTTCTCAAATCTTGAGGTGAGTTTTATAGTTTTGATTTATTTTCAATTTCACCCCACTAATTTTCTTTGAGTATGATGTTGGATGTGCCATTTACAACAATTTGAAGTAAAGTTCTCATAATGAACAGGATGCATTTGAAGAAGGGGGAAAACTGTACGGGGAGAAAGTTTATCTATTTGGTTCTACAGAGCGTAAGCAATTGAAAGCTTGAGTTCCCTTTTATTTTCCATCTTTGAGAGACTCTGAAAACTCAACTCAAGACAACTTGTTTTTCATGACTTTCTTTCATTACAGCACAACTTGTTCCTTTCAATGGCGAAAGTAAAGTTATTTGCATTCCTGTAGTGGTGGCTGTAAGTTGTTCATAATATATGTTTTTGTTTTTTCAATTCTCCATGATAAAAATATTTGTTTTACTTGGTCTTATAGTAAATTAACATGGGCTTACTTTTCTGTATTATGGTTACCTTGTGTTTCTTTTCCTTGAGAAACGTGTTGATGATGCCATATTGAAAAATTGAGGAGACTTCCTAGCATTTGTAAGACAGATGGATTACTCCATTCATCACCAATTAGTTTTGAGTTAAAAGTTCATACTATCTAATATGGTATCAAAGTCTATTAAACCCAAATTGATATTTTGTCCATTAAAATAAAATTGGGATCCATCCCAAGATTGATAGCCTAGCATGTCTTTTTTTATATCCGTGACTGTCCTGGCCAGCTAGCGCGCACCTCGACTGATGTCTCGGGACATACCGCCTGACCTTACAACATTTGGATGTCAAGGAAACCTGTAGGAAATTAATTTCTTGATAGGTGGCCACCATGGATTGAATCCAACACCTTAAGCACTCCAAGACCCTCTTTGACCACTAGACCATTTCATGATGGTTTAAAAGCCTATTAAACCCAAACTTGTATTCTTTCTAGTAAAATAAAATTGGGATCCGATCCAAGATTAATTAGCTCAAAGTGGCACCATCATGAGAATGCATGTTGAGGATCCCACGTTGAAAAGGTAAGTAGACCTCTTATCATTTATAAAATAAGATGGCCTACTTCATTCAATCACTAATTGATTTCGAGATGAACCCCAACCATATAATAAAACACTACTATTAGATTTTAAACCGTTAGTTTTATGTTCGAGTAATTGTTTACGATTGATTGATTTTTATGCTCTATAGGTAGTCTCACCTTTCCCACCTTCTGATAAAATTGGGATCAACTCTGTTCAACGAGAGGCTGAAGAGATTATACCCATGAAACAGATGAAAATGGGTTGGGTTCCGTATATTCCTCTTGAGAACAGGTACCAACTGCCTATGAATTTCTTTGTGATTGGATACCTTTGGGGTTCCTTCATAACTTTTATTTAATGGCTTAAAGAAACTATTGACAGGGATAGCCGAGTTGATAAGCTGAAATCTCAAATATTTATTCTAAGTTGCACCCAACGAAGGTAAATGGTTTTACTTCTGACTATCTTCTTCCATCACATAGCTAGCCCTCTCGAAAGAATGAGAAAATAGTGATTAAAAAAGAAGAAGGAAAGTCAATATTACCAAGAATAGTAGTATATAAATCCTTGTTAAGGGACGACAAACTCTCGAGGAATCTCTATATTGGTATGATATTGTCCACTTTAGGCATAAGACCTCATGACTTTGTTTTTGGTTTCAATCAAAACACCTCATACCAATCGAGATGTTTATCCTTTCTTATAAACTCATGATCTACCCCTTATTTAACCAATGTGAGATTACACACTTTTGTATTCCCATAACAATCCTAATTCTCAATCATATGTTGAACTAATTGGTTCCCCTAGTAAATAAAGCAGATACACAATTTCAATTGCCGGATTGCATTTGCTTCTTCAATTTGCTGGAGTAATACCGACTTTTAATTTCGTGTTCTAATTTATGTTGATTGATGCTCATTATAGGGCTGCTCTGAAGCATTTGAAGATAGATCGTGTCAAGAAATATGAATACTGCTTGCCTTGTGAGTTATTCAGCTTTTTCATGTCGAGAGTTTGCATATGAGTAGAACTTGCTTGATCCTGCTAGAAGGGAAAAGTAGTTCCATTTACTTCTGTGAGGAGGGGGTCTGATTATGTGAACTGGGCTAAACCAGCTAGCTCAGGACTTGAATTGTTGATATTATTTGGTTCTTCAGAGCACTCTAGCTTGCTTGTCATAATGAACAAATACCTATTCTTTTGACAGATATCTACCAGCCCTTAAAGGAAGATGAGTTGGAGCAAAGCACCGAGGTCCAAATAATATTTCCGGCCGAAGCAAAGCCAGTAAGATTTTCGTATGTGATATAGTGGGGAGAAAAATAATTATTGTGATTGCTCGGGTTCGAGACTCACCTGTGACATTACTTCGATATCTCTAGTGTCTGGCCTAGGGACGGACATCGTTACCTTGTGTCAAAAAAAAATAAAAATTATTGCGATTGTTTAGAGAGAAGATGAAGCACAAACTTAAGTTAGTGTGATGCTGTTCATTTTAGTGATGACTTTCTTCAAATGATTAAACTGAGTCTCGGCCTTTGCATAATATATTATATATATATTAGACGTCCTTTGCTAATTTAAACCTTTTTGTTGGGTGCTGCAGATTTTCTGTGAATTTGATTGGGAACTAGATGAACTTCAGGTACTAGAATTGCCCTTCTGATTTTTTTTAGTTTTGGAGCATTCTTGCAGACTTATTCTTAGCTCTTCCCGCTCTTTTTCGAATACAATATTTGAAGATGGCTGAAGTTTTTCCACGAACTTCTCAAAAATTTTTTAGGAGTTCACAGATAAGCTGATCGAAGAGGAGGAATTGTCTGAAGATCAGAAAGATGCATTCAAGGTAGTTTTTTATGGGAAAAGAATACACTCCCCCATTTAAGTTTTGGGCCCTATGACTAAATGATAATATTTGAGTACTCTCTTCCTTAGGAGTTTGTGAAGGAAAAAGTTAGAGAAGCAAAGAAAGCTAATCGAGAGGCAAGTTATTATGAATATTCCTTTTTAGTTCTCTTTTATTTATTCAATATTTATTTGCAACTCTTTTAATGGAGTTTTGGTGGTTGTATATCTTATAGGCAAGAGAAGCACGTAAAAAAATGCTCCAAGAAATGAGCGAGGAAACAAAGGCAGCATTTGAGAAAATGAGGTTTTATAAGTTCTACCCAGTTCAAACACAACATAGCCCTGATATTTCCAACGTTAAGGTAAAAAATTCACACTTGTGTTATAAGAAAATGAGGTTTTATAAGTTCTACCCAGTTCAAACACTTTTCTTCTTCCAGCTGTTTGGCACACTTGGAACCTGTTTGGCATAACTCTTGAAGGCTTAAAAATACTTTTCTAGCGACCATCATGGATTATTCTTGTAGTTCAAAGAGGGTCTTGGAGATTTAAGGAAATTACGAGTTTAATCTATAGTCACCACCTACCTAAAAGATAATTTACTACGGATTTTCTTGACATCTAAATGTTGTAGGATCACCAGTATGTCATGTGAGAATAATCGAGGTACGCGTAAGCTGATATGGATCTCACATTTCTAAACCTTAAAACCCCGTTTTAGGCATGCTGGAGAGTCATTCCAACCATGACCCTAGTGTGATAAATCTTTATCTGAAATGTTGACAGTAACTAAGAAATTGCTGTCAAGCCGTTGTGTTAATTCCATTGTTCATCTGGTGTTGCTTTCAGGCTCCATTCATAAACAGGTATTATGGAAAGGCTCATGAAATTTTATGATTCGTGGACTTGGAAAGAAAGAAGTTTCTTATTTGGTTCAATGGTCATCCAACCAGTGATCCAAAATGTTCAAGGAGTGCTTAGTTCTCATAAGAACTCTTGGAGGGAAGTCCCACGCCCGCCCGTCTTGCACATTTCTCGATCGAGGATGTTAAATCTTGCATCAGAACTTTTAAGATTAGAAACATGCACCTTTTTTTCCCTCCCAGTCATAAGGAATGTGTAAAACTGAATTTGTACTCCCCAGTTTCTTACTTTTGTTATTGACTAGAGAGATGGGGAAACCCCCTAAAATGTTACCAGTTTTTGACAATTGGATCTCACTTAACTTATAGAAACATTAAAGTTCTAATGTTACATTTGATTATCATTGGCTTA GTTTTAGTTTTTGCGTTCAATTTACGCTCATTGTTCATCTTCCTCGTCCGGATCTGCCGCTTTCAACTTCATCTTTCTCTCTGTAATTTCCTTCAAACACCATGAGAAAAGGAGCTAAGAGAAAAGCTGTGAAGAAGGAAGAGGCTGAGTCTGTGGGGAAGGAGAACCGCAAAGAATCCACCACCGTCAATGCGCCAACTCGAGCCAAGCGAGTCAAGGCTTCCAAGCCTGATTCCTCACCGGAATACTTCGAGGACAAGCGAAATTTGGAAGATTTATGGAAGGCAGCATTCCCCGTGGGAACAGAGTGGGACCAACTGGATTCTGTTTACCAGTACAACTGGAATTTCTCAAATCTTGAGGATGCATTTGAAGAAGGGGGAAAACTGTACGGGGAGAAAGTTTATCTATTTGGTTCTACAGAGCCACAACTTGTTCCTTTCAATGGCGAAAGTAAAGTTATTTGCATTCCTGTAGTGGTGGCTGTAGTCTCACCTTTCCCACCTTCTGATAAAATTGGGATCAACTCTGTTCAACGAGAGGCTGAAGAGATTATACCCATGAAACAGATGAAAATGGGTTGGGTTCCGTATATTCCTCTTGAGAACAGGGATAGCCGAGTTGATAAGCTGAAATCTCAAATATTTATTCTAAGTTGCACCCAACGAAGGGCTGCTCTGAAGCATTTGAAGATAGATCGTGTCAAGAAATATGAATACTGCTTGCCTTATATCTACCAGCCCTTAAAGGAAGATGAGTTGGAGCAAAGCACCGAGGTCCAAATAATATTTCCGGCCGAAGCAAAGCCAATTTTCTGTGAATTTGATTGGGAACTAGATGAACTTCAGGAGTTCACAGATAAGCTGATCGAAGAGGAGGAATTGTCTGAAGATCAGAAAGATGCATTCAAGGAGTTTGTGAAGGAAAAAGTTAGAGAAGCAAAGAAAGCTAATCGAGAGGCAAGAGAAGCACGTAAAAAAATGCTCCAAGAAATGAGCGAGGAAACAAAGGCAGCATTTGAGAAAATGAGGTTTTATAAGTTCTACCCAGTTCAAACACAACATAGCCCTGATATTTCCAACGTTAAGGCTCCATTCATAAACAGGTATTATGGAAAGGCTCATGAAATTTTATGATTCGTGGACTTGGAAAGAAAGAAGTTTCTTATTTGGTTCAATGGTCATCCAACCAGTGATCCAAAATGTTCAAGGAGTGCTTAGTTCTCATAAGAACTCTTGGAGGGAAGTCCCACGCCCGCCCGTCTTGCACATTTCTCGATCGAGGATGTTAAATCTTGCATCAGAACTTTTAAGATTAGAAACATGCACCTTTTTTTCCCTCCCAGTCATAAGGAATGTGTAAAACTGAATTTGTACTCCCCAGTTTCTTACTTTTGTTATTGACTAGAGAGATGGGGAAACCCCCTAAAATGTTACCAGTTTTTGACAATTGGATCTCACTTAACTTATAGAAACATTAAAGTTCTAATGTTACATTTGATTATCATTGGCTTA ATGAGAAAAGGAGCTAAGAGAAAAGCTGTGAAGAAGGAAGAGGCTGAGTCTGTGGGGAAGGAGAACCGCAAAGAATCCACCACCGTCAATGCGCCAACTCGAGCCAAGCGAGTCAAGGCTTCCAAGCCTGATTCCTCACCGGAATACTTCGAGGACAAGCGAAATTTGGAAGATTTATGGAAGGCAGCATTCCCCGTGGGAACAGAGTGGGACCAACTGGATTCTGTTTACCAGTACAACTGGAATTTCTCAAATCTTGAGGATGCATTTGAAGAAGGGGGAAAACTGTACGGGGAGAAAGTTTATCTATTTGGTTCTACAGAGCCACAACTTGTTCCTTTCAATGGCGAAAGTAAAGTTATTTGCATTCCTGTAGTGGTGGCTGTAGTCTCACCTTTCCCACCTTCTGATAAAATTGGGATCAACTCTGTTCAACGAGAGGCTGAAGAGATTATACCCATGAAACAGATGAAAATGGGTTGGGTTCCGTATATTCCTCTTGAGAACAGGGATAGCCGAGTTGATAAGCTGAAATCTCAAATATTTATTCTAAGTTGCACCCAACGAAGGGCTGCTCTGAAGCATTTGAAGATAGATCGTGTCAAGAAATATGAATACTGCTTGCCTTATATCTACCAGCCCTTAAAGGAAGATGAGTTGGAGCAAAGCACCGAGGTCCAAATAATATTTCCGGCCGAAGCAAAGCCAATTTTCTGTGAATTTGATTGGGAACTAGATGAACTTCAGGAGTTCACAGATAAGCTGATCGAAGAGGAGGAATTGTCTGAAGATCAGAAAGATGCATTCAAGGAGTTTGTGAAGGAAAAAGTTAGAGAAGCAAAGAAAGCTAATCGAGAGGCAAGAGAAGCACGTAAAAAAATGCTCCAAGAAATGAGCGAGGAAACAAAGGCAGCATTTGAGAAAATGAGGTTTTATAAGTTCTACCCAGTTCAAACACAACATAGCCCTGATATTTCCAACGTTAAGGCTCCATTCATAAACAGGTATTATGGAAAGGCTCATGAAATTTTATGA MRKGAKRKAVKKEEAESVGKENRKESTTVNAPTRAKRVKASKPDSSPEYFEDKRNLEDLWKAAFPVGTEWDQLDSVYQYNWNFSNLEDAFEEGGKLYGEKVYLFGSTEPQLVPFNGESKVICIPVVVAVVSPFPPSDKIGINSVQREAEEIIPMKQMKMGWVPYIPLENRDSRVDKLKSQIFILSCTQRRAALKHLKIDRVKKYEYCLPYIYQPLKEDELEQSTEVQIIFPAEAKPIFCEFDWELDELQEFTDKLIEEEELSEDQKDAFKEFVKEKVREAKKANREAREARKKMLQEMSEETKAAFEKMRFYKFYPVQTQHSPDISNVKAPFINRYYGKAHEIL Homology
BLAST of Sed0002780 vs. NCBI nr
Match: XP_022133379.1 (uncharacterized protein LOC111005966 [Momordica charantia]) HSP 1 Score: 629.4 bits (1622), Expect = 1.8e-176 Identity = 322/344 (93.60%), Postives = 328/344 (95.35%), Query Frame = 0
BLAST of Sed0002780 vs. NCBI nr
Match: XP_042976647.1 (protein HEAT INTOLERANT 4-like [Carya illinoinensis] >KAG2711763.1 hypothetical protein I3760_04G091700 [Carya illinoinensis] >KAG6657461.1 hypothetical protein CIPAW_04G092700 [Carya illinoinensis] >KAG6717295.1 hypothetical protein I3842_04G091500 [Carya illinoinensis] >KAG7983062.1 hypothetical protein I3843_04G085300 [Carya illinoinensis]) HSP 1 Score: 577.8 bits (1488), Expect = 6.3e-161 Identity = 295/344 (85.76%), Postives = 315/344 (91.57%), Query Frame = 0
BLAST of Sed0002780 vs. NCBI nr
Match: KAF3440453.1 (hypothetical protein FNV43_RR18737 [Rhamnella rubrinervis]) HSP 1 Score: 575.5 bits (1482), Expect = 3.1e-160 Identity = 295/345 (85.51%), Postives = 313/345 (90.72%), Query Frame = 0
BLAST of Sed0002780 vs. NCBI nr
Match: XP_022136810.1 (uncharacterized protein LOC111008415 [Momordica charantia]) HSP 1 Score: 573.5 bits (1477), Expect = 1.2e-159 Identity = 291/344 (84.59%), Postives = 311/344 (90.41%), Query Frame = 0
BLAST of Sed0002780 vs. NCBI nr
Match: KAE7998173.1 (hypothetical protein FH972_002744 [Carpinus fangiana]) HSP 1 Score: 573.2 bits (1476), Expect = 1.5e-159 Identity = 289/344 (84.01%), Postives = 315/344 (91.57%), Query Frame = 0
BLAST of Sed0002780 vs. ExPASy Swiss-Prot
Match: A2RVJ8 (Protein HEAT INTOLERANT 4 OS=Arabidopsis thaliana OX=3702 GN=HIT4 PE=1 SV=1) HSP 1 Score: 456.8 bits (1174), Expect = 2.1e-127 Identity = 224/343 (65.31%), Postives = 280/343 (81.63%), Query Frame = 0
BLAST of Sed0002780 vs. ExPASy TrEMBL
Match: A0A6J1BVU0 (uncharacterized protein LOC111005966 OS=Momordica charantia OX=3673 GN=LOC111005966 PE=4 SV=1) HSP 1 Score: 629.4 bits (1622), Expect = 8.8e-177 Identity = 322/344 (93.60%), Postives = 328/344 (95.35%), Query Frame = 0
BLAST of Sed0002780 vs. ExPASy TrEMBL
Match: A0A6J1C502 (uncharacterized protein LOC111008415 OS=Momordica charantia OX=3673 GN=LOC111008415 PE=4 SV=1) HSP 1 Score: 573.5 bits (1477), Expect = 5.7e-160 Identity = 291/344 (84.59%), Postives = 311/344 (90.41%), Query Frame = 0
BLAST of Sed0002780 vs. ExPASy TrEMBL
Match: A0A5N6QIW9 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_002744 PE=4 SV=1) HSP 1 Score: 573.2 bits (1476), Expect = 7.5e-160 Identity = 289/344 (84.01%), Postives = 315/344 (91.57%), Query Frame = 0
BLAST of Sed0002780 vs. ExPASy TrEMBL
Match: A0A2I4H1V7 (protein HEAT INTOLERANT 4-like isoform X1 OS=Juglans regia OX=51240 GN=LOC109012774 PE=4 SV=1) HSP 1 Score: 572.8 bits (1475), Expect = 9.8e-160 Identity = 291/344 (84.59%), Postives = 315/344 (91.57%), Query Frame = 0
BLAST of Sed0002780 vs. ExPASy TrEMBL
Match: A0A2I4FW82 (protein HEAT INTOLERANT 4-like OS=Juglans regia OX=51240 GN=LOC109002555 PE=4 SV=1) HSP 1 Score: 571.2 bits (1471), Expect = 2.8e-159 Identity = 295/344 (85.76%), Postives = 313/344 (90.99%), Query Frame = 0
BLAST of Sed0002780 vs. TAIR 10
Match: AT5G10010.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64910.1); Has 33260 Blast hits to 16857 proteins in 1270 species: Archae - 88; Bacteria - 3040; Metazoa - 11915; Fungi - 3137; Plants - 1371; Viruses - 424; Other Eukaryotes - 13285 (source: NCBI BLink). ) HSP 1 Score: 456.8 bits (1174), Expect = 1.5e-128 Identity = 224/343 (65.31%), Postives = 280/343 (81.63%), Query Frame = 0
BLAST of Sed0002780 vs. TAIR 10
Match: AT5G64910.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 328.9 bits (842), Expect = 4.7e-90 Identity = 181/329 (55.02%), Postives = 232/329 (70.52%), Query Frame = 0
BLAST of Sed0002780 vs. TAIR 10
Match: AT5G64910.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10010.1). ) HSP 1 Score: 322.4 bits (825), Expect = 4.4e-88 Identity = 180/329 (54.71%), Postives = 231/329 (70.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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