Sed0002775 (gene) Chayote v1

Overview


Name	Sed0002775
Type	gene
Organism	Sechium edule (Chayote v1)
Description	elongation factor P
Location	LG02: 31353184 .. 31366388 (+)
RNA-Seq Expression	Sed0002775
Synteny	Sed0002775

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGTGATAAAGTTGACAAAAACCTCATAGCTGAAGCGCCTAAAAGAAAGGAGGAGTTAGACGGGGGTACTATAAAAAAGGAGTCCTTATCCCCACATTCATTTGCTGTCATTCTGCGCAACACACAAACATGGCTGCTAACATTGTTTCCTGTTGTAATGCCTCCTTCGCTTCTGCTTTTATCGCCCCCTCAACCAATTTGTCTTTCAAGCCCTCCCTTCTCCCAATCCCGCGTTTGCGAACTGGGTTTTCGAGTAACCCCCCCTTCGATTCTCACATTGCAATTCCTCATTTCCCAATCTCCCCATTCTAACTTCTTGTTGCATTTTTCAGGGATTTACGCGTTTACCAGCAACGACATCAAAGTTGGCTCCAATATTGAAGTCGATGGAGCTCCTTGGCGCGTATTAGGTTCTTCTTTTTTATTTTGATTCTTTAACCATCATCGAATGGAGGGCCTTGAGCTTATTGCTGCCCACCCAACTAATCGTTAATTTCCTACGAACTTTCTCCACATTCAAATGTTGTAGGGGCTGTATGTACACCGACATTATAGTCGAGAGGTGCGCGCAAGTGGGCCTGAACAATTATATATATTAAGAAACAACTAAATAAAATTATGATTGTTCAAGTGAAGTGACCCCCTTTTTTGTGGATAGAGTTCCTTCATGTCAAACCCGGTAAAGGAGCAGCTTTTGTTAGGACCAAAATGCGTAATTATGTTACAGGCAATACGGTCGAGAAAACGTTTCGAGCAGGAAGCTCGGTGAGTACCAAAATTATTATCACCTCATGTATGCTACACTTTGTACCTCGTACTGATTTCGAACACAACATCAAATCACAACCTTGGTTTTGGAACATATCATCATCATCATTATCATCCTTGGTTAATCAAAACATCTATCTATTATTTATTATTTATGTATAATTGTCTTTCCAGCTTGATGAGGCCAATGTATACAAGGAAGTCAAGCAGTTCACTTACAAAGACGGTTCCCAGTTTGTTTTCATGGATCTGGTATATGTTGTTATGATTTGGTTGATATTGGCACCTTTCTTATAATTCACTAAGAATTTCTCTCTAGATGACTTCATATGTAATGTAGGGTAGCTCTGAATGGATTTTAGTTTGCTAGTTCTCAACTGCATCAAATGAGTCTAAGTGGCTCTTTTTACAGAATACATATGAAGAAATACGCCTAAATGAAAAAGACGTTGGTGATAGGACAAAGTGGCTGAAAGAAGGAATGGACTGCATCGTATTGTTTTGGAATGGGAAGGTAAATTCGGTCGCTTTTGAGCAGCTTTTGATTTGATAGCCACTTTTTACTATGTTTCCAATACGAGTTCATCATGCTGTTCTTATAAACTTCACTTCATGACTCACTCTTGAGAAATACAATTAAGATTTAGTAGCTTTCCTATGTCTTGATGAATGAGTCACATGTCATGAATTTTATTTATTTATTTTGATAAGAAACATTAACTTTCATTGAAAAATGATGATTTTGCTTTCAGTTTTTACAAAGTGTCAGTGGCATCAGATAAAAAGAAGTGAAATATAATTTTTGAGTTTCTTTGTTCTCCCATCTTGTAGGTTATTGATTTTGAGGTTCCCATCACAATTCAATTGGCTGTGGTTGACGTTGATCCTGGATTGAAAGGGGACACGGCACAAGGTACCATACCTCTACTTGACCTATACTCTGCTTTGTTAACGGTTTGTAGACAGATGAGGTTATTTGAATAGAAATGGGCTAAATTTTCTTGCCAATGACTAACAAATTTCAGCGGGATTAGGTTATTGTACAAAGATAATATTTTAATACCAAGGGGTGGCGGAGTGGTTGAAGACTTGGGTTTTGAAGGTGTGTTCCCCTCAAGGTCCAAAGTTCGAAACTCACTTGCGACAGTAATTTGTAGACACCTCCCATTTGTCCATTCATTTGATGTCTCTCAATGCCTGGCTTGGGGACGGGCATGGTTACCCTTGCTTACAAAAAACCATTATATTAGTATAGCTCGATTGGCATTACGTATGAACCTTTGACTAAGGCCAAAGTGAGTATAGCTCATTTGGCATAAAGTATGTACCTTCGACTAAGGCCAAAGTGAATATAGCTTGATTGGCATAAAGTAAGCTATGTACATTGGACTTAGGCCAAAGTGAGTGCATCCTTTGAAGTCGGAGTTGAAATCCCCCTACCTCATTTGTTGTACTAAAACATGTATCCTCCACTCAGAGATCTTGCTTTTTGTGCAATCTAAATGCCGCTTTGATACCAATTTGTGGAAACTCTAAATCGCAAAAGGAACAGATTCGTAACTGGAGAGACAAGACACACTAAAACAATTTTCACAACACACTTTTCTTTATTTCTCAACTCTTTCTCTATTTTGCTTTCTTGCTCTCTCATTTTCACATTGAAATAAACTATCTATTTATAGCCTATTGCAAGCTTGTTCTACAAGATTCTGATACAATCCGACCTTGGGAGTTTTGGGAATTTTAGGATTATTAGTATTTTATTATTATTTAGTATTTTATTATTATTTAATTAGTCCTTATTTGTACTTGCCCATAAATGGAATTGTCATTTATGGAAAGAAGTCTTTTATGGAATATGAGTCTTTTACCTTAAATAGGATATCTCTAGGTGTCCTATAAATAGGAGTTATTAGGTCACTGTTAAGGCATCAGAAATCATTTGTCATTTATTAGTTTGTAACCTTTTGGCTCTACGGGAGATTCTCTCTAGAGATTTATTATAAAGTTGGTAGATTCTATCAATTGTGGTATCAGAGCCGTTCACCGATCCGGGAATGGTTACTACAAAGATGGAGTCAAGAATGCAAGAATGCGAAGAGGTTTTGGCCGAGATAAAGAAGCAACAACAGGAAATCATGGCTAAGTTAGAAAGCATGGAAGATCGGCTGGGGCAAAAGATCGAGGAAAGGATAAAATCCATGGTGGGCGAACTTCAATCCATGATCGAGCGAACCGTGAAGCAACCAATCCCCGAAACGGGAAATACTGACAAAGGGAAGAGAGCGATGAGCGAAATTGAAGATAGCAGCGGCGGCACGGTCGGAGACTTCGCCATGACGAAAGAGGCACGATGCGGCGGCGAACAAGGGCTGGTGCGAGCGAGATTCGCTGATGAGACGCGAGTGCATGGCTAACCAAGATTCGCTGGACGCGAGTTAGGTCAAGCCGTCGCGGCGGAGAGCGAGCGCGAAGGCGCGGGTTGGGCCGGAGCGAATGGAAAACGAAGAAGTGCAGGTTACGCTGGGGCGGAATATGAGCGAGGAAGCATAAGAAGAGTTGGTTTCGCTAGTGCGAGGCGCGAGGACGCGGGCGAGGGGTTCGCGGTAGCGCAGCGTGACGACGAAGAATTCCTGGGCAAAGGCGTTTCGCAGGGTGACAGTGTGGGGGCGAAGGGAGGTGGTTTCGCTAGTGGGGGGCGCGAGGACGCGGGCGACGGATTTGCGGAGGCGCGACGTGTCAACGGAGGGTTCTTGGGCGGAGGCGTTGCACATGACGCGGTGAAGGAGCGAGGAGAGGTAGTTTCGGCGTCGCAGAAGTGGGATTTTGCGAAAGCAACGACATTGGCAGTACGGGGGAGAGATTTTGCGGAGGCAGCACTGGCGTCGCTGGAGCGGGGTTTTGCGAAGGCGATAGTGCGCGGAGGTGGAACCTGCAGCGGTGGTTTGTGCGGCACGGGCACGGGGGTGAGTCGGACGGTCTCGTCTGGACCGGGTCGATTCGGGTTGAACCGGGTAGACCGTTGGACTGAGCCATTTGAGATAAGACTAGGGGAGACCCTAGATTTGACGGTTGGAACGATTGTGCTTGGGGTGACACTGTCCGAAATAAGGGACGAGATTTCGGGTGGGGAGGAGAAGAAAGATTTTAGAGGGGAGGTCAGAGAGCAGGAGGAAGGGAGGGACCGGGGTACGACAGGAGATTTAGAAAAATGGAGATGTCGGTTTTCAAGGGTCTTGCTGATGAGGATCTGGTGGGATGGCTGAGCCGGGTCGAGCGTTATTTCCTGGTGAACACGCTAAATGAATATGAAGGGGTTGAGGCAGCAGGGTTATGCCTAGAAGGGGAGGCATTGGAGTGGCTTCAGTATGAGGAGGACCGTGCTTCTTTTCGTTCCTAGAACGAATTCAAAGAGGGGTTGTTGGTGCGTTTCGAACCGGCGGCTCAGACAAATAAGTATGCCAACTTCATGAGTTTGAAGCAAATAGGAATAGTGAAGGAATACTGCAGAAGCTTTGAGCGCTTTGCTAAGGGAATGCGCGATATCAGTGCGAGTGCATTAGAGGGGAAGTGGGAAAGTGGACTGAAAGAGGAGATACAGAGCGCGATGCGTAAACTGTGACCAGTGGGCATCGAAGAGAAAATGTTTATGGCCCAAGTGATTGAGGATGATTTTGCTTTTCAGGCTGCTAAAAACGAAGGAAGTACTTCTGCAACGGTCAAGGCTAAAGCAGGAACGATTGTGTCGGTGACTGGAAGTACAAAGACGTTTTCCCACAAGACTACAACCGTTCTCCCAGCGTCTTGTAAAAAACTATTTGAAGCCGAAATTCAAGTGAGGAAGGACAAGGGGTTATGCTTCCGCTGTGATGAACGATTTGTCCCAGGGCATCGTTGCAAGACGACAGAGCTCCAGAACTTGGATGTGTGGATCGTCCCGGATGCGCTTGATTACCAGAGAGCTGGTGTGACAGACTTTTCACCAGAAGACGGAACTGCAGAAGACGGCGTCGGAGATGGAACACCTTGAGGACAAGGTGGCTCTCGGGGGGGGGGGGGAAGTATTGATACAATCCGACCCTGGGAGTTTTGGGAATTTTAGGATTATTAGTATTTTATTATTATTTAATTAGTCCTTATTTGTACTTGCCATAAATGGAATTGTCATTTATGGAAAGAAGTCTTTAATGGAATAGGAGTCTTTTACCTTAAATAGGATATCTCTAGGTGTCCTATAAATAGGAGTTATTAGGTCATTGTTAAGGCATCAGAAATCATTTGTCATTTGTTAGTTTGTAACCTTTTTGCTCTACGGGAGGTTCTCTCTAGAGATTTATTATAAAGTTGGTAGATTCTATCAGATTCTAAAGCCATAAATTTGTAACAATTTTGGCATTCAATTACATAAAACCATTTTCCCACTAACTCCTAAATTTAAGACCCACTAATCACATTTAAGAGCTCACTAACTCCTAAATAAAAACTCCCACTAACAATAATTAAAACACATTAAAATATATTATTAAAGTTTATTCAACAAAACTCCTCCATAAACTTAAATGCTTCTGCCATCCGCCATGCCAATCATATTCTTGAACTTATCGAACAAAACCTTTGGTAACAGTTTTGTATAGATATCTGCAACTTGATCTTGACTTGCCACATGCAACAATTCTACGCTTCCTTCCTTCACATGATCTCGGATGAAATGAAAACGAACATCAATATGTTTGCTTCTTTCATGATTCACTGGATTCTTTGCTAACTCAATTGCTGATCTGTTGTCAACTTGAATCATAGTTGCACCAAATTGCTTTAACTCCATCTTGCTCAACAGATTTCTGAGCCATATTGCATGACATACGCACCAAAAAGCTGCAACATATTCAGCTTCGCATGTCGAAAGCGTTACAATCGGTTGTTTCTTTTATAGCCAAGTAAATGTTGTGTTGCCTATAAAGAATGCGTAACCCGATGTACTTTTCCGTTCGTCTATGTCTCTGTACCAATCACTGTCAGAGTATCCAATCAGCTTATAATCGTCCGCTTTCGAATATAACATCCTGAGGGATGTTGTACCTTGGATGTATTGAAAAATTCGCTTCAATGCCTTCCAATCCGTATAAACCGACTCCTCCATAAACCGACTAACAATGCCAACACTCAATGCGATGTTTGGCCTTGTGCACGTGAGATAGCGAAGGCTTCCCACCAAACTTCTGTATCTGCTCGCATCTACGCATTCTCCTTCATCAAACTTTGAAAGTTTTGTACCTGGTTCCATTGGTACTAAGACCGGGTTGTAATTCGTCATTTTGAACTTTTTCAAGATCTCCTTCGCATAATTCTATTGCAATACAAAAATGCATGTCTCTTCTTGTTTAACCTCTAAACCGAGGAAAAATTTCAGCAAACCCAAATCTTTCATCTCAAATTCTTGCGTCATTGTACTCTTAAATACCTCTATCATTGCATTACTATTTCCCATAAAAATCAGGTCAGTAACATAAAGAGCAACAAAAATCGCATTACCTCTGCACTGCTTTGTGTAGAGCGCATGCTCGTAAGGACATTGCATGTACCCAATCTCTTTGAAATATGCATCAATGCGAGTATTCCACGCTCGCGGTGCTTGCTTCAACCCGTAAAGCGCATTCTTCAATTTAAGCACTTTCTTCTCTTTTCCAACTTTCACATATTCAGGTGGTTGCTCAATGTACACTTCTTCTTCAAGCACACCGTTCAAGAATGCCGTCTTGACATCCATATGAAATATAGGCCATTTGAATTGAGCCGCATGAGAAATAAGCAATCGGATTGTCTCCATTCTCGCAATGGGAGCAAAGACTTCATCATAGTCAATTCCCGCTTTCTGCTTGTATCCCTTCGCAACAAATCGCGCCTTGTAACACTCTATCTTGCCTTGAGCATTCATCTTCTTCTTGAATACCCACTTCACGCCAATTGAGTAACTTGCATTCGACAATTCTGTCAACTTCCACGTATTGTTGCTCTCTATCGCATTGATCTCCTCATCCATGGCACTTCGCCACTTCTTGTCTTGCACTGCTTCTTCAAAGCTAATATCTTCCACATCTGCCAAAAGACATACAAGATGTACCTCATTTGTCGCATCTACAAATCTTGCAAACTTCGCATTCTGGGTTGTTGCGGTTCATCTTCATTATCAGTAGCTCCAAAATCTGTTGATTTACTTAATGATGCAATAACTGGTGATTCTCTAACTTCGATGCTAACTTCCATCGCATTGTTCCAGTCCCATTTTCTTTCTTCATTGACTCGCACATCACGACTCACTATCATCTTCTTGCTTATTGGGTCAAGTAGCTTGTACCCCTTTTGTTTTCTCATCATAGCCAATGAAAACATACTTCTTGCTTTTGTCTTCGAGCTTAGTTCTTCGCTGATCTGGTACGTGTGCATAAGCCACACTACCAAACACTTTCTAATGTGAAATAGTCGGCTTCTGTCCTCTCCATACCTCTTGCGGTGTCTGATCACCCAACTTCGCATGTGGACATCGATTTGCAGATAGATAGCGCATTGCGTTGTTTCTGCCCAAAACTCCTTTGGCATACTTTTGCTCTTCAGTATTGCTCGAACCATGTCAAGAATGGTCTTGTTCTTCCTCTTAGCCACACCATTTTGTTAAGGAGTATATGGTGTGGTTAGAAATCGCCTTATGCCTTGCTCCTTGCAATACACCATGAAAACCGTCGAAGTATATTCGCCACCTCTGTCAGATCACGCAGCTTTGATCTATCTACTTGTTTCCTTCTCCACCTTCATTCTGACTTTCTTGAACGCCTCAAATGCTTCTGATTTTTCTTTTAAGAAATAAACCCAAGTTTTTCGTGAGAAATAATCAATAAAGCAAATGAAATACCTTTTACCAATGAAAGATCCGGGGGTAATTGGTCCTCATATATCAGTATGAATCATCTTGAGCGGTTGCTTAGCTCGTATTCCGCTTTATTCTGAAACGAGATTCTCGCATGCTTGCTGAGCACACATTCTTCACAAAACTTTCCATCGTAATCCATGTCAGGTAGCCCGTGCACCATATTTTTCTTCGCTAACTCTTTTAGTCCACCATGATGTAGGTGACCAAAATGAAGATGCTAAAGTGATGTGATATGATCCAGGATCTAGATTATATCAAAAGATAAAAGAATAAAGATAAACCAAGTTTTGATAGGAACTTGGAACCTCCCTTCTCAAGAGAATCTCTTGAGTCCTACAATAAATCACTCAATAACTCATTTAACAATTGGATGTCTAAACCCTAACCTAACCCACTCTATTTATAACAAAATACTAACTTATTCTCCAAGTAATGGCTAAATAGAGCCCTAGGCCCAATCGAGTCCTAGGCCCAACCTTATCAATACCCACCCCTTTAAAGCACCTTGTCCTCAAGGTGGGCATACACAAAAAATAGAAAAATAAAAATTGTTGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTGGCTGCACCTTGTCCTCAGTGGTGGAGGCGGCGGTGACGGAGGTGGTGGCGATGGCGGTAACGGCAACACTGGTGGTGGTGGCGGCGGTAGTGTCGGAGGTGGTGACGGCGGAGATGGCAGCGGCGATGTTAGAGGTGGTGGCGGCGATGGTGGCGGCGGCGGCAGCAGCAGCGCAGTGGGGTTGGTGATGGCGGCGGAGGTGGGGGCAATGGCGCAGAATGTGGCGGTGGCGGTGGCGACATCGGAGGAGGCGGTGGTGGCGGGGTGAAAACCCTAGCCATCATTGTTTTTTCCATAATAATTTCCTCTTTGAGCTCTCTAAGAGAACTATTTAGGTCAATGCAGCTCTCCCTCATTTTTCTGAGATCTTCTTTCATTGAAGCTATCTCTTCTCTGATTTCTTTTCTTAGAGAACCAACCGAGGCCATCAAACTTAGCAACGCCTCTCGAAATAAACGAACCTCTTCTTGATCCATCTCTACAACCAAGAATCGAACGGCTCTGATACCAATTGATATGATCCAGGATCTAGATTATATCAAAAGATAAAAGAATAAAGATAAACCAAGTTTTGATAGGAACTTGGAACCTCCCTTCTCAAGAGAATCTCTTGAGCCCTACAATAAATCACTCAATAACTCATTTAACAATTGGATGTCTAAACCCTAACCTAACCCACTCTATTTATAACAAAATACTAACTTATTCTCCAAGTAATGGCTAAATAGAGCCCTAGGCCCAATCGAGTCCTAGGCCCAACCTTATCAATAAACATCGTTTTAGGTCATTGAAACTCTCCTTTAGGTCTTCTCTAATTTCTTTTTTTAGAGAAGCTACCTCTTCTCTGAGGTCTTTTTTCAAGTCCACCATCAAACTTTGCAACTTTTCTTGAATGAAACGAAGAACCTCGTGATCCATCTCTACAACCAAGAATCGAACGGCTCTGATACCAATTGATATGATCCAGGATCTAGATTATATCAAAAGATAAAAGAATAAAGATAAACCAAGTTTTGATAGGAACTTGGAACCTCCCATTCTCTTGAGCCCTACAATAAATCACTCAATAACTCATTTAACAATTGGATGTCTAAACCCTAACCTAACCCACTCTATTTATAACAAAATACTAATTTATTCTCCAAGTAATGGCTAAATAGAGCCCTAGGCCCAATCGAGTCCTAGGCCCAACCTTATCATGATGCTTTATCTTCTACATCGACTCACAAACACTTTTCTAGCACGCTTCTCAGATTCAATCTATACATGCGATTTCTTCCCATCTCAACTTGAGTGACTAAACGTTCTTGCTTGTCCTTCAAATGTAATAGCCGATCTTTCAAAAATATAGAAAAATCCTTCTCTGTCAGTTGCCCCAAACCCAAAATATTTGTTTTGAGGTTTGGTACATAATAAACATCTTGGATTGACTCTGTTAAACCATCATTTAGCAAATAAAAAATCGTACCTTTGCCTTTGACCTCCATTTTTGACGCATCGCCAAAAGAAACATGATCGTCTTCAATTTTTCGCATCTCTTTGAATAGATGCTCGTAATCGCACATATGGTTGCTTGCCCCTGAGTCGAGATACCATAAAGTATCATTGTTAGCACTGTCATCATTTTGCGTCATCAAAAGAAGACCTTCATTTGCTTCGTCTTCGAATGCTAAATTGGTTGTTTCTTCAACCCTTTTATCCGCTCGACAATCTCTTGCAAAAGGTCTCACTTTTCTACAATTGTAATATTTTTTGGAATTACAATCACTCGCATAGTGACCATATTTGTGACATTTGTAGCACTCAATGTTCTAATAATTCGATCGACCGCCTCTTCCTTGACCATGTGCTTTTCCGCGATTAGCGAATTGGCTTGTCTATCCCTTCTCTTCATGACTGTCACTTTGACTACCGCGACCATTTCCACGACCTCCAAGGCCACATCCTCTACCCTGAATTTTTTTAGAATGGAGTACTTTTTCGTCTTTGATTGTTGCTTTGGTTTGAAGCGCCTGCTCAAGCATTTCCTCTTTCTTCTTGTTCTTTCGTTGCTCGTGTGCCTTAAGAGAACCTGAAAGCTCATCAACAGTGAGCGTCGCAAGGTTTTTTGACTCTTCTATTGTGCACACAACATTCTCAAAATTGCTGGTCAACGATCTCAAAATCTTCTAAAAAACTTACGCATCTGTTAGCTTTTCACCATTGCGATTGAGTTGATTCACCAACGTTTGCACACACATGATGTAGTCAAATACGCTTTCTGATTCCTTCATCTTTTTGCTCTCCTACTCGCCGTGAAGAGTTTGGAGATGCACTTGCTTCACTCGGCGGCTCTTTTGAACACTTTCTCTAAAGTGTCCCATGCTTCTTTTGAAGTAGTTGCACTCGCAATCTTCTCAAAGCCCGACTCGTCAACTGCTCGGAACAACATATACAATGCCATTTATCCTTCGATCGCGTCTCTTTCAACACTTTGGTTTGAGCCACCGTATAACCTGCGATATTCTTTGGTTCTACGAAACCTTCTTTGACCACCTCCCATGCATCATGAGAGCCGAGAAGAACTTTCATCTGGATGCTCCAATTCTCGTAATTCGCCTTCGTCAATCGTGGTAGCGGCATTTGACCCGTCAGGTTCACCATGGCTCTGATACCAATTTGTGCAATCTAAATGCTGCTTTGATACCAATTTGTGGAAATTCTAAATCGCAAAAGGAACAGATTCATAACTGGAGAGACAAGACACACTAAAACAATTTTCACAACACAGTTTTCTTTATTTCTCAACTTTCTTTCTCTATTTTGCTTTCTTGCTCTCTCATTTTTACAAATGAAATAAGCTGTCTATTTATAGCCTATTACAAGCTTGTTCTACAAGATTCTAAAGCCATAAATTTGTAACCATTTTGGCATTCAATTACATAAAACCATTTTCCCACTAACTCTTAAATTTAAGACCCACTAATCACATTTAAGAGCTCACTAACTCCTAAATAAAAACTCTCACTAACAATAATTAAAACACATTAAAATATATCATTAAAGTTTTTTCAACACTTTTGACATCGCCAAACCACATATCATAATGGTGAACTAAAAAAAGTAACAATATAGTAGACTATACTATTAGTAACATCTAACATTTCATATTGAAACAGTTAATAATGGCTGTTTATTGACAAAATAACTTTTGTTTTTTTTTATTTGACAACATTTGGAGGAGAGGATTTGAACTTGTAATGTTGTGATTACTAAGTTATACAGAATGTTGCTACTAGAGCTATACTCTTGTTGGCATTAATTTAAGAACTTCGGAGAACAAAGTAGTTAGTTTTAGTTGCTTTTAATGGAGCTTTACATCTGGATTCTAAGGGATTTTACTCATTACCCAAAAGCACAATAGGATATTCCTTTTAACATTTTTTTTGGGGACGAAAATATTGGTAACTTCAGTTTTTTATTTTTTTTAAAAAACCTAATGGATATTTTAGAATCGTCATTTAGTGTAGAGAAGTTTACAATTAGTAATTGTTTCGATCAATGAGATTAGAGTGTTAGCACTTTATCAAGCAATCATGCATCATTTTTGGTACTCAAATGCTTAAATGTAGATCATATTTGTATATGTTCAGTTGTTTGTATTATTATACGTCGTCTTAGAGATCAAAATTTTATTTATTTCTTTTTAGTATGATAATAAGTTATCACACTGGCTAATCTTATTTCTGATATCTAGAAAGACTATCTTGGTGCTCATTCCTGGCACCATGATAAATGAATGCCAGACTGTCATATTGCAGATTGATTTCACGGATTTTTCATGGTTGATTTTTCACCTCAATAAGATGTGTTGTTTTATCATGGAATTTTTTGGACAATGTATTAATTAACCAAGGATGACAACATATAGTTATATAGATAATGCATCAACCCATCAACCAAGAACTACATGTATTTATCTGGGTTGTGGGTAATGCATCAATTAGGAACTACCGGGGATAGTTTGTTCTTAGCTTTTGCGTTTCAAATTTGAGTAGGTTTCATAACTTGTCTATATGTATTCCCTGATATTTACGATAAGTAAACCTACATACTAAATATAGATTTGAGTTACTAATTTTAAGTTGCCTAAAAGTAATTCAAGGTAGAAGGCTTGGGCTTTGAAGGTGTTCGAGACTCACCTGTGACATTTATGTGTAGACACCTCTCATGTCTCCATTCTTTCGATCTCTCCCGGTGTCTGGCCTAGGGTTGGAAGTGATTACCCCGAGTGTAATAGAACGAAGCTCCAATTTTCTAGTTAAAAAAACAAAAAGTGATTCATGGACTTAACACATCCATCCCTTAAAAGTAACCATTCATTACCCACGTACTAGTAAACATTTATGTAGGAGAATAATTTTTCCTCTTCTCCCAGCCTCCAGCCTCGGTTTTCTTTTTTCCTTTTAATTTATTGACAGCCTTCTAATTGATATGAAATTTCATTGGCAGGTGGCTCGAAGCCCGCAACTCTTGAAACTGGTGCTGTTGTTAATGTTCCTCTGTTCGTAAATGTAGGCGATAGTATAGTGATAGATACAAGGACTGGACAATACACGAGCCGGGCATGAATTTTTTGACACACTTGTAGTACTCTTCTTGGCGATTCTTAGGTTTGGTCGTAGATTGAGCATGTTGAAGATCAGCAATTGGGCTGTGAAGATTTTGTCTAAACCTGTTCTATTTTGACTATAAACATTTAGATCTTCAGTTAGTGTTGAAATATATCCAAGTATACCATGAAACAGGACATCAGATGCCAAAACCAAAGCATCCTTCTTGTGTTATGCAGTTTCCCACATTTTTAGCCAAGTGGCTTTGACAATTATATTTAATATTAGGGGTGAACATGGGCTAGGTTGGGTTGAGGGAG

mRNA sequence

CTGTGATAAAGTTGACAAAAACCTCATAGCTGAAGCGCCTAAAAGAAAGGAGGAGTTAGACGGGGGTACTATAAAAAAGGAGTCCTTATCCCCACATTCATTTGCTGTCATTCTGCGCAACACACAAACATGGCTGCTAACATTGTTTCCTGTTGTAATGCCTCCTTCGCTTCTGCTTTTATCGCCCCCTCAACCAATTTGTCTTTCAAGCCCTCCCTTCTCCCAATCCCGCGTTTGCGAACTGGGTTTTCGAGGATTTACGCGTTTACCAGCAACGACATCAAAGTTGGCTCCAATATTGAAGTCGATGGAGCTCCTTGGCGCGTATTAGAGTTCCTTCATGTCAAACCCGGTAAAGGAGCAGCTTTTGTTAGGACCAAAATGCGTAATTATGTTACAGGCAATACGGTCGAGAAAACGTTTCGAGCAGGAAGCTCGCTTGATGAGGCCAATGTATACAAGGAAGTCAAGCAGTTCACTTACAAAGACGGTTCCCAGTTTGTTTTCATGGATCTGAATACATATGAAGAAATACGCCTAAATGAAAAAGACGTTGGTGATAGGACAAAGTGGCTGAAAGAAGGAATGGACTGCATCGTATTGTTTTGGAATGGGAAGGTTATTGATTTTGAGGTTCCCATCACAATTCAATTGGCTGTGGTTGACGTTGATCCTGGATTGAAAGGGGACACGGCACAAGGTGGCTCGAAGCCCGCAACTCTTGAAACTGGTGCTGTTGTTAATGTTCCTCTGTTCGTAAATGTAGGCGATAGTATAGTGATAGATACAAGGACTGGACAATACACGAGCCGGGCATGAATTTTTTGACACACTTGTAGTACTCTTCTTGGCGATTCTTAGGTTTGGTCGTAGATTGAGCATGTTGAAGATCAGCAATTGGGCTGTGAAGATTTTGTCTAAACCTGTTCTATTTTGACTATAAACATTTAGATCTTCAGTTAGTGTTGAAATATATCCAAGTATACCATGAAACAGGACATCAGATGCCAAAACCAAAGCATCCTTCTTGTGTTATGCAGTTTCCCACATTTTTAGCCAAGTGGCTTTGACAATTATATTTAATATTAGGGGTGAACATGGGCTAGGTTGGGTTGAGGGAG

Coding sequence (CDS)

ATGGCTGCTAACATTGTTTCCTGTTGTAATGCCTCCTTCGCTTCTGCTTTTATCGCCCCCTCAACCAATTTGTCTTTCAAGCCCTCCCTTCTCCCAATCCCGCGTTTGCGAACTGGGTTTTCGAGGATTTACGCGTTTACCAGCAACGACATCAAAGTTGGCTCCAATATTGAAGTCGATGGAGCTCCTTGGCGCGTATTAGAGTTCCTTCATGTCAAACCCGGTAAAGGAGCAGCTTTTGTTAGGACCAAAATGCGTAATTATGTTACAGGCAATACGGTCGAGAAAACGTTTCGAGCAGGAAGCTCGCTTGATGAGGCCAATGTATACAAGGAAGTCAAGCAGTTCACTTACAAAGACGGTTCCCAGTTTGTTTTCATGGATCTGAATACATATGAAGAAATACGCCTAAATGAAAAAGACGTTGGTGATAGGACAAAGTGGCTGAAAGAAGGAATGGACTGCATCGTATTGTTTTGGAATGGGAAGGTTATTGATTTTGAGGTTCCCATCACAATTCAATTGGCTGTGGTTGACGTTGATCCTGGATTGAAAGGGGACACGGCACAAGGTGGCTCGAAGCCCGCAACTCTTGAAACTGGTGCTGTTGTTAATGTTCCTCTGTTCGTAAATGTAGGCGATAGTATAGTGATAGATACAAGGACTGGACAATACACGAGCCGGGCATGA

Protein sequence

MAANIVSCCNASFASAFIAPSTNLSFKPSLLPIPRLRTGFSRIYAFTSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKMRNYVTGNTVEKTFRAGSSLDEANVYKEVKQFTYKDGSQFVFMDLNTYEEIRLNEKDVGDRTKWLKEGMDCIVLFWNGKVIDFEVPITIQLAVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVIDTRTGQYTSRA

Homology

[Close]

BLAST of Sed0002775 vs. NCBI nr
Match: XP_038904606.1 (elongation factor P isoform X1 [Benincasa hispida])

HSP 1 Score: 393.7 bits (1010), Expect = 1.1e-105
Identity = 199/232 (85.78%), Postives = 209/232 (90.09%), Query Frame = 0


Query: 9   CNASFASAFIAPSTNLS------FKPSLLPIPRL-----RTGFSRIYAFTSNDIKVGSNI 68
           CNAS ASAF+A +++L        KPS+ PI R      RTGF RIYA +SNDIKVG+NI
Sbjct: 7   CNASSASAFLARTSSLKTSLPLPLKPSVFPIRRSSSASPRTGFFRIYALSSNDIKVGTNI 66

Query: 69  EVDGAPWRVLEFLHVKPGKGAAFVRTKMRNYVTGNTVEKTFRAGSSLDEANVYKEVKQFT 128
           EVDGAPWRVLEFLHVKPGKGAAFVRTK+RNYVTGNTVEKTFRAGSSL+EANVYKEVKQFT
Sbjct: 67  EVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSLEEANVYKEVKQFT 126

Query: 129 YKDGSQFVFMDLNTYEEIRLNEKDVGDRTKWLKEGMDCIVLFWNGKVIDFEVPITIQLAV 188
           YKDGSQFVFMDLNTYEEIRLN  DVGDRTKWLKEGMDCIVLFWNGKVIDFEVPITIQL V
Sbjct: 127 YKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPITIQLTV 186

Query: 189 VDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVIDTRTGQYTSRA 230
           VDVDPGLKGDTAQGGSKPATLETGAVVNVPLF+NVGDSIVIDTRTGQYTSRA
Sbjct: 187 VDVDPGLKGDTAQGGSKPATLETGAVVNVPLFINVGDSIVIDTRTGQYTSRA 238

[Close]

BLAST of Sed0002775 vs. NCBI nr
Match: XP_038904607.1 (elongation factor P isoform X2 [Benincasa hispida])

HSP 1 Score: 391.0 bits (1003), Expect = 7.2e-105
Identity = 195/227 (85.90%), Postives = 206/227 (90.75%), Query Frame = 0


Query: 9   CNASFASAFIAPSTNLS------FKPSLLPIPRLRTGFSRIYAFTSNDIKVGSNIEVDGA 68
           CNAS ASAF+A +++L        KPS+ PI R  +   RIYA +SNDIKVG+NIEVDGA
Sbjct: 7   CNASSASAFLARTSSLKTSLPLPLKPSVFPIRRSSSASPRIYALSSNDIKVGTNIEVDGA 66

Query: 69  PWRVLEFLHVKPGKGAAFVRTKMRNYVTGNTVEKTFRAGSSLDEANVYKEVKQFTYKDGS 128
           PWRVLEFLHVKPGKGAAFVRTK+RNYVTGNTVEKTFRAGSSL+EANVYKEVKQFTYKDGS
Sbjct: 67  PWRVLEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSLEEANVYKEVKQFTYKDGS 126

Query: 129 QFVFMDLNTYEEIRLNEKDVGDRTKWLKEGMDCIVLFWNGKVIDFEVPITIQLAVVDVDP 188
           QFVFMDLNTYEEIRLN  DVGDRTKWLKEGMDCIVLFWNGKVIDFEVPITIQL VVDVDP
Sbjct: 127 QFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPITIQLTVVDVDP 186

Query: 189 GLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVIDTRTGQYTSRA 230
           GLKGDTAQGGSKPATLETGAVVNVPLF+NVGDSIVIDTRTGQYTSRA
Sbjct: 187 GLKGDTAQGGSKPATLETGAVVNVPLFINVGDSIVIDTRTGQYTSRA 233

[Close]

BLAST of Sed0002775 vs. NCBI nr
Match: XP_004137675.1 (uncharacterized protein LOC101222385 [Cucumis sativus])

HSP 1 Score: 388.7 bits (997), Expect = 3.6e-104
Identity = 198/229 (86.46%), Postives = 205/229 (89.52%), Query Frame = 0


Query: 9   CNASFASAFIA------PSTNLSFKPSLLP--IPRLRTGFSRIYAFTSNDIKVGSNIEVD 68
           CNAS ASAF+A       S +L  KP  L    P  RTGF RIYA TSNDIKVG+NIEVD
Sbjct: 7   CNASSASAFLARTSSSKTSLSLPLKPLALRSFSPSSRTGFFRIYALTSNDIKVGTNIEVD 66

Query: 69  GAPWRVLEFLHVKPGKGAAFVRTKMRNYVTGNTVEKTFRAGSSLDEANVYKEVKQFTYKD 128
           GAPWRVLEFLHVKPGKGAAFVRTK+RNYVTGNTVEKTFRAGSSL+EANVYKEVKQFTYKD
Sbjct: 67  GAPWRVLEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSLEEANVYKEVKQFTYKD 126

Query: 129 GSQFVFMDLNTYEEIRLNEKDVGDRTKWLKEGMDCIVLFWNGKVIDFEVPITIQLAVVDV 188
           GSQFVFMDLNTYEEIRLN  DVGDRTKWLKEGMDCIVLFWNGKVIDFEVPITIQL VVDV
Sbjct: 127 GSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPITIQLTVVDV 186

Query: 189 DPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVIDTRTGQYTSRA 230
           DPGLKGDTAQGGSKPATLETGAVV+VPLF+NVGDSIVIDTRTGQYTSRA
Sbjct: 187 DPGLKGDTAQGGSKPATLETGAVVSVPLFINVGDSIVIDTRTGQYTSRA 235

[Close]

BLAST of Sed0002775 vs. NCBI nr
Match: XP_023538922.1 (uncharacterized protein LOC111799706 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 388.7 bits (997), Expect = 3.6e-104
Identity = 198/233 (84.98%), Postives = 208/233 (89.27%), Query Frame = 0


Query: 9   CNASFASAFIA------PSTNLSFKPSLLPIPRL------RTGFSRIYAFTSNDIKVGSN 68
           CNASF+SAF+A       S +LS KPS+L   R       RT FSRIYA TSNDIKVG+N
Sbjct: 7   CNASFSSAFLARRSSSMASLSLSSKPSVLRTRRFSSSANSRTRFSRIYALTSNDIKVGTN 66

Query: 69  IEVDGAPWRVLEFLHVKPGKGAAFVRTKMRNYVTGNTVEKTFRAGSSLDEANVYKEVKQF 128
           IEVDGAPWRVLEFLHVKPGKGAAFVRTK+RNYV+GNTVE+TFRAGSSLDEANVYKEVKQF
Sbjct: 67  IEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVYKEVKQF 126

Query: 129 TYKDGSQFVFMDLNTYEEIRLNEKDVGDRTKWLKEGMDCIVLFWNGKVIDFEVPITIQLA 188
           TYKDGSQFVFMDL+TYEEIRLN  DVGDRTKWLKEGMDCIVLFWNGKVIDFEVP TIQL 
Sbjct: 127 TYKDGSQFVFMDLSTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPNTIQLT 186

Query: 189 VVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVIDTRTGQYTSRA 230
           VVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIV+DTRTGQYTSRA
Sbjct: 187 VVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 239

[Close]

BLAST of Sed0002775 vs. NCBI nr
Match: KAE8650971.1 (hypothetical protein Csa_001935 [Cucumis sativus])

HSP 1 Score: 388.7 bits (997), Expect = 3.6e-104
Identity = 198/229 (86.46%), Postives = 205/229 (89.52%), Query Frame = 0


Query: 9   CNASFASAFIA------PSTNLSFKPSLLP--IPRLRTGFSRIYAFTSNDIKVGSNIEVD 68
           CNAS ASAF+A       S +L  KP  L    P  RTGF RIYA TSNDIKVG+NIEVD
Sbjct: 73  CNASSASAFLARTSSSKTSLSLPLKPLALRSFSPSSRTGFFRIYALTSNDIKVGTNIEVD 132

Query: 69  GAPWRVLEFLHVKPGKGAAFVRTKMRNYVTGNTVEKTFRAGSSLDEANVYKEVKQFTYKD 128
           GAPWRVLEFLHVKPGKGAAFVRTK+RNYVTGNTVEKTFRAGSSL+EANVYKEVKQFTYKD
Sbjct: 133 GAPWRVLEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSLEEANVYKEVKQFTYKD 192

Query: 129 GSQFVFMDLNTYEEIRLNEKDVGDRTKWLKEGMDCIVLFWNGKVIDFEVPITIQLAVVDV 188
           GSQFVFMDLNTYEEIRLN  DVGDRTKWLKEGMDCIVLFWNGKVIDFEVPITIQL VVDV
Sbjct: 193 GSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPITIQLTVVDV 252

Query: 189 DPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVIDTRTGQYTSRA 230
           DPGLKGDTAQGGSKPATLETGAVV+VPLF+NVGDSIVIDTRTGQYTSRA
Sbjct: 253 DPGLKGDTAQGGSKPATLETGAVVSVPLFINVGDSIVIDTRTGQYTSRA 301

[Close]

BLAST of Sed0002775 vs. ExPASy Swiss-Prot
Match: B1XKV1 (Elongation factor P OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) OX=32049 GN=efp PE=3 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 3.0e-61
Identity = 109/182 (59.89%), Postives = 141/182 (77.47%), Query Frame = 0


Query: 47  TSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKMRNYVTGNTVEKTFRAGSSLDE 106
           +SND + G++IE+DG+ WRV+EFLHVKPGKG+AFVRTK++N  TG+ VEKTFRAG ++ +
Sbjct: 3   SSNDFRTGTSIELDGSVWRVVEFLHVKPGKGSAFVRTKLKNAQTGSVVEKTFRAGETVPQ 62

Query: 107 ANVYKEVKQFTYKDGSQFVFMDLNTYEEIRLNEKDVGDRTKWLKEGMDCIVLFWNGKVID 166
           A + K   Q TYK+G QFVFMD+ TYEE+RL E  +GDR K+L E M+  VLFWN +VID
Sbjct: 63  AILDKRTMQHTYKEGEQFVFMDMETYEEVRLTEAQIGDRVKYLMEEMEVNVLFWNSQVID 122

Query: 167 FEVPITIQLAVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVIDTRTGQYT 226
            E+P T+ L V + DPG+KGDTA GG+KPA + TGA VNVPLF+++G+ I IDTRT  Y 
Sbjct: 123 VELPNTVVLEVTETDPGVKGDTATGGTKPAIVSTGAQVNVPLFISIGERIKIDTRTDTYL 182

Query: 227 SR 229
            R
Sbjct: 183 GR 184

[Close]

BLAST of Sed0002775 vs. ExPASy Swiss-Prot
Match: Q54760 (Elongation factor P OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=efp PE=3 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 5.1e-61
Identity = 109/182 (59.89%), Postives = 140/182 (76.92%), Query Frame = 0


Query: 47  TSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKMRNYVTGNTVEKTFRAGSSLDE 106
           +SND + G+ IE+DGA WRV+EFLHVKPGKG+AFVRTK++N  TGN VEKTFRAG ++ +
Sbjct: 3   SSNDFRTGTTIEIDGAVWRVVEFLHVKPGKGSAFVRTKLKNAKTGNVVEKTFRAGETVPQ 62

Query: 107 ANVYKEVKQFTYKDGSQFVFMDLNTYEEIRLNEKDVGDRTKWLKEGMDCIVLFWNGKVID 166
           A + K   Q+TYKDG  FVFMD+ TYEE RL    +GDR K+LKEGM+  V+ WNG+VI+
Sbjct: 63  AVLEKSTLQYTYKDGDDFVFMDMETYEEGRLTAATIGDRVKYLKEGMEANVITWNGQVIE 122

Query: 167 FEVPITIQLAVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVIDTRTGQYT 226
            E+P ++ L V++ DPG+KGDTA GG+KPA +ETGA V VPLF++VG+ I IDTR   Y 
Sbjct: 123 VELPNSVVLEVIETDPGVKGDTATGGTKPAKVETGAQVMVPLFISVGERIKIDTRNDSYL 182

Query: 227 SR 229
            R
Sbjct: 183 GR 184

[Close]

BLAST of Sed0002775 vs. ExPASy Swiss-Prot
Match: Q5N1T5 (Elongation factor P OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=efp PE=3 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 5.1e-61
Identity = 109/182 (59.89%), Postives = 140/182 (76.92%), Query Frame = 0


Query: 47  TSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKMRNYVTGNTVEKTFRAGSSLDE 106
           +SND + G+ IE+DGA WRV+EFLHVKPGKG+AFVRTK++N  TGN VEKTFRAG ++ +
Sbjct: 3   SSNDFRTGTTIEIDGAVWRVVEFLHVKPGKGSAFVRTKLKNAKTGNVVEKTFRAGETVPQ 62

Query: 107 ANVYKEVKQFTYKDGSQFVFMDLNTYEEIRLNEKDVGDRTKWLKEGMDCIVLFWNGKVID 166
           A + K   Q+TYKDG  FVFMD+ TYEE RL    +GDR K+LKEGM+  V+ WNG+VI+
Sbjct: 63  AVLEKSTLQYTYKDGDDFVFMDMETYEEGRLTAATIGDRVKYLKEGMEANVITWNGQVIE 122

Query: 167 FEVPITIQLAVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVIDTRTGQYT 226
            E+P ++ L V++ DPG+KGDTA GG+KPA +ETGA V VPLF++VG+ I IDTR   Y 
Sbjct: 123 VELPNSVVLEVIETDPGVKGDTATGGTKPAKVETGAQVMVPLFISVGERIKIDTRNDSYL 182

Query: 227 SR 229
            R
Sbjct: 183 GR 184

[Close]

BLAST of Sed0002775 vs. ExPASy Swiss-Prot
Match: B0JHV3 (Elongation factor P OS=Microcystis aeruginosa (strain NIES-843) OX=449447 GN=efp PE=3 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.1e-60
Identity = 105/182 (57.69%), Postives = 138/182 (75.82%), Query Frame = 0


Query: 47  TSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKMRNYVTGNTVEKTFRAGSSLDE 106
           +SND + G+ IE+DG+ WRV+EFLHVKPGKG+AFVRTK++N  TGN VE+TFRAG +L  
Sbjct: 3   SSNDFRSGTTIEIDGSVWRVVEFLHVKPGKGSAFVRTKLKNVQTGNVVERTFRAGETLPS 62

Query: 107 ANVYKEVKQFTYKDGSQFVFMDLNTYEEIRLNEKDVGDRTKWLKEGMDCIVLFWNGKVID 166
           A + K   Q TYK+G QFVFMD+ T+EE  L    +GDR K+LKEGM+  +LFWN +V+D
Sbjct: 63  ATIEKRTMQHTYKEGDQFVFMDMETFEEATLTPVQMGDRAKYLKEGMEVNILFWNDQVLD 122

Query: 167 FEVPITIQLAVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVIDTRTGQYT 226
            E+P ++ L + D DPG+KGDTA GG+KPA +ETGA V VPLF+++G+ I +DTR G Y 
Sbjct: 123 IELPTSVILEITDTDPGVKGDTATGGTKPAIVETGAQVMVPLFISIGERIKVDTRDGSYL 182

Query: 227 SR 229
            R
Sbjct: 183 GR 184

[Close]

BLAST of Sed0002775 vs. ExPASy Swiss-Prot
Match: B1WNP3 (Elongation factor P OS=Crocosphaera subtropica (strain ATCC 51142 / BH68) OX=43989 GN=efp PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.5e-57
Identity = 99/182 (54.40%), Postives = 139/182 (76.37%), Query Frame = 0


Query: 47  TSNDIKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKMRNYVTGNTVEKTFRAGSSLDE 106
           +SND + G++IE+DG+ WRV+EFLHVKPGKG+AFVRTK++N  TG+ VE+TFRAG ++ +
Sbjct: 3   SSNDFRTGTSIELDGSVWRVVEFLHVKPGKGSAFVRTKLKNAQTGSVVERTFRAGETVPQ 62

Query: 107 ANVYKEVKQFTYKDGSQFVFMDLNTYEEIRLNEKDVGDRTKWLKEGMDCIVLFWNGKVID 166
           A + K   Q TYK+G Q+VFMD+ TYEE+RL+ + +G    ++KE M+  VLFWN  V++
Sbjct: 63  ATLEKRTMQHTYKEGEQYVFMDMETYEEVRLSPEQMGTTVNYIKEEMEADVLFWNDTVLE 122

Query: 167 FEVPITIQLAVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVIDTRTGQYT 226
            ++P ++ L V D DPG+KGDTA GG+KPA +ETGA V VPLF+++G+ I +DTR G Y 
Sbjct: 123 VQLPTSVILEVTDTDPGVKGDTATGGTKPAIVETGAQVMVPLFISIGEKIKVDTRDGSYL 182

Query: 227 SR 229
            R
Sbjct: 183 GR 184

[Close]

BLAST of Sed0002775 vs. ExPASy TrEMBL
Match: A0A0A0LD89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G728090 PE=3 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.7e-104
Identity = 198/229 (86.46%), Postives = 205/229 (89.52%), Query Frame = 0


Query: 9   CNASFASAFIA------PSTNLSFKPSLLP--IPRLRTGFSRIYAFTSNDIKVGSNIEVD 68
           CNAS ASAF+A       S +L  KP  L    P  RTGF RIYA TSNDIKVG+NIEVD
Sbjct: 7   CNASSASAFLARTSSSKTSLSLPLKPLALRSFSPSSRTGFFRIYALTSNDIKVGTNIEVD 66

Query: 69  GAPWRVLEFLHVKPGKGAAFVRTKMRNYVTGNTVEKTFRAGSSLDEANVYKEVKQFTYKD 128
           GAPWRVLEFLHVKPGKGAAFVRTK+RNYVTGNTVEKTFRAGSSL+EANVYKEVKQFTYKD
Sbjct: 67  GAPWRVLEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSLEEANVYKEVKQFTYKD 126

Query: 129 GSQFVFMDLNTYEEIRLNEKDVGDRTKWLKEGMDCIVLFWNGKVIDFEVPITIQLAVVDV 188
           GSQFVFMDLNTYEEIRLN  DVGDRTKWLKEGMDCIVLFWNGKVIDFEVPITIQL VVDV
Sbjct: 127 GSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPITIQLTVVDV 186

Query: 189 DPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVIDTRTGQYTSRA 230
           DPGLKGDTAQGGSKPATLETGAVV+VPLF+NVGDSIVIDTRTGQYTSRA
Sbjct: 187 DPGLKGDTAQGGSKPATLETGAVVSVPLFINVGDSIVIDTRTGQYTSRA 235

[Close]

BLAST of Sed0002775 vs. ExPASy TrEMBL
Match: A0A6J1FIJ6 (uncharacterized protein LOC111444251 OS=Cucurbita moschata OX=3662 GN=LOC111444251 PE=3 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.3e-104
Identity = 198/233 (84.98%), Postives = 207/233 (88.84%), Query Frame = 0


Query: 9   CNASFASAFIA------PSTNLSFKPSLLPIPRL------RTGFSRIYAFTSNDIKVGSN 68
           CNASF+SAF+A       S +LS KPS+L   R       RT F RIYA TSNDIKVG+N
Sbjct: 7   CNASFSSAFLARRSSSTASLSLSSKPSVLRTRRFSSSANSRTRFLRIYALTSNDIKVGTN 66

Query: 69  IEVDGAPWRVLEFLHVKPGKGAAFVRTKMRNYVTGNTVEKTFRAGSSLDEANVYKEVKQF 128
           IEVDGAPWRVLEFLHVKPGKGAAFVRTK+RNYV+GNTVE+TFRAGSSLDEANVYKEVKQF
Sbjct: 67  IEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVYKEVKQF 126

Query: 129 TYKDGSQFVFMDLNTYEEIRLNEKDVGDRTKWLKEGMDCIVLFWNGKVIDFEVPITIQLA 188
           TYKDGSQFVFMDLNTYEEIRLN  DVGDRTKWLKEGMDCIVLFWNGKVIDFEVP TIQL 
Sbjct: 127 TYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPNTIQLT 186

Query: 189 VVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVIDTRTGQYTSRA 230
           VVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIV+DTRTGQYTSRA
Sbjct: 187 VVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 239

[Close]

BLAST of Sed0002775 vs. ExPASy TrEMBL
Match: A0A1S3B5F0 (elongation factor P OS=Cucumis melo OX=3656 GN=LOC103486227 PE=3 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 5.1e-104
Identity = 195/232 (84.05%), Postives = 205/232 (88.36%), Query Frame = 0


Query: 9   CNASFASAFIA----PSTNLS-------FKPSLLPIPRLRTGFSRIYAFTSNDIKVGSNI 68
           CNAS  SAF+A      T+LS       F+ S    P  RTGF RIYA TSNDIKVG+N+
Sbjct: 7   CNASLVSAFLARTSSSKTSLSLPLKSPVFRTSRSSSPSSRTGFFRIYALTSNDIKVGTNL 66

Query: 69  EVDGAPWRVLEFLHVKPGKGAAFVRTKMRNYVTGNTVEKTFRAGSSLDEANVYKEVKQFT 128
           EVDGAPWRVLEFLHVKPGKGAAFVRTK+RNYVTGNTVEKTFRAGSSL+EANVYKEVKQFT
Sbjct: 67  EVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVTGNTVEKTFRAGSSLEEANVYKEVKQFT 126

Query: 129 YKDGSQFVFMDLNTYEEIRLNEKDVGDRTKWLKEGMDCIVLFWNGKVIDFEVPITIQLAV 188
           YKDGSQFVFMDLNTYEEIRLN  DVGDRTKWLKEGMDC+VLFWNGKVIDFEVPITIQL V
Sbjct: 127 YKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCVVLFWNGKVIDFEVPITIQLTV 186

Query: 189 VDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVIDTRTGQYTSRA 230
           VDVDPGLKGDTAQGGSKPATLETGAVVNVPLF+NVGDSI+IDTRTGQYTSRA
Sbjct: 187 VDVDPGLKGDTAQGGSKPATLETGAVVNVPLFINVGDSIMIDTRTGQYTSRA 238

[Close]

BLAST of Sed0002775 vs. ExPASy TrEMBL
Match: A0A6J1DSR9 (uncharacterized protein LOC111024058 OS=Momordica charantia OX=3673 GN=LOC111024058 PE=3 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 6.6e-104
Identity = 196/232 (84.48%), Postives = 207/232 (89.22%), Query Frame = 0


Query: 9   CNASFASAFI------APSTNLSFKPSLLPIPRL-----RTGFSRIYAFTSNDIKVGSNI 68
           C+AS ASAF+        S +L FKPSLLPI ++     R GFSRIYA +SNDIKVG+N+
Sbjct: 7   CSASSASAFLGRRSSSTTSLSLPFKPSLLPIRQVSLASSRPGFSRIYALSSNDIKVGTNV 66

Query: 69  EVDGAPWRVLEFLHVKPGKGAAFVRTKMRNYVTGNTVEKTFRAGSSLDEANVYKEVKQFT 128
           EVDGAPWRVL  L VKPGKGAAFVRTKMRNYVTGNTVEKTFRAGSSLDEANVYKEVKQFT
Sbjct: 67  EVDGAPWRVLGCLXVKPGKGAAFVRTKMRNYVTGNTVEKTFRAGSSLDEANVYKEVKQFT 126

Query: 129 YKDGSQFVFMDLNTYEEIRLNEKDVGDRTKWLKEGMDCIVLFWNGKVIDFEVPITIQLAV 188
           YKDGSQFVFMDLNTYEEIRLN  DVGDRTKWLKEGMDCIVLFWNGKVIDFEVPIT+QL V
Sbjct: 127 YKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPITVQLTV 186

Query: 189 VDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVIDTRTGQYTSRA 230
           V+VDPGLKGDTAQGGSKPATLETGAVVNVPLF+NVGDSIVIDTRTGQYTSRA
Sbjct: 187 VEVDPGLKGDTAQGGSKPATLETGAVVNVPLFINVGDSIVIDTRTGQYTSRA 238

[Close]

BLAST of Sed0002775 vs. ExPASy TrEMBL
Match: A0A6J1I1D0 (uncharacterized protein LOC111470003 OS=Cucurbita maxima OX=3661 GN=LOC111470003 PE=3 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 8.6e-104
Identity = 197/232 (84.91%), Postives = 206/232 (88.79%), Query Frame = 0


Query: 9   CNASFASAFIA------PSTNLSFKPSLLPIPRL-----RTGFSRIYAFTSNDIKVGSNI 68
           CNAS +SAF+A       S +LS KPS+L   R      RT FSRIYA TSNDIKVG+NI
Sbjct: 7   CNASLSSAFLARRSSSMTSLSLSSKPSVLRTRRFSSANSRTRFSRIYALTSNDIKVGTNI 66

Query: 69  EVDGAPWRVLEFLHVKPGKGAAFVRTKMRNYVTGNTVEKTFRAGSSLDEANVYKEVKQFT 128
           EVDG PWRVLEFLHVKPGKGAAFVRTK+RNYV+GNTVE+TFRAGSSLDEANVYKEVKQFT
Sbjct: 67  EVDGFPWRVLEFLHVKPGKGAAFVRTKIRNYVSGNTVERTFRAGSSLDEANVYKEVKQFT 126

Query: 129 YKDGSQFVFMDLNTYEEIRLNEKDVGDRTKWLKEGMDCIVLFWNGKVIDFEVPITIQLAV 188
           YKDGSQFVFMDLNTYEEIRLN  DVGDRTKWLKEGMDCIVLFWNGKVIDFEVP TIQL V
Sbjct: 127 YKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPNTIQLTV 186

Query: 189 VDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVIDTRTGQYTSRA 230
           VDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIV+DTRTGQYTSRA
Sbjct: 187 VDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVVDTRTGQYTSRA 238

[Close]

BLAST of Sed0002775 vs. TAIR 10
Match: AT3G08740.1 (elongation factor P (EF-P) family protein )

HSP 1 Score: 315.8 bits (808), Expect = 2.8e-86
Identity = 154/236 (65.25%), Postives = 188/236 (79.66%), Query Frame = 0


Query: 1   MAANIVSCCNASFASAFIAPSTNLSFKP-SLLPIPRLRTG-----FSRIY-AFTSNDIKV 60
           MA   +   + S   +   P +  SF   + L +P +R       F RI+ + ++NDIK 
Sbjct: 1   MAGRAIFSVSCSSTPSLCIPYSTASFSSMNRLALPAVRISPRTNRFPRIHCSMSANDIKA 60

Query: 61  GSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKMRNYVTGNTVEKTFRAGSSLDEANVYKEV 120
           G+NIEVDGAPWRVLEFLHVKPGKGAAFVRTK+RNYV G+TVE+TFRAG S++EAN+YKE 
Sbjct: 61  GTNIEVDGAPWRVLEFLHVKPGKGAAFVRTKIRNYVNGSTVERTFRAGISVEEANIYKET 120

Query: 121 KQFTYKDGSQFVFMDLNTYEEIRLNEKDVGDRTKWLKEGMDCIVLFWNGKVIDFEVPITI 180
           KQFTYKDGSQFVFMDL TYEE RLNE D+G++TKWLKEGMDCI+L+W  KVIDF++PIT+
Sbjct: 121 KQFTYKDGSQFVFMDLTTYEETRLNESDMGEKTKWLKEGMDCILLYWKDKVIDFDLPITV 180

Query: 181 QLAVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVIDTRTGQYTSRA 230
           +L VVDVDPGL+GDT QGGSKPAT+ETGA+V VPLF+NVG+ I +DTRTG Y +RA
Sbjct: 181 KLKVVDVDPGLRGDTVQGGSKPATMETGAIVAVPLFINVGEEIFVDTRTGAYMNRA 236

[Close]

BLAST of Sed0002775 vs. TAIR 10
Match: AT4G26310.1 (elongation factor P (EF-P) family protein )

HSP 1 Score: 92.0 bits (227), Expect = 6.5e-19
Identity = 52/180 (28.89%), Postives = 95/180 (52.78%), Query Frame = 0


Query: 51  IKVGSNIEVDGAPWRVLEFLHVKPGKGAAFVRTKMRNYVTGNTVEKTFRAGSSLDEANVY 110
           ++ G+ IE  G  +RV+E  H + G+G A ++ ++R+  TGN +   F +  S+++  V+
Sbjct: 78  LRAGNVIERTGRTFRVVEAEHKQQGRGGASIQVELRDVDTGNKLNLRFGSEESVEK--VF 137

Query: 111 KEVKQFT--YKDGSQFVFMDLNTYEEIRLNEKDVGDRTKWLKEGMDCIVLFWNGKVIDFE 170
            E K FT  Y +G     ++ NT+E++ +     G    +LKE M   +  ++G+ +   
Sbjct: 138 VEEKSFTCLYAEGDTAYLIEPNTFEQVEVPLDIFGKAAVYLKEEMKVQLQLYDGRALSAS 197

Query: 171 VPITIQLAVVDVDPGLKGDTAQGGSKPATLETGAVVNVPLFVNVGDSIVIDTRTGQYTSR 229
           +P  I   VV+    +KG T+    K A L+ G+ + VP ++  G+ IVI+T    +  R
Sbjct: 198 IPKHITCTVVETQLPMKGLTSAPRYKRALLDNGSTIQVPSYLEAGEKIVINTEDDSFVKR 255

The following BLAST results are available for this feature:

BLAST of Sed0002775 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904606.1	1.1e-105	85.78	elongation factor P isoform X1 [Benincasa hispida]	[more]
XP_038904607.1	7.2e-105	85.90	elongation factor P isoform X2 [Benincasa hispida]	[more]
XP_004137675.1	3.6e-104	86.46	uncharacterized protein LOC101222385 [Cucumis sativus]	[more]
XP_023538922.1	3.6e-104	84.98	uncharacterized protein LOC111799706 [Cucurbita pepo subsp. pepo]	[more]
KAE8650971.1	3.6e-104	86.46	hypothetical protein Csa_001935 [Cucumis sativus]	[more]

BLAST of Sed0002775 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B1XKV1	3.0e-61	59.89	Elongation factor P OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) O...	[more]
Q54760	5.1e-61	59.89	Elongation factor P OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=...	[more]
Q5N1T5	5.1e-61	59.89	Elongation factor P OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 14...	[more]
B0JHV3	1.1e-60	57.69	Elongation factor P OS=Microcystis aeruginosa (strain NIES-843) OX=449447 GN=efp...	[more]
B1WNP3	1.5e-57	54.40	Elongation factor P OS=Crocosphaera subtropica (strain ATCC 51142 / BH68) OX=439...	[more]

BLAST of Sed0002775 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LD89	1.7e-104	86.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G728090 PE=3 SV=1	[more]
A0A6J1FIJ6	2.3e-104	84.98	uncharacterized protein LOC111444251 OS=Cucurbita moschata OX=3662 GN=LOC1114442...	[more]
A0A1S3B5F0	5.1e-104	84.05	elongation factor P OS=Cucumis melo OX=3656 GN=LOC103486227 PE=3 SV=1	[more]
A0A6J1DSR9	6.6e-104	84.48	uncharacterized protein LOC111024058 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1I1D0	8.6e-104	84.91	uncharacterized protein LOC111470003 OS=Cucurbita maxima OX=3661 GN=LOC111470003...	[more]

BLAST of Sed0002775 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G08740.1	2.8e-86	65.25	elongation factor P (EF-P) family protein	[more]
AT4G26310.1	6.5e-19	28.89	elongation factor P (EF-P) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001059	Translation elongation factor P/YeiP, central	SMART	SM01185	EFP_2	coord: 111..165 e-value: 3.1E-23 score: 93.2
IPR001059	Translation elongation factor P/YeiP, central	PFAM	PF01132	EFP	coord: 115..165 e-value: 6.9E-22 score: 77.2
IPR001059	Translation elongation factor P/YeiP, central	CDD	cd04470	S1_EF-P_repeat_1	coord: 115..170 e-value: 9.65878E-27 score: 95.9879
IPR015365	Elongation factor P, C-terminal	SMART	SM00841	Elong_fact_P_C_2	coord: 173..228 e-value: 7.9E-31 score: 118.4
IPR015365	Elongation factor P, C-terminal	PFAM	PF09285	Elong-fact-P_C	coord: 173..228 e-value: 6.8E-27 score: 93.0
IPR015365	Elongation factor P, C-terminal	CDD	cd05794	S1_EF-P_repeat_2	coord: 173..228 e-value: 3.46656E-26 score: 94.1278
None	No IPR available	GENE3D	2.40.50.140		coord: 172..229 e-value: 7.6E-26 score: 91.5
None	No IPR available	GENE3D	2.40.50.140		coord: 109..170 e-value: 1.6E-21 score: 78.1
None	No IPR available	PANTHER	PTHR30053:SF12	ELONGATION FACTOR P (EF-P) FAMILY PROTEIN	coord: 18..229
IPR011768	Translation elongation factor P	TIGRFAM	TIGR00038	TIGR00038	coord: 47..229 e-value: 3.9E-73 score: 243.0
IPR011768	Translation elongation factor P	HAMAP	MF_00141	EF_P	coord: 45..229 score: 46.197163
IPR013185	Translation elongation factor, KOW-like	PFAM	PF08207	EFP_N	coord: 48..103 e-value: 9.5E-26 score: 89.6
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 39..107 e-value: 3.1E-27 score: 95.9
IPR020599	Translation elongation factor P/YeiP	PANTHER	PTHR30053	ELONGATION FACTOR P	coord: 18..229
IPR013852	Translation elongation factor P/YeiP, conserved site	PROSITE	PS01275	EFP	coord: 194..213
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 110..173
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 172..229
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 47..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002775.1	Sed0002775.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006414	translational elongation
biological_process	GO:0043043	peptide biosynthetic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003746	translation elongation factor activity