Sed0002750 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAGAGAGTTCAGCTTGGAGCTTGGTCTTTGGCCCCCTTCTTCTAAACCAACCTTCCAATTTTCTGCAATTCCCATGTGAGATAAAAGAAAATTAATAGGCCCTTTTTTTAGATGTTTTTTTTTTTTAGAATTTACCATTACCAGCACATTTTATATCTTGTATTATATTTGTAGCAGAATTCTTAAAATAATTCATGTATAGCACATTTTCTATCATTCAACTAGTGATAAAACTTAATTTGAATTTCTACCACTAATAGAAAATTCAAGTAGTAATAGAATAAGTCTATCATTAATTGAATTTTATCACTTATATAACTCAGATAATGATAAAACTCAATTTAAATTTTCTACTACAAATGAGTTAATTTTGATTTTGTGCTATAAATAAAAATATTTTACCTTGTTCTGCATGCAAAATCCCCCCTTTTTTTCTTTTGAATACTACAATAATATTTGAGTGTCATCATTTTTTTAGTTTCTTAGCTTAGTGTGAAATCAAAATGTATCTAACCTGAACTTAACAATGAGTGAATGGCTGAGAAATGAAGTTTAATCATAATATTCAAAATTGCTGATTATGGTTAGACTTAGCCCACTTAATAGAGCATTTTGTTGTTTTGTTTAGATTTTGATGGAAAGTGAATTTTGGAATTGTGTTTGTGGATGTAGGATAGGAATGCCATTTACTTTGAATCAGCAGCAGCAGATCATAGTTTCTTATAATGGATCACTTTCACTTTGTGACTTCAATGAACTCAAGGTAAATTTTTTTTCCATTTCTTTATTATTCTTTTTTTTTCTCTTTTGTATGAAATTAATGAAGAAAGAAAGTGGTTAAAATGACTACTCTTTCAAGTTTATTTTCTTTTGATCCTAGTACATCTAACTGACCCATGTTAGTTCATGTACTTTGAGTAAAATTTAAAATTGTCTTTTAAAATAAGACAACAATTTCTAATGTATTTATTTTATTTATAACATTTTTTAAAATATATTTTATACAATCACAATTTCATTTGAATGAAACTATTGATGCTACTTTATTAATTCGTTTTTACTATATTTGAATTTTTCCTAAACATCCATAAAAAAAATAATAAAACAAATCCTTTTTTTATCATTCATGAAAAATTTCATAATTTTTAATTTTTATTGAAATCATTTAATGATAACAATGATTTTAATACAAAAAGAACATGATGCGGACGTGTTTTTGATAGAGAACAGTTCAATTCAATTTGAATATGCTTATTGAAATTGGTTTAATAATAACAAAACAAAAAAAAAAGTATACATACACATGCATATACATATACACATAAACGTCATAAGAGTGAAACCTTTTTAACCCTAATTTTAGTAGTTTCTGAATAAATTCTGGAAACACAAAGTACTTAAAAAAGTGAAACCAACTCAGCTCCACAAAAAAATAAAAATAATAATAATAATAATAATAATAATAATAATAAATACAAAGTGATACCAATCCTCTAGTTTAGTGATTCCCTCCCCATTCCTAATTTTAGTGTGTTTTAAAGGATACTAAAACAATGAAAGATTTGTTTGCAAAATTGCAGGCAAGAGCCATATTATGGTGTGCAAACCAAGAGAAGAATAGCAGCAAGAGATGGAGCAACCCAGAATGGTTGAGTTTGCAAATGCCAAACAGTGAGAATGGAAATGCAGCTTATTTCTCCATTCATAAATCTCTCAACAGATTCCTTCAAAGGAGGACAAGAAGAATTCAATCAATGTCTCCATATCACAAATTGTAA ATGGAAAGAGAGTTCAGCTTGGAGCTTGGTCTTTGGCCCCCTTCTTCTAAACCAACCTTCCAATTTTCTGCAATTCCCATGATAGGAATGCCATTTACTTTGAATCAGCAGCAGCAGATCATAGTTTCTTATAATGGATCACTTTCACTTTGTGACTTCAATGAACTCAAGGCAAGAGCCATATTATGGTGTGCAAACCAAGAGAAGAATAGCAGCAAGAGATGGAGCAACCCAGAATGGTTGAGTTTGCAAATGCCAAACAGTGAGAATGGAAATGCAGCTTATTTCTCCATTCATAAATCTCTCAACAGATTCCTTCAAAGGAGGACAAGAAGAATTCAATCAATGTCTCCATATCACAAATTGTAA ATGGAAAGAGAGTTCAGCTTGGAGCTTGGTCTTTGGCCCCCTTCTTCTAAACCAACCTTCCAATTTTCTGCAATTCCCATGATAGGAATGCCATTTACTTTGAATCAGCAGCAGCAGATCATAGTTTCTTATAATGGATCACTTTCACTTTGTGACTTCAATGAACTCAAGGCAAGAGCCATATTATGGTGTGCAAACCAAGAGAAGAATAGCAGCAAGAGATGGAGCAACCCAGAATGGTTGAGTTTGCAAATGCCAAACAGTGAGAATGGAAATGCAGCTTATTTCTCCATTCATAAATCTCTCAACAGATTCCTTCAAAGGAGGACAAGAAGAATTCAATCAATGTCTCCATATCACAAATTGTAA MEREFSLELGLWPPSSKPTFQFSAIPMIGMPFTLNQQQQIIVSYNGSLSLCDFNELKARAILWCANQEKNSSKRWSNPEWLSLQMPNSENGNAAYFSIHKSLNRFLQRRTRRIQSMSPYHKL Homology
BLAST of Sed0002750 vs. NCBI nr
Match: XP_008451847.1 (PREDICTED: uncharacterized protein LOC103493010 [Cucumis melo] >TYK16421.1 protein TIFY 5A-like [Cucumis melo var. makuwa]) HSP 1 Score: 166.4 bits (420), Expect = 1.5e-37 Identity = 88/127 (69.29%), Postives = 103/127 (81.10%), Query Frame = 0
BLAST of Sed0002750 vs. NCBI nr
Match: KAG6577084.1 (Protein TIFY 5A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015093.1 Protein TIFY 5A, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 165.2 bits (417), Expect = 3.4e-37 Identity = 93/129 (72.09%), Postives = 105/129 (81.40%), Query Frame = 0
BLAST of Sed0002750 vs. NCBI nr
Match: KAA0062921.1 (protein TIFY 5A-like [Cucumis melo var. makuwa]) HSP 1 Score: 164.5 bits (415), Expect = 5.9e-37 Identity = 87/127 (68.50%), Postives = 103/127 (81.10%), Query Frame = 0
BLAST of Sed0002750 vs. NCBI nr
Match: XP_022984285.1 (uncharacterized protein LOC111482635 [Cucurbita maxima]) HSP 1 Score: 164.5 bits (415), Expect = 5.9e-37 Identity = 92/134 (68.66%), Postives = 105/134 (78.36%), Query Frame = 0
BLAST of Sed0002750 vs. NCBI nr
Match: XP_022931286.1 (uncharacterized protein LOC111437514 [Cucurbita moschata]) HSP 1 Score: 163.3 bits (412), Expect = 1.3e-36 Identity = 92/129 (71.32%), Postives = 105/129 (81.40%), Query Frame = 0
BLAST of Sed0002750 vs. ExPASy Swiss-Prot
Match: Q8LBM2 (Protein TIFY 5A OS=Arabidopsis thaliana OX=3702 GN=TIFY5A PE=1 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 5.6e-06 Identity = 43/127 (33.86%), Postives = 63/127 (49.61%), Query Frame = 0
BLAST of Sed0002750 vs. ExPASy TrEMBL
Match: A0A5D3CWX6 (Protein TIFY 5A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G002170 PE=3 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 7.5e-38 Identity = 88/127 (69.29%), Postives = 103/127 (81.10%), Query Frame = 0
BLAST of Sed0002750 vs. ExPASy TrEMBL
Match: A0A1S3BSH9 (uncharacterized protein LOC103493010 OS=Cucumis melo OX=3656 GN=LOC103493010 PE=3 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 7.5e-38 Identity = 88/127 (69.29%), Postives = 103/127 (81.10%), Query Frame = 0
BLAST of Sed0002750 vs. ExPASy TrEMBL
Match: A0A6J1J887 (uncharacterized protein LOC111482635 OS=Cucurbita maxima OX=3661 GN=LOC111482635 PE=3 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 2.8e-37 Identity = 92/134 (68.66%), Postives = 105/134 (78.36%), Query Frame = 0
BLAST of Sed0002750 vs. ExPASy TrEMBL
Match: A0A5A7VB54 (Protein TIFY 5A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G00130 PE=3 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 2.8e-37 Identity = 87/127 (68.50%), Postives = 103/127 (81.10%), Query Frame = 0
BLAST of Sed0002750 vs. ExPASy TrEMBL
Match: A0A6J1ET94 (uncharacterized protein LOC111437514 OS=Cucurbita moschata OX=3662 GN=LOC111437514 PE=3 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 6.3e-37 Identity = 92/129 (71.32%), Postives = 105/129 (81.40%), Query Frame = 0
BLAST of Sed0002750 vs. TAIR 10
Match: AT1G30135.1 (jasmonate-zim-domain protein 8 ) HSP 1 Score: 52.0 bits (123), Expect = 4.0e-07 Identity = 43/127 (33.86%), Postives = 63/127 (49.61%), Query Frame = 0
BLAST of Sed0002750 vs. TAIR 10
Match: AT2G34600.1 (jasmonate-zim-domain protein 7 ) HSP 1 Score: 44.3 bits (103), Expect = 8.3e-05 Identity = 44/130 (33.85%), Postives = 65/130 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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