Sed0002737 (gene) Chayote v1

Overview


Name	Sed0002737
Type	gene
Organism	Sechium edule (Chayote v1)
Description	ULP_PROTEASE domain-containing protein
Location	LG09: 28344661 .. 28345605 (-)
RNA-Seq Expression	Sed0002737
Synteny	Sed0002737

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGATCTACCAGAAGGTTTGAATTCTATCTTTCGCCATGCAGAGTCGATAATGAAAACTAACAATAGTATCTCCATGCAACTTCCTGAGGGGCTCTTCGGTACAAGTCGCAAGAGTTGTGTATTAATAGACGATATTATTGACTTTTGCAATATGAAAGAAGTAAAAACATTATCATTGGTGGCTTATATGGCGTAAGAAATTTTTTCCTTCTTTTCTTTATCATATTAAATTATAATAGACTTTTTTTTAAAAGAAAATTAACTATCATCTTAATCTTTGTAGGTATTGTACTCATATTGCGTTGATTCAGGGCGAGCTCAAAAGTATATTTTCTTGGATCCGTCTTTAATATCGTTTGGTCAATACACATCGAAAATTAGAACACATAATCTTTGTTCGAGACTGACGACTGCAAGAAAAGATCAATTGGTTGTTGCTCCATATAATCCTGGGTGAGTAAAAGTTTATTCATTACAAACATAGTTTATCACTTAATTACTTTTAGTTTGATAATCTAGCACTTGTGGATTTTTGTTTAGTGGTCATTGGTCACTGCTCATTGTGAATCCGTACGAAGATATTGTTTATCATTTAGATTCATTACGTACAAATTCAAAAGTAGATATCAAGTATGTAACATGCACGTAAGTTCTGTTTTCACTTTGAATATGTTGTCTATTCATTTTGGTTGTTTTATTTTTTTCTTTTTTAATATGCTAAGTATTTATGTAGGGCACTTGCAATATTTCAAGCTTAGAAAAAAATAAAAGTGGATAGAAATAAAACATTATGGAAAAATGTTAAGGCAAGTATAATAATTTTTTCTTTTTCTTATTTTCATTTTTTTTCTTTTTAATTTGTTTGTGAAAATAAAAGTGTTCTCTTTGTTTTTGTAGTGTCCATTACAATCAAGTACAGTGGAATGTGGGTATTATGTAA

mRNA sequence

ATGTTGGATCTACCAGAAGGTTTGAATTCTATCTTTCGCCATGCAGAGTCGATAATGAAAACTAACAATAGTATCTCCATGCAACTTCCTGAGGGGCTCTTCGGTACAAGTCGCAAGAGTTGTGTATTAATAGACGATATTATTGACTTTTGCAATATGAAAGAATATATTTTCTTGGATCCGTCTTTAATATCGTTTGGTCAATACACATCGAAAATTAGAACACATAATCTTTGTTCGAGACTGACGACTGCAAGAAAAGATCAATTGGTTGTTGCTCCATATAATCCTGGTGGTCATTGGTCACTGCTCATTGTGAATCCGTACGAAGATATTGTTTATCATTTAGATTCATTACGTACAAATTCAAAAGTAGATATCAAGTATGTAACATGCACTGTCCATTACAATCAAGTACAGTGGAATGTGGGTATTATGTAA

Coding sequence (CDS)

ATGTTGGATCTACCAGAAGGTTTGAATTCTATCTTTCGCCATGCAGAGTCGATAATGAAAACTAACAATAGTATCTCCATGCAACTTCCTGAGGGGCTCTTCGGTACAAGTCGCAAGAGTTGTGTATTAATAGACGATATTATTGACTTTTGCAATATGAAAGAATATATTTTCTTGGATCCGTCTTTAATATCGTTTGGTCAATACACATCGAAAATTAGAACACATAATCTTTGTTCGAGACTGACGACTGCAAGAAAAGATCAATTGGTTGTTGCTCCATATAATCCTGGTGGTCATTGGTCACTGCTCATTGTGAATCCGTACGAAGATATTGTTTATCATTTAGATTCATTACGTACAAATTCAAAAGTAGATATCAAGTATGTAACATGCACTGTCCATTACAATCAAGTACAGTGGAATGTGGGTATTATGTAA

Protein sequence

MLDLPEGLNSIFRHAESIMKTNNSISMQLPEGLFGTSRKSCVLIDDIIDFCNMKEYIFLDPSLISFGQYTSKIRTHNLCSRLTTARKDQLVVAPYNPGGHWSLLIVNPYEDIVYHLDSLRTNSKVDIKYVTCTVHYNQVQWNVGIM

Homology

[Close]

BLAST of Sed0002737 vs. NCBI nr
Match: KAA0046260.1 (hypothetical protein E6C27_scaffold284G00640 [Cucumis melo var. makuwa])

HSP 1 Score: 167.2 bits (422), Expect = 1.1e-37
Identity = 85/154 (55.19%), Postives = 105/154 (68.18%), Query Frame = 0


Query: 3   DLPEGLNSIFRHAESIMKTNNSISMQLPEGLFGTSRKSCVLIDDIIDFCNMK-------- 62
           +LP  L  I R+AE+IM   +S S QLP  LFG SRKS VL +D+IDFCNM+        
Sbjct: 548 NLPIQLKYILRYAETIMVDGSSFSFQLPLELFGISRKSYVLREDVIDFCNMQKVKTLSMV 607

Query: 63  -----------------EYIFLDPSLISFGQYTSKIRTHNLCSRLTTARKDQLVVAPYNP 122
                            +Y+F+DPSLIS G  T +IR  NLCSRL T+++DQLVVAPYNP
Sbjct: 608 AYITYLYSLIIDLKKVSKYVFVDPSLISAGHSTREIRARNLCSRLMTSKQDQLVVAPYNP 667

Query: 123 GGHWSLLIVNPYEDIVYHLDSLRTNSKVDIKYVT 132
           G HWSL+I+NPY+D+VYHLDSLRT+S+ DIKYVT
Sbjct: 668 GDHWSLVIINPYDDLVYHLDSLRTSSRDDIKYVT 701

[Close]

BLAST of Sed0002737 vs. NCBI nr
Match: KAA0032194.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 166.8 bits (421), Expect = 1.4e-37
Identity = 85/154 (55.19%), Postives = 104/154 (67.53%), Query Frame = 0


Query: 3   DLPEGLNSIFRHAESIMKTNNSISMQLPEGLFGTSRKSCVLIDDIIDFCNMK-------- 62
           +LP  L  I R+AE +M   +S S QLP  LFG SRKS VL +D+IDFCNM+        
Sbjct: 655 NLPIQLKYILRYAERVMVDGSSFSFQLPLELFGISRKSYVLREDVIDFCNMQKVKTLSMV 714

Query: 63  -----------------EYIFLDPSLISFGQYTSKIRTHNLCSRLTTARKDQLVVAPYNP 122
                            +YIF+DPSLIS G  T +IR  NLCSRL T+++DQLVVAPYNP
Sbjct: 715 AYITYLYSLIIDLKKVSKYIFVDPSLISAGHSTREIRARNLCSRLMTSKQDQLVVAPYNP 774

Query: 123 GGHWSLLIVNPYEDIVYHLDSLRTNSKVDIKYVT 132
           G HWSL+I+NPY+D+VYHLDSLRT+S+ DIKYVT
Sbjct: 775 GDHWSLVIINPYDDVVYHLDSLRTSSRDDIKYVT 808

[Close]

BLAST of Sed0002737 vs. NCBI nr
Match: TYK01269.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 166.4 bits (420), Expect = 1.8e-37
Identity = 84/154 (54.55%), Postives = 104/154 (67.53%), Query Frame = 0


Query: 3   DLPEGLNSIFRHAESIMKTNNSISMQLPEGLFGTSRKSCVLIDDIIDFCNMK-------- 62
           +LP  L  I R+AE +M   +S S QLP  LFG SRKS VL +D+IDFCNM+        
Sbjct: 210 NLPIQLKYILRYAERVMVDGSSFSFQLPLELFGISRKSYVLREDVIDFCNMQKVKTLSMV 269

Query: 63  -----------------EYIFLDPSLISFGQYTSKIRTHNLCSRLTTARKDQLVVAPYNP 122
                            +Y+F+DPSLIS G  T +IR  NLCSRL T+++DQLVVAPYNP
Sbjct: 270 AYITYLYSLIIDLKKVSKYVFVDPSLISAGHSTREIRARNLCSRLMTSKQDQLVVAPYNP 329

Query: 123 GGHWSLLIVNPYEDIVYHLDSLRTNSKVDIKYVT 132
           G HWSL+I+NPY+D+VYHLDSLRT+S+ DIKYVT
Sbjct: 330 GDHWSLVIINPYDDVVYHLDSLRTSSRDDIKYVT 363

[Close]

BLAST of Sed0002737 vs. NCBI nr
Match: TYK22869.1 (hypothetical protein E5676_scaffold334G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 166.4 bits (420), Expect = 1.8e-37
Identity = 84/154 (54.55%), Postives = 104/154 (67.53%), Query Frame = 0


Query: 3    DLPEGLNSIFRHAESIMKTNNSISMQLPEGLFGTSRKSCVLIDDIIDFCNMK-------- 62
            +LP  L  I R+AE +M   +S S QLP  LFG SRKS VL +D+IDFCNM+        
Sbjct: 1324 NLPIQLKYILRYAERVMVDGSSFSFQLPLELFGISRKSYVLREDVIDFCNMQKVKTLSMV 1383

Query: 63   -----------------EYIFLDPSLISFGQYTSKIRTHNLCSRLTTARKDQLVVAPYNP 122
                             +Y+F+DPSLIS G  T +IR  NLCSRL T+++DQLVVAPYNP
Sbjct: 1384 AYITYLYSLIIDLKKVSKYVFVDPSLISAGHSTREIRARNLCSRLMTSKQDQLVVAPYNP 1443

Query: 123  GGHWSLLIVNPYEDIVYHLDSLRTNSKVDIKYVT 132
            G HWSL+I+NPY+D+VYHLDSLRT+S+ DIKYVT
Sbjct: 1444 GDHWSLVIINPYDDVVYHLDSLRTSSRDDIKYVT 1477

[Close]

BLAST of Sed0002737 vs. NCBI nr
Match: TYK18940.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 166.4 bits (420), Expect = 1.8e-37
Identity = 84/154 (54.55%), Postives = 104/154 (67.53%), Query Frame = 0


Query: 3    DLPEGLNSIFRHAESIMKTNNSISMQLPEGLFGTSRKSCVLIDDIIDFCNMK-------- 62
            +LP  L  I R+AE +M   +S S QLP  LFG SRKS VL +D+IDFCNM+        
Sbjct: 1327 NLPIQLKYILRYAERVMVDGSSFSFQLPLELFGISRKSYVLREDVIDFCNMQKVKTLSMV 1386

Query: 63   -----------------EYIFLDPSLISFGQYTSKIRTHNLCSRLTTARKDQLVVAPYNP 122
                             +Y+F+DPSLIS G  T +IR  NLCSRL T+++DQLVVAPYNP
Sbjct: 1387 AYITYLYSLIIDLKKVSKYVFVDPSLISAGHSTREIRARNLCSRLMTSKQDQLVVAPYNP 1446

Query: 123  GGHWSLLIVNPYEDIVYHLDSLRTNSKVDIKYVT 132
            G HWSL+I+NPY+D+VYHLDSLRT+S+ DIKYVT
Sbjct: 1447 GDHWSLVIINPYDDVVYHLDSLRTSSRDDIKYVT 1480

[Close]

BLAST of Sed0002737 vs. ExPASy TrEMBL
Match: A0A5A7TSY7 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00640 PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 5.2e-38
Identity = 85/154 (55.19%), Postives = 105/154 (68.18%), Query Frame = 0


Query: 3   DLPEGLNSIFRHAESIMKTNNSISMQLPEGLFGTSRKSCVLIDDIIDFCNMK-------- 62
           +LP  L  I R+AE+IM   +S S QLP  LFG SRKS VL +D+IDFCNM+        
Sbjct: 548 NLPIQLKYILRYAETIMVDGSSFSFQLPLELFGISRKSYVLREDVIDFCNMQKVKTLSMV 607

Query: 63  -----------------EYIFLDPSLISFGQYTSKIRTHNLCSRLTTARKDQLVVAPYNP 122
                            +Y+F+DPSLIS G  T +IR  NLCSRL T+++DQLVVAPYNP
Sbjct: 608 AYITYLYSLIIDLKKVSKYVFVDPSLISAGHSTREIRARNLCSRLMTSKQDQLVVAPYNP 667

Query: 123 GGHWSLLIVNPYEDIVYHLDSLRTNSKVDIKYVT 132
           G HWSL+I+NPY+D+VYHLDSLRT+S+ DIKYVT
Sbjct: 668 GDHWSLVIINPYDDLVYHLDSLRTSSRDDIKYVT 701

[Close]

BLAST of Sed0002737 vs. ExPASy TrEMBL
Match: A0A5A7SLX6 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold452G001270 PE=3 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 6.9e-38
Identity = 85/154 (55.19%), Postives = 104/154 (67.53%), Query Frame = 0


Query: 3   DLPEGLNSIFRHAESIMKTNNSISMQLPEGLFGTSRKSCVLIDDIIDFCNMK-------- 62
           +LP  L  I R+AE +M   +S S QLP  LFG SRKS VL +D+IDFCNM+        
Sbjct: 655 NLPIQLKYILRYAERVMVDGSSFSFQLPLELFGISRKSYVLREDVIDFCNMQKVKTLSMV 714

Query: 63  -----------------EYIFLDPSLISFGQYTSKIRTHNLCSRLTTARKDQLVVAPYNP 122
                            +YIF+DPSLIS G  T +IR  NLCSRL T+++DQLVVAPYNP
Sbjct: 715 AYITYLYSLIIDLKKVSKYIFVDPSLISAGHSTREIRARNLCSRLMTSKQDQLVVAPYNP 774

Query: 123 GGHWSLLIVNPYEDIVYHLDSLRTNSKVDIKYVT 132
           G HWSL+I+NPY+D+VYHLDSLRT+S+ DIKYVT
Sbjct: 775 GDHWSLVIINPYDDVVYHLDSLRTSSRDDIKYVT 808

[Close]

BLAST of Sed0002737 vs. ExPASy TrEMBL
Match: A0A5D3DFW8 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold530G00510 PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 9.0e-38
Identity = 84/154 (54.55%), Postives = 104/154 (67.53%), Query Frame = 0


Query: 3    DLPEGLNSIFRHAESIMKTNNSISMQLPEGLFGTSRKSCVLIDDIIDFCNMK-------- 62
            +LP  L  I R+AE +M   +S S QLP  LFG SRKS VL +D+IDFCNM+        
Sbjct: 857  NLPIQLKYILRYAERVMVDGSSFSFQLPLELFGISRKSYVLREDVIDFCNMQKVKTLSMV 916

Query: 63   -----------------EYIFLDPSLISFGQYTSKIRTHNLCSRLTTARKDQLVVAPYNP 122
                             +Y+F+DPSLIS G  T +IR  NLCSRL T+++DQLVVAPYNP
Sbjct: 917  AYITYLYSLIIDLKKVSKYVFVDPSLISAGHSTREIRARNLCSRLMTSKQDQLVVAPYNP 976

Query: 123  GGHWSLLIVNPYEDIVYHLDSLRTNSKVDIKYVT 132
            G HWSL+I+NPY+D+VYHLDSLRT+S+ DIKYVT
Sbjct: 977  GDHWSLVIINPYDDVVYHLDSLRTSSRDDIKYVT 1010

[Close]

BLAST of Sed0002737 vs. ExPASy TrEMBL
Match: A0A5D3D5Z2 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold418G00230 PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 9.0e-38
Identity = 84/154 (54.55%), Postives = 104/154 (67.53%), Query Frame = 0


Query: 3    DLPEGLNSIFRHAESIMKTNNSISMQLPEGLFGTSRKSCVLIDDIIDFCNMK-------- 62
            +LP  L  I R+AE +M   +S S QLP  LFG SRKS VL +D+IDFCNM+        
Sbjct: 1327 NLPIQLKYILRYAERVMVDGSSFSFQLPLELFGISRKSYVLREDVIDFCNMQKVKTLSMV 1386

Query: 63   -----------------EYIFLDPSLISFGQYTSKIRTHNLCSRLTTARKDQLVVAPYNP 122
                             +Y+F+DPSLIS G  T +IR  NLCSRL T+++DQLVVAPYNP
Sbjct: 1387 AYITYLYSLIIDLKKVSKYVFVDPSLISAGHSTREIRARNLCSRLMTSKQDQLVVAPYNP 1446

Query: 123  GGHWSLLIVNPYEDIVYHLDSLRTNSKVDIKYVT 132
            G HWSL+I+NPY+D+VYHLDSLRT+S+ DIKYVT
Sbjct: 1447 GDHWSLVIINPYDDVVYHLDSLRTSSRDDIKYVT 1480

[Close]

BLAST of Sed0002737 vs. ExPASy TrEMBL
Match: A0A5D3DHZ4 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold334G00040 PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 9.0e-38
Identity = 84/154 (54.55%), Postives = 104/154 (67.53%), Query Frame = 0


Query: 3    DLPEGLNSIFRHAESIMKTNNSISMQLPEGLFGTSRKSCVLIDDIIDFCNMK-------- 62
            +LP  L  I R+AE +M   +S S QLP  LFG SRKS VL +D+IDFCNM+        
Sbjct: 1324 NLPIQLKYILRYAERVMVDGSSFSFQLPLELFGISRKSYVLREDVIDFCNMQKVKTLSMV 1383

Query: 63   -----------------EYIFLDPSLISFGQYTSKIRTHNLCSRLTTARKDQLVVAPYNP 122
                             +Y+F+DPSLIS G  T +IR  NLCSRL T+++DQLVVAPYNP
Sbjct: 1384 AYITYLYSLIIDLKKVSKYVFVDPSLISAGHSTREIRARNLCSRLMTSKQDQLVVAPYNP 1443

Query: 123  GGHWSLLIVNPYEDIVYHLDSLRTNSKVDIKYVT 132
            G HWSL+I+NPY+D+VYHLDSLRT+S+ DIKYVT
Sbjct: 1444 GDHWSLVIINPYDDVVYHLDSLRTSSRDDIKYVT 1477

The following BLAST results are available for this feature:

BLAST of Sed0002737 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046260.1	1.1e-37	55.19	hypothetical protein E6C27_scaffold284G00640 [Cucumis melo var. makuwa]	[more]
KAA0032194.1	1.4e-37	55.19	transposase [Cucumis melo var. makuwa]	[more]
TYK01269.1	1.8e-37	54.55	transposase [Cucumis melo var. makuwa]	[more]
TYK22869.1	1.8e-37	54.55	hypothetical protein E5676_scaffold334G00040 [Cucumis melo var. makuwa]	[more]
TYK18940.1	1.8e-37	54.55	transposase [Cucumis melo var. makuwa]	[more]

BLAST of Sed0002737 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0002737 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TSY7	5.2e-38	55.19	ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5A7SLX6	6.9e-38	55.19	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold452G001270 P...	[more]
A0A5D3DFW8	9.0e-38	54.55	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold530G00510 PE...	[more]
A0A5D3D5Z2	9.0e-38	54.55	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold418G00230 PE...	[more]
A0A5D3DHZ4	9.0e-38	54.55	ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of Sed0002737 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003653	Ulp1 protease family, C-terminal catalytic domain	PFAM	PF02902	Peptidase_C48	coord: 87..126 e-value: 1.5E-4 score: 21.7
None	No IPR available	GENE3D	3.40.395.10	Adenoviral Proteinase; Chain A	coord: 7..143 e-value: 1.7E-7 score: 32.8
IPR038765	Papain-like cysteine peptidase superfamily	SUPERFAMILY	54001	Cysteine proteinases	coord: 43..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002737.1	Sed0002737.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity