![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Sed0002731 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAATGGCTCCTTCTTTAGTAATATTATATGAGCAAATGCGAACCAAAATATGTTATTGCTATGGGAGCCTGTACAATTACAGAGAGGGATGTTGATCTGGATTCGATTTATAGTCTTGTTCGGGAGTCGATAAGTTAATTCTCGTCGATGTGTATTTGCCGGGTGTCCACCTAAACCCGAGGTCGTTATAGATGCTATAACAAAACTTCGTAAGAAAATCTCTCGAGAAATCTATGAAGATCGAATTAAGTCTCAAGAGGAGAATCGGTGTTTTACTACCAACCATAAATTTCATGTTGGCCCAAGTACTCATCTTTGGAAATTACGATCAAGGATTACTCTATCAACCATCATCTACTTGAGAGATCATCCCTCCTGAAACTTTTTCAAATACAAAAGTACAGTATCTTCCTACGAATTAGTGAAGTAGGCGAGTATACTTTTTGTGAGAATAACAAAGAACGAGTGAATCTTGATAAATTTTGCATTGTAAATGAGAAATACTTATACAAAAAAATAAAAATAAAATGGGGGAAAAAAGATGCGAGTCGTTTGTCTTCGTGGCTCGTCAAACATGGGTGGTTCATAGATCTTTGGGTTTCGATTACCAAGGAATAGAGACTTTACAAATAAAGCTCGAGGAGTGGCATTCCATTGCAGTCATTTTATATGTATACGGTTACACTTATCTACGTTCCCAATGTGCTTATGATGTAGTAGCCCCCCGGATCTGTTAGCTAGTGTGTATCATCTTACGAGAATCGAGTATGGTATAGATCACCAGGAAGAGGTATGCATAAAAGTATTTGCCCCAAGGATAAATCCTAGAATTAAAATCATTTTTTCTGGTTTGGAAAAGTGCAGATTTTCCAGAAAGGGAATCTTATGATATGTTGGGAATTTCTTATGATAATCATCCACGTCTAAAGCGTATCTTAATGCCTGAAAGTTGGGTAGGATGA ATGAAAATGGCTCCTTCTTTAGTAATATTATATGAGCAAATGCGAACCAAAATATGTTATTGCTATGGGAGCCTGTACAATTACAGAGAGGGATTTAATTCTCGTCGATGTGTATTTGCCGGGTGTCCACCTAAACCCGAGGTCGTTATAGATGCTATAACAAAACTTCGTAAGAAAATCTCTCGAGAAATCTATGAAGATCGAATTAAGTCTCAAGAGGAGAATCGATCTTTGGGTTTCGATTACCAAGGAATAGAGACTTTACAAATAAAGCTCGAGGAGTGGCATTCCATTGCAGTCATTTTATATGTATACGGTTACACTTATCTACGTTCCCAATGTGCTTATGATGTAGTAGCCCCCCGGATCTGTTATGCAGATTTTCCAGAAAGGGAATCTTATGATATGTTGGGAATTTCTTATGATAATCATCCACGTCTAAAGCGTATCTTAATGCCTGAAAGTTGGGTAGGATGA ATGAAAATGGCTCCTTCTTTAGTAATATTATATGAGCAAATGCGAACCAAAATATGTTATTGCTATGGGAGCCTGTACAATTACAGAGAGGGATTTAATTCTCGTCGATGTGTATTTGCCGGGTGTCCACCTAAACCCGAGGTCGTTATAGATGCTATAACAAAACTTCGTAAGAAAATCTCTCGAGAAATCTATGAAGATCGAATTAAGTCTCAAGAGGAGAATCGATCTTTGGGTTTCGATTACCAAGGAATAGAGACTTTACAAATAAAGCTCGAGGAGTGGCATTCCATTGCAGTCATTTTATATGTATACGGTTACACTTATCTACGTTCCCAATGTGCTTATGATGTAGTAGCCCCCCGGATCTGTTATGCAGATTTTCCAGAAAGGGAATCTTATGATATGTTGGGAATTTCTTATGATAATCATCCACGTCTAAAGCGTATCTTAATGCCTGAAAGTTGGGTAGGATGA MKMAPSLVILYEQMRTKICYCYGSLYNYREGFNSRRCVFAGCPPKPEVVIDAITKLRKKISREIYEDRIKSQEENRSLGFDYQGIETLQIKLEEWHSIAVILYVYGYTYLRSQCAYDVVAPRICYADFPERESYDMLGISYDNHPRLKRILMPESWVG Homology
BLAST of Sed0002731 vs. NCBI nr
Match: RYR42400.1 (hypothetical protein Ahy_A08g038873 [Arachis hypogaea]) HSP 1 Score: 187.6 bits (475), Expect = 8.4e-44 Identity = 114/214 (53.27%), Postives = 126/214 (58.88%), Query Frame = 0
BLAST of Sed0002731 vs. NCBI nr
Match: QCE13737.1 (NADH dehydrogenase I subunit K [Vigna unguiculata]) HSP 1 Score: 185.7 bits (470), Expect = 3.2e-43 Identity = 122/264 (46.21%), Postives = 133/264 (50.38%), Query Frame = 0
BLAST of Sed0002731 vs. NCBI nr
Match: KAF2530678.1 (hypothetical protein F2Q70_00030241 [Brassica cretica]) HSP 1 Score: 184.1 bits (466), Expect = 9.3e-43 Identity = 112/235 (47.66%), Postives = 130/235 (55.32%), Query Frame = 0
BLAST of Sed0002731 vs. NCBI nr
Match: KAF3485482.1 (hypothetical protein F2Q69_00053518 [Brassica cretica]) HSP 1 Score: 183.3 bits (464), Expect = 1.6e-42 Identity = 114/235 (48.51%), Postives = 129/235 (54.89%), Query Frame = 0
BLAST of Sed0002731 vs. NCBI nr
Match: VDD65813.1 (unnamed protein product [Brassica oleracea] >VDD65875.1 unnamed protein product [Brassica oleracea]) HSP 1 Score: 182.2 bits (461), Expect = 3.5e-42 Identity = 112/233 (48.07%), Postives = 128/233 (54.94%), Query Frame = 0
BLAST of Sed0002731 vs. ExPASy Swiss-Prot
Match: Q4VZH2 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhJ PE=3 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 7.7e-32 Identity = 76/124 (61.29%), Postives = 78/124 (62.90%), Query Frame = 0
BLAST of Sed0002731 vs. ExPASy Swiss-Prot
Match: B0Z4L4 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Oenothera argillicola OX=3940 GN=ndhJ PE=3 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 3.8e-31 Identity = 73/124 (58.87%), Postives = 76/124 (61.29%), Query Frame = 0
BLAST of Sed0002731 vs. ExPASy Swiss-Prot
Match: B0Z4U8 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Oenothera biennis OX=3942 GN=ndhJ PE=3 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 3.8e-31 Identity = 73/124 (58.87%), Postives = 76/124 (61.29%), Query Frame = 0
BLAST of Sed0002731 vs. ExPASy Swiss-Prot
Match: Q9MTP3 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Oenothera elata subsp. hookeri OX=85636 GN=ndhJ PE=3 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 3.8e-31 Identity = 73/124 (58.87%), Postives = 76/124 (61.29%), Query Frame = 0
BLAST of Sed0002731 vs. ExPASy Swiss-Prot
Match: B0Z532 (NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Oenothera glazioviana OX=482428 GN=ndhJ PE=3 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 3.8e-31 Identity = 73/124 (58.87%), Postives = 76/124 (61.29%), Query Frame = 0
BLAST of Sed0002731 vs. ExPASy TrEMBL
Match: A0A445BUL8 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A08g038873 PE=3 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 4.1e-44 Identity = 114/214 (53.27%), Postives = 126/214 (58.88%), Query Frame = 0
BLAST of Sed0002731 vs. ExPASy TrEMBL
Match: A0A4D6NPI7 (NADH dehydrogenase I subunit K OS=Vigna unguiculata OX=3917 GN=DEO72_LG11g733 PE=3 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 1.5e-43 Identity = 122/264 (46.21%), Postives = 133/264 (50.38%), Query Frame = 0
BLAST of Sed0002731 vs. ExPASy TrEMBL
Match: A0A0D3CFT9 (Uncharacterized protein OS=Brassica oleracea var. oleracea OX=109376 PE=3 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 1.7e-42 Identity = 112/233 (48.07%), Postives = 128/233 (54.94%), Query Frame = 0
BLAST of Sed0002731 vs. ExPASy TrEMBL
Match: A0A3P6G4H7 (Uncharacterized protein OS=Brassica oleracea OX=3712 GN=BOLSC46T61041H PE=3 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 1.7e-42 Identity = 112/233 (48.07%), Postives = 128/233 (54.94%), Query Frame = 0
BLAST of Sed0002731 vs. ExPASy TrEMBL
Match: A0A4D6M607 (NADH dehydrogenase I subunit J OS=Vigna unguiculata OX=3917 GN=DEO72_LG6g619 PE=3 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 1.1e-41 Identity = 97/163 (59.51%), Postives = 107/163 (65.64%), Query Frame = 0
BLAST of Sed0002731 vs. TAIR 10
Match: ATCG00420.1 (NADH dehydrogenase subunit J ) HSP 1 Score: 132.1 bits (331), Expect = 3.9e-31 Identity = 70/124 (56.45%), Postives = 76/124 (61.29%), Query Frame = 0
BLAST of Sed0002731 vs. TAIR 10
Match: ATCG00430.1 (photosystem II reaction center protein G ) HSP 1 Score: 75.5 bits (184), Expect = 4.3e-14 Identity = 46/92 (50.00%), Postives = 57/92 (61.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|