Sed0002718 (gene) Chayote v1

Overview


Name	Sed0002718
Type	gene
Organism	Sechium edule (Chayote v1)
Description	vesicle transport protein GOT1-like
Location	LG12: 3879999 .. 3884374 (+)
RNA-Seq Expression	Sed0002718
Synteny	Sed0002718

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCATTGCTGTGTCTGCACTTCAGGTTTCTATGATCGTTCATCAATTCTTCCATTCTTCTTGTTTTGATTCCATTTTCGTTGCATTAGATCCATAATCGCCCTGCAATTTGCCTCTCTCTTTTGCTCATTGTAAATCTCTATCTCTTTTGTTTCACGTTTTTTTCTCACATTCGTCCTCAAAAACCTTATGATTCCCTGTTCTGTTTGATTGATTGATTGATCGATTCAAATTCATCTAGATCTTCTTCGATTTCTTCACAATTTGTTACGCTAACCTTACGATTTTTGCAGTGAACGGCTGGGAGGTGAATTTCTAGTGTCCGCAGATATGGTTTCCTTCGAAATGAATGATCGCAAGAGTAAGTTTAGTCATGTAGAGTGGATCTGTTTCTCGTTTGAAGTAATTTGCTGCTGATTTTGTTTAGGTTGCTTGATTTTTGCAATGTTATCGTTTTGTCGTTTATTAATTAGAAAGTTTGGAGCAAAACACTGGAAATTAGGGTTCAGTTTGGTGAATCTGGCGTTGGTAATGGCATTGCGATGGCGTTTTTAATCTAGTATTTTTTGCTTCTCGTCGGTCTGTGTTGATTTTTTTGAAAAATGACATTATAGGAATTCGTATTTGTATCGTGTTCTTTCATAGATTGTTTTGACACATATTGAATTCTGTGTGTTCTTTTGACTTTTGTGTTGTCCACTTTGACAATATTCATGTATGAAGGAGTGCCGTTATCGTTTTGTCATAGACGAGAAGTAATTTGCTGCTGATTTTGGTTAGGTCGCTTGATTTTTGCAATATTATCGTTTTTTCATTTATTAATTAGAAAGTTTGGAACAAAACACTGGCAATTAGGGTTGAATTTGGTGAATCTGGCATTGGCAATGGCCTTGCAACGGCGTTGTTCATCTAGTACTTTTGCTTTTCGTCTGTCTGTGTTGGCTTTTTTGGAATTGAAACTGTGTTCAAATAGCATTACGGGAATTCGTATCGTGTTCAGTCATAGATTGCGTTGACACATATTGCATGCTGTGTGTTATATTGATTTTTGTGTTGTCTACTTCGACTATATTCATGTATGAATGAGTGCAGTTATGTGGTGTTTTCTGATTGGTTTATCTCTTGTATGGAGTTGTGAAATGTAATGGCATTAACGAGGAAATTTTCAAATGAGCAGAGATCGGACTGGGACTTACCGGATTTGGGATATTTTTCTCGATTCTGGGAATTGTATTCTTCTTTGACAAGGGATTACTTGCCATGGGAAATGTAGGTGTTAAAATTACATATTTCTCAACTCGAGTTGAAAGATTTATGATTCTTGTTTCATTCCTTTGTAAACTCTTACCACCACCCCTCTTTTCTGATTCACTGATCCAGATCCTGTTCTTCTCGGGAGTTACTCTCACCATTGGACTCAAACCAACCGTGCAATTCTTTATGAAACGTCAAAATTATAAGGTCGGTGTTTGAGATATTCTTCCCCTATTACTCGTCCTTTATTGTGCATTTTTTTGACAATGTACTCTTTAATAATTGGGCAGGGAACAATTTCATTTGGTTTAGGGTTCTTCTTTGTTGTCGTAGGATGGCCAATCCTTGGCATGATATTGGAAGCATATGGTTTTGTTGTCCTTTTCAGGTTTGTTGGATAGATGCGGCTACAGTTTAAATTTGTGTGTATATATTGTCTCCGACGGGTGGCGCAGTTGGTTGAAAACTTGGGCTTTGAAGGTGTGCTCCTCTCAAAGTTTTAGGCTCGAGACTCACCTGTGACATTAATTTATGACCTACCGTGTCTCCATTCTGATGTGTATATATTGTTTTAAAAAATTGCGGTTACCCTTGTTTCAAAAAAAATTTGTGTATATATTGTTTTAATCTTTGGTCGTGCTGAATTCTGATGGTTATGGACTATATTCTGTGCAGTGGCTTCTGGCCAACATTGTCAGTCTTTATTCAGAAAGTTCCCGTTCTTGGATGGATATTCCAGCAACCATATGTCAGATCGGTTAGTTTGTACTTTTTTAGTAATTTTCTTTATCAGTTGTTTGGATCAATTTTAATCTAGCTATAATGTTTCCTCTTCATGGAGTTGTTTTTAATATTAATGGTTTCATATGGAGTCGCGTTACTTTCAACGGAGATACATTATAACATATTGTAAGACAAGCATAGTCAGAAACTTGTGTTGATCGTCTTTATTTATTTGTTATTATCTTTTTGTTTGTGGGCGATCTCTTATATTCAGTCATTAATGCACCCTCGATAGTATACAACAAGTGTATCAAATAGGGAAAGTGAAACAAGGGTAACAGGGGGGAGGAATGATTTTTTATTTTTTATTTTTAGAAACATGAAATAAGATTTTCATCAAGGGGAGGAATGATTATTGAAGGGATATCTGGTCTTTTGCAACAAGCATTTTTAGCTAATAGGTTGAGCCTGAGTGAGGGAATAAAAGTGATTTATATGTTACAATGTCTGGTGGGGGTTATTAAGTGTATGGAATCTAGTGTAGGGAGAAAATTGGGATCTCTCAAATACCTCAATTTATTATGAAATGTTATCCGAGTTTATATCACACTGGCGTCACAGAACAGCAGAGTTATAGGAATGGTCCGAATAAAAAGATGGACGACTAGTAGTAGAAGAGAAGACCGTTGGCATCATACCATTGTTCAGGTTGAATAAATCATTGGATAAGGCAATGAAAACGTGGTTGAAGCTACTAAAAAGAACAAAGCTTAGGTTCTAAAAGTATATGTAAGGATGCCACAGTTAACCAGGCCTAATGGTCAAATAAAGGATTTTGTAAAGTTCTTAGAGATTATGGGTTCAATCTATAACCACTAACTTAGAAATCAATTTCCTACGAGTTACATTGACAACCAACTATCGTAGGGTCAAATGTTGTCGTGTAAGAATAGTGAGGATCCAAATGGGGATGTTGATATTTGAATGTGAGAATCAGTTGTACAATATTTCACTGTCAACAGATCACACAAAGGAGAGAAACTAAAGATTGTAGCATCATGTCTTGCGTGCGAGATGCATTTTGGTGTACACAAAGTACAATATACATCAATGTTGGAGAACATGAGACTTACCAACGATGAGGATGGCAGGCTATTATCGAAAATTCGTTGCGAACCATGGCATAATTGTCATTCCCTCAATGCAACTCAAGAAAAGGAGCGTCTAATGGAATGAGGGAAGTTGAGATGCTTCCCAGAAGCTGAAAACAGCCATGAATATGATCGTATTCCTGTCAGCATGGAAGTAGTCTGGATGCAGGATCAAGAGGCCAGCGGCTTTCTTCAATTTATTGGTGTGAATTTTTGTTTTCAAATGGACCCCAAAAGCCCTAAATTTTGTTCAAAGCTTAGGTTGGCGGTGTGATACCTTCTGTGAATAGCTAGGCTGGGTTATGAAATTGATAATATACAGTGTGAAGTGTCGTGAGTGGGTGGCGCAGTGGTCGAAAGCTGGAGCTCTGAAGGTGTGTGCCCCTCAAGGTCTTAAGTTCGAGATTCAACTGTAACATTAATTCATAAACACCTTATTTATCTCCATTCCTTCGATGTCTCCCGGTGCCTGGACTAGGGATGTGCATGGTTATCTCGAGTATAATAGGAGCGAAGCTCCGATTACTGGTTCAAAAAAAAAAATGAAGGTCTAGCCAACTTTCGATTAGTCTCAACTTGACCAATATTTTTTTTTCCAGCGATGTTTGAAATGATACCAAATGCTATATGGTTAATATATTAGTTTGCATCATGCTGTACTAAATATTTACTTTCGTGGACTAGTTAATCTGCAATATTCCAAATCAGTCAAGCATTGTTTGAGTTTTTGTTTGAATTCTTACAGATCCTGAGTTTTTCTCGACCACAGATTTATGTGTTTTTTTGTTGTCGCAGATGTTCGACAAATATCGGGGTAGACGTGTGCCTGTTTGAGCAGAGAATTTATAAGCCGGTTGGAAGGTGAACTTGTAAGTTTCGAACCACTCTTGCTTGGAGGCCCAGTTTTTGTTCGGATGGCGAAAGTAGAAACTACTTTGGCAGTTGATAGTGATAAAAATGAGCTCTATTATCCAACGTAAAAAAAAAAAGAGAAAGAATCAGAAAAACTAAGAAACAGAAACAGACCCTTTTCTTTTCTTAAGGTTTTTTTATATTTCATTTCTGTAAAAAAAAGTGATTGGGACGTGTAGCGGAACATTCTATAGTTTCTATTTTCAAAATTCTTGATGTCATTCTTTGCATTTACAAGGATGAAAAACGATATGGTCGGATTTCTATGGGTTACTACTTTGCATTTTTTCCCCAATTTGTTGTGTGCGTGTGGTGGAAACTGGAAAGATCAATAAGAT

mRNA sequence

CCATTGCTGTGTCTGCACTTCAGGTTTCTATGATCGTTCATCAATTCTTCCATTCTTCTTGTTTTGATTCCATTTTCGTTGCATTAGATCCATAATCGCCCTGCAATTTGCCTCTCTCTTTTGCTCATTTGAACGGCTGGGAGGTGAATTTCTAGTGTCCGCAGATATGGTTTCCTTCGAAATGAATGATCGCAAGAAGATCGGACTGGGACTTACCGGATTTGGGATATTTTTCTCGATTCTGGGAATTGTATTCTTCTTTGACAAGGGATTACTTGCCATGGGAAATATCCTGTTCTTCTCGGGAGTTACTCTCACCATTGGACTCAAACCAACCGTGCAATTCTTTATGAAACGTCAAAATTATAAGGGAACAATTTCATTTGGTTTAGGGTTCTTCTTTGTTGTCGTAGGATGGCCAATCCTTGGCATGATATTGGAAGCATATGGTTTTGTTGTCCTTTTCAGTGGCTTCTGGCCAACATTGTCAGTCTTTATTCAGAAAGTTCCCGTTCTTGGATGGATATTCCAGCAACCATATGTCAGATCGATGTTCGACAAATATCGGGGTAGACGTGTGCCTGTTTGAGCAGAGAATTTATAAGCCGGTTGGAAGGTGAACTTGTAAGTTTCGAACCACTCTTGCTTGGAGGCCCAGTTTTTGTTCGGATGGCGAAAGTAGAAACTACTTTGGCAGTTGATAGTGATAAAAATGAGCTCTATTATCCAACGTAAAAAAAAAAAGAGAAAGAATCAGAAAAACTAAGAAACAGAAACAGACCCTTTTCTTTTCTTAAGGTTTTTTTATATTTCATTTCTGTAAAAAAAAGTGATTGGGACGTGTAGCGGAACATTCTATAGTTTCTATTTTCAAAATTCTTGATGTCATTCTTTGCATTTACAAGGATGAAAAACGATATGGTCGGATTTCTATGGGTTACTACTTTGCATTTTTTCCCCAATTTGTTGTGTGCGTGTGGTGGAAACTGGAAAGATCAATAAGAT

Coding sequence (CDS)

ATGGTTTCCTTCGAAATGAATGATCGCAAGAAGATCGGACTGGGACTTACCGGATTTGGGATATTTTTCTCGATTCTGGGAATTGTATTCTTCTTTGACAAGGGATTACTTGCCATGGGAAATATCCTGTTCTTCTCGGGAGTTACTCTCACCATTGGACTCAAACCAACCGTGCAATTCTTTATGAAACGTCAAAATTATAAGGGAACAATTTCATTTGGTTTAGGGTTCTTCTTTGTTGTCGTAGGATGGCCAATCCTTGGCATGATATTGGAAGCATATGGTTTTGTTGTCCTTTTCAGTGGCTTCTGGCCAACATTGTCAGTCTTTATTCAGAAAGTTCCCGTTCTTGGATGGATATTCCAGCAACCATATGTCAGATCGATGTTCGACAAATATCGGGGTAGACGTGTGCCTGTTTGA

Protein sequence

MVSFEMNDRKKIGLGLTGFGIFFSILGIVFFFDKGLLAMGNILFFSGVTLTIGLKPTVQFFMKRQNYKGTISFGLGFFFVVVGWPILGMILEAYGFVVLFSGFWPTLSVFIQKVPVLGWIFQQPYVRSMFDKYRGRRVPV

Homology

[Close]

BLAST of Sed0002718 vs. NCBI nr
Match: XP_022932598.1 (vesicle transport protein GOT1-like [Cucurbita moschata] >XP_022932599.1 vesicle transport protein GOT1-like [Cucurbita moschata] >XP_022972315.1 vesicle transport protein GOT1-like [Cucurbita maxima] >XP_022972317.1 vesicle transport protein GOT1-like [Cucurbita maxima] >XP_023539038.1 vesicle transport protein GOT1-like [Cucurbita pepo subsp. pepo] >XP_023539039.1 vesicle transport protein GOT1-like [Cucurbita pepo subsp. pepo] >KAG6597641.1 Vesicle transport protein GOT1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 268.1 bits (684), Expect = 4.3e-68
Identity = 128/140 (91.43%), Postives = 137/140 (97.86%), Query Frame = 0


Query: 1   MVSFEMNDRKKIGLGLTGFGIFFSILGIVFFFDKGLLAMGNILFFSGVTLTIGLKPTVQF 60
           MVSFEMNDRKKIGLGLTGFGIFFS LGIVFFFDKGLLAMGNILFFSGVTLTIGLK T+QF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60

Query: 61  FMKRQNYKGTISFGLGFFFVVVGWPILGMILEAYGFVVLFSGFWPTLSVFIQKVPVLGWI 120
           FMKRQN+KGTISFGLGFFFV++GWPI+GMILEAYGFVVLFSGFWPTL+VF+QK+PVLGW+
Sbjct: 61  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 121 FQQPYVRSMFDKYRGRRVPV 141
           FQQPYVRS FDKYRGRRVPV
Sbjct: 121 FQQPYVRSFFDKYRGRRVPV 140

[Close]

BLAST of Sed0002718 vs. NCBI nr
Match: XP_038879388.1 (vesicle transport protein GOT1-like [Benincasa hispida] >XP_038879468.1 vesicle transport protein GOT1-like [Benincasa hispida] >XP_038879546.1 vesicle transport protein GOT1-like [Benincasa hispida])

HSP 1 Score: 267.3 bits (682), Expect = 7.4e-68
Identity = 128/140 (91.43%), Postives = 136/140 (97.14%), Query Frame = 0


Query: 1   MVSFEMNDRKKIGLGLTGFGIFFSILGIVFFFDKGLLAMGNILFFSGVTLTIGLKPTVQF 60
           MVSFEMNDRKKIGLGLTGFGIFFS LGIVFFFDKGLLAMGNILFFSGVTLTIGLK T+QF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60

Query: 61  FMKRQNYKGTISFGLGFFFVVVGWPILGMILEAYGFVVLFSGFWPTLSVFIQKVPVLGWI 120
           FMKRQN+KGTISFGLGFFFV++GWPI GMILEAYGFVVLFSGFWPTL+VF+QK+PVLGW+
Sbjct: 61  FMKRQNFKGTISFGLGFFFVIIGWPIFGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 121 FQQPYVRSMFDKYRGRRVPV 141
           FQQPYVRS FDKYRGRRVPV
Sbjct: 121 FQQPYVRSFFDKYRGRRVPV 140

[Close]

BLAST of Sed0002718 vs. NCBI nr
Match: XP_004152095.1 (vesicle transport protein GOT1 [Cucumis sativus] >XP_031740250.1 vesicle transport protein GOT1 [Cucumis sativus] >KGN53100.1 hypothetical protein Csa_014796 [Cucumis sativus])

HSP 1 Score: 266.9 bits (681), Expect = 9.6e-68
Identity = 127/140 (90.71%), Postives = 136/140 (97.14%), Query Frame = 0


Query: 1   MVSFEMNDRKKIGLGLTGFGIFFSILGIVFFFDKGLLAMGNILFFSGVTLTIGLKPTVQF 60
           MVSFEMNDRKKIGLGLTGFG+FFS LGIVFFFDKGLLAMGNILFFSGVTLTIGLK T+QF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGVFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60

Query: 61  FMKRQNYKGTISFGLGFFFVVVGWPILGMILEAYGFVVLFSGFWPTLSVFIQKVPVLGWI 120
           FMKRQN+KGTISFGLGFFFV++GWPI GMILEAYGFVVLFSGFWPTL+VF+QK+PVLGW+
Sbjct: 61  FMKRQNFKGTISFGLGFFFVIIGWPIFGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 121 FQQPYVRSMFDKYRGRRVPV 141
           FQQPYVRS FDKYRGRRVPV
Sbjct: 121 FQQPYVRSFFDKYRGRRVPV 140

[Close]

BLAST of Sed0002718 vs. NCBI nr
Match: XP_008453962.1 (PREDICTED: vesicle transport protein GOT1B-like [Cucumis melo] >XP_008453963.1 PREDICTED: vesicle transport protein GOT1B-like [Cucumis melo] >XP_016901587.1 PREDICTED: vesicle transport protein GOT1B-like [Cucumis melo])

HSP 1 Score: 266.5 bits (680), Expect = 1.3e-67
Identity = 126/140 (90.00%), Postives = 136/140 (97.14%), Query Frame = 0


Query: 1   MVSFEMNDRKKIGLGLTGFGIFFSILGIVFFFDKGLLAMGNILFFSGVTLTIGLKPTVQF 60
           MVSFEMNDRKKIGLGLTGFG+FFS LGIVFFFDKGLLAMGNILFFSGVTLTIGLK T+QF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGVFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60

Query: 61  FMKRQNYKGTISFGLGFFFVVVGWPILGMILEAYGFVVLFSGFWPTLSVFIQKVPVLGWI 120
           FMKRQN+KGT+SFGLGFFFV++GWPI GMILEAYGFVVLFSGFWPTL+VF+QK+PVLGW+
Sbjct: 61  FMKRQNFKGTVSFGLGFFFVIIGWPIFGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 121 FQQPYVRSMFDKYRGRRVPV 141
           FQQPYVRS FDKYRGRRVPV
Sbjct: 121 FQQPYVRSFFDKYRGRRVPV 140

[Close]

BLAST of Sed0002718 vs. NCBI nr
Match: PQM33111.1 (vesicle transport protein GOT1 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 263.5 bits (672), Expect = 1.1e-66
Identity = 123/140 (87.86%), Postives = 135/140 (96.43%), Query Frame = 0


Query: 1   MVSFEMNDRKKIGLGLTGFGIFFSILGIVFFFDKGLLAMGNILFFSGVTLTIGLKPTVQF 60
           MVSFEMNDRKKIGLGLTGFGIFFS LGIVFFFDKGLLAMGNILFFSGVTLTIG KPT+QF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGIFFSCLGIVFFFDKGLLAMGNILFFSGVTLTIGFKPTMQF 60

Query: 61  FMKRQNYKGTISFGLGFFFVVVGWPILGMILEAYGFVVLFSGFWPTLSVFIQKVPVLGWI 120
           FMKRQNYKGTISFGLGFF V++GWPI+GM+LE YGF+VLFSGFWPTL+VF+QK+PVLGW+
Sbjct: 61  FMKRQNYKGTISFGLGFFCVIIGWPIVGMVLEGYGFIVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 121 FQQPYVRSMFDKYRGRRVPV 141
           FQQPY+RS FD+YRGRRVPV
Sbjct: 121 FQQPYIRSFFDRYRGRRVPV 140

[Close]

BLAST of Sed0002718 vs. ExPASy Swiss-Prot
Match: Q6NMM1 (Vesicle transport protein GOT1 OS=Arabidopsis thaliana OX=3702 GN=GOT1 PE=1 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.0e-59
Identity = 103/140 (73.57%), Postives = 125/140 (89.29%), Query Frame = 0


Query: 1   MVSFEMNDRKKIGLGLTGFGIFFSILGIVFFFDKGLLAMGNILFFSGVTLTIGLKPTVQF 60
           M S EMND KKIGLGLTGFG+FF+ LG++F FDKGL+AMGNILF +GVTLTIG+ P +QF
Sbjct: 1   MASLEMNDLKKIGLGLTGFGVFFTFLGVIFVFDKGLIAMGNILFLAGVTLTIGINPAIQF 60

Query: 61  FMKRQNYKGTISFGLGFFFVVVGWPILGMILEAYGFVVLFSGFWPTLSVFIQKVPVLGWI 120
           F KRQN+KGTISFGLGF  VV GWPI G++LE+YGF+VLFSGFWPTL+VF+Q++P+LGW+
Sbjct: 61  FTKRQNFKGTISFGLGFLLVVFGWPIFGLLLESYGFLVLFSGFWPTLAVFLQRIPLLGWL 120

Query: 121 FQQPYVRSMFDKYRGRRVPV 141
            QQPY+RS+ D+YRGRRVPV
Sbjct: 121 LQQPYIRSLLDRYRGRRVPV 140

[Close]

BLAST of Sed0002718 vs. ExPASy Swiss-Prot
Match: Q9CR60 (Vesicle transport protein GOT1B OS=Mus musculus OX=10090 GN=Golt1b PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 4.4e-31
Identity = 65/127 (51.18%), Postives = 89/127 (70.08%), Query Frame = 0


Query: 6   MNDRKKIGLGLTGFGIFFSILGIVFFFDKGLLAMGNILFFSGVTLTIGLKPTVQFFMKRQ 65
           + D +KIG+GLTGFG+FF   G++ FFDK LLA+GN+LF +G+   IGL+ T +FF +R 
Sbjct: 4   LTDTQKIGMGLTGFGVFFLFFGMILFFDKALLAIGNVLFVAGLAFVIGLERTFRFFFQRH 63

Query: 66  NYKGTISFGLGFFFVVVGWPILGMILEAYGFVVLFSGFWPTLSVFIQKVPVLGWIFQQPY 125
             K T  F  G F V++GWP++GMI E YGF +LF GF+P +  FI++VPVLG +   P 
Sbjct: 64  KVKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLPG 123

Query: 126 VRSMFDK 133
           +RS  DK
Sbjct: 124 IRSFVDK 130

[Close]

BLAST of Sed0002718 vs. ExPASy Swiss-Prot
Match: Q2YDE3 (Vesicle transport protein GOT1B OS=Bos taurus OX=9913 GN=GOLT1B PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 9.8e-31
Identity = 64/127 (50.39%), Postives = 89/127 (70.08%), Query Frame = 0


Query: 6   MNDRKKIGLGLTGFGIFFSILGIVFFFDKGLLAMGNILFFSGVTLTIGLKPTVQFFMKRQ 65
           + D +KIG+GLTGFG+FF   G++ FFDK LLA+GN+LF +G+   IGL+ T +FF ++ 
Sbjct: 4   LTDTQKIGMGLTGFGVFFLFFGMILFFDKALLAIGNVLFVAGLAFVIGLERTFRFFFQKH 63

Query: 66  NYKGTISFGLGFFFVVVGWPILGMILEAYGFVVLFSGFWPTLSVFIQKVPVLGWIFQQPY 125
             K T  F  G F V++GWP++GMI E YGF +LF GF+P +  FI++VPVLG +   P 
Sbjct: 64  KMKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLPG 123

Query: 126 VRSMFDK 133
           +RS  DK
Sbjct: 124 IRSFVDK 130

[Close]

BLAST of Sed0002718 vs. ExPASy Swiss-Prot
Match: Q9Y3E0 (Vesicle transport protein GOT1B OS=Homo sapiens OX=9606 GN=GOLT1B PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 9.8e-31
Identity = 64/127 (50.39%), Postives = 89/127 (70.08%), Query Frame = 0


Query: 6   MNDRKKIGLGLTGFGIFFSILGIVFFFDKGLLAMGNILFFSGVTLTIGLKPTVQFFMKRQ 65
           + D +KIG+GLTGFG+FF   G++ FFDK LLA+GN+LF +G+   IGL+ T +FF ++ 
Sbjct: 4   LTDTQKIGMGLTGFGVFFLFFGMILFFDKALLAIGNVLFVAGLAFVIGLERTFRFFFQKH 63

Query: 66  NYKGTISFGLGFFFVVVGWPILGMILEAYGFVVLFSGFWPTLSVFIQKVPVLGWIFQQPY 125
             K T  F  G F V++GWP++GMI E YGF +LF GF+P +  FI++VPVLG +   P 
Sbjct: 64  KMKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLPG 123

Query: 126 VRSMFDK 133
           +RS  DK
Sbjct: 124 IRSFVDK 130

[Close]

BLAST of Sed0002718 vs. ExPASy Swiss-Prot
Match: Q9DCQ3 (Vesicle transport protein GOT1A OS=Mus musculus OX=10090 GN=Golt1a PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.1e-25
Identity = 60/126 (47.62%), Postives = 85/126 (67.46%), Query Frame = 0


Query: 10  KKIGLGLTGFGIFFSILGIVFFFDKGLLAMGNILFFSGVTLTIGLKPTVQFFMKRQNYKG 69
           +KIG+G+TGFG+FF + GI+ +FD  LLA GN+LF +G++L IGL+ T  FF +R   KG
Sbjct: 8   QKIGVGITGFGVFFILFGILLYFDSVLLAFGNLLFLTGLSLIIGLRRTFAFFFQRHKLKG 67

Query: 70  TISFGLGFFFVVVGWPILGMILEAYGFVVLFSGFWPTLSVFIQKVPVLGWIFQQPYVRSM 129
           T  F  G   V++ WP+LGM+LEAYGF+ LF GF+P +  F      LG  F  P++ ++
Sbjct: 68  TSFFLGGVAIVLLRWPLLGMLLEAYGFISLFKGFFPVVFGF------LGSAFNIPFLSTL 127

Query: 130 FDKYRG 136
           F K +G
Sbjct: 128 FQKLQG 127

[Close]

BLAST of Sed0002718 vs. ExPASy TrEMBL
Match: A0A6J1I889 (vesicle transport protein GOT1-like OS=Cucurbita maxima OX=3661 GN=LOC111470890 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.1e-68
Identity = 128/140 (91.43%), Postives = 137/140 (97.86%), Query Frame = 0


Query: 1   MVSFEMNDRKKIGLGLTGFGIFFSILGIVFFFDKGLLAMGNILFFSGVTLTIGLKPTVQF 60
           MVSFEMNDRKKIGLGLTGFGIFFS LGIVFFFDKGLLAMGNILFFSGVTLTIGLK T+QF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60

Query: 61  FMKRQNYKGTISFGLGFFFVVVGWPILGMILEAYGFVVLFSGFWPTLSVFIQKVPVLGWI 120
           FMKRQN+KGTISFGLGFFFV++GWPI+GMILEAYGFVVLFSGFWPTL+VF+QK+PVLGW+
Sbjct: 61  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 121 FQQPYVRSMFDKYRGRRVPV 141
           FQQPYVRS FDKYRGRRVPV
Sbjct: 121 FQQPYVRSFFDKYRGRRVPV 140

[Close]

BLAST of Sed0002718 vs. ExPASy TrEMBL
Match: A0A6J1F266 (vesicle transport protein GOT1-like OS=Cucurbita moschata OX=3662 GN=LOC111439110 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.1e-68
Identity = 128/140 (91.43%), Postives = 137/140 (97.86%), Query Frame = 0


Query: 1   MVSFEMNDRKKIGLGLTGFGIFFSILGIVFFFDKGLLAMGNILFFSGVTLTIGLKPTVQF 60
           MVSFEMNDRKKIGLGLTGFGIFFS LGIVFFFDKGLLAMGNILFFSGVTLTIGLK T+QF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60

Query: 61  FMKRQNYKGTISFGLGFFFVVVGWPILGMILEAYGFVVLFSGFWPTLSVFIQKVPVLGWI 120
           FMKRQN+KGTISFGLGFFFV++GWPI+GMILEAYGFVVLFSGFWPTL+VF+QK+PVLGW+
Sbjct: 61  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 121 FQQPYVRSMFDKYRGRRVPV 141
           FQQPYVRS FDKYRGRRVPV
Sbjct: 121 FQQPYVRSFFDKYRGRRVPV 140

[Close]

BLAST of Sed0002718 vs. ExPASy TrEMBL
Match: A0A0A0KU00 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G016390 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 4.7e-68
Identity = 127/140 (90.71%), Postives = 136/140 (97.14%), Query Frame = 0


Query: 1   MVSFEMNDRKKIGLGLTGFGIFFSILGIVFFFDKGLLAMGNILFFSGVTLTIGLKPTVQF 60
           MVSFEMNDRKKIGLGLTGFG+FFS LGIVFFFDKGLLAMGNILFFSGVTLTIGLK T+QF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGVFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60

Query: 61  FMKRQNYKGTISFGLGFFFVVVGWPILGMILEAYGFVVLFSGFWPTLSVFIQKVPVLGWI 120
           FMKRQN+KGTISFGLGFFFV++GWPI GMILEAYGFVVLFSGFWPTL+VF+QK+PVLGW+
Sbjct: 61  FMKRQNFKGTISFGLGFFFVIIGWPIFGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 121 FQQPYVRSMFDKYRGRRVPV 141
           FQQPYVRS FDKYRGRRVPV
Sbjct: 121 FQQPYVRSFFDKYRGRRVPV 140

[Close]

BLAST of Sed0002718 vs. ExPASy TrEMBL
Match: A0A1S3BYQ5 (vesicle transport protein GOT1B-like OS=Cucumis melo OX=3656 GN=LOC103494525 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 6.1e-68
Identity = 126/140 (90.00%), Postives = 136/140 (97.14%), Query Frame = 0


Query: 1   MVSFEMNDRKKIGLGLTGFGIFFSILGIVFFFDKGLLAMGNILFFSGVTLTIGLKPTVQF 60
           MVSFEMNDRKKIGLGLTGFG+FFS LGIVFFFDKGLLAMGNILFFSGVTLTIGLK T+QF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGVFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60

Query: 61  FMKRQNYKGTISFGLGFFFVVVGWPILGMILEAYGFVVLFSGFWPTLSVFIQKVPVLGWI 120
           FMKRQN+KGT+SFGLGFFFV++GWPI GMILEAYGFVVLFSGFWPTL+VF+QK+PVLGW+
Sbjct: 61  FMKRQNFKGTVSFGLGFFFVIIGWPIFGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 121 FQQPYVRSMFDKYRGRRVPV 141
           FQQPYVRS FDKYRGRRVPV
Sbjct: 121 FQQPYVRSFFDKYRGRRVPV 140

[Close]

BLAST of Sed0002718 vs. ExPASy TrEMBL
Match: A0A314U7B4 (Vesicle transport protein GOT1 OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_02895 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.2e-67
Identity = 123/140 (87.86%), Postives = 135/140 (96.43%), Query Frame = 0


Query: 1   MVSFEMNDRKKIGLGLTGFGIFFSILGIVFFFDKGLLAMGNILFFSGVTLTIGLKPTVQF 60
           MVSFEMNDRKKIGLGLTGFGIFFS LGIVFFFDKGLLAMGNILFFSGVTLTIG KPT+QF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGIFFSCLGIVFFFDKGLLAMGNILFFSGVTLTIGFKPTMQF 60

Query: 61  FMKRQNYKGTISFGLGFFFVVVGWPILGMILEAYGFVVLFSGFWPTLSVFIQKVPVLGWI 120
           FMKRQNYKGTISFGLGFF V++GWPI+GM+LE YGF+VLFSGFWPTL+VF+QK+PVLGW+
Sbjct: 61  FMKRQNYKGTISFGLGFFCVIIGWPIVGMVLEGYGFIVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 121 FQQPYVRSMFDKYRGRRVPV 141
           FQQPY+RS FD+YRGRRVPV
Sbjct: 121 FQQPYIRSFFDRYRGRRVPV 140

[Close]

BLAST of Sed0002718 vs. TAIR 10
Match: AT3G49420.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 250.8 bits (639), Expect = 6.7e-67
Identity = 118/140 (84.29%), Postives = 130/140 (92.86%), Query Frame = 0


Query: 1   MVSFEMNDRKKIGLGLTGFGIFFSILGIVFFFDKGLLAMGNILFFSGVTLTIGLKPTVQF 60
           M+SFEMNDRKKIGLGLTGFG+FFS LGIVF FDKGLLAMGNILF SGV+LTIG K T+QF
Sbjct: 1   MMSFEMNDRKKIGLGLTGFGVFFSFLGIVFVFDKGLLAMGNILFISGVSLTIGFKSTMQF 60

Query: 61  FMKRQNYKGTISFGLGFFFVVVGWPILGMILEAYGFVVLFSGFWPTLSVFIQKVPVLGWI 120
           FMKRQNYKGTISFG+GFFFV++GWPILGM+LE YGF VLFSGFWPTL+VF QK+PVLGWI
Sbjct: 61  FMKRQNYKGTISFGVGFFFVIIGWPILGMMLETYGFFVLFSGFWPTLAVFAQKIPVLGWI 120

Query: 121 FQQPYVRSMFDKYRGRRVPV 141
            QQPY+RS FDKYRG+RVPV
Sbjct: 121 IQQPYIRSFFDKYRGKRVPV 140

[Close]

BLAST of Sed0002718 vs. TAIR 10
Match: AT5G01430.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 250.8 bits (639), Expect = 6.7e-67
Identity = 118/140 (84.29%), Postives = 130/140 (92.86%), Query Frame = 0


Query: 1   MVSFEMNDRKKIGLGLTGFGIFFSILGIVFFFDKGLLAMGNILFFSGVTLTIGLKPTVQF 60
           M+SFEMNDRKKIGLGLTGFG+FFS LGIVF FDKGLLAMGNILF SGV+LTIG K T+QF
Sbjct: 1   MMSFEMNDRKKIGLGLTGFGVFFSFLGIVFVFDKGLLAMGNILFISGVSLTIGFKSTMQF 60

Query: 61  FMKRQNYKGTISFGLGFFFVVVGWPILGMILEAYGFVVLFSGFWPTLSVFIQKVPVLGWI 120
           FMKRQNYKGTISFG+GFFFV++GWPILGM+LE YGF VLFSGFWPTL+VF QK+PVLGWI
Sbjct: 61  FMKRQNYKGTISFGVGFFFVIIGWPILGMMLETYGFFVLFSGFWPTLAVFAQKIPVLGWI 120

Query: 121 FQQPYVRSMFDKYRGRRVPV 141
            QQPY+RS FDKYRG+RVPV
Sbjct: 121 IQQPYIRSFFDKYRGKRVPV 140

[Close]

BLAST of Sed0002718 vs. TAIR 10
Match: AT5G01430.2 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 250.8 bits (639), Expect = 6.7e-67
Identity = 118/140 (84.29%), Postives = 130/140 (92.86%), Query Frame = 0


Query: 1   MVSFEMNDRKKIGLGLTGFGIFFSILGIVFFFDKGLLAMGNILFFSGVTLTIGLKPTVQF 60
           M+SFEMNDRKKIGLGLTGFG+FFS LGIVF FDKGLLAMGNILF SGV+LTIG K T+QF
Sbjct: 1   MMSFEMNDRKKIGLGLTGFGVFFSFLGIVFVFDKGLLAMGNILFISGVSLTIGFKSTMQF 60

Query: 61  FMKRQNYKGTISFGLGFFFVVVGWPILGMILEAYGFVVLFSGFWPTLSVFIQKVPVLGWI 120
           FMKRQNYKGTISFG+GFFFV++GWPILGM+LE YGF VLFSGFWPTL+VF QK+PVLGWI
Sbjct: 61  FMKRQNYKGTISFGVGFFFVIIGWPILGMMLETYGFFVLFSGFWPTLAVFAQKIPVLGWI 120

Query: 121 FQQPYVRSMFDKYRGRRVPV 141
            QQPY+RS FDKYRG+RVPV
Sbjct: 121 IQQPYIRSFFDKYRGKRVPV 140

[Close]

BLAST of Sed0002718 vs. TAIR 10
Match: AT3G03180.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 230.7 bits (587), Expect = 7.1e-61
Identity = 103/140 (73.57%), Postives = 125/140 (89.29%), Query Frame = 0


Query: 1   MVSFEMNDRKKIGLGLTGFGIFFSILGIVFFFDKGLLAMGNILFFSGVTLTIGLKPTVQF 60
           M S EMND KKIGLGLTGFG+FF+ LG++F FDKGL+AMGNILF +GVTLTIG+ P +QF
Sbjct: 1   MASLEMNDLKKIGLGLTGFGVFFTFLGVIFVFDKGLIAMGNILFLAGVTLTIGINPAIQF 60

Query: 61  FMKRQNYKGTISFGLGFFFVVVGWPILGMILEAYGFVVLFSGFWPTLSVFIQKVPVLGWI 120
           F KRQN+KGTISFGLGF  VV GWPI G++LE+YGF+VLFSGFWPTL+VF+Q++P+LGW+
Sbjct: 61  FTKRQNFKGTISFGLGFLLVVFGWPIFGLLLESYGFLVLFSGFWPTLAVFLQRIPLLGWL 120

Query: 121 FQQPYVRSMFDKYRGRRVPV 141
            QQPY+RS+ D+YRGRRVPV
Sbjct: 121 LQQPYIRSLLDRYRGRRVPV 140

[Close]

BLAST of Sed0002718 vs. TAIR 10
Match: AT1G05785.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 133.3 bits (334), Expect = 1.5e-31
Identity = 59/121 (48.76%), Postives = 86/121 (71.07%), Query Frame = 0


Query: 4   FEMNDRKKIGLGLTGFGIFFSILGIVFFFDKGLLAMGNILFFSGVTLTIGLKPTVQFFMK 63
           +E+ ++KK+GLGL GFG+ F+ LG++ +FD+GLLA+GN+ +  GV L +G + T + F  
Sbjct: 3   YEITEQKKVGLGLIGFGLSFTFLGVILYFDRGLLALGNLFWLIGVGLLLGWQSTWRVFTN 62

Query: 64  RQNYKGTISFGLGFFFVVVGWPILGMILEAYGFVVLFSGFWPTLSVFIQKVPVLGWIFQQ 123
             N +GTI F LG F + V WPI+G+ILE YG +VLF GFW T+  F+ ++P +GWI Q 
Sbjct: 63  VNNLRGTICFVLGLFLIFVRWPIIGIILEIYGVIVLFGGFWSTVKAFLSQIPFVGWIIQY 122

Query: 124 P 125
           P
Sbjct: 123 P 123

The following BLAST results are available for this feature:

BLAST of Sed0002718 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932598.1	4.3e-68	91.43	vesicle transport protein GOT1-like [Cucurbita moschata] >XP_022932599.1 vesicle...	[more]
XP_038879388.1	7.4e-68	91.43	vesicle transport protein GOT1-like [Benincasa hispida] >XP_038879468.1 vesicle ...	[more]
XP_004152095.1	9.6e-68	90.71	vesicle transport protein GOT1 [Cucumis sativus] >XP_031740250.1 vesicle transpo...	[more]
XP_008453962.1	1.3e-67	90.00	PREDICTED: vesicle transport protein GOT1B-like [Cucumis melo] >XP_008453963.1 P...	[more]
PQM33111.1	1.1e-66	87.86	vesicle transport protein GOT1 [Prunus yedoensis var. nudiflora]	[more]

BLAST of Sed0002718 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NMM1	1.0e-59	73.57	Vesicle transport protein GOT1 OS=Arabidopsis thaliana OX=3702 GN=GOT1 PE=1 SV=1	[more]
Q9CR60	4.4e-31	51.18	Vesicle transport protein GOT1B OS=Mus musculus OX=10090 GN=Golt1b PE=1 SV=1	[more]
Q2YDE3	9.8e-31	50.39	Vesicle transport protein GOT1B OS=Bos taurus OX=9913 GN=GOLT1B PE=2 SV=1	[more]
Q9Y3E0	9.8e-31	50.39	Vesicle transport protein GOT1B OS=Homo sapiens OX=9606 GN=GOLT1B PE=1 SV=1	[more]
Q9DCQ3	2.1e-25	47.62	Vesicle transport protein GOT1A OS=Mus musculus OX=10090 GN=Golt1a PE=2 SV=1	[more]

BLAST of Sed0002718 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I889	2.1e-68	91.43	vesicle transport protein GOT1-like OS=Cucurbita maxima OX=3661 GN=LOC111470890 ...	[more]
A0A6J1F266	2.1e-68	91.43	vesicle transport protein GOT1-like OS=Cucurbita moschata OX=3662 GN=LOC11143911...	[more]
A0A0A0KU00	4.7e-68	90.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G016390 PE=4 SV=1	[more]
A0A1S3BYQ5	6.1e-68	90.00	vesicle transport protein GOT1B-like OS=Cucumis melo OX=3656 GN=LOC103494525 PE=...	[more]
A0A314U7B4	5.2e-67	87.86	Vesicle transport protein GOT1 OS=Prunus yedoensis var. nudiflora OX=2094558 GN=...	[more]

BLAST of Sed0002718 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49420.1	6.7e-67	84.29	Got1/Sft2-like vescicle transport protein family	[more]
AT5G01430.1	6.7e-67	84.29	Got1/Sft2-like vescicle transport protein family	[more]
AT5G01430.2	6.7e-67	84.29	Got1/Sft2-like vescicle transport protein family	[more]
AT3G03180.1	7.1e-61	73.57	Got1/Sft2-like vescicle transport protein family	[more]
AT1G05785.1	1.5e-31	48.76	Got1/Sft2-like vescicle transport protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007305	Vesicle transport protein, Got1/SFT2-like	PFAM	PF04178	Got1	coord: 21..115 e-value: 3.9E-14 score: 53.0
None	No IPR available	PANTHER	PTHR21493	CGI-141-RELATED/LIPASE CONTAINING PROTEIN	coord: 1..140
None	No IPR available	PANTHER	PTHR21493:SF248	SUBFAMILY NOT NAMED	coord: 1..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002718.1	Sed0002718.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0016021	integral component of membrane