Sed0002633 (gene) Chayote v1

Overview


Name	Sed0002633
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Copper transport protein like
Location	LG07: 37742021 .. 37744401 (+)
RNA-Seq Expression	Sed0002633
Synteny	Sed0002633

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAAAGCCTGTGAAAACCCATAAACGCAGAGATCTGCGAGGGCGAAATTTCCAAGACTTTTTTTTCGTCGATTTATCCTCTCGAATTTCTGCAATCTGTAACCATGTCTCAGGTAAACGCTACGAATTTCTTGTTGATTTTATCTCGTTTGCAATCGTTCAAGATTAGTCTTCGATTTTTCATCCTAATCTTTCGTTTCACGATTTGGAGATCGAAGTTGCGTTAGTTCGTTCTTTTTGGACCTTGAATCTGATGCTAGGAGCATTAATCTTTGATTTTATGAGATTTTGTTTTGGAATTTATCCGATTTATTGCTTATTGGATGTGTTATGCGTTGAGAAATGTTGTGAAAGCTTCTAAAGATGAAGTAGCTACTCGCCTGAGTGTTGATGTATTGCATAATTTCTACTTATTTTGCGATTCGGACTTTCATATCTTCGATTCTTGTTGCATTTTGTTTTTGTTCTTGTTCTTGTTCATTTCTTGATTTTATAGATTTGCTTTTCATTTGATGTGAATCTGACGCTAGTGACGGAAATGATATTAACAGTATAGAGACAATGAAGTCAAAATCTGAGAGAGCTCTGTATAAATATTTCTTGAACAACGCATATTGATCAATTAGTTGGTTGATAATTGGTTAATTGATCGCAAATGAAGCTTTATCTTGATCATATATTGAGATTATGGTCATTGACCGACTTTTCCCCCAATTTTCCATGTTCTGCTCCTTTATATGTTTTTTTTAATTTATTTTTCTATGTTAATTTTGTGAGCCGATTGTGTTAAAAATCAATTAGAATAATTATGGATGTCACTGATGGTATTGGTAGACAAGTCCCATTTGATAGAATTGGATGAGTCAATTTCTGAAAGATTTTGTTAAAGGACCGTTGATATTAAACACTTGTAAGTTAAATGCTCGTGTGAGCTGAGTTAACTATTATTTATTGGTAATACGGTATCCTTATTTTTTATATGGGTGAGTTTTGTGTGAGTTTATGCGCATCTTGACTATTCTCTATTATTTCTTCATGTAAGGCAATCTGTATTCCATCATCCCTAGTAGAGTTCTTTGATTTCATCTCAATAAGTATGACTTGAAATTGTTTTTGTGCAGACTACTGTCCTCAAGGTTGCTATGTCATGTCAAGGCTGTGTTGGAGCCGTCAAAAGGGTCTTGGGTAAACTGGAAGGTTTGTTATTCCTTTGCTAAATTTTGGTTGTCTCGTGATGTGTTCTTATTTGATTTGTAAACTTTGTATTGGACCACTAAATGTGACCGAGCCAGCTTACAAACAACTCAACTATAGTATTCAATTGTCAAAAAATTTCATAAGAAATTGTTTTTTAGGTAGGTGACCACCCTGGATTGAACCCATAACCATAAGTATTTGGGGTTCGAAGATCTTCTTTACCACTAAACCAACTCATGATTGTTGACTCCTTACATTTTTACATGCCGTGGAACAATAAAGGGTTTTGGACTAATATGAAAGTATAAACCATTTTGTCCCCGAAGAATGGCGCAGTGGTTGAAGACTTGGGCTTTGAGGGTATGCTTCCCTCAAGGTCCTAGGTTCGAGACTAACTTGTGACATTACTCCTTCGATGTCTCCGGTGCCTGATCTAGAGATAGGTGTGGTTACCCTTGTTTAAAAAGAAGTAGAAAAAAGTATAAACCATTTTTTTCGTATCGGAAGATGCACACTTGGTTACCTGTGCGCTGCGCTGAATTAAAATGAATTCTCGAGTGATTGTTTAGTTAATGGTAAGTCCTTCAATATTATCCTTTAGTTAAGTCTCTTAGATTTTTTCTATTACCAATAAGATTATGAACATTTTGAAAACTACTCAAACTGCTTGGCTACCATGTCCAGGAGTCGAAACATTTGACATCGACATAGATGCACAAAAGGTGACCGTGAAAGGCAATGTGCAGCGCGAAGTAGTTTTCCAAACTGTTTCGAAAACCGGGAAGAAGACTGCATACTGGGAGGACGAAGCCCCGGCAGCACCTGCACCAGAGGCAGCCCCAGCAGCCGCTAGCAGCTGAAGCAGAAGCTAAACCTGCGGCTGCTAAAAGTTATTCCTATTTATAATGGAAATTTTCTGTTCAATGCATAAGGTATTTGCTTCGTGAAGCTAATAATAATGTAATAGTACGTGAAACTTGGCTATTTAGTCTGTAATATTTTGATGTAAGTGCTTCTTGTATGACCTACATTAAAACTTAACTATACTTTTTGTTTTTGTCTCATTTTTTTTTTCTTTCTGCTATTTAGTCTGTAATATGTTGTTTGAAATTGTTCAATTCCTTGAAGGGCCTTCAATGGCTGTATGGCTTAAATTTGAAATTGTTGGTTAAGTCTGATATTTG

mRNA sequence

GGAAAAGCCTGTGAAAACCCATAAACGCAGAGATCTGCGAGGGCGAAATTTCCAAGACTTTTTTTTCGTCGATTTATCCTCTCGAATTTCTGCAATCTGTAACCATGTCTCAGACTACTGTCCTCAAGGTTGCTATGTCATGTCAAGGCTGTGTTGGAGCCGTCAAAAGGGTCTTGGGTAAACTGGAAGGAGTCGAAACATTTGACATCGACATAGATGCACAAAAGGTGACCGTGAAAGGCAATGTGCAGCGCGAAGTAGTTTTCCAAACTGTTTCGAAAACCGGGAAGAAGACTGCATACTGGGAGGACGAAGCCCCGGCAGCACCTGCACCAGAGGCAGCCCCAGCAGCCGCTAGCAGCTGAAGCAGAAGCTAAACCTGCGGCTGCTAAAAGTTATTCCTATTTATAATGGAAATTTTCTGTTCAATGCATAAGGTATTTGCTTCGTGAAGCTAATAATAATGTAATAGTACGTGAAACTTGGCTATTTAGTCTGTAATATTTTGATGTAAGTGCTTCTTGTATGACCTACATTAAAACTTAACTATACTTTTTGTTTTTGTCTCATTTTTTTTTTCTTTCTGCTATTTAGTCTGTAATATGTTGTTTGAAATTGTTCAATTCCTTGAAGGGCCTTCAATGGCTGTATGGCTTAAATTTGAAATTGTTGGTTAAGTCTGATATTTG

Coding sequence (CDS)

ATGTCTCAGACTACTGTCCTCAAGGTTGCTATGTCATGTCAAGGCTGTGTTGGAGCCGTCAAAAGGGTCTTGGGTAAACTGGAAGGAGTCGAAACATTTGACATCGACATAGATGCACAAAAGGTGACCGTGAAAGGCAATGTGCAGCGCGAAGTAGTTTTCCAAACTGTTTCGAAAACCGGGAAGAAGACTGCATACTGGGAGGACGAAGCCCCGGCAGCACCTGCACCAGAGGCAGCCCCAGCAGCCGCTAGCAGCTGA

Protein sequence

MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYWEDEAPAAPAPEAAPAAASS

Homology

[Close]

BLAST of Sed0002633 vs. NCBI nr
Match: KAG6573880.1 (Copper transport protein ATX1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 146.4 bits (368), Expect = 1.2e-31
Identity = 79/85 (92.94%), Postives = 82/85 (96.47%), Query Frame = 0


Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKT 60
          MSQTTVLKVAMSCQGCVGAV+RVLGKLEGVETFDIDIDAQKVTVKGNV+R+VVFQTVSKT
Sbjct: 1  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61 GKKTAYWEDEAP-AAPAPEAAPAAA 85
          GKKTAYWEDEAP AAPAP AA AAA
Sbjct: 61 GKKTAYWEDEAPTAAPAPAAAAAAA 85

[Close]

BLAST of Sed0002633 vs. NCBI nr
Match: XP_038893429.1 (copper transport protein ATX1-like [Benincasa hispida])

HSP 1 Score: 146.4 bits (368), Expect = 1.2e-31
Identity = 77/84 (91.67%), Postives = 80/84 (95.24%), Query Frame = 0


Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKT 60
          MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVE FDIDIDAQKVTVKGNV+REVVFQTVSKT
Sbjct: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVEAFDIDIDAQKVTVKGNVEREVVFQTVSKT 60

Query: 61 GKKTAYWEDEAPAAPAPEAAPAAA 85
          GKKTAYWE++APAA A EA PAAA
Sbjct: 61 GKKTAYWEEDAPAASAKEATPAAA 84

[Close]

BLAST of Sed0002633 vs. NCBI nr
Match: XP_022945074.1 (copper transport protein ATX1-like [Cucurbita moschata])

HSP 1 Score: 146.4 bits (368), Expect = 1.2e-31
Identity = 79/85 (92.94%), Postives = 82/85 (96.47%), Query Frame = 0


Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKT 60
          MSQTTVLKVAMSCQGCVGAV+RVLGKLEGVETFDIDIDAQKVTVKGNV+R+VVFQTVSKT
Sbjct: 1  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61 GKKTAYWEDEAPA-APAPEAAPAAA 85
          GKKTAYWEDEAPA APAP AA AAA
Sbjct: 61 GKKTAYWEDEAPATAPAPAAAAAAA 85

[Close]

BLAST of Sed0002633 vs. NCBI nr
Match: XP_023541206.1 (copper transport protein ATX1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 146.0 bits (367), Expect = 1.5e-31
Identity = 79/85 (92.94%), Postives = 82/85 (96.47%), Query Frame = 0


Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKT 60
          MSQTTVLKVAMSCQGCVGAV+RVLGKLEGVETFDIDIDAQKVTVKGNV+R+VVFQTVSKT
Sbjct: 1  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61 GKKTAYWEDEAP-AAPAPEAAPAAA 85
          GKKTAYWEDEAP AAPAP AA AAA
Sbjct: 61 GKKTAYWEDEAPAAAPAPVAAAAAA 85

[Close]

BLAST of Sed0002633 vs. NCBI nr
Match: XP_022968570.1 (copper transport protein ATX1-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 146.0 bits (367), Expect = 1.5e-31
Identity = 78/85 (91.76%), Postives = 82/85 (96.47%), Query Frame = 0


Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKT 60
          MSQTTVLKVAMSCQGCVGAV+RVLGKLEGV+ FDIDIDAQKVTVKGNV+R+VVFQTVSKT
Sbjct: 1  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVDAFDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61 GKKTAYWEDEAP-AAPAPEAAPAAA 85
          GKKTAYWEDEAP AAPAP AAPAAA
Sbjct: 61 GKKTAYWEDEAPAAAPAPVAAPAAA 85

[Close]

BLAST of Sed0002633 vs. ExPASy Swiss-Prot
Match: O82089 (Copper transport protein CCH OS=Arabidopsis thaliana OX=3702 GN=CCH PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 3.4e-26
Identity = 62/81 (76.54%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKT 60
          M+QT VLKV MSCQGCVGAV RVLGK+EGVE+FDIDI  QKVTVKGNV+ E VFQTVSKT
Sbjct: 1  MAQTVVLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGNVEPEAVFQTVSKT 60

Query: 61 GKKTAYWEDEAPAAPAPEAAP 82
          GKKT+YW  EA A P  EA P
Sbjct: 61 GKKTSYWPVEAEAEPKAEADP 81

[Close]

BLAST of Sed0002633 vs. ExPASy Swiss-Prot
Match: Q94BT9 (Copper transport protein ATX1 OS=Arabidopsis thaliana OX=3702 GN=ATX1 PE=1 SV=2)

HSP 1 Score: 112.8 bits (281), Expect = 1.9e-24
Identity = 56/76 (73.68%), Postives = 65/76 (85.53%), Query Frame = 0


Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKT 60
          MSQT VL+VAM+C+GCVGAVKRVLGK+EGVE+FD+DI  QKVTVKGNVQ + V QTV+KT
Sbjct: 1  MSQTVVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKT 60

Query: 61 GKKTAYWEDEAPAAPA 77
          GKKTA+WE E   A A
Sbjct: 61 GKKTAFWEAEGETAKA 76

[Close]

BLAST of Sed0002633 vs. ExPASy Swiss-Prot
Match: B3H6D0 (Heavy metal-associated isoprenylated plant protein 45 OS=Arabidopsis thaliana OX=3702 GN=HIPP45 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.2e-10
Identity = 31/61 (50.82%), Postives = 41/61 (67.21%), Query Frame = 0


Query: 7  LKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAY 66
          L V M C+GC   V+R + KL+GV+T +ID+D QKVTV G V RE V + V +TG+   Y
Sbjct: 20 LLVDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDREEVLKMVKRTGRTAEY 79

Query: 67 W 68
          W
Sbjct: 80 W 80

[Close]

BLAST of Sed0002633 vs. ExPASy Swiss-Prot
Match: Q84J88 (Heavy metal-associated isoprenylated plant protein 36 OS=Arabidopsis thaliana OX=3702 GN=HIPP36 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.2e-09
Identity = 27/64 (42.19%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 4  TTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKK 63
          T VL+V++ C+GC   +K++L K++GV T +ID+  QKVTV GNV+ E++ + + K G+ 
Sbjct: 31 TWVLRVSIHCEGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEPEILIKKIMKAGRH 90

Query: 64 TAYW 68
             W
Sbjct: 91 AELW 94

[Close]

BLAST of Sed0002633 vs. ExPASy Swiss-Prot
Match: F4JZL7 (Heavy metal-associated isoprenylated plant protein 33 OS=Arabidopsis thaliana OX=3702 GN=HIPP33 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.4e-08
Identity = 31/65 (47.69%), Postives = 40/65 (61.54%), Query Frame = 0


Query: 3  QTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGK 62
          QT VLKV + C GC   VK++L K+EGV T  ID +  KVTV GNV   V+ + + K+GK
Sbjct: 10 QTCVLKVNIHCDGCKQKVKKILQKIEGVFTTKIDAELGKVTVSGNVDPSVLIKKLLKSGK 69

Query: 63 KTAYW 68
              W
Sbjct: 70 HAEIW 74

[Close]

BLAST of Sed0002633 vs. ExPASy TrEMBL
Match: A0A6J1FZY8 (copper transport protein ATX1-like OS=Cucurbita moschata OX=3662 GN=LOC111449423 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 5.6e-32
Identity = 79/85 (92.94%), Postives = 82/85 (96.47%), Query Frame = 0


Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKT 60
          MSQTTVLKVAMSCQGCVGAV+RVLGKLEGVETFDIDIDAQKVTVKGNV+R+VVFQTVSKT
Sbjct: 1  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVETFDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61 GKKTAYWEDEAPA-APAPEAAPAAA 85
          GKKTAYWEDEAPA APAP AA AAA
Sbjct: 61 GKKTAYWEDEAPATAPAPAAAAAAA 85

[Close]

BLAST of Sed0002633 vs. ExPASy TrEMBL
Match: A0A6J1HXJ6 (copper transport protein ATX1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467756 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 7.4e-32
Identity = 78/85 (91.76%), Postives = 82/85 (96.47%), Query Frame = 0


Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKT 60
          MSQTTVLKVAMSCQGCVGAV+RVLGKLEGV+ FDIDIDAQKVTVKGNV+R+VVFQTVSKT
Sbjct: 1  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVDAFDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61 GKKTAYWEDEAP-AAPAPEAAPAAA 85
          GKKTAYWEDEAP AAPAP AAPAAA
Sbjct: 61 GKKTAYWEDEAPAAAPAPVAAPAAA 85

[Close]

BLAST of Sed0002633 vs. ExPASy TrEMBL
Match: A0A6J1HTV3 (copper transport protein ATX1-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111467756 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 9.6e-32
Identity = 79/93 (84.95%), Postives = 83/93 (89.25%), Query Frame = 0


Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKT 60
          MSQTTVLKVAMSCQGCVGAV+RVLGKLEGV+ FDIDIDAQKVTVKGNV+R+VVFQTVSKT
Sbjct: 1  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVDAFDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61 GKKTAYWEDEAP---------AAPAPEAAPAAA 85
          GKKTAYWEDEAP         AAPAPEAAPAAA
Sbjct: 61 GKKTAYWEDEAPAPAPVAAPAAAPAPEAAPAAA 93

[Close]

BLAST of Sed0002633 vs. ExPASy TrEMBL
Match: A0A6J1I011 (copper transport protein ATX1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467756 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.1e-31
Identity = 78/90 (86.67%), Postives = 82/90 (91.11%), Query Frame = 0


Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKT 60
          MSQTTVLKVAMSCQGCVGAV+RVLGKLEGV+ FDIDIDAQKVTVKGNV+R+VVFQTVSKT
Sbjct: 1  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVDAFDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61 GKKTAYWEDEAP------AAPAPEAAPAAA 85
          GKKTAYWEDEAP      AAPAP AAPAAA
Sbjct: 61 GKKTAYWEDEAPAAAAAAAAPAPAAAPAAA 90

[Close]

BLAST of Sed0002633 vs. ExPASy TrEMBL
Match: A0A5A7SZ31 (Copper transport protein ATX1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002050 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 6.2e-31
Identity = 75/86 (87.21%), Postives = 80/86 (93.02%), Query Frame = 0


Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKT 60
          MSQTTVLKVAMSCQGCVGAVKRVLGKLEGV+TFDIDIDAQKVTVKGNV+R+VVFQTVSKT
Sbjct: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVDTFDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61 GKKTAYWEDEAPAAPAPEAAPAAASS 87
          GKKTAYWED+A AAPA   APA A +
Sbjct: 61 GKKTAYWEDDASAAPAATPAPAEAEA 86

[Close]

BLAST of Sed0002633 vs. TAIR 10
Match: AT3G56240.1 (copper chaperone )

HSP 1 Score: 118.6 bits (296), Expect = 2.4e-27
Identity = 62/81 (76.54%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKT 60
          M+QT VLKV MSCQGCVGAV RVLGK+EGVE+FDIDI  QKVTVKGNV+ E VFQTVSKT
Sbjct: 1  MAQTVVLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGNVEPEAVFQTVSKT 60

Query: 61 GKKTAYWEDEAPAAPAPEAAP 82
          GKKT+YW  EA A P  EA P
Sbjct: 61 GKKTSYWPVEAEAEPKAEADP 81

[Close]

BLAST of Sed0002633 vs. TAIR 10
Match: AT1G66240.1 (homolog of anti-oxidant 1 )

HSP 1 Score: 112.8 bits (281), Expect = 1.3e-25
Identity = 56/76 (73.68%), Postives = 65/76 (85.53%), Query Frame = 0


Query: 1   MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKT 60
           MSQT VL+VAM+C+GCVGAVKRVLGK+EGVE+FD+DI  QKVTVKGNVQ + V QTV+KT
Sbjct: 31  MSQTVVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKT 90

Query: 61  GKKTAYWEDEAPAAPA 77
           GKKTA+WE E   A A
Sbjct: 91  GKKTAFWEAEGETAKA 106

[Close]

BLAST of Sed0002633 vs. TAIR 10
Match: AT1G66240.2 (homolog of anti-oxidant 1 )

HSP 1 Score: 99.4 bits (246), Expect = 1.5e-21
Identity = 48/66 (72.73%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 11 MSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYWEDE 70
          M+C+GCVGAVKRVLGK+EGVE+FD+DI  QKVTVKGNVQ + V QTV+KTGKKTA+WE E
Sbjct: 1  MTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKTGKKTAFWEAE 60

Query: 71 APAAPA 77
             A A
Sbjct: 61 GETAKA 66

[Close]

BLAST of Sed0002633 vs. TAIR 10
Match: AT3G56891.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 67.0 bits (162), Expect = 8.4e-12
Identity = 31/61 (50.82%), Postives = 41/61 (67.21%), Query Frame = 0


Query: 7  LKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAY 66
          L V M C+GC   V+R + KL+GV+T +ID+D QKVTV G V RE V + V +TG+   Y
Sbjct: 20 LLVDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDREEVLKMVKRTGRTAEY 79

Query: 67 W 68
          W
Sbjct: 80 W 80

[Close]

BLAST of Sed0002633 vs. TAIR 10
Match: AT5G27690.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 62.8 bits (151), Expect = 1.6e-10
Identity = 27/64 (42.19%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 4  TTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKK 63
          T VL+V++ C+GC   +K++L K++GV T +ID+  QKVTV GNV+ E++ + + K G+ 
Sbjct: 31 TWVLRVSIHCEGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEPEILIKKIMKAGRH 90

Query: 64 TAYW 68
             W
Sbjct: 91 AELW 94

The following BLAST results are available for this feature:

BLAST of Sed0002633 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6573880.1	1.2e-31	92.94	Copper transport protein ATX1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038893429.1	1.2e-31	91.67	copper transport protein ATX1-like [Benincasa hispida]	[more]
XP_022945074.1	1.2e-31	92.94	copper transport protein ATX1-like [Cucurbita moschata]	[more]
XP_023541206.1	1.5e-31	92.94	copper transport protein ATX1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022968570.1	1.5e-31	91.76	copper transport protein ATX1-like isoform X2 [Cucurbita maxima]	[more]

BLAST of Sed0002633 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82089	3.4e-26	76.54	Copper transport protein CCH OS=Arabidopsis thaliana OX=3702 GN=CCH PE=1 SV=1	[more]
Q94BT9	1.9e-24	73.68	Copper transport protein ATX1 OS=Arabidopsis thaliana OX=3702 GN=ATX1 PE=1 SV=2	[more]
B3H6D0	1.2e-10	50.82	Heavy metal-associated isoprenylated plant protein 45 OS=Arabidopsis thaliana OX...	[more]
Q84J88	2.2e-09	42.19	Heavy metal-associated isoprenylated plant protein 36 OS=Arabidopsis thaliana OX...	[more]
F4JZL7	1.4e-08	47.69	Heavy metal-associated isoprenylated plant protein 33 OS=Arabidopsis thaliana OX...	[more]

BLAST of Sed0002633 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FZY8	5.6e-32	92.94	copper transport protein ATX1-like OS=Cucurbita moschata OX=3662 GN=LOC111449423...	[more]
A0A6J1HXJ6	7.4e-32	91.76	copper transport protein ATX1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1HTV3	9.6e-32	84.95	copper transport protein ATX1-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1I011	2.1e-31	86.67	copper transport protein ATX1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A5A7SZ31	6.2e-31	87.21	Copper transport protein ATX1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]

BLAST of Sed0002633 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56240.1	2.4e-27	76.54	copper chaperone	[more]
AT1G66240.1	1.3e-25	73.68	homolog of anti-oxidant 1	[more]
AT1G66240.2	1.5e-21	72.73	homolog of anti-oxidant 1	[more]
AT3G56891.1	8.4e-12	50.82	Heavy metal transport/detoxification superfamily protein	[more]
AT5G27690.1	1.6e-10	42.19	Heavy metal transport/detoxification superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 7..63 e-value: 2.6E-14 score: 53.4
IPR006121	Heavy metal-associated domain, HMA	PROSITE	PS50846	HMA_2	coord: 3..66 score: 13.249659
IPR006121	Heavy metal-associated domain, HMA	CDD	cd00371	HMA	coord: 6..63 e-value: 6.87798E-13 score: 55.6897
None	No IPR available	GENE3D	3.30.70.100		coord: 1..66 e-value: 2.9E-22 score: 80.7
None	No IPR available	PANTHER	PTHR22814	COPPER TRANSPORT PROTEIN ATOX1-RELATED	coord: 1..83
None	No IPR available	PANTHER	PTHR22814:SF310	COPPER TRANSPORT PROTEIN CCH	coord: 1..83
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 2..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002633.1	Sed0002633.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding