Sed0002619 (gene) Chayote v1

Overview


Name	Sed0002619
Type	gene
Organism	Sechium edule (Chayote v1)
Description	PITH domain-containing protein
Location	LG11: 2129861 .. 2140300 (-)
RNA-Seq Expression	Sed0002619
Synteny	Sed0002619

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTATCGGGTATGACCCATCCAAAAATTCGGGTCAAGCCCGATTCCTTCCGGACCCTTCTTCTGCCCCACGCCACCATTTTCAGATCGTCGAAGTTTACACAGAATTCATTTGCCGCTCATTTTTTCCCTTCTCCGCTCCTCCAATTACCCATGGCCGCCGCATCTGCCACCGCCGTTCATCGGAATCAGGTCAGTGATTCAAGTTCTTGCAGCGTTTTGATTCCCAAATTCATGTTTAATCTTCGAGAAATGATGAAATATGACGTTTATACTTGAATCTGACGATTGAGTTTTGAGGATTATTTTTGGTACTGATGTACTTCGTTTTTAACCAGGTTGATCTGTCCGACTTCATTGATTGGTCTAGTGTTGAGTGCCTTAACCAGAATTTCAGCCACACTTTTACTAATGCTCTTAACCAGGTGCTGTTTGTTATTCTTTTGACTTGACCTGTTTGCTAGTTTCATGTACTTCATTGTAGTTTTTGAATTTCTGTACATGGTTAAGTAGCTCGTTTTATAGATTTCATGAAGTTAAAGATGATGCATGGTTCTTTAATACCCAAATGTTGTAGGGTTAGACGGTAGCTTAAATGTTGTAGGGTTAGACGGTAGCTTAGCTGGTATGGATACCCACAAATATCAAAAAAGAAAAAAAAGAAGATGGTGCATAGTTAGACTAGCGTTTTGAAGAATATAATTTACTTCTCGCTATCTTTATAATTGCAAATCTTTTGAATTTTAAAATCTTTATGAGAAACTTTATGTGGGAATGGTGTAAAGGGGTAGGGGGCTGAATTTGCTAAGATGGGAAGTTCTGGCCATGGGGGGACAAGATTGGGCTAAGTGGGTGTGGTGGCTGTACCTTGAGGCATATGATTTTCGTAAGGATGACTGTACCTTGAGGGGTGGGTCACATCTGCGGTCTCTGAACTAAAGGCGTGTGTGAAGTCCTTGGACAGCCATTTGTATTGCTTACTAAGGTTTATAAACTACGTTAACTTCTATGTCGGGAACAGGGCTTGCATTCCTTTATGGGAAGGATTTTGTGTTGGTATCAACTTCTTCAAAACTTCTCTTTTCAGCTTTATAATATTTCTCTTTAAAAAGAGATTTTGGTCAATTCATTGTTAACTTGTAACAATGAACTTCCTTCCCTCTCGGTTTGATTTTTGACTTCACAAGATTTGCTTAATCTTTCTCAATGTTTTGTATTACACGTTTTTTTGGGTTTTTTACCCCCTCCCTCATCTTTCACAGTTTCACTCTAATTTTGAAGGCTAAAATCTCAACAAAAAAATTATTTCATATTTCTGTGGGAAGGTTAGACACACACACACCATAGTTTTGGTTTAAAAGTCTTCATCTATGGTTCTTGGTCCTCAGTAGTGTGTTGTACATGAAAGCAATACAAGTTAAAGATCATTTGCTACAGAGATGTCTCTTTGTCGCGAAACTTAAGAGTTGATTTTTGCATGTACACACACACACCTATAAGGGTCTTATTTAGAATGACAGGCATGCAAATTTTTTTGCTATTTTGTTGTCTATAGTTTGAAAGAAATTAAGTATTTTAAGGGTACAAACTCTTATACCGAGGGTTTGAAAGCAACTCTTTTCTTAAATTAGACTTGTAGGGATAATGATAGCTTGCATTTGGAGAGTGATGCGGATGAGCAGCTTTTGATATACATACCTTTTAACCAAGTCGTTAAATTGCATTCCTTAGTCATTAAGGGACCTGAAGAGGAAGGTGAGTACTCTATTACACCTTTTATGAATTCTAATTCATGTTTTATTTTCTACTGGACATTTCAGCACTGCTTGCAAGTTGCATGTATAATTATAGGTCATCTAAACTATTGGCATAAATTTTTTTTGTAATATGCCTTGCATATCCAATGTGCCCTGTGAGAGTATGGTAATTCCATTTTAAATTCTTACTATTTGATTATATATTTTTTGGGCTACCACTCCCTCCCTTGTCCCTTCAGTGCTCTAGTCTAGTAAATTCCTTATCATACCACTGTTTTTGATATGGTGAGGGTGTATTGGACTATAGACAGAGATATAGAAACTTTTTCAGGGTTAGAAAGAAATTCAACCTTGAGTTCGGAGGTGGATTAAAATTCTTTCCTTGGCTTTCAATCAAAACTTTTGTAATTATCTCTTTTTTAGTCTCCGCCAATTGACAAGTTCTTTTTTTTCAAGTAATTCTTGGCTGTGGTAGGATATCTCTAAATTCTCCCTGCCCTTTGGTTACTCTCATACCTCTATATATTTCTTTCTCTCTCTTATTAAATGAAAAGGTACTGTGAATCTGTCATGGAATGCTGGAATCATTTAACCAGGAAAAATTGCTCTCTTTTATTCTGCTTAACTGACAAATTGCAAGATTCTTATATTGAGGTTGTTCTCCAGGCCCTAGGACTGTAAAGCTTTTCTCAAACAAGGAGCATATGGGATTTGGGTAAACTAATTGTGTTCTTTATTTGATATTCGGTGCAAGTGTTTTCTAAATATCACTTGATGATGGTCAATTTGTCTGTTTCATGTACATTGCAGCAACGTCAATGACTACCCTCCCAGCGACACGATTGTATTTTCCCCAGATAATCTTACGGTAGATTTTCCCATACTTGTACCTGTGTCTCATCACAAAAATGGACAAGTCTTTTAGGAGAGTCATACACAGGAATTGGGACATCATTGTTTTATTGTCATGCTTTGTAGGGAAAGCCAGAAGTTGTGAAGTACGTGAAATTTCAAAATGTTCGCAGGTAAGTCATTTGTGTCAATAATGTTCATTGTCTTGATTTAGATCCGTATTTGGAAGTATCAGTTGATTGTTCTGAATAATTTGAATTTTTATCAGCTTGACAATTTTTATAGAAGATAACCAATCTGGAGCTGACACTACAAAAGTTCAAAAGATTGGCTTGTATGGAACAACGTAAGTTGTTTTAACAATTTCTTTATATTTCATTCGACTTTCGAGTTAATTTGATCTTCTGTTTTTCCTTTGCTATGCTTTAACTGAATTACTCTATTGCACAATCAGCAAGCTGAGATAAAATGAGTTTATATTTTAATTACTTTGTCTAACAACTGAGTGAATACATGTGAGCGCACACGTCCAAAGGGGTCAGAACACCCCCACTCACACTTCACACAATTGTTCTCAAGGTCTCACTCTAAGTCATGATTGTGGGTTGATAGGTAATTGGGTTGACCTGGAGGGTAAGGTCGGATATTTTAATTGGGTTTTTAGGTTGTTGGTTTCTAATCTAACTTTTTGAACAATGACCTAGTGGCAAAAGGTTATGAGTTTAATCTATGATGATAACCACCTACCTAGGAAATAATTTTCTTCGAATTTCTTTGACGTCCAAATGTTCTAAGGTCAGGTGAACATATCTGTCAAAATAGTCGTGGTGCGCGTAAGCTAGCCTAGATATTCATGAAAAAAAATCTGCCCTTTTTGTGCATTCCTTGAGGTTATTTGGATTTTACATACAAGCATGTCTTCTATTAAAAACCGGTGTTTGACACTGGTCAAGGATGAATAAATTATGGAAGTTATGATTTTGTCATTTGTGTTTATGGACAACTTGGGAGTAGTTAAAGAAAGCTCAGGACTCAAAATGAAGTATACTTGAGGTGATTTTTATTTGTGCTATGATATTCTCAAAAGGTAAGACTAAAGCCTTAATGCAGGGGATGCACCATATATTTATTTCTTCGATATAATTAGACGATGTCGATGGTAGAATAAAAGCCCTTGATAGAAAGAATTCTTGGTCATTTTCTACCTGAGCTTTGGCTCACGAGACGTTTGAGGTATCACGTCATTATGCCAGTAGTCTTTATCACAAACTTAAATTTTCTTTTGAGGATGCCAAATGTGAAATGTGCCTGAAAAAGCTCCTTTCTTGGACTTTTGATTTCAACAATCATGAATTGATATTGGCTAATGAAGATTTTAAATCTCATCTCTTTCTTTTATAGATTATTGAATTAATATACGTATTTTTTAATCGGGTAGTATTAATATAATGAATTGTCCCCTTGAGTTCCTTTTTCCTATTTTATTCCATGTTTTTTTTTGGTGAGAAAGATATAGTAGAATTTGTAAGGACTATGGTAGGAATTACCAATTTTATTATCAAAACAACAAGAACAGGGGATTCAAGAGCCCCTCACTCTCCAATCTCAATCTCAAAGAGATAACCTAGACAAATGAATTTTTGAATGACTTTCCCTTACTCCTACCCGACTATTTATACTAACCAACTCAACAACCTTCCCACGCACTTCACACGCACGAGCTCACAACTCCACACGCACGTGCTCACACCCCCACTCTCACTTTCTTACGCCTAGAATAAACGTACTTAATGGCTGGGGTCGTATTAATACCCGCCCCCCAAAGAACCACCTTGTCCTCAAGGTGGAAGTCAGGGTATTGAGCATGAATGAAACTAGCGCACTCCCAAGTCGCATCCTCAGGCAAGCCACCTTCCCACTGAATCAAGACCTCCCGGTCCCCTTCCACAGACGTGGATTCCCGCATGCCCAACACTGCCATCGACCGGAACACAAACCCCAAATCATCCTGCAATCCCGAAGGAACAGGAAACACGGGCAACGAAGTCCCAACCGCTTTACGCAACACCGAAACATGGAACACCGGATGAATGCGCACAGAATCTGGTAAGTCCAATCGATATGCTAACTTGCCAACCCGAGCTATAACTCGGTACGGACCAATAAAACGAGGCGCCAGTTTCGGATGTTTAAACTTTGCTAGCGAAAGCTGCCGATATGGCCGTAACTTCAAGTACACCCGATCACCCACTGCAAACTGAACATCCCGGCGTTTAGCATTAGCCTGTTTGGACATAAGTTGTTGAGCACGCCCAAGGGAAGCCTTGAGTGTAAGCAGCATCTTATCACGATCGACCAATAAGGAATCCACCGCCGATAAAGCACTCTGACCCATCTCATACCCCAAAATGGGCGGTGGGGCACGACCATAAACCGCCTCAAACGGAGTTAACCGAGCAGACGAATGATAAGACGAGTTATAACTATACTCGGCCCACGGAATCCACTTGGACCACTGCTTGGGTTGAGTCATGACAAAGCAACGAAGATACGATTCCAAGCAACGATTAACAACCTCTGTTTGCCCATCCGATTGCGGGTGATATGTCGTACTACGACGGAGTTTTGTGCCTGTGGCACGAAACAACTCTTCCCAAAACGAACTCGTAAAGACCTTATCGCGATCAGAAACAATACTACGCGGCATGCCATGTAACCGCACGACCTCCCTGATAAAAAGAGACGCAATGGACAACGATGTATAAGGGTGCTTGACTAACAGGAAATGCGCATATTTGGACAACCGATCGACCACCACCAAAAGCAAGATCAAACCCTCGTAACGAGGAAGTCCTTCCACAAAATCCATAGACACATCTTCCCGCATTCGCCAGAATCGGTAATGGTTCTGATGGCTTACTGGGGCGAGGATGATACTTAGCTTGAACACAAATAGCACATTCCGCCACAAACGACCGCACACGAGCTTTCATACCCACCCAATAAACCTCCTTAGCCAAGCGTTGATACGTCTTAAGGGCACCGTGATGTCCCCCAATCGGCCCCGAGTGAAATTCCTGTAAGAGTAAGGGAATAGTAGGCGAATCCGGCGGCAGAACCAAACGATCGTTAAAACACAACACTCCCCGAAGTAAAGAAAAACCTTTTGGGGCTGCCTCGCCGTTTAACAATGCGGTATAAATGGTCATCAAGTGTGGATTCGCCTTTACCTGCTCTAAAAACACCTCTGTGTTAACGCCCGATACGTAACTCAGCATTCCTAACTCACAGGCCAAAGGAAGACGCGACGATTGCATCAACAAACCAATTCTCCAAACCCTTCTTATATTCAATATGAAAATCATAACCCAACAATTTAGTAACCCAACGTTGATACTCACCATCAATCACACGTTGTTCCAGCAAGAATTTAAGGCTTTTCTGATCCGTACGCACAACAAAATGCTGACCAAGCAAATATGCCCTCCATCGTTGAACCGCAAACACTATAGCCATCAACTCGCGTTCATAGACCGACTTACTACGATGTGTAATCGGTAGAGCGCGACTAAAATAAGCGAGAGGTCGACCCTCTTGCATCAAAACGGCCCCAAGTCCAATGCCTGAAGCATCCGTCTCGACCACGAATGGTTGAGAGAAATCGGGTAACCTTAGCACTGGAACACTCACCATAGCATGCTTCAGCCGCTGAAACGAATCCTCAGCATCTGCACTCCACAAAAATTTCCCTTTCTTCAATAATTGCGTTAACGGAAATGCCATAGTACCATAATTGGCCACAAAACGCCTATAATACCCCGTCAATCCCAGAAACCCCCGCAGCTCCTTGATGGAGAGAGGGCTCGGCCAATTCACCATAGCCTTCAACTTCGCAGGATCGGCTGAGACCCCTTCCGATGAAATAAAATGACCCAGATATTCAATACGCGCCACCCCAAACTGGCATTTCTTGGCATTGGCCACAAACTGATGATGCTTAAGCACCTCGAACACCTGAGTTAAATGTGACAGATGCTCCTCCACGGACACGCTATAAACCAATATATCATCAAAGAAAACCAAAACAAACTTCCGTAAGTATGGACGCAAAATCTCGTTCATTACCGACTGGAAGGTAGCTGGGGCATTTCGCAACCCGAAAGGCATTACTAAAAACTCATAATGCCCCTCATGAGTTCGAAAAGCTGTTTTCGGAATGTTAGCTGGTCGAACTCGAATCTGATGATACCCCGCCTTAAGATCAATCTTGGAAAAAACCACTGCTCCATGCAGCTCATCTAATAACTCGTCAACTAAAGGAATAGGAAACTTATCCGCATGAGAACCAAATTCAAGGCCCTATAATCCACACGTAACCGCCAACTTCCATCTTTCTTTTTTACCAACAACACCGGGCTCGAAAAAGAACTAGTACTCGGGCGTATAATACCTGCTAATAGCATATCCTTTACAAGTCGTTCTATCTCATTCTTTTGAAACTGGGGATATCTATACGGCCGCACGTTAACTGATTCCTTACCCGCATACAACTCTATAGCATGGTCGCAACTTCACTGAGGCGGTAGCCGCAACGGCTCAAAGATCTTTGCGTACTGGGACAACAACGGTTGTAATTCCGCTGGCGTATCTGTCCAGCGATGAACCAACTCTGGCTTACTTTCAGGTGTGGATGCAATGTCCAACAAATTAAGCTCAATTAAAAGACCGTGATCCTCTACACGTAACGATTTCATCATAGACTTCAGAGAAACCTGAGCCTTCACCAAACTAGGATCTCCTCAGAATCAGACGCTCCACGGACCCACCACAAAACGCATCTGCAGAACACGATAATCAAATTCTACCTTCCCCAATGTTTCCAACCACGCAACACCGAGAATAACGTCCGCACTGCCCAAGGGCAAGGGCAAAAAATCATGAACCACCCTTAGCTCTGCCATCTGTAGCGCCACGTCCTTGCATACCCCTGCTGCTCTCACCGAGTCTCCAGTCCCCAAAACTATTCCATAATCATTTGACGCTGCAACCGACAGTCCCAATCTCGACACCAATTCCTCAGAAATGAAATTATGAGTCGCCCGCGTCGTCGACAAGAACTACCACATCCATCCCTAAAATATTACCACGCACCTTCAAAGTCTTCGGAGAGCTTAGGCCAGCTAACGAATTCAATGATAACGTTGCCATCTCATGATCCATTTCAGCTTCACCCAAATCCACTCCTTCGGAAACATCTTCCGAGAGATCTATCACTATCCTCGTTTCTCCACCTCAATTTCGTCCGAACCACCAACACTTGTAATGCTTGCAATTCAGTTTTCTTGCACTTGTGACCAGGAAAGAACTTATCATCACAACGAAAACATAAGCCCTTATCTTTCTTGGCTCGGATTTCGCTATCCGTCAATCGCTTAAAAGGACCCTTCAAACCCGATGTATTAACACTCACTGTTGTGGACGAACTACTGTTCAAACGACGTGGTGAGAAAGTGAACGAGCGCAAATTCGAGTTGCTCGAACCACCCGAGCTGGATGATCCCGAACTACAAGAAGCAACACTACTCTTCCCTGACCCCACACTAGTAGACTCGAGTCTCCTCTTTGCTTGTACTGCAAAATCGTCTTCGATCAGTTGCGCCATAAGCATTTTTGCTTTCAAACCTATTGGGCAAAGCTTCCTCATCTCGCTTTGGACCTCTTTTTTAAGTCCACTTTCGAATTTTCCTTCCAACAACTTCTCACTTAAATCCTTCAACCCGATCGAATATTTCTCAAACAATCGACGGTAGGGTCTTGATCTGTACCAACTTGTTGAAGACTCATCAAGCGAGCATATCTATTTACTTGTGAAGTTGGCTGAAATCGTTCCAATAACAACACTCGAAAATCACTCCACGAGCGAATAGAAGAGCGATCTTCCTCATATTGATGCCAATCTAATGCTTCTCGTTCTAAGCACATCACTGCGGCATCCAATTTATCACTCTCTGAGAGCCGATTAACCAGAAAATACCTCTCAACACGATGCAACCACCCTATCGGATCTTCGTCCTCTGTTCCTTTAAACACCGGAACCTCCAGCTTCCTTAAACGCATATCGAACAATGGCACTTCCTTGCTCGTTGGTGCTTGAATGCCGACTTTCGCAACTTCCAGCTGAATCGACGACGACTCGCCAATTCTCGGCAATTCGGCACGCTGAACTCTCAAACTCTGCTCACTTGCACACGGAAAACCTTCAATCGTCGGCTTCAATGGAGGCGCTTCCATCTGCGCGACATTCTTTCCCTTCCCCGTCGCCGAGATCTCGCCGATCACCTCCTGCTTTCGCGTCGCCGCGAAACCGAGATCTCATTTCCTCCCTCAGCAATTCGAATTGAAGATCTCTACGTACCTCAGACGCCTTCTGCTTCTCCTCCAATGCCGCGAACTGCGTCGTGATCTGCGATTCCAGATCTTGCTGCTTCGACGCCACGGTTTCGGCCACATCTTCCACGGATTTCAGACGTTGATCCAATTTCCCAGTCATCTTCCGATCGACAAGCGCTCTGATACCAAAATTGGTAGGAATTACCAATTTTATTATCAAAACAACAAGAACAGGGGATTCAAGAGCCCCTCACTCTCCAATCTCAAAGAGATAACCTAGACAAATGAATTTTTGAATGACTTTCCCTTACTCCTACCCGACTATTTATACTAACCAACTCAACAACCTTCCCACGCACTTCACACGCACGAGCTCACAACTCCACACGCACGTGCTCACACCCCCACTCTCACTTTCTTACGCCTAGAATAAACGTACTTAATGGCTGGGGTCGTATCAGACTACACTTCTGATGATTTCCTTGATTTGATTTCTTTTTTCATTCTTTGTATTAGCATACTAAAAATTAACACCTTTTTAGTGATTATAGACTTTTTTCTTCTTTGATTTCCAATTGAAAAGCTGTACAACCTTGGCTTTCACGATTTCTTTATTTCATTTATCGATGAAATTTGTTTCTATGATACGAGTATTATACTTTAGGTAACAACATCGGAGTGCGAACTACGGTTCTACATGAATTACGTGGACTATCTCATGTACTATAGTCTAAATTTACCTTCTCAATTTTACGATTATGGTCCATGGTGGGATTGGAATAGAGGAAAACGCGTTCAACTCCATTTTATTAGTTCTTTAAGCTTTGGTGAAATATTGAAGTTGTTGGTCTATCATGCAGGGTTGAAACAACAGACATGAAGGGTTTAAAGAAGATCGAGGATCACTAAATGGCTAACTAGACGAATCACGACTCGCTCGTATACGATTGTGAGTAATTGATATCAAAGATCAATTTGCCATAAAGATAAGAACCATATTAAGGCTTCTAGAATTTTGATGAGATCGTATCGTATCGTATACCTGTTCGATTGGTGGCGTTGTGTTGCTTGTTCAATATTTCACACCTATGCACACTGTTAGGTATTTTGCAAGGAGGATATTTTAGTGATAAACTGTCTCAATGGTTGAGATTAAATGTGGCCATTTTAGAGAATACAGGGGCCATTGGTTTATGTATGATTTATTCTCAATAAGGTTGTTCCAACCATACTATTAAATGGCTCTTTAAAATCATCTTAGGTGAGAATTTGAGATTCTCTGTGACTGAATTAATAAATGACAAATAATGCAACTCTGAACTACTACTACTACTACTAACCTGTACATGCTGAGTTATTAGCATGCACCTGCCCCCACCACCAGTCATGATATTTGAAAAGTCAATTTCAAAAGTTGAGGTTTGTTGATAACCATTTGGTTTT

mRNA sequence

GTTATCGGGTATGACCCATCCAAAAATTCGGGTCAAGCCCGATTCCTTCCGGACCCTTCTTCTGCCCCACGCCACCATTTTCAGATCGTCGAAGTTTACACAGAATTCATTTGCCGCTCATTTTTTCCCTTCTCCGCTCCTCCAATTACCCATGGCCGCCGCATCTGCCACCGCCGTTCATCGGAATCAGGTTGATCTGTCCGACTTCATTGATTGGTCTAGTGTTGAGTGCCTTAACCAGAATTTCAGCCACACTTTTACTAATGCTCTTAACCAGACTTGTAGGGATAATGATAGCTTGCATTTGGAGAGTGATGCGGATGAGCAGCTTTTGATATACATACCTTTTAACCAAGTCGTTAAATTGCATTCCTTAGTCATTAAGGGACCTGAAGAGGAAGGCCCTAGGACTGTAAAGCTTTTCTCAAACAAGGAGCATATGGGATTTGGCAACGTCAATGACTACCCTCCCAGCGACACGATTGTATTTTCCCCAGATAATCTTACGGGAAAGCCAGAAGTTGTGAAGTACGTGAAATTTCAAAATGTTCGCAGCTTGACAATTTTTATAGAAGATAACCAATCTGGAGCTGACACTACAAAAGTTCAAAAGATTGGCTTGTATGGAACAACGGTTGAAACAACAGACATGAAGGGTTTAAAGAAGATCGAGGATCACTAAATGGCTAACTAGACGAATCACGACTCGCTCGTATACGATTGTGAGTAATTGATATCAAAGATCAATTTGCCATAAAGATAAGAACCATATTAAGGCTTCTAGAATTTTGATGAGATCGTATCGTATCGTATACCTGTTCGATTGGTGGCGTTGTGTTGCTTGTTCAATATTTCACACCTATGCACACTGTTAGGTATTTTGCAAGGAGGATATTTTAGTGATAAACTGTCTCAATGGTTGAGATTAAATGTGGCCATTTTAGAGAATACAGGGGCCATTGGTTTATGTATGATTTATTCTCAATAAGGTTGTTCCAACCATACTATTAAATGGCTCTTTAAAATCATCTTAGGTGAGAATTTGAGATTCTCTGTGACTGAATTAATAAATGACAAATAATGCAACTCTGAACTACTACTACTACTACTAACCTGTACATGCTGAGTTATTAGCATGCACCTGCCCCCACCACCAGTCATGATATTTGAAAAGTCAATTTCAAAAGTTGAGGTTTGTTGATAACCATTTGGTTTT

Coding sequence (CDS)

ATGACCCATCCAAAAATTCGGGTCAAGCCCGATTCCTTCCGGACCCTTCTTCTGCCCCACGCCACCATTTTCAGATCGTCGAAGTTTACACAGAATTCATTTGCCGCTCATTTTTTCCCTTCTCCGCTCCTCCAATTACCCATGGCCGCCGCATCTGCCACCGCCGTTCATCGGAATCAGGTTGATCTGTCCGACTTCATTGATTGGTCTAGTGTTGAGTGCCTTAACCAGAATTTCAGCCACACTTTTACTAATGCTCTTAACCAGACTTGTAGGGATAATGATAGCTTGCATTTGGAGAGTGATGCGGATGAGCAGCTTTTGATATACATACCTTTTAACCAAGTCGTTAAATTGCATTCCTTAGTCATTAAGGGACCTGAAGAGGAAGGCCCTAGGACTGTAAAGCTTTTCTCAAACAAGGAGCATATGGGATTTGGCAACGTCAATGACTACCCTCCCAGCGACACGATTGTATTTTCCCCAGATAATCTTACGGGAAAGCCAGAAGTTGTGAAGTACGTGAAATTTCAAAATGTTCGCAGCTTGACAATTTTTATAGAAGATAACCAATCTGGAGCTGACACTACAAAAGTTCAAAAGATTGGCTTGTATGGAACAACGGTTGAAACAACAGACATGAAGGGTTTAAAGAAGATCGAGGATCACTAA

Protein sequence

MTHPKIRVKPDSFRTLLLPHATIFRSSKFTQNSFAAHFFPSPLLQLPMAAASATAVHRNQVDLSDFIDWSSVECLNQNFSHTFTNALNQTCRDNDSLHLESDADEQLLIYIPFNQVVKLHSLVIKGPEEEGPRTVKLFSNKEHMGFGNVNDYPPSDTIVFSPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIGLYGTTVETTDMKGLKKIEDH

Homology

[Close]

BLAST of Sed0002619 vs. NCBI nr
Match: XP_038891254.1 (PITH domain-containing protein At3g04780 [Benincasa hispida])

HSP 1 Score: 341.7 bits (875), Expect = 4.9e-90
Identity = 166/176 (94.32%), Postives = 171/176 (97.16%), Query Frame = 0


Query: 48  MAAASATAVHRNQVDLSDFIDWSSVECLNQNFSHTFTNALNQTCRDNDSLHLESDADEQL 107
           MAAASAT +HRNQVDLSDFI+WS VECLNQNFSHTFTNALNQTCRDNDSL LESDADEQL
Sbjct: 1   MAAASATGIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL 60

Query: 108 LIYIPFNQVVKLHSLVIKGPEEEGPRTVKLFSNKEHMGFGNVNDYPPSDTIVFSPDNLTG 167
           LIYIPFNQV+KLHSLVIKGPEEEGPRTVKLFSNKE+MGFGNVNDYPPSDTIV SPDNLTG
Sbjct: 61  LIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG 120

Query: 168 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIGLYGTTVETTDMKGLKKIEDH 224
           KPEVVKYVKFQNVRSLTIFIEDNQSGADTTK+QKI LYGTTVETTDMKGLKKIEDH
Sbjct: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKIQKIALYGTTVETTDMKGLKKIEDH 176

[Close]

BLAST of Sed0002619 vs. NCBI nr
Match: XP_022946891.1 (PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_022946892.1 PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_022946893.1 PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_022999328.1 PITH domain-containing protein At3g04780-like [Cucurbita maxima] >XP_022999329.1 PITH domain-containing protein At3g04780-like [Cucurbita maxima] >XP_023521729.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023521946.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023545536.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023545537.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023545538.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >KAG6599300.1 PITH domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030300.1 PITH domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 341.7 bits (875), Expect = 4.9e-90
Identity = 167/176 (94.89%), Postives = 171/176 (97.16%), Query Frame = 0


Query: 48  MAAASATAVHRNQVDLSDFIDWSSVECLNQNFSHTFTNALNQTCRDNDSLHLESDADEQL 107
           MAAASATA+HRNQVDLSDFI+WS VECLNQNFSHTFTNALNQTCRDNDSL LESDADEQL
Sbjct: 1   MAAASATAIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL 60

Query: 108 LIYIPFNQVVKLHSLVIKGPEEEGPRTVKLFSNKEHMGFGNVNDYPPSDTIVFSPDNLTG 167
           LIYIPFNQV+KLHSLVIKGPEEEGPRTVKLFSNKE+MGFGNVNDYPPSDTIV SPDNLTG
Sbjct: 61  LIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG 120

Query: 168 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIGLYGTTVETTDMKGLKKIEDH 224
           KPEVVKYVKFQNVRSLTIFIEDNQSGAD TKVQKI LYGTTVETTDMKGLKKIEDH
Sbjct: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADVTKVQKIALYGTTVETTDMKGLKKIEDH 176

[Close]

BLAST of Sed0002619 vs. NCBI nr
Match: XP_008455826.1 (PREDICTED: PITH domain-containing protein At3g04780 [Cucumis melo] >KAA0063617.1 PITH domain-containing protein [Cucumis melo var. makuwa] >TYK18409.1 PITH domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 339.3 bits (869), Expect = 2.4e-89
Identity = 166/176 (94.32%), Postives = 171/176 (97.16%), Query Frame = 0


Query: 48  MAAASATAVHRNQVDLSDFIDWSSVECLNQNFSHTFTNALNQTCRDNDSLHLESDADEQL 107
           MAAASATA++RNQVDLSDFI+WS VECLNQNFSHTFTNALNQTCRDNDSL LESDADEQL
Sbjct: 1   MAAASATAINRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL 60

Query: 108 LIYIPFNQVVKLHSLVIKGPEEEGPRTVKLFSNKEHMGFGNVNDYPPSDTIVFSPDNLTG 167
           LIYIPFNQVVKLHSLVIKGPEEEGPRTVKLFSNKE+MGFGNVNDYPPSDTIV SPDNLTG
Sbjct: 61  LIYIPFNQVVKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG 120

Query: 168 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIGLYGTTVETTDMKGLKKIEDH 224
           KPEVVKYVKFQNVRSLTIFIEDNQSG DTTK+QKI LYGTTVETTDMKGLKKIEDH
Sbjct: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKIEDH 176

[Close]

BLAST of Sed0002619 vs. NCBI nr
Match: XP_022937687.1 (PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_023521129.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo] >XP_023537940.1 PITH domain-containing protein At3g04780-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 339.3 bits (869), Expect = 2.4e-89
Identity = 164/176 (93.18%), Postives = 172/176 (97.73%), Query Frame = 0


Query: 48  MAAASATAVHRNQVDLSDFIDWSSVECLNQNFSHTFTNALNQTCRDNDSLHLESDADEQL 107
           MAAASATA+HRNQVDLSDFI+WS +ECLNQNFSHTFTNAL+QTCRDNDSL LESDADEQ+
Sbjct: 1   MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQI 60

Query: 108 LIYIPFNQVVKLHSLVIKGPEEEGPRTVKLFSNKEHMGFGNVNDYPPSDTIVFSPDNLTG 167
           L+YIPFNQV+KLHSLVIKGPEEEGPRTVKLFSNKE+MGFGNVNDYPPSDTIV SPDNLTG
Sbjct: 61  LMYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG 120

Query: 168 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIGLYGTTVETTDMKGLKKIEDH 224
           KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKI LYGTTVETTDMKGLKKIEDH
Sbjct: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTTVETTDMKGLKKIEDH 176

[Close]

BLAST of Sed0002619 vs. NCBI nr
Match: XP_022965977.1 (PITH domain-containing protein At3g04780-like [Cucurbita maxima])

HSP 1 Score: 335.9 bits (860), Expect = 2.7e-88
Identity = 163/176 (92.61%), Postives = 171/176 (97.16%), Query Frame = 0


Query: 48  MAAASATAVHRNQVDLSDFIDWSSVECLNQNFSHTFTNALNQTCRDNDSLHLESDADEQL 107
           MAAASATA+HRNQVDLSDFI+WS +ECLNQNFSHTFTNAL+QTCRDNDSL LESDADEQ+
Sbjct: 1   MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQI 60

Query: 108 LIYIPFNQVVKLHSLVIKGPEEEGPRTVKLFSNKEHMGFGNVNDYPPSDTIVFSPDNLTG 167
           L+YIPFNQV+KLHSLVIKG EEEGPRTVKLFSNKE+MGFGNVNDYPPSDTIV SPDNLTG
Sbjct: 61  LMYIPFNQVIKLHSLVIKGHEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG 120

Query: 168 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIGLYGTTVETTDMKGLKKIEDH 224
           KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKI LYGTTVETTDMKGLKKIEDH
Sbjct: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTTVETTDMKGLKKIEDH 176

[Close]

BLAST of Sed0002619 vs. ExPASy Swiss-Prot
Match: Q9SQZ9 (PITH domain-containing protein At3g04780 OS=Arabidopsis thaliana OX=3702 GN=At3g04780 PE=1 SV=2)

HSP 1 Score: 268.1 bits (684), Expect = 9.0e-71
Identity = 130/176 (73.86%), Postives = 149/176 (84.66%), Query Frame = 0


Query: 48  MAAASATAVHRNQVDLSDFIDWSSVECLNQNFSHTFTNALNQTCRDNDSLHLESDADEQL 107
           M+A SA+ + + QVDL DFIDWS VECLNQ+ SH+  NAL Q  R+++ L+LESDADEQL
Sbjct: 1   MSAESASQIPKGQVDLLDFIDWSGVECLNQSSSHSLPNALKQGYREDEGLNLESDADEQL 60

Query: 108 LIYIPFNQVVKLHSLVIKGPEEEGPRTVKLFSNKEHMGFGNVNDYPPSDTIVFSPDNLTG 167
           LIYIPFNQV+KLHS  IKGPEEEGP+TVK FSNKEHM F NVND+PPSDT   + +NL G
Sbjct: 61  LIYIPFNQVIKLHSFAIKGPEEEGPKTVKFFSNKEHMCFSNVNDFPPSDTAELTEENLKG 120

Query: 168 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIGLYGTTVETTDMKGLKKIEDH 224
           KP V+KYVKFQNVRSLTIFIE NQSG++ TKVQKI LYG+TVETTDMKGLKKIEDH
Sbjct: 121 KPVVLKYVKFQNVRSLTIFIEANQSGSEVTKVQKIALYGSTVETTDMKGLKKIEDH 176

[Close]

BLAST of Sed0002619 vs. ExPASy Swiss-Prot
Match: O43396 (Thioredoxin-like protein 1 OS=Homo sapiens OX=9606 GN=TXNL1 PE=1 SV=3)

HSP 1 Score: 116.3 bits (290), Expect = 4.4e-25
Identity = 65/170 (38.24%), Postives = 98/170 (57.65%), Query Frame = 0


Query: 54  TAVHRNQVDLSDFIDWSSVECLNQNFSHTFTNALNQTCRDNDSLHLESDADEQLLIYIPF 113
           T + +  +DL  FI+ +  ECLN++  H F N     C   D+  LESD DEQLLI + F
Sbjct: 117 TDIPKGYMDLMPFINKAGCECLNESDEHGFDN-----CLRKDTTFLESDCDEQLLITVAF 176

Query: 114 NQVVKLHSLVIKGPEE-EGPRTVKLFSN-KEHMGFGNVNDYPPSDTIVFSPDNLTGKPEV 173
           NQ VKL+S+  +GP+  +GP+ VK+F N    M F       P+  +  + D++     V
Sbjct: 177 NQPVKLYSMKFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIV 236

Query: 174 -VKYVKFQNVRSLTIFIEDNQSGADTTKVQKIGLYGTTVETTDMKGLKKI 221
            ++YVKFQNV S+TIF++ NQ   +TT++      GT V+ T+M   K++
Sbjct: 237 PLRYVKFQNVNSVTIFVQSNQGEEETTRISYFTFIGTPVQATNMNDFKRV 281

[Close]

BLAST of Sed0002619 vs. ExPASy Swiss-Prot
Match: Q920J4 (Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3)

HSP 1 Score: 114.0 bits (284), Expect = 2.2e-24
Identity = 64/170 (37.65%), Postives = 97/170 (57.06%), Query Frame = 0


Query: 54  TAVHRNQVDLSDFIDWSSVECLNQNFSHTFTNALNQTCRDNDSLHLESDADEQLLIYIPF 113
           T + +  +DL  FI+ +  ECLN++  H F N     C   D   LESD DEQLLI + F
Sbjct: 117 TDIPKGYMDLMPFINKAGCECLNESDEHGFDN-----CLRKDLSFLESDCDEQLLITVAF 176

Query: 114 NQVVKLHSLVIKGPEE-EGPRTVKLFSN-KEHMGFGNVNDYPPSDTIVFSPDNLTGKPEV 173
           NQ VKL+S+  +GP+  +GP+ VK+F N    M F       P+  +  + D++     V
Sbjct: 177 NQPVKLYSMKFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIV 236

Query: 174 -VKYVKFQNVRSLTIFIEDNQSGADTTKVQKIGLYGTTVETTDMKGLKKI 221
            ++YVKFQNV S+T+F++ NQ   +TT++      GT V+ T+M   K++
Sbjct: 237 PLRYVKFQNVNSVTLFVQSNQGEEETTRISYFTFIGTPVQATNMNDFKRV 281

[Close]

BLAST of Sed0002619 vs. ExPASy Swiss-Prot
Match: Q8CDN6 (Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=3)

HSP 1 Score: 113.2 bits (282), Expect = 3.7e-24
Identity = 63/168 (37.50%), Postives = 96/168 (57.14%), Query Frame = 0


Query: 56  VHRNQVDLSDFIDWSSVECLNQNFSHTFTNALNQTCRDNDSLHLESDADEQLLIYIPFNQ 115
           + +  +DL  FI+ +  ECLN++  H F N     C   D   LESD DEQLLI + FNQ
Sbjct: 119 IPKGYMDLMPFINKAGCECLNESDEHGFDN-----CLRKDMSFLESDCDEQLLITVAFNQ 178

Query: 116 VVKLHSLVIKGPEE-EGPRTVKLFSN-KEHMGFGNVNDYPPSDTIVFSPDNLTGKPEV-V 175
            VKL+S+  +GP+  +GP+ VK+F N    M F       P+  +  + D++     V +
Sbjct: 179 PVKLYSMKFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPL 238

Query: 176 KYVKFQNVRSLTIFIEDNQSGADTTKVQKIGLYGTTVETTDMKGLKKI 221
           +YVKFQNV S+T+F++ NQ   +TT++      GT V+ T+M   K++
Sbjct: 239 RYVKFQNVNSVTLFVQSNQGEEETTRISYFTFIGTPVQATNMNDFKRV 281

[Close]

BLAST of Sed0002619 vs. ExPASy Swiss-Prot
Match: Q9USR1 (Thioredoxin-like protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=txl1 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.2e-22
Identity = 67/181 (37.02%), Postives = 103/181 (56.91%), Query Frame = 0


Query: 50  AASATAVHRNQVDLSDFIDWSSVECLNQNFSHTFTNALNQTCRDNDSLHLESDADEQLLI 109
           A+S++A  +    L   I+   +ECLNQ   H   +A N     N S  LESD DEQL+I
Sbjct: 116 ASSSSAPVKGFASLQGCIENPQLECLNQQDDHDLKSAFN----SNPSSFLESDVDEQLMI 175

Query: 110 YIPFNQVVKLHSLVI---KGPEEEGPRTVKLFSNK-EHMGFGNVNDYPPS---DTIVFSP 169
           YIPF +VVK+HS+ I   KG     P+T+KL+ N+  ++ F +   + P+   + IV+  
Sbjct: 176 YIPFLEVVKVHSIAITPVKGETSSAPKTIKLYINQPNNLSFEDAESFTPTQVIEDIVYEQ 235

Query: 170 DNLTGKPEVV--KYVKFQNVRSLTIFIEDNQSGADTTKVQKIGLYGTTVETTDMKGLKKI 222
           D+   +P ++  ++VKFQ V SL IFI  N    +TTK+ ++ L+G  V  +    L+K+
Sbjct: 236 DD---QPTIIPLRFVKFQRVNSLVIFIYSNVGEEETTKISRLELFGEPVGDSSKGKLQKV 289

[Close]

BLAST of Sed0002619 vs. ExPASy TrEMBL
Match: A0A6J1KJE4 (PITH domain-containing protein At3g04780-like OS=Cucurbita maxima OX=3661 GN=LOC111493734 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 2.4e-90
Identity = 167/176 (94.89%), Postives = 171/176 (97.16%), Query Frame = 0


Query: 48  MAAASATAVHRNQVDLSDFIDWSSVECLNQNFSHTFTNALNQTCRDNDSLHLESDADEQL 107
           MAAASATA+HRNQVDLSDFI+WS VECLNQNFSHTFTNALNQTCRDNDSL LESDADEQL
Sbjct: 1   MAAASATAIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL 60

Query: 108 LIYIPFNQVVKLHSLVIKGPEEEGPRTVKLFSNKEHMGFGNVNDYPPSDTIVFSPDNLTG 167
           LIYIPFNQV+KLHSLVIKGPEEEGPRTVKLFSNKE+MGFGNVNDYPPSDTIV SPDNLTG
Sbjct: 61  LIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG 120

Query: 168 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIGLYGTTVETTDMKGLKKIEDH 224
           KPEVVKYVKFQNVRSLTIFIEDNQSGAD TKVQKI LYGTTVETTDMKGLKKIEDH
Sbjct: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADVTKVQKIALYGTTVETTDMKGLKKIEDH 176

[Close]

BLAST of Sed0002619 vs. ExPASy TrEMBL
Match: A0A6J1G4V6 (PITH domain-containing protein At3g04780-like OS=Cucurbita moschata OX=3662 GN=LOC111450832 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 2.4e-90
Identity = 167/176 (94.89%), Postives = 171/176 (97.16%), Query Frame = 0


Query: 48  MAAASATAVHRNQVDLSDFIDWSSVECLNQNFSHTFTNALNQTCRDNDSLHLESDADEQL 107
           MAAASATA+HRNQVDLSDFI+WS VECLNQNFSHTFTNALNQTCRDNDSL LESDADEQL
Sbjct: 1   MAAASATAIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL 60

Query: 108 LIYIPFNQVVKLHSLVIKGPEEEGPRTVKLFSNKEHMGFGNVNDYPPSDTIVFSPDNLTG 167
           LIYIPFNQV+KLHSLVIKGPEEEGPRTVKLFSNKE+MGFGNVNDYPPSDTIV SPDNLTG
Sbjct: 61  LIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG 120

Query: 168 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIGLYGTTVETTDMKGLKKIEDH 224
           KPEVVKYVKFQNVRSLTIFIEDNQSGAD TKVQKI LYGTTVETTDMKGLKKIEDH
Sbjct: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADVTKVQKIALYGTTVETTDMKGLKKIEDH 176

[Close]

BLAST of Sed0002619 vs. ExPASy TrEMBL
Match: A0A5D3D4D2 (PITH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001340 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 1.2e-89
Identity = 166/176 (94.32%), Postives = 171/176 (97.16%), Query Frame = 0


Query: 48  MAAASATAVHRNQVDLSDFIDWSSVECLNQNFSHTFTNALNQTCRDNDSLHLESDADEQL 107
           MAAASATA++RNQVDLSDFI+WS VECLNQNFSHTFTNALNQTCRDNDSL LESDADEQL
Sbjct: 1   MAAASATAINRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL 60

Query: 108 LIYIPFNQVVKLHSLVIKGPEEEGPRTVKLFSNKEHMGFGNVNDYPPSDTIVFSPDNLTG 167
           LIYIPFNQVVKLHSLVIKGPEEEGPRTVKLFSNKE+MGFGNVNDYPPSDTIV SPDNLTG
Sbjct: 61  LIYIPFNQVVKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG 120

Query: 168 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIGLYGTTVETTDMKGLKKIEDH 224
           KPEVVKYVKFQNVRSLTIFIEDNQSG DTTK+QKI LYGTTVETTDMKGLKKIEDH
Sbjct: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKIEDH 176

[Close]

BLAST of Sed0002619 vs. ExPASy TrEMBL
Match: A0A6J1FBX4 (PITH domain-containing protein At3g04780-like OS=Cucurbita moschata OX=3662 GN=LOC111444016 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 1.2e-89
Identity = 164/176 (93.18%), Postives = 172/176 (97.73%), Query Frame = 0


Query: 48  MAAASATAVHRNQVDLSDFIDWSSVECLNQNFSHTFTNALNQTCRDNDSLHLESDADEQL 107
           MAAASATA+HRNQVDLSDFI+WS +ECLNQNFSHTFTNAL+QTCRDNDSL LESDADEQ+
Sbjct: 1   MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQI 60

Query: 108 LIYIPFNQVVKLHSLVIKGPEEEGPRTVKLFSNKEHMGFGNVNDYPPSDTIVFSPDNLTG 167
           L+YIPFNQV+KLHSLVIKGPEEEGPRTVKLFSNKE+MGFGNVNDYPPSDTIV SPDNLTG
Sbjct: 61  LMYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG 120

Query: 168 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIGLYGTTVETTDMKGLKKIEDH 224
           KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKI LYGTTVETTDMKGLKKIEDH
Sbjct: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTTVETTDMKGLKKIEDH 176

[Close]

BLAST of Sed0002619 vs. ExPASy TrEMBL
Match: A0A1S3C1X8 (PITH domain-containing protein At3g04780 OS=Cucumis melo OX=3656 GN=LOC103495923 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 1.2e-89
Identity = 166/176 (94.32%), Postives = 171/176 (97.16%), Query Frame = 0


Query: 48  MAAASATAVHRNQVDLSDFIDWSSVECLNQNFSHTFTNALNQTCRDNDSLHLESDADEQL 107
           MAAASATA++RNQVDLSDFI+WS VECLNQNFSHTFTNALNQTCRDNDSL LESDADEQL
Sbjct: 1   MAAASATAINRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL 60

Query: 108 LIYIPFNQVVKLHSLVIKGPEEEGPRTVKLFSNKEHMGFGNVNDYPPSDTIVFSPDNLTG 167
           LIYIPFNQVVKLHSLVIKGPEEEGPRTVKLFSNKE+MGFGNVNDYPPSDTIV SPDNLTG
Sbjct: 61  LIYIPFNQVVKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG 120

Query: 168 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIGLYGTTVETTDMKGLKKIEDH 224
           KPEVVKYVKFQNVRSLTIFIEDNQSG DTTK+QKI LYGTTVETTDMKGLKKIEDH
Sbjct: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKIEDH 176

[Close]

BLAST of Sed0002619 vs. TAIR 10
Match: AT3G04780.1 (Protein of unknown function (DUF1000) )

HSP 1 Score: 268.1 bits (684), Expect = 6.4e-72
Identity = 130/176 (73.86%), Postives = 149/176 (84.66%), Query Frame = 0


Query: 48  MAAASATAVHRNQVDLSDFIDWSSVECLNQNFSHTFTNALNQTCRDNDSLHLESDADEQL 107
           M+A SA+ + + QVDL DFIDWS VECLNQ+ SH+  NAL Q  R+++ L+LESDADEQL
Sbjct: 1   MSAESASQIPKGQVDLLDFIDWSGVECLNQSSSHSLPNALKQGYREDEGLNLESDADEQL 60

Query: 108 LIYIPFNQVVKLHSLVIKGPEEEGPRTVKLFSNKEHMGFGNVNDYPPSDTIVFSPDNLTG 167
           LIYIPFNQV+KLHS  IKGPEEEGP+TVK FSNKEHM F NVND+PPSDT   + +NL G
Sbjct: 61  LIYIPFNQVIKLHSFAIKGPEEEGPKTVKFFSNKEHMCFSNVNDFPPSDTAELTEENLKG 120

Query: 168 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIGLYGTTVETTDMKGLKKIEDH 224
           KP V+KYVKFQNVRSLTIFIE NQSG++ TKVQKI LYG+TVETTDMKGLKKIEDH
Sbjct: 121 KPVVLKYVKFQNVRSLTIFIEANQSGSEVTKVQKIALYGSTVETTDMKGLKKIEDH 176

[Close]

BLAST of Sed0002619 vs. TAIR 10
Match: AT2G25950.1 (Protein of unknown function (DUF1000) )

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-10
Identity = 47/154 (30.52%), Postives = 81/154 (52.60%), Query Frame = 0


Query: 67  IDWSSVECLNQNFSHTFTNALN--QTCRDNDSLHLES-DADEQLLIYIPFNQVVKLHSL- 126
           ID S V  LN++ S +  +     +    +   HLES + D +LL+++PF   VK+ S+ 
Sbjct: 24  IDLSKVSALNESVSGSAKSVFKAWEQRLHSSGEHLESNEGDPELLVFVPFTSDVKIKSIS 83

Query: 127 VIKGPEEEGPRTVKLFSNKEHMGFGNVNDYPPSDTIVFSPDNLTGKPEV-VKYVKFQNVR 186
           ++ GPE   P  +++F N+E + F +            + +NL G  E   +Y KFQ+V 
Sbjct: 84  IVGGPEGTSPSKLRVFINREGIDFSDAESMQAVQEWELA-ENLQGVLEYQTRYSKFQSVG 143

Query: 187 SLTIFIEDNQSGADTTKVQKIGLYGTTVETTDMK 216
           ++T+   ++  G DTT+++ IG  G   E T +K
Sbjct: 144 NITLHFPES-FGGDTTQIRYIGFKG---EATQLK 172

The following BLAST results are available for this feature:

BLAST of Sed0002619 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891254.1	4.9e-90	94.32	PITH domain-containing protein At3g04780 [Benincasa hispida]	[more]
XP_022946891.1	4.9e-90	94.89	PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_022946892...	[more]
XP_008455826.1	2.4e-89	94.32	PREDICTED: PITH domain-containing protein At3g04780 [Cucumis melo] >KAA0063617.1...	[more]
XP_022937687.1	2.4e-89	93.18	PITH domain-containing protein At3g04780-like [Cucurbita moschata] >XP_023521129...	[more]
XP_022965977.1	2.7e-88	92.61	PITH domain-containing protein At3g04780-like [Cucurbita maxima]	[more]

BLAST of Sed0002619 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SQZ9	9.0e-71	73.86	PITH domain-containing protein At3g04780 OS=Arabidopsis thaliana OX=3702 GN=At3g...	[more]
O43396	4.4e-25	38.24	Thioredoxin-like protein 1 OS=Homo sapiens OX=9606 GN=TXNL1 PE=1 SV=3	[more]
Q920J4	2.2e-24	37.65	Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3	[more]
Q8CDN6	3.7e-24	37.50	Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=3	[more]
Q9USR1	1.2e-22	37.02	Thioredoxin-like protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843...	[more]

BLAST of Sed0002619 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KJE4	2.4e-90	94.89	PITH domain-containing protein At3g04780-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1G4V6	2.4e-90	94.89	PITH domain-containing protein At3g04780-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A5D3D4D2	1.2e-89	94.32	PITH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A6J1FBX4	1.2e-89	93.18	PITH domain-containing protein At3g04780-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A1S3C1X8	1.2e-89	94.32	PITH domain-containing protein At3g04780 OS=Cucumis melo OX=3656 GN=LOC103495923...	[more]

BLAST of Sed0002619 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04780.1	6.4e-72	73.86	Protein of unknown function (DUF1000)	[more]
AT2G25950.1	1.1e-10	30.52	Protein of unknown function (DUF1000)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010400	PITH domain	PFAM	PF06201	PITH	coord: 63..207 e-value: 2.6E-39 score: 134.8
IPR010400	PITH domain	PROSITE	PS51532	PITH	coord: 52..223 score: 53.802639
IPR037047	PITH domain superfamily	GENE3D	2.60.120.470	PITH domain	coord: 52..223 e-value: 4.0E-55 score: 188.1
IPR045099	PITH domain-containing protein 1-like	PANTHER	PTHR12175	AD039 HT014 THIOREDOXIN FAMILY TRP26	coord: 50..223
None	No IPR available	PANTHER	PTHR12175:SF5	THIOREDOXIN LIKE 1	coord: 50..223
IPR008979	Galactose-binding-like domain superfamily	SUPERFAMILY	49785	Galactose-binding domain-like	coord: 54..207

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002619.1	Sed0002619.1	mRNA