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Sed0002611 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGCAACGTCCATGCATACAAATCGACATGTCGAACTCGAAAGCTCAACGAATGATGAAGATGGTATGGTTAGGCATTGTTATAAGTGTCGTAATTTTGAGGTTCCCTGTTTCGGAAGGATGCTGGGCCGACAACAGCAACATGAACAGCTAATTTCATCTCAAATTCCACAAAGTTTCTCACTATTCATTTTTTCCAGGAAACCCTAAATGGCCGACCCCTTCAAAATACAATTTAACCTTCTCATTCCCTAACGGAATCCCCGCCATAGCTCAAGCTTTCAACAAGTGGGCTTCCCAAACCCCGTTCACGTTTATCCAAGTCCTAATTACTATTTAAATAAGCTAAAATATACTTACATTTTTAAAGTTGATGGTACTCGAAGTTCATATTTTGTTTCTTACTATTCTCAAATAATATGAAAATATGGATTACCGGTAAATAATGAAACTACCATGTTACTGACCATTTGATACTGATGAGATACTGATGACGATATTTTTAATTTATTACTTTTTTATTAAAAAAAACAAAATTTATGTTAAGACCACTTTTAAATATTTTTAGTGAGTTTAAGGAGCAAAAGGACTCAAATCTCAACATTTATGAATTGAAATTAAAGTTTAAAATTTTAAGCCCTTCCTTGATAAGCATTTTGTTTTTAAAATTTAAGCTTATTTTTTACCATGTGTTTCATCTTTTGTACAATGGGTTCATCTCTCTTCTTAAGAAAGTAGATGAATGTTAATCAAATTTAAAAAACAAAAATAAGTTTTTGAAAGCTATTTTTTTGTTTCTAAATTTTGGTTTGGTTTCCAGCATATTTAAGATAGTTGTTGTAGGCTTAAATTTAAAAAATCAAATGGTTATTTTTTTTTTAAAACAAAAATCAAATGGTTATTAAATGGGGAATTAATGTTTGAAATTAGACTTGAAATTTTAAGAACCAAAATGGAATACCTTTCAAAAGGGTCTAAAATAATATTAGAACCATTTAAATTTTATGAGATTGTCTCTAGATTTTGTTACATATTTTTTAGGATTAGTAAAACGATTCTCAAGAAATTGATCTTGGATTAGAAGATTTATGTCTTTTTTCAAAAAAAAAAAAAAAAAAATTATGGCAGGTCTCCAACAATTCCCCTTCGGACCTCACAATAAGCTTTCAAAGAGGGTCCCATGGGGATGGGGCTCCGTTTGATGGGCCAGGGGGAATCCTAGCCCATGCCTTTGCACCGCAGGACGGCCGGCTTCACTTCGACGCCGATGAAAAGTATTCGATCGTCGCCCTTTCGGGTCATTTTGACCTCGAAAGTGTGGGGATTCATGAGATTGGACACCTTCTCGGGCTTGGTCACAGCAATGTTACTCAGGCTATTATGTACCCCTTCATTAGTTCTGGAACTGTCAAGACCAACCTTGATGCTGATGATGTTAACGGAATGAAGGCTTTGTATAATTTCTGA ATGGAGCAACGTCCATGCATACAAATCGACATGTCGAACTCGAAAGCTCAACGAATGATGAAGATGGTCTCCAACAATTCCCCTTCGGACCTCACAATAAGCTTTCAAAGAGGGTCCCATGGGGATGGGGCTCCGTTTGATGGGCCAGGGGGAATCCTAGCCCATGCCTTTGCACCGCAGGACGGCCGGCTTCACTTCGACGCCGATGAAAAGTATTCGATCGTCGCCCTTTCGGGTCATTTTGACCTCGAAAGTGTGGGGATTCATGAGATTGGACACCTTCTCGGGCTTGGTCACAGCAATGTTACTCAGGCTATTATGTACCCCTTCATTAGTTCTGGAACTGTCAAGACCAACCTTGATGCTGATGATGTTAACGGAATGAAGGCTTTGTATAATTTCTGA ATGGAGCAACGTCCATGCATACAAATCGACATGTCGAACTCGAAAGCTCAACGAATGATGAAGATGGTCTCCAACAATTCCCCTTCGGACCTCACAATAAGCTTTCAAAGAGGGTCCCATGGGGATGGGGCTCCGTTTGATGGGCCAGGGGGAATCCTAGCCCATGCCTTTGCACCGCAGGACGGCCGGCTTCACTTCGACGCCGATGAAAAGTATTCGATCGTCGCCCTTTCGGGTCATTTTGACCTCGAAAGTGTGGGGATTCATGAGATTGGACACCTTCTCGGGCTTGGTCACAGCAATGTTACTCAGGCTATTATGTACCCCTTCATTAGTTCTGGAACTGTCAAGACCAACCTTGATGCTGATGATGTTAACGGAATGAAGGCTTTGTATAATTTCTGA MEQRPCIQIDMSNSKAQRMMKMVSNNSPSDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKYSIVALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSGTVKTNLDADDVNGMKALYNF Homology
BLAST of Sed0002611 vs. NCBI nr
Match: XP_022959874.1 (metalloendoproteinase 1-like [Cucurbita moschata]) HSP 1 Score: 170.6 bits (431), Expect = 9.0e-39 Identity = 80/112 (71.43%), Postives = 92/112 (82.14%), Query Frame = 0
BLAST of Sed0002611 vs. NCBI nr
Match: KAG6602460.1 (Metalloendoproteinase 2-MMP, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 170.6 bits (431), Expect = 9.0e-39 Identity = 80/112 (71.43%), Postives = 92/112 (82.14%), Query Frame = 0
BLAST of Sed0002611 vs. NCBI nr
Match: XP_023544550.1 (metalloendoproteinase 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 166.0 bits (419), Expect = 2.2e-37 Identity = 78/112 (69.64%), Postives = 90/112 (80.36%), Query Frame = 0
BLAST of Sed0002611 vs. NCBI nr
Match: XP_022134258.1 (metalloendoproteinase 3-MMP-like [Momordica charantia]) HSP 1 Score: 164.9 bits (416), Expect = 4.9e-37 Identity = 74/120 (61.67%), Postives = 95/120 (79.17%), Query Frame = 0
BLAST of Sed0002611 vs. NCBI nr
Match: XP_017224741.1 (PREDICTED: metalloendoproteinase 1-like [Daucus carota subsp. sativus] >KZM82817.1 hypothetical protein DCAR_030386 [Daucus carota subsp. sativus]) HSP 1 Score: 163.3 bits (412), Expect = 1.4e-36 Identity = 77/109 (70.64%), Postives = 86/109 (78.90%), Query Frame = 0
BLAST of Sed0002611 vs. ExPASy Swiss-Prot
Match: O04529 (Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana OX=3702 GN=2MMP PE=1 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 9.7e-28 Identity = 61/113 (53.98%), Postives = 78/113 (69.03%), Query Frame = 0
BLAST of Sed0002611 vs. ExPASy Swiss-Prot
Match: P29136 (Metalloendoproteinase 1 OS=Glycine max OX=3847 PE=1 SV=2) HSP 1 Score: 121.7 bits (304), Expect = 6.3e-27 Identity = 61/110 (55.45%), Postives = 76/110 (69.09%), Query Frame = 0
BLAST of Sed0002611 vs. ExPASy Swiss-Prot
Match: Q5XF51 (Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana OX=3702 GN=3MMP PE=1 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 9.1e-26 Identity = 59/118 (50.00%), Postives = 75/118 (63.56%), Query Frame = 0
BLAST of Sed0002611 vs. ExPASy Swiss-Prot
Match: Q8GWW6 (Metalloendoproteinase 4-MMP OS=Arabidopsis thaliana OX=3702 GN=4MMP PE=1 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 1.7e-24 Identity = 58/112 (51.79%), Postives = 75/112 (66.96%), Query Frame = 0
BLAST of Sed0002611 vs. ExPASy Swiss-Prot
Match: O23507 (Metalloendoproteinase 1-MMP OS=Arabidopsis thaliana OX=3702 GN=1MMP PE=1 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 5.0e-24 Identity = 61/115 (53.04%), Postives = 73/115 (63.48%), Query Frame = 0
BLAST of Sed0002611 vs. ExPASy TrEMBL
Match: A0A6J1H9C5 (metalloendoproteinase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460805 PE=4 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 4.4e-39 Identity = 80/112 (71.43%), Postives = 92/112 (82.14%), Query Frame = 0
BLAST of Sed0002611 vs. ExPASy TrEMBL
Match: A0A6J1C1I2 (metalloendoproteinase 3-MMP-like OS=Momordica charantia OX=3673 GN=LOC111006559 PE=4 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 2.4e-37 Identity = 74/120 (61.67%), Postives = 95/120 (79.17%), Query Frame = 0
BLAST of Sed0002611 vs. ExPASy TrEMBL
Match: A0A175YHG4 (ZnMc domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_030386 PE=3 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 7.0e-37 Identity = 77/109 (70.64%), Postives = 86/109 (78.90%), Query Frame = 0
BLAST of Sed0002611 vs. ExPASy TrEMBL
Match: A0A6J1JKI7 (metalloendoproteinase 2-MMP-like OS=Cucurbita maxima OX=3661 GN=LOC111487737 PE=4 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 9.1e-37 Identity = 77/112 (68.75%), Postives = 91/112 (81.25%), Query Frame = 0
BLAST of Sed0002611 vs. ExPASy TrEMBL
Match: A0A175YGL0 (ZnMc domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_030385 PE=3 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 5.9e-36 Identity = 74/105 (70.48%), Postives = 85/105 (80.95%), Query Frame = 0
BLAST of Sed0002611 vs. TAIR 10
Match: AT1G70170.1 (matrix metalloproteinase ) HSP 1 Score: 124.4 bits (311), Expect = 6.9e-29 Identity = 61/113 (53.98%), Postives = 78/113 (69.03%), Query Frame = 0
BLAST of Sed0002611 vs. TAIR 10
Match: AT1G24140.1 (Matrixin family protein ) HSP 1 Score: 117.9 bits (294), Expect = 6.4e-27 Identity = 59/118 (50.00%), Postives = 75/118 (63.56%), Query Frame = 0
BLAST of Sed0002611 vs. TAIR 10
Match: AT2G45040.1 (Matrixin family protein ) HSP 1 Score: 113.6 bits (283), Expect = 1.2e-25 Identity = 58/112 (51.79%), Postives = 75/112 (66.96%), Query Frame = 0
BLAST of Sed0002611 vs. TAIR 10
Match: AT4G16640.1 (Matrixin family protein ) HSP 1 Score: 112.1 bits (279), Expect = 3.5e-25 Identity = 61/115 (53.04%), Postives = 73/115 (63.48%), Query Frame = 0
BLAST of Sed0002611 vs. TAIR 10
Match: AT1G59970.1 (Matrixin family protein ) HSP 1 Score: 110.9 bits (276), Expect = 7.9e-25 Identity = 57/113 (50.44%), Postives = 70/113 (61.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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