Sed0002569 (gene) Chayote v1

Overview


Name	Sed0002569
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Ribosomal protein L19
Location	LG07: 2332804 .. 2335581 (+)
RNA-Seq Expression	Sed0002569
Synteny	Sed0002569

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTTTGTTGGTGAAGGCCGACAATAAAAGGGCAGTTCTAAAACCCTAGACGGCCAGTTTCTCCTTATCTTCTCTGCAACGAAAAAATGGTTTCCCTAAAACTACAGAAGCGGCTCGCGGCCAGCGTCCTCAAATGCGGGAGAGGCAAGGTCTGGCTCGATCCCAATGAGGGCAACGAAATCTCCATGGCCAACTCTCGTAAGCTTTCTCTTTCGCCGTCTTTTCGTTTAGATTCAAATCGTTTCCATTTGTCGATCGTTTCTTGAATCTCCACGTTGTTGCTTGTAGTTCCCTGATTTTGATTGCACAATCTCAAGATTGTTCTGTGAAATGTGTTTTGGGATCTGAATTTTTCCCCTACGTCATGGCCGCGATCGTCGTTTCTTAATGATATTACTGTTTCCATCGTCTCTACTAATTGAAACTCGAGTTTATCTCAACTCCTGGTACTCTAATGCGTTAAATCATTTGAATCTGATTTTTTTTTATAGGAAACACAAAACTTTCATTGATAAAACGAAGAGTTACAGAAAAATTAGGAAAAACCAATGATAAATTACAAAAACCCATGCCAATGATGCAACAAAGTGTTAAAACTATTGCTAGGCGATGATATCTTCGTGTTGTATTGAAAGTTTTTGTTATTTTTTAGCACACTTGTATTCACTGGTTAGTGAAGTTATAAAAGTTGTACATTGAAATATTTTTATCTTCTATTTTGATTGGAGTACCGTTGGGAAGATCAAAGAAAACTCATGGGCTAGCCACTGCTTGTTCTTTTTTTTGAAACAAGGGTAACCATGCCCGTCCCTAGGCTAGGCACCGGGAGACATCGAAGGGGTAATGCATAGCTGAGTCTCGAACTTAGGACCTTGAGGGGAGCATACCCTCAAAGCCCAAGTCTTCGACCACTGTGCCACTCCTTGGAGACAGCCATCTTTTTCTTTGAATTGCTGTTAGTTTTTCAGTCTTTTGTTGGTGTAGGAATGACCTTGGTATTTATTATCTCTTCTTTCAGTTATCAATGATATTAATTCTTAGTAAAAATTAGAAAGTAAGAAACAATTTTTTTTTTCTTTTTTTGGATCGAGTCAGTCCAAACAGCTCGGCATTGACTGACACTCGACAATAGACCCGAGTGGGTTCTTCGCACTGGTTCAGTTTAGGGCTCGTTTTCTTGTAGTAGAGGGATCTGACATTGCTTTTTTAAGTTCTCCAACCTTATTCTTCTTGTATCAGGGTTCAATGCATCTCTCTCCCTCCTTTGTCACTTTTTCATATTATCAATGAAATGTTTTTATTTCCTATAAATAAAGTTATAGAATAGTTCCCCTTAGATTCTTCACTGTTGGGAAATGTAATTCTTTCATGGAACTTTTCAGTTTTTTCCTTCGTTACTATTCCAAATGTTACAAGCCTTAATTTTTATTTTTAGGGAGCAATGTATATCATTCATATGTATTTAGAAATATAGCAAACTAACTTTTATTCAGGAGAATCTATTTGAAACTTTGATTTACGGTTTGATCTTTCATAGTGATATAAATGGTGCTTTAGAACTGTTTGTGGTTTTGTTGTTAATTGATGTCTGGATCGTTGAGTACAGGCCAAAATATAAGGAAGTTGGTGAAGGATGGTTTCATTATCAGGAAGCCAACCAAGATCCACTCCCGTTCTAGAGCACGTCGCATGAAGGAGGCCAAGAGAAAGGGTCGCCACTCTGGATATGGTACTTTTCTCTGATCTCTTGATTTATTTTTTACGGATTCTGTTGTGGAGAAGCTTTTATGGGATCTTATTTAGTACTCATGCTCATCTCAGATTATTTCTCTTTTGTGTCATATACTTAAAAGAGGCACGATTCTTTGTTTTTGTACTTAAATTTTCATTTTTAACCTTATTCAGGTAAGCGTAAGGGTACCAGGGAGGCAAGGTTGCCTACCAAGATCCTTTGGATGAGGAGAATGCGTGTTCTCAGGAGATTGCTCCGCAAATATCGAGAATCTAAGAAGATCGACAAGCATATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTCTTCAAGAACAAGCGTGTGCTGATGGAGAGCATCCACAAGTCAAAAGCCGAGAAGGCGAGAGAAAAGACATTGTCAGATCAATTTGAGGCTAAGAGGGCTAAGAACAAAGCCAGCAGGGAGAGAAAATTCGCTAGGAGGGAGGAACGATTGGCACAGGTTTCTTTCCCATCTCGATCTTGATTATTTCCGACCTAATTGCATTCATACCTCCAATGCCCGTTTTAATTCTTATTCACTCTATGTTGTAGGGACCTGGAGAGAAACAGCCACCTGCGGTATCGGCAGCCCAACCTGCTGCTCAATCTACTCAGTAAGTATCAATCATCAAAATGTTTGTAAATCTTTTCTTCATTCTGCAATACTAAGTACCTTTCTATGTCGTGCAGGCCATCGAAGAAATCGAAGAAGTGAGGTTTTTATAGGAGTGTTGTCGGAAGGTTTACTTCTGATAGTTCTTGTGTCTGTTATTCTAGAGTAGTTTTGAGGAGGCTTTTGCAGCCTTTTGTTCACTTTTGGATCTTGTTTCTTCATATCCCAGACCAAGGATTTCGAGCCTGGTAGTTTTGTTAGTTTTTGTTAATGTTTTTTGTCAACGGTGTTTGCTAAGTGGAATTTATTTGAGATTTTTATGCATATTGATCGATTTAGGGTGGATATTGTTTTGAATTTACAGTATAGTTAGTCTATATTATAAAAATTATTATTAAGATTTAA

mRNA sequence

GTTTTTTGTTGGTGAAGGCCGACAATAAAAGGGCAGTTCTAAAACCCTAGACGGCCAGTTTCTCCTTATCTTCTCTGCAACGAAAAAATGGTTTCCCTAAAACTACAGAAGCGGCTCGCGGCCAGCGTCCTCAAATGCGGGAGAGGCAAGGTCTGGCTCGATCCCAATGAGGGCAACGAAATCTCCATGGCCAACTCTCGCCAAAATATAAGGAAGTTGGTGAAGGATGGTTTCATTATCAGGAAGCCAACCAAGATCCACTCCCGTTCTAGAGCACGTCGCATGAAGGAGGCCAAGAGAAAGGGTCGCCACTCTGGATATGGTAAGCGTAAGGGTACCAGGGAGGCAAGGTTGCCTACCAAGATCCTTTGGATGAGGAGAATGCGTGTTCTCAGGAGATTGCTCCGCAAATATCGAGAATCTAAGAAGATCGACAAGCATATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTCTTCAAGAACAAGCGTGTGCTGATGGAGAGCATCCACAAGTCAAAAGCCGAGAAGGCGAGAGAAAAGACATTGTCAGATCAATTTGAGGCTAAGAGGGCTAAGAACAAAGCCAGCAGGGAGAGAAAATTCGCTAGGAGGGAGGAACGATTGGCACAGGGACCTGGAGAGAAACAGCCACCTGCGGTATCGGCAGCCCAACCTGCTGCTCAATCTACTCAGCCATCGAAGAAATCGAAGAAGTGAGGTTTTTATAGGAGTGTTGTCGGAAGGTTTACTTCTGATAGTTCTTGTGTCTGTTATTCTAGAGTAGTTTTGAGGAGGCTTTTGCAGCCTTTTGTTCACTTTTGGATCTTGTTTCTTCATATCCCAGACCAAGGATTTCGAGCCTGGTAGTTTTGTTAGTTTTTGTTAATGTTTTTTGTCAACGGTGTTTGCTAAGTGGAATTTATTTGAGATTTTTATGCATATTGATCGATTTAGGGTGGATATTGTTTTGAATTTACAGTATAGTTAGTCTATATTATAAAAATTATTATTAAGATTTAA

Coding sequence (CDS)

ATGGTTTCCCTAAAACTACAGAAGCGGCTCGCGGCCAGCGTCCTCAAATGCGGGAGAGGCAAGGTCTGGCTCGATCCCAATGAGGGCAACGAAATCTCCATGGCCAACTCTCGCCAAAATATAAGGAAGTTGGTGAAGGATGGTTTCATTATCAGGAAGCCAACCAAGATCCACTCCCGTTCTAGAGCACGTCGCATGAAGGAGGCCAAGAGAAAGGGTCGCCACTCTGGATATGGTAAGCGTAAGGGTACCAGGGAGGCAAGGTTGCCTACCAAGATCCTTTGGATGAGGAGAATGCGTGTTCTCAGGAGATTGCTCCGCAAATATCGAGAATCTAAGAAGATCGACAAGCATATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTCTTCAAGAACAAGCGTGTGCTGATGGAGAGCATCCACAAGTCAAAAGCCGAGAAGGCGAGAGAAAAGACATTGTCAGATCAATTTGAGGCTAAGAGGGCTAAGAACAAAGCCAGCAGGGAGAGAAAATTCGCTAGGAGGGAGGAACGATTGGCACAGGGACCTGGAGAGAAACAGCCACCTGCGGTATCGGCAGCCCAACCTGCTGCTCAATCTACTCAGCCATCGAAGAAATCGAAGAAGTGA

Protein sequence

MVSLKLQKRLAASVLKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREERLAQGPGEKQPPAVSAAQPAAQSTQPSKKSKK

Homology

[Close]

BLAST of Sed0002569 vs. NCBI nr
Match: XP_023514714.1 (60S ribosomal protein L19-1-like [Cucurbita pepo subsp. pepo] >KAG6593210.1 60S ribosomal protein L19-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030210.1 60S ribosomal protein L19-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 380.2 bits (975), Expect = 1.2e-101
Identity = 207/211 (98.10%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCG+GKVWLDPNE NEISMANSRQNIRKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKQPPAVSAAQPAAQSTQPSKKSKK 212
           LAQGPGEKQPPA SAAQPAAQSTQPSKKSKK
Sbjct: 181 LAQGPGEKQPPATSAAQPAAQSTQPSKKSKK 211

[Close]

BLAST of Sed0002569 vs. NCBI nr
Match: XP_023004655.1 (60S ribosomal protein L19-1-like [Cucurbita maxima])

HSP 1 Score: 377.1 bits (967), Expect = 1.0e-100
Identity = 206/211 (97.63%), Postives = 208/211 (98.58%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCG+GKVWLDPNE NEISMANSRQNIRKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKQPPAVSAAQPAAQSTQPSKKSKK 212
           LAQGPGEKQPPA SAAQPAAQSTQ SKKSKK
Sbjct: 181 LAQGPGEKQPPATSAAQPAAQSTQQSKKSKK 211

[Close]

BLAST of Sed0002569 vs. NCBI nr
Match: XP_022959808.1 (60S ribosomal protein L19-1-like [Cucurbita moschata])

HSP 1 Score: 374.8 bits (961), Expect = 4.9e-100
Identity = 205/211 (97.16%), Postives = 207/211 (98.10%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCG+GKVWLDPNE NEISMANSRQNIRKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKQPPAVSAAQPAAQSTQPSKKSKK 212
           LAQGPGEKQPP  SAAQPAAQSTQ SKKSKK
Sbjct: 181 LAQGPGEKQPPVTSAAQPAAQSTQLSKKSKK 211

[Close]

BLAST of Sed0002569 vs. NCBI nr
Match: XP_004136019.1 (60S ribosomal protein L19-1 [Cucumis sativus] >KAE8646346.1 hypothetical protein Csa_015693 [Cucumis sativus])

HSP 1 Score: 370.9 bits (951), Expect = 7.1e-99
Identity = 206/213 (96.71%), Postives = 207/213 (97.18%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNE NEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKQPPAVSAAQPAA--QSTQPSKKSKK 212
           LAQGPGEKQPP  SAAQPAA  QSTQ SKKSKK
Sbjct: 181 LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK 213

[Close]

BLAST of Sed0002569 vs. NCBI nr
Match: XP_038896810.1 (60S ribosomal protein L19-1-like [Benincasa hispida])

HSP 1 Score: 368.6 bits (945), Expect = 3.5e-98
Identity = 205/213 (96.24%), Postives = 206/213 (96.71%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNE NEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKQPPAVSAAQPAA--QSTQPSKKSKK 212
           LAQGPGEKQPP  SAAQPAA  QSTQ SKKSKK
Sbjct: 181 LAQGPGEKQPPVTSAAQPAAASQSTQASKKSKK 213

[Close]

BLAST of Sed0002569 vs. ExPASy Swiss-Prot
Match: Q9SRX2 (60S ribosomal protein L19-1 OS=Arabidopsis thaliana OX=3702 GN=RPL19A PE=2 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 1.4e-89
Identity = 183/214 (85.51%), Postives = 195/214 (91.12%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASV+KCG+GKVWLDPNE ++ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVMKCGKGKVWLDPNESSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR+MK AK KGRHSGYGKRKGTREARLPTK+LWMRRMRVLRRLL+KYRE+KKIDKHMY
Sbjct: 61  SRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYM+VKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKQPPAVS---AAQPAAQSTQPSKKSKK 212
           LA+GPG    P  +   AA PA  +  P KKSKK
Sbjct: 181 LAKGPGGDVAPVAAPAPAATPAPTAAVPKKKSKK 214

[Close]

BLAST of Sed0002569 vs. ExPASy Swiss-Prot
Match: P49693 (60S ribosomal protein L19-3 OS=Arabidopsis thaliana OX=3702 GN=RPL19C PE=2 SV=3)

HSP 1 Score: 328.6 bits (841), Expect = 5.3e-89
Identity = 182/211 (86.26%), Postives = 196/211 (92.89%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLA+SVLKCG+ KVWLDPNEG++ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR++  AKRKGRHSGYGKRKGTREARLPTK+LWMRRMRVLRRLL+KYRE+KKID+HMY
Sbjct: 61  SRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKQPPAVSAAQPAAQSTQPSKKSKK 212
           LA+GPG   P   +AA PA  +  P+KKSKK
Sbjct: 181 LAKGPGGDIP---AAAPPAQTAEVPAKKSKK 208

[Close]

BLAST of Sed0002569 vs. ExPASy Swiss-Prot
Match: Q9LUQ6 (60S ribosomal protein L19-2 OS=Arabidopsis thaliana OX=3702 GN=RPL19B PE=2 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 5.0e-87
Identity = 181/213 (84.98%), Postives = 189/213 (88.73%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLK+QKRLAASV+KCG+GKVWLDPNE  +ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR + EAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRR L KYRESKKID+HMY
Sbjct: 61  SRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHK KAEKAREKTL+DQFEAKR KNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIKNKASRERKFARREER 180

Query: 181 LAQGP--GEKQPPAVSAAQPAAQSTQPSKKSKK 212
           LAQGP  GE   PA +  QP        KKSKK
Sbjct: 181 LAQGPGGGETTTPAGAPQQPEV----TKKKSKK 209

[Close]

BLAST of Sed0002569 vs. ExPASy Swiss-Prot
Match: P36241 (60S ribosomal protein L19 OS=Drosophila melanogaster OX=7227 GN=RpL19 PE=1 SV=2)

HSP 1 Score: 240.7 bits (613), Expect = 1.5e-62
Identity = 129/182 (70.88%), Postives = 152/182 (83.52%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           M SLKLQKRLAASVL+CG+ KVWLDPNE NEI+  NSRQNIRKL+KDG II+KP  +HSR
Sbjct: 1   MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
            R R+  EA+RKGRH G+GKRKGT  AR+PTK+LWM+R RVLRRLL+KYR+SKKID+H+Y
Sbjct: 61  YRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HD+YMK KGNVFKNKRVLME IHK KAEK R K L+DQ EA+R K + +R+    RREER
Sbjct: 121 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARK----RREER 178

Query: 181 LA 183
           +A
Sbjct: 181 IA 178

[Close]

BLAST of Sed0002569 vs. ExPASy Swiss-Prot
Match: Q3T0W9 (60S ribosomal protein L19 OS=Bos taurus OX=9913 GN=RPL19 PE=2 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.6e-61
Identity = 126/181 (69.61%), Postives = 151/181 (83.43%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           M  L+LQKRLA+SVL+CG+ KVWLDPNE NEI+ ANSRQ IRKL+KDG IIRKP  +HSR
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           +R R+   A+RKGRH G GKRKGT  AR+P K+ WMRRMR+LRRLLR+YRESKKID+HMY
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           H +Y+KVKGNVFKNKR+LME IHK KA+KAR+K L+DQ EA+R+K K +R+    RREER
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARK----RREER 177

Query: 181 L 182
           L
Sbjct: 181 L 177

[Close]

BLAST of Sed0002569 vs. ExPASy TrEMBL
Match: A0A6J1KV74 (Ribosomal protein L19 OS=Cucurbita maxima OX=3661 GN=LOC111497884 PE=3 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 4.8e-101
Identity = 206/211 (97.63%), Postives = 208/211 (98.58%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCG+GKVWLDPNE NEISMANSRQNIRKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKQPPAVSAAQPAAQSTQPSKKSKK 212
           LAQGPGEKQPPA SAAQPAAQSTQ SKKSKK
Sbjct: 181 LAQGPGEKQPPATSAAQPAAQSTQQSKKSKK 211

[Close]

BLAST of Sed0002569 vs. ExPASy TrEMBL
Match: A0A6J1H702 (Ribosomal protein L19 OS=Cucurbita moschata OX=3662 GN=LOC111460761 PE=3 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 2.4e-100
Identity = 205/211 (97.16%), Postives = 207/211 (98.10%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCG+GKVWLDPNE NEISMANSRQNIRKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKQPPAVSAAQPAAQSTQPSKKSKK 212
           LAQGPGEKQPP  SAAQPAAQSTQ SKKSKK
Sbjct: 181 LAQGPGEKQPPVTSAAQPAAQSTQLSKKSKK 211

[Close]

BLAST of Sed0002569 vs. ExPASy TrEMBL
Match: A0A5A7VS85 (Ribosomal protein L19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00750 PE=3 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.2e-98
Identity = 204/213 (95.77%), Postives = 206/213 (96.71%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNE NEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTK+LWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKVLWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKQPPAVSAAQPAA--QSTQPSKKSKK 212
           LAQGPGEKQPP  SAAQPAA  QSTQ SKKSKK
Sbjct: 181 LAQGPGEKQPPVTSAAQPAAVSQSTQASKKSKK 213

[Close]

BLAST of Sed0002569 vs. ExPASy TrEMBL
Match: A0A1S3BSJ2 (Ribosomal protein L19 OS=Cucumis melo OX=3656 GN=LOC103492800 PE=3 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.2e-98
Identity = 204/213 (95.77%), Postives = 206/213 (96.71%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNE NEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTK+LWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKVLWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKQPPAVSAAQPAA--QSTQPSKKSKK 212
           LAQGPGEKQPP  SAAQPAA  QSTQ SKKSKK
Sbjct: 181 LAQGPGEKQPPVTSAAQPAAVSQSTQASKKSKK 213

[Close]

BLAST of Sed0002569 vs. ExPASy TrEMBL
Match: A0A6J1DJQ5 (Ribosomal protein L19 OS=Momordica charantia OX=3673 GN=LOC111021109 PE=3 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 1.9e-97
Identity = 205/213 (96.24%), Postives = 205/213 (96.24%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCGRGKVWLDPNE NEISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNECNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKQPPAVSAAQPAA--QSTQPSKKSKK 212
           LAQGPGEKQ  A SAAQPAA  QSTQ SKKSKK
Sbjct: 181 LAQGPGEKQSSAASAAQPAAGSQSTQASKKSKK 213

[Close]

BLAST of Sed0002569 vs. TAIR 10
Match: AT1G02780.1 (Ribosomal protein L19e family protein )

HSP 1 Score: 330.5 bits (846), Expect = 1.0e-90
Identity = 183/214 (85.51%), Postives = 195/214 (91.12%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLAASV+KCG+GKVWLDPNE ++ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVMKCGKGKVWLDPNESSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR+MK AK KGRHSGYGKRKGTREARLPTK+LWMRRMRVLRRLL+KYRE+KKIDKHMY
Sbjct: 61  SRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYM+VKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKQPPAVS---AAQPAAQSTQPSKKSKK 212
           LA+GPG    P  +   AA PA  +  P KKSKK
Sbjct: 181 LAKGPGGDVAPVAAPAPAATPAPTAAVPKKKSKK 214

[Close]

BLAST of Sed0002569 vs. TAIR 10
Match: AT4G02230.1 (Ribosomal protein L19e family protein )

HSP 1 Score: 328.6 bits (841), Expect = 3.8e-90
Identity = 182/211 (86.26%), Postives = 196/211 (92.89%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLKLQKRLA+SVLKCG+ KVWLDPNEG++ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR++  AKRKGRHSGYGKRKGTREARLPTK+LWMRRMRVLRRLL+KYRE+KKID+HMY
Sbjct: 61  SRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKQPPAVSAAQPAAQSTQPSKKSKK 212
           LA+GPG   P   +AA PA  +  P+KKSKK
Sbjct: 181 LAKGPGGDIP---AAAPPAQTAEVPAKKSKK 208

[Close]

BLAST of Sed0002569 vs. TAIR 10
Match: AT3G16780.1 (Ribosomal protein L19e family protein )

HSP 1 Score: 322.0 bits (824), Expect = 3.5e-88
Identity = 181/213 (84.98%), Postives = 189/213 (88.73%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEGNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60
           MVSLK+QKRLAASV+KCG+GKVWLDPNE  +ISMANSRQNIRKLVKDGFIIRKPTKIHSR
Sbjct: 1   MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR + EAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRR L KYRESKKID+HMY
Sbjct: 61  SRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHK KAEKAREKTL+DQFEAKR KNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIKNKASRERKFARREER 180

Query: 181 LAQGP--GEKQPPAVSAAQPAAQSTQPSKKSKK 212
           LAQGP  GE   PA +  QP        KKSKK
Sbjct: 181 LAQGPGGGETTTPAGAPQQPEV----TKKKSKK 209

[Close]

BLAST of Sed0002569 vs. TAIR 10
Match: AT4G16030.1 (Ribosomal protein L19e family protein )

HSP 1 Score: 75.1 bits (183), Expect = 7.5e-14
Identity = 66/137 (48.18%), Postives = 79/137 (57.66%), Query Frame = 0


Query: 58  HSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDK 117
           HSRSRAR      RK RH+GYG  K T EA         RR+++L+RLL+K+  +KKIDK
Sbjct: 7   HSRSRAR------RKCRHTGYG--KDTMEALRRIMKRLTRRLKMLKRLLKKFCWNKKIDK 66

Query: 118 HM-YHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFAR 177
            + YHDM+MKVKG V+KNK VLMES+HKS                       SRERKF+ 
Sbjct: 67  LVYYHDMFMKVKGKVYKNKCVLMESMHKS-----------------------SRERKFSG 112

Query: 178 REERLAQGP-GEKQPPA 193
            E RLA  P GEK   A
Sbjct: 127 SEMRLALEPEGEKTASA 112

The following BLAST results are available for this feature:

BLAST of Sed0002569 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023514714.1	1.2e-101	98.10	60S ribosomal protein L19-1-like [Cucurbita pepo subsp. pepo] >KAG6593210.1 60S ...	[more]
XP_023004655.1	1.0e-100	97.63	60S ribosomal protein L19-1-like [Cucurbita maxima]	[more]
XP_022959808.1	4.9e-100	97.16	60S ribosomal protein L19-1-like [Cucurbita moschata]	[more]
XP_004136019.1	7.1e-99	96.71	60S ribosomal protein L19-1 [Cucumis sativus] >KAE8646346.1 hypothetical protein...	[more]
XP_038896810.1	3.5e-98	96.24	60S ribosomal protein L19-1-like [Benincasa hispida]	[more]

BLAST of Sed0002569 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRX2	1.4e-89	85.51	60S ribosomal protein L19-1 OS=Arabidopsis thaliana OX=3702 GN=RPL19A PE=2 SV=1	[more]
P49693	5.3e-89	86.26	60S ribosomal protein L19-3 OS=Arabidopsis thaliana OX=3702 GN=RPL19C PE=2 SV=3	[more]
Q9LUQ6	5.0e-87	84.98	60S ribosomal protein L19-2 OS=Arabidopsis thaliana OX=3702 GN=RPL19B PE=2 SV=1	[more]
P36241	1.5e-62	70.88	60S ribosomal protein L19 OS=Drosophila melanogaster OX=7227 GN=RpL19 PE=1 SV=2	[more]
Q3T0W9	1.6e-61	69.61	60S ribosomal protein L19 OS=Bos taurus OX=9913 GN=RPL19 PE=2 SV=1	[more]

BLAST of Sed0002569 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KV74	4.8e-101	97.63	Ribosomal protein L19 OS=Cucurbita maxima OX=3661 GN=LOC111497884 PE=3 SV=1	[more]
A0A6J1H702	2.4e-100	97.16	Ribosomal protein L19 OS=Cucurbita moschata OX=3662 GN=LOC111460761 PE=3 SV=1	[more]
A0A5A7VS85	2.2e-98	95.77	Ribosomal protein L19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold41...	[more]
A0A1S3BSJ2	2.2e-98	95.77	Ribosomal protein L19 OS=Cucumis melo OX=3656 GN=LOC103492800 PE=3 SV=1	[more]
A0A6J1DJQ5	1.9e-97	96.24	Ribosomal protein L19 OS=Momordica charantia OX=3673 GN=LOC111021109 PE=3 SV=1	[more]

BLAST of Sed0002569 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02780.1	1.0e-90	85.51	Ribosomal protein L19e family protein	[more]
AT4G02230.1	3.8e-90	86.26	Ribosomal protein L19e family protein	[more]
AT3G16780.1	3.5e-88	84.98	Ribosomal protein L19e family protein	[more]
AT4G16030.1	7.5e-14	48.18	Ribosomal protein L19e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000196	Ribosomal protein L19/L19e	SMART	SM01416	Ribosomal_L19e_2	coord: 3..146 e-value: 6.3E-96 score: 334.7
IPR000196	Ribosomal protein L19/L19e	PFAM	PF01280	Ribosomal_L19e	coord: 4..145 e-value: 4.5E-64 score: 214.8
IPR000196	Ribosomal protein L19/L19e	HAMAP	MF_01475	Ribosomal_L19e	coord: 3..149 score: 20.398325
IPR015972	Ribosomal protein L19/L19e, domain 1	GENE3D	1.10.1650.10		coord: 2..56 e-value: 3.2E-31 score: 108.9
None	No IPR available	GENE3D	1.10.1200.240		coord: 57..189 e-value: 1.1E-58 score: 199.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..211
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..211
None	No IPR available	PANTHER	PTHR10722:SF26	RIBOSOMAL PROTEIN L19	coord: 1..211
IPR039547	60S ribosomal protein L19	PANTHER	PTHR10722	60S RIBOSOMAL PROTEIN L19	coord: 1..211
IPR023638	Ribosomal protein L19/L19e conserved site	PROSITE	PS00526	RIBOSOMAL_L19E	coord: 7..26
IPR033935	Ribosomal protein L19, eukaryotic	CDD	cd01417	Ribosomal_L19e_E	coord: 4..167 e-value: 2.31032E-79 score: 232.626
IPR035970	Ribosomal protein L19/L19e superfamily	SUPERFAMILY	48140	Ribosomal protein L19 (L19e)	coord: 3..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002569.1	Sed0002569.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0003735	structural constituent of ribosome