Sed0002554 (gene) Chayote v1

Overview


Name	Sed0002554
Type	gene
Organism	Sechium edule (Chayote v1)
Description	chitinase 2-like
Location	LG01: 7893293 .. 7895154 (+)
RNA-Seq Expression	Sed0002554
Synteny	Sed0002554

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGGAATCATGAGTAGTATTAGAAGTGCAGCCATTTTGGAGTTGGTTGCTGTTCTTGTTCTGGTACTCGCTCCGCCGTGGAAGGCGGCGGAGTCGGGTCGGGCGACGGTGTTTAGAGAGTATATAGGAGCTGAGTTCAATGATGTGAAATTTTCGGACGTTCATATTGATCCAAAGGTAAAACAGTTTGACTTTCTTCTGTCGTTTGCCATTGACTTCGATAGCTCCAGTGGTTCTTTCACTAATGGAGAATTCAACGTTTTCTGGGATTCCCAAAATCTCAGCCCTTCTGCTGTTGCTCACATTAAAAAGGTAATCATATACATACATTTTCGATAGTACAATAATGTAAATATGTACATTGCAAATTCTAGCATCTTTATTTTAATTATAATAATTTTTTAAAAAATGTTTCATGCTTGCCAACATATTTAAACTTTAATGGTTTTTTTTATTAATTTTATTTGATTGTTTAGTCATGTTTAACTTATTTTATATTTAATAAAAGGAAAATTGTATTGAATAAATTATTTTTACAAAATAATTATAAATATAAGTAGATTTTAATATATTTACTTCTAAAGTCATTAATACACTTTAATATGGTATTATAAATAGAAGATTTTGCATGTATAACAAAAAAGGGTAAAATATTTCCATGTATAGCACAAAATTAAAATTAATTCATTTCTAAAGTCATTAATACACTTTAATACATGATTTTCATGTATAACAAAAAATGCAAAATATTTTCATCTATAGCACAAAATTAAAATTAATTCATTTGTAGCAAAAAATTTAAATTAAATTCTATCACTAGTTGAGTTCCATTAATGATAGAATTCAATTAATGATAAACTCAATCTATCACTGCTTGAGTTTTCTATTAGCGATAGAAATTCAATATTTTTTTTACTAGTTGAGTGATAGAAATTAATGTGCTATAGATGAATTATTTTAAAAATTATGCTGCAAATATAATACAATATGTAAAATGTACGGTGTAAAATGTACTGCTAATGGTAAATTCTCTTATAAATATTCATTAGTACAATATTATATATGATAAATACTCATTAATATAGTATTTTTATCAATACCAAAGCTAAATTTGTAATTTTATTTTTTTTAAAATTTAAATATATTTACAATTATTTTTTAAAATTTTACTAATCTCGCAAGTTTCCCTCAATAAAATTATTCTTGTGCTTAAAAAGGATCGTTCAAACGTGAGAGTGGGAGTAAGTCTAGGAGGAGACAGCGTTGGAGATTCAGGCTTTGTTTATTTCGAACCTTCTTCCATAGCTTCATGGGTTTCCAACGCCGAACGCTCACTCACAAAACTCATCAACACCTACAACCTCGACGGCATCGACATCGACTACGAACACTTCAAGTCGGACCCGAACACATTCGCCGAGTGCATCGGACAGCTGATTGGAAGGCTAAAGAAGAAGGGTACCATCTCATTTGCTTCCATTGCCCCATTTGACGATCCTCAAGTTCAGAGCCATTACAAGGCCCTGTGGAGGAGCTATGGCCACTTGATAGATTATGTTAACTTTCAATTCTATGCTTATGATAAAACCACCACTGTTCCTCAGTTTATCAAACATTTCAAGAAACAACTCTCAAATTATGAAGGTGGTAGGGTTTTGGTAAGCTTGGCCAGCGACGATAGCGGCGGATTGTTGCCCGAGAACGGGTTTTTTAGGGCGTGTCGGAAGCTGAGAAGGGAGAAGCTTCTCCATGGAATCTTTATTTGGTCGGCTGATGATTCTAATGCCAATGGTTTTGGCTATGAAAAAATGGCACAAGCACTTCTAGCATTGCCCAACTAGACTCATAATCACCCAAAC

mRNA sequence

ATGAAAGGAATCATGAGTAGTATTAGAAGTGCAGCCATTTTGGAGTTGGTTGCTGTTCTTGTTCTGGTACTCGCTCCGCCGTGGAAGGCGGCGGAGTCGGGTCGGGCGACGGTGTTTAGAGAGTATATAGGAGCTGAGTTCAATGATGTGAAATTTTCGGACGTTCATATTGATCCAAAGGTAAAACAGTTTGACTTTCTTCTGTCGTTTGCCATTGACTTCGATAGCTCCAGTGGTTCTTTCACTAATGGAGAATTCAACGTTTTCTGGGATTCCCAAAATCTCAGCCCTTCTGCTGTTGCTCACATTAAAAAGGATCGTTCAAACGTGAGAGTGGGAGTAAGTCTAGGAGGAGACAGCGTTGGAGATTCAGGCTTTGTTTATTTCGAACCTTCTTCCATAGCTTCATGGGTTTCCAACGCCGAACGCTCACTCACAAAACTCATCAACACCTACAACCTCGACGGCATCGACATCGACTACGAACACTTCAAGTCGGACCCGAACACATTCGCCGAGTGCATCGGACAGCTGATTGGAAGGCTAAAGAAGAAGGGTACCATCTCATTTGCTTCCATTGCCCCATTTGACGATCCTCAAGTTCAGAGCCATTACAAGGCCCTGTGGAGGAGCTATGGCCACTTGATAGATTATGTTAACTTTCAATTCTATGCTTATGATAAAACCACCACTGTTCCTCAGTTTATCAAACATTTCAAGAAACAACTCTCAAATTATGAAGGTGGTAGGGTTTTGGTAAGCTTGGCCAGCGACGATAGCGGCGGATTGTTGCCCGAGAACGGGTTTTTTAGGGCGTGTCGGAAGCTGAGAAGGGAGAAGCTTCTCCATGGAATCTTTATTTGGTCGGCTGATGATTCTAATGCCAATGGTTTTGGCTATGAAAAAATGGCACAAGCACTTCTAGCATTGCCCAACTAGACTCATAATCACCCAAAC

Coding sequence (CDS)

ATGAAAGGAATCATGAGTAGTATTAGAAGTGCAGCCATTTTGGAGTTGGTTGCTGTTCTTGTTCTGGTACTCGCTCCGCCGTGGAAGGCGGCGGAGTCGGGTCGGGCGACGGTGTTTAGAGAGTATATAGGAGCTGAGTTCAATGATGTGAAATTTTCGGACGTTCATATTGATCCAAAGGTAAAACAGTTTGACTTTCTTCTGTCGTTTGCCATTGACTTCGATAGCTCCAGTGGTTCTTTCACTAATGGAGAATTCAACGTTTTCTGGGATTCCCAAAATCTCAGCCCTTCTGCTGTTGCTCACATTAAAAAGGATCGTTCAAACGTGAGAGTGGGAGTAAGTCTAGGAGGAGACAGCGTTGGAGATTCAGGCTTTGTTTATTTCGAACCTTCTTCCATAGCTTCATGGGTTTCCAACGCCGAACGCTCACTCACAAAACTCATCAACACCTACAACCTCGACGGCATCGACATCGACTACGAACACTTCAAGTCGGACCCGAACACATTCGCCGAGTGCATCGGACAGCTGATTGGAAGGCTAAAGAAGAAGGGTACCATCTCATTTGCTTCCATTGCCCCATTTGACGATCCTCAAGTTCAGAGCCATTACAAGGCCCTGTGGAGGAGCTATGGCCACTTGATAGATTATGTTAACTTTCAATTCTATGCTTATGATAAAACCACCACTGTTCCTCAGTTTATCAAACATTTCAAGAAACAACTCTCAAATTATGAAGGTGGTAGGGTTTTGGTAAGCTTGGCCAGCGACGATAGCGGCGGATTGTTGCCCGAGAACGGGTTTTTTAGGGCGTGTCGGAAGCTGAGAAGGGAGAAGCTTCTCCATGGAATCTTTATTTGGTCGGCTGATGATTCTAATGCCAATGGTTTTGGCTATGAAAAAATGGCACAAGCACTTCTAGCATTGCCCAACTAG

Protein sequence

MKGIMSSIRSAAILELVAVLVLVLAPPWKAAESGRATVFREYIGAEFNDVKFSDVHIDPKVKQFDFLLSFAIDFDSSSGSFTNGEFNVFWDSQNLSPSAVAHIKKDRSNVRVGVSLGGDSVGDSGFVYFEPSSIASWVSNAERSLTKLINTYNLDGIDIDYEHFKSDPNTFAECIGQLIGRLKKKGTISFASIAPFDDPQVQSHYKALWRSYGHLIDYVNFQFYAYDKTTTVPQFIKHFKKQLSNYEGGRVLVSLASDDSGGLLPENGFFRACRKLRREKLLHGIFIWSADDSNANGFGYEKMAQALLALPN

Homology

[Close]

BLAST of Sed0002554 vs. NCBI nr
Match: XP_023524573.1 (chitinase 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 490.7 bits (1262), Expect = 9.1e-135
Identity = 240/297 (80.81%), Postives = 264/297 (88.89%), Query Frame = 0


Query: 16  LVAVLVLVLAPPWKAAESGRATVFREYIGAEFNDVKFSDVHIDPKVKQFDFLLSFAIDFD 75
           +V +L++++APP  AA    ATVFREYIGAEFNDVKFSDV I+P V++F FLLSFAIDFD
Sbjct: 7   IVVLLLILVAPPSTAAVVVPATVFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFAIDFD 66

Query: 76  SSSGSFTNGEFNVFWDSQNLSPSAVAHIKKDRSNVRVGVSLGGDSVGDSGFVYFEPSSIA 135
           SS   FTNG FNVFWDS NLSPSAVA IKK+ SNVRVGVSLGGDSVGDSGFVYF+PSSIA
Sbjct: 67  SSRRCFTNGVFNVFWDSYNLSPSAVAAIKKNHSNVRVGVSLGGDSVGDSGFVYFKPSSIA 126

Query: 136 SWVSNAERSLTKLINTYNLDGIDIDYEHFKSDPNTFAECIGQLIGRLKKKGTISFASIAP 195
           SWVSNAERSLTKLINT+ LDGIDIDYEHF+SDPNTFAECIGQLI RLKKKG ISFASIAP
Sbjct: 127 SWVSNAERSLTKLINTFKLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAP 186

Query: 196 FDDPQVQSHYKALWRSYGHLIDYVNFQFYAYDKTTTVPQFIKHFKKQLSNYEGGRVLVSL 255
           FDD +VQ+HY ALW+ YGHLIDYVNFQFYAYDKTTTV QFIKHFK Q SNYEGGR+L SL
Sbjct: 187 FDDTEVQAHYLALWKRYGHLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSNYEGGRILASL 246

Query: 256 ASDDSGGLLPENGFFRACRKLRREKLLHGIFIWSADDSNANGFGYEKMAQALLALPN 313
           ASDD+GGLLP++GFF+ACR+LR +KLLHGIFIWSADDS A+GF YEK AQALL  PN
Sbjct: 247 ASDDTGGLLPKHGFFKACRRLRTDKLLHGIFIWSADDSQAHGFRYEKKAQALLQSPN 303

[Close]

BLAST of Sed0002554 vs. NCBI nr
Match: XP_022949055.1 (chitinase 2-like [Cucurbita moschata])

HSP 1 Score: 490.0 bits (1260), Expect = 1.6e-134
Identity = 240/297 (80.81%), Postives = 262/297 (88.22%), Query Frame = 0


Query: 16  LVAVLVLVLAPPWKAAESGRATVFREYIGAEFNDVKFSDVHIDPKVKQFDFLLSFAIDFD 75
           +V +L++++APP   A    A VFREYIGAEFNDVKFSDV I+P V++F FLLSFAIDFD
Sbjct: 5   IVVLLLILVAPPSNTAVVVPAAVFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFAIDFD 64

Query: 76  SSSGSFTNGEFNVFWDSQNLSPSAVAHIKKDRSNVRVGVSLGGDSVGDSGFVYFEPSSIA 135
           SS   FTNG FNVFWDS NLSPSAVA IKKD SNVRVGVSLGGDSVGDSGFVYF+PSSIA
Sbjct: 65  SSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKPSSIA 124

Query: 136 SWVSNAERSLTKLINTYNLDGIDIDYEHFKSDPNTFAECIGQLIGRLKKKGTISFASIAP 195
           SWVSNAERSLTKLINT+NLDGIDIDYEHF+SDPNTFAECIGQLI RLKKKG ISFASIAP
Sbjct: 125 SWVSNAERSLTKLINTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAP 184

Query: 196 FDDPQVQSHYKALWRSYGHLIDYVNFQFYAYDKTTTVPQFIKHFKKQLSNYEGGRVLVSL 255
           FDD +VQ+HY ALW+ YGHLIDYVNFQFYAYDKTTTV QFIKHFK Q SNYEGGR+L SL
Sbjct: 185 FDDAEVQTHYLALWKRYGHLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSNYEGGRILASL 244

Query: 256 ASDDSGGLLPENGFFRACRKLRREKLLHGIFIWSADDSNANGFGYEKMAQALLALPN 313
           ASDDSGGLL ++GFF+ACR+LR +KLLHGIFIWSADDS A+GF YEK AQALL  PN
Sbjct: 245 ASDDSGGLLSKHGFFKACRRLRTDKLLHGIFIWSADDSQAHGFRYEKKAQALLQSPN 301

[Close]

BLAST of Sed0002554 vs. NCBI nr
Match: KAG6607221.1 (hypothetical protein SDJN03_00563, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036906.1 hypothetical protein SDJN02_00526, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 489.6 bits (1259), Expect = 2.0e-134
Identity = 240/297 (80.81%), Postives = 261/297 (87.88%), Query Frame = 0


Query: 16  LVAVLVLVLAPPWKAAESGRATVFREYIGAEFNDVKFSDVHIDPKVKQFDFLLSFAIDFD 75
           +V +L++++APP   A    ATVFREYIGAEFNDVKFSDV I+P V++F FLLSFAIDFD
Sbjct: 7   IVVLLLILVAPPSNTAVVVPATVFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFAIDFD 66

Query: 76  SSSGSFTNGEFNVFWDSQNLSPSAVAHIKKDRSNVRVGVSLGGDSVGDSGFVYFEPSSIA 135
           SS   FTNG FNVFWDS NLSPSAVA IKKD SNVRVGVSLGGDSVGDSGFVYF+PSSIA
Sbjct: 67  SSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKPSSIA 126

Query: 136 SWVSNAERSLTKLINTYNLDGIDIDYEHFKSDPNTFAECIGQLIGRLKKKGTISFASIAP 195
           SWVSNAERSLTKLINT+NLDGIDIDYEHF+SDPNTFAECIGQLI RLKKKG ISFASIAP
Sbjct: 127 SWVSNAERSLTKLINTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAP 186

Query: 196 FDDPQVQSHYKALWRSYGHLIDYVNFQFYAYDKTTTVPQFIKHFKKQLSNYEGGRVLVSL 255
           FDD +VQ+HY ALW+ YGHLIDYVNFQFYAYDKTTTV QFIKHFK Q S YE GR+L SL
Sbjct: 187 FDDAEVQTHYLALWKRYGHLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSKYEDGRILASL 246

Query: 256 ASDDSGGLLPENGFFRACRKLRREKLLHGIFIWSADDSNANGFGYEKMAQALLALPN 313
           ASDDSGGLLP++GFF+ACR+LR +KLLHGIFIWSADDS A GF YEK AQALL  PN
Sbjct: 247 ASDDSGGLLPKHGFFKACRRLRTDKLLHGIFIWSADDSQARGFRYEKKAQALLQSPN 303

[Close]

BLAST of Sed0002554 vs. NCBI nr
Match: XP_038895814.1 (chitinase 2-like [Benincasa hispida])

HSP 1 Score: 485.7 bits (1249), Expect = 2.9e-133
Identity = 239/290 (82.41%), Postives = 258/290 (88.97%), Query Frame = 0


Query: 23  VLAPPWKAAESGRATVFREYIGAEFNDVKFSDVHIDPKVKQFDFLLSFAIDFDSSSGSFT 82
           ++APP  AA +GR  VFREYIGAEF DVKFSDV I+P V++F FLLSFAIDFDSS  SFT
Sbjct: 1   MVAPPSHAA-AGRGNVFREYIGAEFKDVKFSDVPINPNVEEFHFLLSFAIDFDSSRRSFT 60

Query: 83  NGEFNVFWDSQNLSPSAVAHIKKDRSNVRVGVSLGGDSVGDSGFVYFEPSSIASWVSNAE 142
           NG FNVFWDS NLSPSAVA IK+D SNVRVGVSLGGDSV   G V+F+PSSIASWVSNAE
Sbjct: 61  NGVFNVFWDSDNLSPSAVASIKRDHSNVRVGVSLGGDSVDKGGSVFFKPSSIASWVSNAE 120

Query: 143 RSLTKLINTYNLDGIDIDYEHFKSDPNTFAECIGQLIGRLKKKGTISFASIAPFDDPQVQ 202
            SLT+LINTYNLDGIDIDYEHFKSDP+TFA+CIGQLIGRLKKKG ISFASIAPFD  +VQ
Sbjct: 121 TSLTELINTYNLDGIDIDYEHFKSDPSTFAKCIGQLIGRLKKKGIISFASIAPFDKAEVQ 180

Query: 203 SHYKALWRSYGHLIDYVNFQFYAYDKTTTVPQFIKHFKKQLSNYEGGRVLVSLASDDSGG 262
           SHY ALWRSYGHLIDYVNFQFYAYDK TTV QFI+HFK QLSNYEGGRVL SLASDDSGG
Sbjct: 181 SHYLALWRSYGHLIDYVNFQFYAYDKGTTVGQFIQHFKAQLSNYEGGRVLASLASDDSGG 240

Query: 263 LLPENGFFRACRKLRREKLLHGIFIWSADDSNANGFGYEKMAQALLALPN 313
           L+P+NGFFRACRKL+ EKLL GIFIWSADDS +NGFGYEK AQALLA+PN
Sbjct: 241 LVPDNGFFRACRKLKTEKLLDGIFIWSADDSQSNGFGYEKKAQALLAMPN 289

[Close]

BLAST of Sed0002554 vs. NCBI nr
Match: XP_008457518.1 (PREDICTED: chitinase 2-like [Cucumis melo] >KAA0033881.1 chitinase 2-like [Cucumis melo var. makuwa] >TYK01265.1 chitinase 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 476.1 bits (1224), Expect = 2.3e-130
Identity = 239/311 (76.85%), Postives = 268/311 (86.17%), Query Frame = 0


Query: 3   GIMSSIRSAAILELVAVLVLVLAPPWKAAESGRATVFREYIGAEFNDVKFSDVHIDPKVK 62
           G+   ++S  IL L+ +L L +APP   A +G A VFREYIGAEFN+VKFSDV I   ++
Sbjct: 2   GMSRRMKSKPILPLLFLLQLFVAPPSLMA-AGPANVFREYIGAEFNNVKFSDVPIRSNIE 61

Query: 63  QFDFLLSFAIDFDSSSGSFTNGEFNVFWDSQNLSPSAVAHIKKDRSNVRVGVSLGGDSVG 122
           +F FLLSFAIDFD+SS SFTNG F+VFWDS NL+PSAVA IKKD SNVRVGVSLGGD+V 
Sbjct: 62  EFHFLLSFAIDFDASSRSFTNGAFDVFWDSDNLNPSAVASIKKDHSNVRVGVSLGGDTVD 121

Query: 123 DSGFVYFEPSSIASWVSNAERSLTKLINTYNLDGIDIDYEHFKSDPNTFAECIGQLIGRL 182
           + GFV+F+PSSI SWVSNAE SLTK+INTYNLDGIDIDYEHFKSDP+TFAECIGQLI RL
Sbjct: 122 NGGFVFFKPSSIHSWVSNAEHSLTKIINTYNLDGIDIDYEHFKSDPDTFAECIGQLIKRL 181

Query: 183 KKKGTISFASIAPFDDPQVQSHYKALWRSYGHLIDYVNFQFYAYDKTTTVPQFIKHFKKQ 242
           KKKG ISFASIAPFDD +VQSHY ALWRSYGHLIDYVNFQFYAYDK TTV QFI+HFK Q
Sbjct: 182 KKKGIISFASIAPFDDDEVQSHYLALWRSYGHLIDYVNFQFYAYDKGTTVGQFIRHFKDQ 241

Query: 243 LSNYEGGRVLVSLASDDS-GGLLPENGFFRACRKLRREKLLHGIFIWSADDSNANGFGYE 302
           +SNYEGGRVL SLASD+S GGL+PENGFF+ACR+L+REKLL GIFIWSADDS A GFGYE
Sbjct: 242 VSNYEGGRVLASLASDNSAGGLVPENGFFKACRRLKREKLLDGIFIWSADDSKAKGFGYE 301

Query: 303 KMAQALLALPN 313
           K AQ+LLA PN
Sbjct: 302 KEAQSLLATPN 311

[Close]

BLAST of Sed0002554 vs. ExPASy Swiss-Prot
Match: Q9SLP4 (Chitinase 1 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 4.0e-101
Identity = 189/311 (60.77%), Postives = 232/311 (74.60%), Query Frame = 0


Query: 5   MSSIRSAAILELVAVLVLVLAPPWKAAESGRATVFREYIGAEFNDVKFSDVHIDPKVKQF 64
           M+S+  +++L L   L+  L P         A VFREYIG++FNDVKFSDV I+P V  F
Sbjct: 1   MASVSPSSLLLLFFALLSPLLP------LTSALVFREYIGSQFNDVKFSDVPINPDV-DF 60

Query: 65  DFLLSFAIDFDS-SSGSFTNGEFNVFWDSQNLSPSAVAHIKKDRSNVRVGVSLGGDSVGD 124
            F+L+FAID+ S SS + TNG F  FWD+ NLSPS VA +K+  SNV+V +SLGGDSVG 
Sbjct: 61  HFILAFAIDYTSGSSPTPTNGNFKPFWDTNNLSPSQVAAVKRTHSNVKVSLSLGGDSVGG 120

Query: 125 SGFVYFEPSSIASWVSNAERSLTKLINTYNLDGIDIDYEHFKSDPNTFAECIGQLIGRLK 184
              V+F PSS++SWV NA  SLT++I  Y+LDGIDIDYEHFK DPNTFAECIGQL+ RLK
Sbjct: 121 KN-VFFSPSSVSSWVENAVSSLTRIIKQYHLDGIDIDYEHFKGDPNTFAECIGQLVTRLK 180

Query: 185 KKGTISFASIAPFDDPQVQSHYKALWRSYGHLIDYVNFQFYAYDKTTTVPQFIKHFKKQL 244
           K   +SF SIAPFDD QVQSHY+ALW  YGH IDYVNFQFYAY   T+V QF+K+F++Q 
Sbjct: 181 KNEVVSFVSIAPFDDAQVQSHYQALWEKYGHQIDYVNFQFYAYSARTSVEQFLKYFEEQS 240

Query: 245 SNYEGGRVLVSLASDDSGGLLPENGFFRACRKLRREKLLHGIFIWSADDS--NANGFGYE 304
           SNY GG+VLVS ++D SGGL P+NGFFRAC  L+++  LHGIF+WSADDS  + N F YE
Sbjct: 241 SNYHGGKVLVSFSTDSSGGLKPDNGFFRACSILKKQGKLHGIFVWSADDSLMSNNVFRYE 300

Query: 305 KMAQALLALPN 313
             AQ++LA  N
Sbjct: 301 MQAQSMLASVN 303

[Close]

BLAST of Sed0002554 vs. ExPASy Swiss-Prot
Match: Q7M443 (Chitinase 2 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 3.8e-99
Identity = 180/275 (65.45%), Postives = 215/275 (78.18%), Query Frame = 0


Query: 38  VFREYIGAEFNDVKFSDVHIDPKVKQFDFLLSFAIDFDS-SSGSFTNGEFNVFWDSQNLS 97
           +FREYIGA+FNDVKFSDV I+P V  F F+L+FAID+ S SS + TNG FN FWD+ NLS
Sbjct: 2   LFREYIGAQFNDVKFSDVPINPNV-DFHFILAFAIDYTSGSSPTPTNGNFNPFWDTNNLS 61

Query: 98  PSAVAHIKKDRSNVRVGVSLGGDSVGDSGFVYFEPSSIASWVSNAERSLTKLINTYNLDG 157
           PS VA IK+  +NV+V VSLGG+SVG    V+F PSS++SWV NA  SLTK+I  Y+LDG
Sbjct: 62  PSQVAAIKRTYNNVKVSVSLGGNSVGGER-VFFNPSSVSSWVDNAVSSLTKIIKQYHLDG 121

Query: 158 IDIDYEHFKSDPNTFAECIGQLIGRLKKKGTISFASIAPFDDPQVQSHYKALWRSYGHLI 217
           IDIDYEHFK DPNTFAECIGQL+ RLKK G +SF SIAPFDD QVQSHY+ALW  YGH I
Sbjct: 122 IDIDYEHFKGDPNTFAECIGQLVTRLKKNGVVSFVSIAPFDDAQVQSHYQALWEKYGHQI 181

Query: 218 DYVNFQFYAYDKTTTVPQFIKHFKKQLSNYEGGRVLVSLASDDSGGLLPENGFFRACRKL 277
           DYVNFQFY Y    +V QF+K+F+ Q SNY GG+VLVS ++D+SGGL P NGFF AC  L
Sbjct: 182 DYVNFQFYVYSSRMSVEQFLKYFEMQRSNYPGGKVLVSFSTDNSGGLKPRNGFFDACSIL 241

Query: 278 RREKLLHGIFIWSADDS--NANGFGYEKMAQALLA 310
           +++  LHGIF+WSADDS  + + F YE  AQ+LLA
Sbjct: 242 KKQGKLHGIFVWSADDSLMSNDVFKYEMQAQSLLA 274

[Close]

BLAST of Sed0002554 vs. ExPASy Swiss-Prot
Match: P39657 (RuBisCO-associated protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.3e-19
Identity = 63/193 (32.64%), Postives = 93/193 (48.19%), Query Frame = 0


Query: 33  SGRATVFREYIGAEFNDVKFSDVHIDPKVKQFDFLLSFAIDFDSSSGSFTNGEFNVFWDS 92
           S +  VFRE+     +D  F +  I   + +F   LS A D+D ++   TNG+F  +WD+
Sbjct: 2   STKFKVFREFT----SDDSFLNQVIPENITEFQVTLSLARDYDGNNS--TNGKFIPYWDT 61

Query: 93  QNLSPSAVAHIKKDRS----NVRVGVSLGGDSVGDSGFVYFEPSSIASWVSNAERSLTKL 152
           + ++P  +   KK        V+V VS+G  +     F     S+  +WVS A  SL  +
Sbjct: 62  EKVTPEVIKKFKKKYEPTALRVKVLVSIGNKN-KQFPFTIGSDSNSEAWVSEATASLKSI 121

Query: 153 INTYNLDGIDIDYEHFKSDPNTFAECIGQLIGRLKKKGTISFASIAPFDDPQVQSHYKAL 212
           I TYNLDGID+ YE   ++   F   +G L+  LK+   I+ AS A   D      Y  L
Sbjct: 122 IKTYNLDGIDVSYEDIAANEADFVNSVGGLVRNLKQNKLITVASFATSADAANNKFYNLL 181

Query: 213 WRSYGHLIDYVNF 222
           +  Y    D V F
Sbjct: 182 YAEYATFFDTVVF 187

[Close]

BLAST of Sed0002554 vs. ExPASy TrEMBL
Match: A0A6J1GBP9 (chitinase 2-like OS=Cucurbita moschata OX=3662 GN=LOC111452519 PE=3 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 7.6e-135
Identity = 240/297 (80.81%), Postives = 262/297 (88.22%), Query Frame = 0


Query: 16  LVAVLVLVLAPPWKAAESGRATVFREYIGAEFNDVKFSDVHIDPKVKQFDFLLSFAIDFD 75
           +V +L++++APP   A    A VFREYIGAEFNDVKFSDV I+P V++F FLLSFAIDFD
Sbjct: 5   IVVLLLILVAPPSNTAVVVPAAVFREYIGAEFNDVKFSDVPINPNVEEFHFLLSFAIDFD 64

Query: 76  SSSGSFTNGEFNVFWDSQNLSPSAVAHIKKDRSNVRVGVSLGGDSVGDSGFVYFEPSSIA 135
           SS   FTNG FNVFWDS NLSPSAVA IKKD SNVRVGVSLGGDSVGDSGFVYF+PSSIA
Sbjct: 65  SSRRCFTNGVFNVFWDSYNLSPSAVAAIKKDHSNVRVGVSLGGDSVGDSGFVYFKPSSIA 124

Query: 136 SWVSNAERSLTKLINTYNLDGIDIDYEHFKSDPNTFAECIGQLIGRLKKKGTISFASIAP 195
           SWVSNAERSLTKLINT+NLDGIDIDYEHF+SDPNTFAECIGQLI RLKKKG ISFASIAP
Sbjct: 125 SWVSNAERSLTKLINTFNLDGIDIDYEHFESDPNTFAECIGQLIRRLKKKGVISFASIAP 184

Query: 196 FDDPQVQSHYKALWRSYGHLIDYVNFQFYAYDKTTTVPQFIKHFKKQLSNYEGGRVLVSL 255
           FDD +VQ+HY ALW+ YGHLIDYVNFQFYAYDKTTTV QFIKHFK Q SNYEGGR+L SL
Sbjct: 185 FDDAEVQTHYLALWKRYGHLIDYVNFQFYAYDKTTTVHQFIKHFKAQSSNYEGGRILASL 244

Query: 256 ASDDSGGLLPENGFFRACRKLRREKLLHGIFIWSADDSNANGFGYEKMAQALLALPN 313
           ASDDSGGLL ++GFF+ACR+LR +KLLHGIFIWSADDS A+GF YEK AQALL  PN
Sbjct: 245 ASDDSGGLLSKHGFFKACRRLRTDKLLHGIFIWSADDSQAHGFRYEKKAQALLQSPN 301

[Close]

BLAST of Sed0002554 vs. ExPASy TrEMBL
Match: A0A5A7SWP3 (Chitinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00520 PE=3 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 1.1e-130
Identity = 239/311 (76.85%), Postives = 268/311 (86.17%), Query Frame = 0


Query: 3   GIMSSIRSAAILELVAVLVLVLAPPWKAAESGRATVFREYIGAEFNDVKFSDVHIDPKVK 62
           G+   ++S  IL L+ +L L +APP   A +G A VFREYIGAEFN+VKFSDV I   ++
Sbjct: 2   GMSRRMKSKPILPLLFLLQLFVAPPSLMA-AGPANVFREYIGAEFNNVKFSDVPIRSNIE 61

Query: 63  QFDFLLSFAIDFDSSSGSFTNGEFNVFWDSQNLSPSAVAHIKKDRSNVRVGVSLGGDSVG 122
           +F FLLSFAIDFD+SS SFTNG F+VFWDS NL+PSAVA IKKD SNVRVGVSLGGD+V 
Sbjct: 62  EFHFLLSFAIDFDASSRSFTNGAFDVFWDSDNLNPSAVASIKKDHSNVRVGVSLGGDTVD 121

Query: 123 DSGFVYFEPSSIASWVSNAERSLTKLINTYNLDGIDIDYEHFKSDPNTFAECIGQLIGRL 182
           + GFV+F+PSSI SWVSNAE SLTK+INTYNLDGIDIDYEHFKSDP+TFAECIGQLI RL
Sbjct: 122 NGGFVFFKPSSIHSWVSNAEHSLTKIINTYNLDGIDIDYEHFKSDPDTFAECIGQLIKRL 181

Query: 183 KKKGTISFASIAPFDDPQVQSHYKALWRSYGHLIDYVNFQFYAYDKTTTVPQFIKHFKKQ 242
           KKKG ISFASIAPFDD +VQSHY ALWRSYGHLIDYVNFQFYAYDK TTV QFI+HFK Q
Sbjct: 182 KKKGIISFASIAPFDDDEVQSHYLALWRSYGHLIDYVNFQFYAYDKGTTVGQFIRHFKDQ 241

Query: 243 LSNYEGGRVLVSLASDDS-GGLLPENGFFRACRKLRREKLLHGIFIWSADDSNANGFGYE 302
           +SNYEGGRVL SLASD+S GGL+PENGFF+ACR+L+REKLL GIFIWSADDS A GFGYE
Sbjct: 242 VSNYEGGRVLASLASDNSAGGLVPENGFFKACRRLKREKLLDGIFIWSADDSKAKGFGYE 301

Query: 303 KMAQALLALPN 313
           K AQ+LLA PN
Sbjct: 302 KEAQSLLATPN 311

[Close]

BLAST of Sed0002554 vs. ExPASy TrEMBL
Match: A0A1S3C5A3 (chitinase 2-like OS=Cucumis melo OX=3656 GN=LOC103497192 PE=3 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 1.1e-130
Identity = 239/311 (76.85%), Postives = 268/311 (86.17%), Query Frame = 0


Query: 3   GIMSSIRSAAILELVAVLVLVLAPPWKAAESGRATVFREYIGAEFNDVKFSDVHIDPKVK 62
           G+   ++S  IL L+ +L L +APP   A +G A VFREYIGAEFN+VKFSDV I   ++
Sbjct: 2   GMSRRMKSKPILPLLFLLQLFVAPPSLMA-AGPANVFREYIGAEFNNVKFSDVPIRSNIE 61

Query: 63  QFDFLLSFAIDFDSSSGSFTNGEFNVFWDSQNLSPSAVAHIKKDRSNVRVGVSLGGDSVG 122
           +F FLLSFAIDFD+SS SFTNG F+VFWDS NL+PSAVA IKKD SNVRVGVSLGGD+V 
Sbjct: 62  EFHFLLSFAIDFDASSRSFTNGAFDVFWDSDNLNPSAVASIKKDHSNVRVGVSLGGDTVD 121

Query: 123 DSGFVYFEPSSIASWVSNAERSLTKLINTYNLDGIDIDYEHFKSDPNTFAECIGQLIGRL 182
           + GFV+F+PSSI SWVSNAE SLTK+INTYNLDGIDIDYEHFKSDP+TFAECIGQLI RL
Sbjct: 122 NGGFVFFKPSSIHSWVSNAEHSLTKIINTYNLDGIDIDYEHFKSDPDTFAECIGQLIKRL 181

Query: 183 KKKGTISFASIAPFDDPQVQSHYKALWRSYGHLIDYVNFQFYAYDKTTTVPQFIKHFKKQ 242
           KKKG ISFASIAPFDD +VQSHY ALWRSYGHLIDYVNFQFYAYDK TTV QFI+HFK Q
Sbjct: 182 KKKGIISFASIAPFDDDEVQSHYLALWRSYGHLIDYVNFQFYAYDKGTTVGQFIRHFKDQ 241

Query: 243 LSNYEGGRVLVSLASDDS-GGLLPENGFFRACRKLRREKLLHGIFIWSADDSNANGFGYE 302
           +SNYEGGRVL SLASD+S GGL+PENGFF+ACR+L+REKLL GIFIWSADDS A GFGYE
Sbjct: 242 VSNYEGGRVLASLASDNSAGGLVPENGFFKACRRLKREKLLDGIFIWSADDSKAKGFGYE 301

Query: 303 KMAQALLALPN 313
           K AQ+LLA PN
Sbjct: 302 KEAQSLLATPN 311

[Close]

BLAST of Sed0002554 vs. ExPASy TrEMBL
Match: A0A0A0LV90 (Glyco_hydro_18 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G496300 PE=3 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 2.8e-129
Identity = 232/310 (74.84%), Postives = 266/310 (85.81%), Query Frame = 0


Query: 3   GIMSSIRSAAILELVAVLVLVLAPPWKAAESGRATVFREYIGAEFNDVKFSDVHIDPKVK 62
           G+   ++S AIL L+ +L L++APP   A +G A VFREYIGAEFN+VKFSDV I   V+
Sbjct: 2   GLSRKMKSEAILPLLFLLQLLVAPPSLMA-AGPANVFREYIGAEFNNVKFSDVPIHSNVE 61

Query: 63  QFDFLLSFAIDFDSSSGSFTNGEFNVFWDSQNLSPSAVAHIKKDRSNVRVGVSLGGDSVG 122
           +F FLLSFAIDFD+SS SFTNG F+VFWDS NL+PSAVA IKKD SNVRVGVSLGGD+V 
Sbjct: 62  EFHFLLSFAIDFDASSRSFTNGAFDVFWDSDNLNPSAVASIKKDHSNVRVGVSLGGDTVD 121

Query: 123 DSGFVYFEPSSIASWVSNAERSLTKLINTYNLDGIDIDYEHFKSDPNTFAECIGQLIGRL 182
           + G V+F+PSSI SWVSNAE SLTK+I TYNLDGIDIDYEHFKSDP+TFAECIGQLI RL
Sbjct: 122 NGGSVFFKPSSIHSWVSNAEHSLTKIIKTYNLDGIDIDYEHFKSDPDTFAECIGQLIKRL 181

Query: 183 KKKGTISFASIAPFDDPQVQSHYKALWRSYGHLIDYVNFQFYAYDKTTTVPQFIKHFKKQ 242
           KKKG ISFASIAPFDD +VQSHY ALW+ YGHLIDYVNFQFYAYDK TT+ QFI+HFK Q
Sbjct: 182 KKKGIISFASIAPFDDDEVQSHYLALWKRYGHLIDYVNFQFYAYDKGTTIGQFIQHFKDQ 241

Query: 243 LSNYEGGRVLVSLASDDSGGLLPENGFFRACRKLRREKLLHGIFIWSADDSNANGFGYEK 302
           +SNYEGGR+L SL SDDSGGL+P+NGFF+ACR+L++EKLL+GIFIWSADDS A GF YEK
Sbjct: 242 MSNYEGGRILASLVSDDSGGLVPKNGFFKACRRLKKEKLLNGIFIWSADDSQAKGFDYEK 301

Query: 303 MAQALLALPN 313
            AQ+LLA PN
Sbjct: 302 TAQSLLAKPN 310

[Close]

BLAST of Sed0002554 vs. ExPASy TrEMBL
Match: A0A6J1DUG9 (chitinase 2-like OS=Momordica charantia OX=3673 GN=LOC111023583 PE=4 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 1.7e-126
Identity = 233/297 (78.45%), Postives = 254/297 (85.52%), Query Frame = 0


Query: 16  LVAVLVLVLAPPWKAAESGRATVFREYIGAEFNDVKFSDVHIDPKVKQFDFLLSFAIDFD 75
           LVA+ +L+L PP  AA    A +FREYIGAEF DVKFSDV I+P V +F FLLSFAIDFD
Sbjct: 13  LVALQLLLLFPPSHAA----AKLFREYIGAEFKDVKFSDVPINPDV-EFHFLLSFAIDFD 72

Query: 76  SSSGSFTNGEFNVFWDSQNLSPSAVAHIKKDRSNVRVGVSLGGDSVGDSGFVYFEPSSIA 135
           +S  SFTNG FNVFWDS NL+PS V  IKKD SNV+VG+S+GGD+V  +GF YF+PSSI 
Sbjct: 73  ASRRSFTNGIFNVFWDSHNLNPSDVVAIKKDHSNVKVGLSIGGDTV-PNGFAYFKPSSID 132

Query: 136 SWVSNAERSLTKLINTYNLDGIDIDYEHFKSDPNTFAECIGQLIGRLKKKGTISFASIAP 195
           SWVSNAERSLTKLIN +NLD IDIDYEHFKSDPNTFAECIG+LI RLKKKG ISFASIAP
Sbjct: 133 SWVSNAERSLTKLINAFNLDSIDIDYEHFKSDPNTFAECIGRLIKRLKKKGAISFASIAP 192

Query: 196 FDDPQVQSHYKALWRSYGHLIDYVNFQFYAYDKTTTVPQFIKHFKKQLSNYEGGRVLVSL 255
           FD  +VQSHY ALWRSYGHLIDYVNFQFYAYDKTTTVPQFI+HFK Q SNYEGGRVL SL
Sbjct: 193 FDKAEVQSHYLALWRSYGHLIDYVNFQFYAYDKTTTVPQFIQHFKAQTSNYEGGRVLASL 252

Query: 256 ASDDSGGLLPENGFFRACRKLRREKLLHGIFIWSADDSNANGFGYEKMAQALLALPN 313
            SDDSGGLL ENGFF ACR+LR EKLLHGIF+WSADDS ANGFGYEK AQ LLA+PN
Sbjct: 253 VSDDSGGLLAENGFFTACRRLRAEKLLHGIFVWSADDSIANGFGYEKKAQELLAMPN 303

The following BLAST results are available for this feature:

BLAST of Sed0002554 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023524573.1	9.1e-135	80.81	chitinase 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022949055.1	1.6e-134	80.81	chitinase 2-like [Cucurbita moschata]	[more]
KAG6607221.1	2.0e-134	80.81	hypothetical protein SDJN03_00563, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038895814.1	2.9e-133	82.41	chitinase 2-like [Benincasa hispida]	[more]
XP_008457518.1	2.3e-130	76.85	PREDICTED: chitinase 2-like [Cucumis melo] >KAA0033881.1 chitinase 2-like [Cucum...	[more]

BLAST of Sed0002554 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SLP4	4.0e-101	60.77	Chitinase 1 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1	[more]
Q7M443	3.8e-99	65.45	Chitinase 2 OS=Tulipa saxatilis subsp. bakeri OX=110455 PE=1 SV=1	[more]
P39657	1.3e-19	32.64	RuBisCO-associated protein OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of Sed0002554 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GBP9	7.6e-135	80.81	chitinase 2-like OS=Cucurbita moschata OX=3662 GN=LOC111452519 PE=3 SV=1	[more]
A0A5A7SWP3	1.1e-130	76.85	Chitinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G0052...	[more]
A0A1S3C5A3	1.1e-130	76.85	chitinase 2-like OS=Cucumis melo OX=3656 GN=LOC103497192 PE=3 SV=1	[more]
A0A0A0LV90	2.8e-129	74.84	Glyco_hydro_18 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G496...	[more]
A0A6J1DUG9	1.7e-126	78.45	chitinase 2-like OS=Momordica charantia OX=3673 GN=LOC111023583 PE=4 SV=1	[more]

BLAST of Sed0002554 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000677	Chitinase-like	PRINTS	PR00551	2SGLOBULIN	coord: 36..49 score: 46.43 coord: 83..98 score: 27.6 coord: 100..118 score: 36.4 coord: 271..290 score: 39.17
None	No IPR available	GENE3D	3.20.20.80	Glycosidases	coord: 36..310 e-value: 1.1E-81 score: 276.4
None	No IPR available	PANTHER	PTHR46476	CHITINASE 2-LIKE	coord: 7..310
None	No IPR available	PANTHER	PTHR46476:SF4	2, PUTATIVE, EXPRESSED-RELATED	coord: 7..310
None	No IPR available	CDD	cd06544	GH18_narbonin	coord: 38..293 e-value: 2.17919E-119 score: 341.658
IPR001223	Glycoside hydrolase family 18, catalytic domain	PFAM	PF00704	Glyco_hydro_18	coord: 88..229 e-value: 5.8E-14 score: 52.5
IPR001223	Glycoside hydrolase family 18, catalytic domain	PROSITE	PS51910	GH18_2	coord: 37..312 score: 24.297369
IPR001579	Glycosyl hydrolases family 18 (GH18) active site	PROSITE	PS01095	GH18_1	coord: 154..162
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 37..310

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002554.1	Sed0002554.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds