Sed0002485 (gene) Chayote v1

Overview


Name	Sed0002485
Type	gene
Organism	Sechium edule (Chayote v1)
Description	LOB domain-containing protein
Location	LG12: 34257423 .. 34260271 (-)
RNA-Seq Expression	Sed0002485
Synteny	Sed0002485

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTTTCTCTCTCTTACTCTCTCTCTCTTTCTTCTTCTTTTCATCTAGGGTTTTGCTTCACATTCATCAAAAGACCCTAAATTTTGTTTATCAAAGGGAAAAGGAAGAAGGGTTTTGAAGTTTTCACTCTAGAAAGGTAAAAAGGAATTCCTTTTTTTGGTTGATCTTTTTGTTAATGAATTGATTCTAAAGAAATAGCAAAGACCTAGAGATCACACAAGAGAGGTAAGTTTATGTAGCTCTCTTTGTTTTGTATAGCTAAAAAAAATGCTTGCTCTTATAAATTATGTTTGTTTTTTTTTCTTTGTATAGGTAAGAAAAAGGCTAAATAGAGAATTTAATGTAGACCCTTTGAGGAATATGGGCTAGGTAGAGCTTAATTTAGGGTTATATGATTTAATTTGACATTGTGTGAATTAAAGAAATATACATAAATTGTCATGACTTTACTATTTGTTTCACCAGTCATATCTCATCTTCTTCACCTGATTTTACGCAACCTACTACTTTTTTCTCAATTCACACTTTGAAAAAAAAAATCAGAAAGAGAGAGATAGAAAAAGAAAAAAAAGAGTGTAGATATGCAACAAGCTTTAAGAGAATGCAGAGAGAATATAATTATTAATAATTAAGTTGTAAGAATCTAAATCTATTTAGGAATGTGAGAAACAAATAATTTGTTCAAATGCTTTCATCAGTTATTTGGTCTTGACCTAGGGGTACAATGCCTCTAAATCTCAGTGCTTTGCATTGTTTACCCTTTTTACATAAAATGATTTCGCTTGTGCAGGTAGCAAACAAGTTGTTAATGAACTATGTAAATCCGTGTATTTATTTTTTTCCATATTTATTCAAAATTTGTTTTTGTATGTAGAGAAACTTATGGTCTAGAAGGGATCATACAATTTTTTTTTCTTTTTTGAAGAAAGATACAATATATTATAAAAGAGGATTAAAAGTCATGATTACATAATCCTCTCCAGTTAAGAGCGATAATAGCTAAATCAAAATGACGAAATAGAGAGGATCTAGAACACCAAGAAGTCATATATAATGTAACAAATATGAGGCATAATTCAAACTAAACAACTATATTAGCGAACGTGATTTGAACTTATAACTTTTAGATCTATCGAAAGTATTCGGTAAGTATTGCACAAAAGAAGAACAATAAAACAATAAAAATAAACATAATTGCAAATTTTAGGGAGCTATATGAGAAGAAGTTTCTCTGCAAATTTGAATAGGGAGTTGTACACGTGTGTGTCTGTCAATGGGAGAGTGTGCACGCGTGTGAAAGAAGAAAAAGTGTGCGAGAAAAGACACAAGTTTAAGATCTTTATTGATTCTGCACATAACTTAAAACTTGGGATCAGCTACTAACTTTCATCTGATTTTCATCTGACCTATTCTGGGAATTTCCTTTACTTTTACTCTTCACACAAACACACAAACAATAATATATATTAAAATGAACAAAAGAAGCATGAATTTTGAAGACAGAGTTGAAATATCACATGGAGTATTGGTTTTATTTTCTTTGAGTATTTAATTAAAATTTAAGTAGGCTTCGAGAGGCGGCCTCGTTGGAAAAGGTTGGAGAGGTGAGAAAACTACGAGTGAGCTTAATTGTAAAATACTTACTTAAGACATGTGTAGGCGTCGTTTAGGGGATGTTTGGGGGAAGATGGAGATTAAAGGAAGTACATGAACAAGAAAAATTAATGAATAGAATGATTATCTATATTTAAGGTGAAGAGAATGACCGAATGAATCAATTGCACGATTGGTTATCTGATTTGGTGTTAATTCATTTTCACTCTATGGTCATGGGTTCGATTCCTAGAATCGGTGTTCGTAATCTCACTTCCCCCAACTTGTACTCAAAAAAAAAAAAAAAAAGAAGAATAAAAAAGTTGTTATAGAAAAATGAGATTATGGAGAAAATGATTTTTGGTGATCTAAACATAAATTATCATCTTCCTTTTCATTCTTCCCATTTAACAAAAAAATGGAGAAAAGAAAGGATGGATTGTTTAGAAATTTGATGTTCTTACTTTGATTGGCTAGGGCAGATGGCATCATCAAGTTCTTACAACTCTCCATGTGCTGCTTGCAAGTTCTTGAGAAGAAAATGCATGCCTGGTTGCATTTTTGCTCCTTATTTCCCACCAGAAGAGCCTCAGAAGTTTGCCAATGTCCACAAGATCTTTGGGGCAAGCAATGTGACCAAGCTGCTTAATGAGCTTCTGCCCCACCAAAGAGAGGATGCAGTCAACTCTCTAGCCTACGAGGCCGAGGCTCGTGTCCGAGACCCGGTCTACGGCTGCGTCGGAGCCATCTCGTTCCTCCAAAGGCAAATCCAAAGGCTCCAGAAGGAACTCGACGCTGCAAACTCCGACCTAATTCGGTTCGCTTGCAACGAGATCCCTAATACGGGACCGAGTCATGTGGTTCAGCACATCCCGACCCTTCGCCCGAGGGCGTTTGATCAGTATAACACAAGTGGATATTATAATCAACATCTTCCTGCTTTTAATCCCATGGCTTACTCAATGCCTTGGAATGAAAACTCTTCAGGAAATAACATCAATGGAGGAGGAGGGGATGGTAATATATGAACAAAACTTTTCAAAATTCCTCAAAATGGGAAAAAAAAGAAAACCCTTTTAGGGTTTTTTTTTCAACCCTAGAGAGAAAACTTTCTCTCTTATTTGGTAAGTCACTTGCTCATATATATATATATATGAAGGTTTGCCCTTATTCATTTTTCCTAGCTAGATGAATTTAGTTAATTTTTCTAGTGGCATTTAGAGGTTTTTGGGATTTAAGTTTTAAACCCCAAAAT

mRNA sequence

CTTCTTTCTCTCTCTTACTCTCTCTCTCTTTCTTCTTCTTTTCATCTAGGGTTTTGCTTCACATTCATCAAAAGACCCTAAATTTTGTTTATCAAAGGGAAAAGGAAGAAGGGTTTTGAAGTTTTCACTCTAGAAAGATGGCATCATCAAGTTCTTACAACTCTCCATGTGCTGCTTGCAAGTTCTTGAGAAGAAAATGCATGCCTGGTTGCATTTTTGCTCCTTATTTCCCACCAGAAGAGCCTCAGAAGTTTGCCAATGTCCACAAGATCTTTGGGGCAAGCAATGTGACCAAGCTGCTTAATGAGCTTCTGCCCCACCAAAGAGAGGATGCAGTCAACTCTCTAGCCTACGAGGCCGAGGCTCGTGTCCGAGACCCGGTCTACGGCTGCGTCGGAGCCATCTCGTTCCTCCAAAGGCAAATCCAAAGGCTCCAGAAGGAACTCGACGCTGCAAACTCCGACCTAATTCGGTTCGCTTGCAACGAGATCCCTAATACGGGACCGAGTCATGTGGTTCAGCACATCCCGACCCTTCGCCCGAGGGCGTTTGATCAGTATAACACAAGTGGATATTATAATCAACATCTTCCTGCTTTTAATCCCATGGCTTACTCAATGCCTTGGAATGAAAACTCTTCAGGAAATAACATCAATGGAGGAGGAGGGGATGGTAATATATGAACAAAACTTTTCAAAATTCCTCAAAATGGGAAAAAAAAGAAAACCCTTTTAGGGTTTTTTTTTCAACCCTAGAGAGAAAACTTTCTCTCTTATTTGGTAAGTCACTTGCTCATATATATATATATATGAAGGTTTGCCCTTATTCATTTTTCCTAGCTAGATGAATTTAGTTAATTTTTCTAGTGGCATTTAGAGGTTTTTGGGATTTAAGTTTTAAACCCCAAAAT

Coding sequence (CDS)

ATGGCATCATCAAGTTCTTACAACTCTCCATGTGCTGCTTGCAAGTTCTTGAGAAGAAAATGCATGCCTGGTTGCATTTTTGCTCCTTATTTCCCACCAGAAGAGCCTCAGAAGTTTGCCAATGTCCACAAGATCTTTGGGGCAAGCAATGTGACCAAGCTGCTTAATGAGCTTCTGCCCCACCAAAGAGAGGATGCAGTCAACTCTCTAGCCTACGAGGCCGAGGCTCGTGTCCGAGACCCGGTCTACGGCTGCGTCGGAGCCATCTCGTTCCTCCAAAGGCAAATCCAAAGGCTCCAGAAGGAACTCGACGCTGCAAACTCCGACCTAATTCGGTTCGCTTGCAACGAGATCCCTAATACGGGACCGAGTCATGTGGTTCAGCACATCCCGACCCTTCGCCCGAGGGCGTTTGATCAGTATAACACAAGTGGATATTATAATCAACATCTTCCTGCTTTTAATCCCATGGCTTACTCAATGCCTTGGAATGAAAACTCTTCAGGAAATAACATCAATGGAGGAGGAGGGGATGGTAATATATGA

Protein sequence

MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQIQRLQKELDAANSDLIRFACNEIPNTGPSHVVQHIPTLRPRAFDQYNTSGYYNQHLPAFNPMAYSMPWNENSSGNNINGGGGDGNI

Homology

[Close]

BLAST of Sed0002485 vs. NCBI nr
Match: XP_023515750.1 (protein LATERAL ORGAN BOUNDARIES-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 330.9 bits (847), Expect = 7.0e-87
Identity = 163/184 (88.59%), Postives = 169/184 (91.85%), Query Frame = 0


Query: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
           MASSSSYNSPCAACKFLRRKCM GCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP
Sbjct: 1   MASSSSYNSPCAACKFLRRKCMSGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60

Query: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQIQRLQKELDAANSDLIRFACNEIPN 120
           HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQ+QRLQKELDAAN+DLIR+ACNEIPN
Sbjct: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN 120

Query: 121 TGPSHVVQHIPTLRPRAFDQYNTS---GYYNQHLPAFNPMAYSMPWNENSSGNNINGGGG 180
            G SHVVQ  P  RPRA DQY+TS   GYYNQHLPAF PMAY +PWNENS GN+IN GGG
Sbjct: 121 AGVSHVVQPSPGARPRALDQYHTSSSTGYYNQHLPAF-PMAYPLPWNENSPGNDINEGGG 180

Query: 181 DGNI 182
           DGNI
Sbjct: 181 DGNI 183

[Close]

BLAST of Sed0002485 vs. NCBI nr
Match: XP_038880086.1 (protein LATERAL ORGAN BOUNDARIES-like [Benincasa hispida])

HSP 1 Score: 329.3 bits (843), Expect = 2.0e-86
Identity = 164/186 (88.17%), Postives = 169/186 (90.86%), Query Frame = 0


Query: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
           MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP
Sbjct: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60

Query: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQIQRLQKELDAANSDLIRFACNEIPN 120
           HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQ+QRLQKELDAAN+DLIRFACNEIPN
Sbjct: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRFACNEIPN 120

Query: 121 TGPSHVVQHIPTLRPRAFDQY-----NTSGYYNQHLPAFNPMAYSMPWNENSSGNNINGG 180
            G + VVQ     RPRA DQY     +TSGYYNQHLPAF PMAYS+PWNENSSGNNIN G
Sbjct: 121 AGVNQVVQPNLGARPRALDQYHTSSSSTSGYYNQHLPAF-PMAYSLPWNENSSGNNINEG 180

Query: 181 GGDGNI 182
           GGD NI
Sbjct: 181 GGDANI 185

[Close]

BLAST of Sed0002485 vs. NCBI nr
Match: KAG6589428.1 (Protein LATERAL ORGAN BOUNDARIES, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 329.3 bits (843), Expect = 2.0e-86
Identity = 162/184 (88.04%), Postives = 169/184 (91.85%), Query Frame = 0


Query: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
           MASSSSYNSPCAACKFLRRKCM GCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP
Sbjct: 30  MASSSSYNSPCAACKFLRRKCMSGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 89

Query: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQIQRLQKELDAANSDLIRFACNEIPN 120
           HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQ+QRLQKELDAAN+DLIR+ACNEIPN
Sbjct: 90  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN 149

Query: 121 TGPSHVVQHIPTLRPRAFDQYNTS---GYYNQHLPAFNPMAYSMPWNENSSGNNINGGGG 180
            G SHVVQ  P  RPRA DQ++TS   GYYNQHLPAF PMAY +PWNENS GN+IN GGG
Sbjct: 150 AGVSHVVQPSPGARPRALDQFHTSSSTGYYNQHLPAF-PMAYPLPWNENSPGNDINEGGG 209

Query: 181 DGNI 182
           DGNI
Sbjct: 210 DGNI 212

[Close]

BLAST of Sed0002485 vs. NCBI nr
Match: XP_022922076.1 (LOB domain-containing protein 25-like isoform X2 [Cucurbita moschata] >XP_022922077.1 LOB domain-containing protein 25-like isoform X2 [Cucurbita moschata] >XP_022922078.1 LOB domain-containing protein 25-like isoform X2 [Cucurbita moschata] >KAG7023106.1 Protein LATERAL ORGAN BOUNDARIES [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 329.3 bits (843), Expect = 2.0e-86
Identity = 162/184 (88.04%), Postives = 169/184 (91.85%), Query Frame = 0


Query: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
           MASSSSYNSPCAACKFLRRKCM GCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP
Sbjct: 1   MASSSSYNSPCAACKFLRRKCMSGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60

Query: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQIQRLQKELDAANSDLIRFACNEIPN 120
           HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQ+QRLQKELDAAN+DLIR+ACNEIPN
Sbjct: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN 120

Query: 121 TGPSHVVQHIPTLRPRAFDQYNTS---GYYNQHLPAFNPMAYSMPWNENSSGNNINGGGG 180
            G SHVVQ  P  RPRA DQ++TS   GYYNQHLPAF PMAY +PWNENS GN+IN GGG
Sbjct: 121 AGVSHVVQPSPGARPRALDQFHTSSSTGYYNQHLPAF-PMAYPLPWNENSPGNDINEGGG 180

Query: 181 DGNI 182
           DGNI
Sbjct: 181 DGNI 183

[Close]

BLAST of Sed0002485 vs. NCBI nr
Match: XP_022922073.1 (protein LATERAL ORGAN BOUNDARIES-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 329.3 bits (843), Expect = 2.0e-86
Identity = 162/184 (88.04%), Postives = 169/184 (91.85%), Query Frame = 0


Query: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
           MASSSSYNSPCAACKFLRRKCM GCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP
Sbjct: 59  MASSSSYNSPCAACKFLRRKCMSGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 118

Query: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQIQRLQKELDAANSDLIRFACNEIPN 120
           HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQ+QRLQKELDAAN+DLIR+ACNEIPN
Sbjct: 119 HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN 178

Query: 121 TGPSHVVQHIPTLRPRAFDQYNTS---GYYNQHLPAFNPMAYSMPWNENSSGNNINGGGG 180
            G SHVVQ  P  RPRA DQ++TS   GYYNQHLPAF PMAY +PWNENS GN+IN GGG
Sbjct: 179 AGVSHVVQPSPGARPRALDQFHTSSSTGYYNQHLPAF-PMAYPLPWNENSPGNDINEGGG 238

Query: 181 DGNI 182
           DGNI
Sbjct: 239 DGNI 241

[Close]

BLAST of Sed0002485 vs. ExPASy Swiss-Prot
Match: Q9FML4 (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.2e-57
Identity = 120/187 (64.17%), Postives = 136/187 (72.73%), Query Frame = 0


Query: 2   ASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPH 61
           +SS+SYNSPCAACKFLRRKCMPGCIFAPYFPPEEP KFANVHKIFGASNVTKLLNELLPH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQIQRLQKELDAANSDLIRFACNEIPNT 121
           QREDAVNSLAYEAEARVRDPVYGCVGAIS+LQRQ+ RLQKELDAAN+DL  +  +     
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 122 GPSHVV-----------QHIPTLRPRAFDQYNTSGYYNQHLPAFNPMAYS--MPWNENSS 176
            P +VV           Q +P L P  +     S   NQ +P     +Y   +PWN   +
Sbjct: 123 APGNVVDLVFQPQPLPSQQLPPLNP-VYRLSGASPVMNQ-MPRGTGGSYGTFLPWN---N 182

[Close]

BLAST of Sed0002485 vs. ExPASy Swiss-Prot
Match: Q8L8Q3 (LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 SV=3)

HSP 1 Score: 186.8 bits (473), Expect = 2.1e-46
Identity = 85/111 (76.58%), Postives = 100/111 (90.09%), Query Frame = 0


Query: 4   SSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQR 63
           S+  NSPCAACKFLRRKC   C+FAPYFPPEEP KFANVH+IFGASNV+K+L+E+ PHQR
Sbjct: 33  SNYTNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQR 92

Query: 64  EDAVNSLAYEAEARVRDPVYGCVGAISFLQRQIQRLQKELDAANSDLIRFA 115
           EDAVNSLAYEAEAR++DPVYGCVGAIS LQRQ+ RLQ+EL+  N+DL+R+A
Sbjct: 93  EDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYA 143

[Close]

BLAST of Sed0002485 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.5e-44
Identity = 97/173 (56.07%), Postives = 118/173 (68.21%), Query Frame = 0


Query: 3   SSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQ 62
           +SSS NSPCAACKFLRRKC P C+FAPYFPP++PQKFANVHK+FGASNVTKLLNEL P Q
Sbjct: 2   ASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQ 61

Query: 63  REDAVNSLAYEAEARVRDPVYGCVGAISFLQRQIQRLQKELDAANSDLIRFACNEIPNTG 122
           REDAVNSLAYEA+ R+RDPVYGCVG IS LQ Q+++LQ +L  A S+L ++    +    
Sbjct: 62  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKY--QSLGILA 121

Query: 123 PSHVVQHIPTLRPRAFDQYNTSGYYNQHLPAFNPMAYSMPWNENSSGNNINGG 176
            +H    I  L   A D   T+   + H   F P        +  +GNN +GG
Sbjct: 122 ATHQSLGI-NLLAGAADGTATAVRDHYHHHQFFPREQMFGGLDVPAGNNYDGG 171

[Close]

BLAST of Sed0002485 vs. ExPASy Swiss-Prot
Match: Q32SG3 (LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.6e-41
Identity = 81/143 (56.64%), Postives = 100/143 (69.93%), Query Frame = 0


Query: 9   SPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVN 68
           SPCAACKFLRRKC P C+FAPYFPP+ PQKF +VH++FGASNVTKLLNEL P QREDAVN
Sbjct: 32  SPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPFQREDAVN 91

Query: 69  SLAYEAEARVRDPVYGCVGAISFLQRQIQRLQKELDAANSDLIRF-----ACNEIPNTGP 128
           SLAYEA+ R+RDPVYGCVG IS LQ  +++LQ++L  A  +L ++     A      TGP
Sbjct: 92  SLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASASTAPTGP 151

Query: 129 SHVVQHIPTLRPRAFDQYNTSGY 147
             + + I    P     +   G+
Sbjct: 152 QAMAEFIGNAMPNGAHNFINIGH 174

[Close]

BLAST of Sed0002485 vs. ExPASy Swiss-Prot
Match: A2WXT0 (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 PE=3 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 6.1e-41
Identity = 80/148 (54.05%), Postives = 102/148 (68.92%), Query Frame = 0


Query: 9   SPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVN 68
           SPCAACKFLRRKC P C+FAPYFPP+ PQKF +VH++FGASNVTKLLNEL P+QREDAVN
Sbjct: 37  SPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDAVN 96

Query: 69  SLAYEAEARVRDPVYGCVGAISFLQRQIQRLQKELDAANSDLIRF----------ACNEI 128
           SLAYEA+ R+RDPVYGCV  IS LQR +++LQ++L  A  +L ++          + +  
Sbjct: 97  SLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAAASASTG 156

Query: 129 PNTGPSHVVQHIPTLRPRAFDQYNTSGY 147
            N GP  + + I    P     +   G+
Sbjct: 157 TNNGPHSMAEFIGNAVPNGAQSFINVGH 184

[Close]

BLAST of Sed0002485 vs. ExPASy TrEMBL
Match: A0A6J1E272 (LOB domain-containing protein 25-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430134 PE=3 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 9.9e-87
Identity = 162/184 (88.04%), Postives = 169/184 (91.85%), Query Frame = 0


Query: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
           MASSSSYNSPCAACKFLRRKCM GCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP
Sbjct: 1   MASSSSYNSPCAACKFLRRKCMSGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60

Query: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQIQRLQKELDAANSDLIRFACNEIPN 120
           HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQ+QRLQKELDAAN+DLIR+ACNEIPN
Sbjct: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN 120

Query: 121 TGPSHVVQHIPTLRPRAFDQYNTS---GYYNQHLPAFNPMAYSMPWNENSSGNNINGGGG 180
            G SHVVQ  P  RPRA DQ++TS   GYYNQHLPAF PMAY +PWNENS GN+IN GGG
Sbjct: 121 AGVSHVVQPSPGARPRALDQFHTSSSTGYYNQHLPAF-PMAYPLPWNENSPGNDINEGGG 180

Query: 181 DGNI 182
           DGNI
Sbjct: 181 DGNI 183

[Close]

BLAST of Sed0002485 vs. ExPASy TrEMBL
Match: A0A6J1E5J8 (protein LATERAL ORGAN BOUNDARIES-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430134 PE=3 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 9.9e-87
Identity = 162/184 (88.04%), Postives = 169/184 (91.85%), Query Frame = 0


Query: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
           MASSSSYNSPCAACKFLRRKCM GCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP
Sbjct: 59  MASSSSYNSPCAACKFLRRKCMSGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 118

Query: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQIQRLQKELDAANSDLIRFACNEIPN 120
           HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQ+QRLQKELDAAN+DLIR+ACNEIPN
Sbjct: 119 HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN 178

Query: 121 TGPSHVVQHIPTLRPRAFDQYNTS---GYYNQHLPAFNPMAYSMPWNENSSGNNINGGGG 180
            G SHVVQ  P  RPRA DQ++TS   GYYNQHLPAF PMAY +PWNENS GN+IN GGG
Sbjct: 179 AGVSHVVQPSPGARPRALDQFHTSSSTGYYNQHLPAF-PMAYPLPWNENSPGNDINEGGG 238

Query: 181 DGNI 182
           DGNI
Sbjct: 239 DGNI 241

[Close]

BLAST of Sed0002485 vs. ExPASy TrEMBL
Match: A0A6J1JDL4 (LOB domain-containing protein 25-like OS=Cucurbita maxima OX=3661 GN=LOC111485830 PE=3 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.3e-86
Identity = 162/184 (88.04%), Postives = 169/184 (91.85%), Query Frame = 0


Query: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
           MASSSSYNSPCAACKFLRRKCM GCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP
Sbjct: 1   MASSSSYNSPCAACKFLRRKCMSGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60

Query: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQIQRLQKELDAANSDLIRFACNEIPN 120
           HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQ+QRLQKELDAAN+DLIR+ACNEIPN
Sbjct: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACNEIPN 120

Query: 121 TGPSHVVQHIPTLRPRAFDQYNTS---GYYNQHLPAFNPMAYSMPWNENSSGNNINGGGG 180
            G SHVVQ  P  RPRA DQY+TS   GYY+QHLPAF PMAY +PWNENS GN+IN GGG
Sbjct: 121 AGVSHVVQPSPGARPRALDQYHTSSSTGYYSQHLPAF-PMAYPLPWNENSPGNDINEGGG 180

Query: 181 DGNI 182
           DGNI
Sbjct: 181 DGNI 183

[Close]

BLAST of Sed0002485 vs. ExPASy TrEMBL
Match: A0A6J1F030 (protein LATERAL ORGAN BOUNDARIES-like OS=Cucurbita moschata OX=3662 GN=LOC111438177 PE=3 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 6.0e-84
Identity = 160/190 (84.21%), Postives = 165/190 (86.84%), Query Frame = 0


Query: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
           MASSS YNSPCAACKFLRRKCMP CIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP
Sbjct: 108 MASSSCYNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 167

Query: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQIQRLQKELDAANSDLIRFACNEIPN 120
           HQREDAVNSLAYEAEARVRDPVYGC+GAISFLQRQI RLQKELDAAN DLIR+ACNEIP+
Sbjct: 168 HQREDAVNSLAYEAEARVRDPVYGCIGAISFLQRQIHRLQKELDAANVDLIRYACNEIPD 227

Query: 121 TGPSHVVQHIPTLRPRAFDQYNT---------SGYYNQHLPAFNPMAYSMPWNENSSGNN 180
            G SHVVQ IP LRPRA DQY+T         SGYYNQH PAF PM Y +PWNENSSGNN
Sbjct: 228 GGASHVVQPIPDLRPRALDQYHTRILGNEGSSSGYYNQHPPAF-PMGYPLPWNENSSGNN 287

Query: 181 INGGGGDGNI 182
           IN GG D NI
Sbjct: 288 INEGGRDDNI 296

[Close]

BLAST of Sed0002485 vs. ExPASy TrEMBL
Match: A0A6J1HSS4 (protein LATERAL ORGAN BOUNDARIES-like OS=Cucurbita maxima OX=3661 GN=LOC111465894 PE=3 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 8.7e-83
Identity = 159/190 (83.68%), Postives = 164/190 (86.32%), Query Frame = 0


Query: 1   MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60
           MASSS YNSPCAACKFLRRKCMP CIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP
Sbjct: 1   MASSSCYNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLP 60

Query: 61  HQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQIQRLQKELDAANSDLIRFACNEIPN 120
           HQREDAVNSLAYEAEARVRDPVYGC+GAISFLQRQI RLQKELDAAN DLIR+A NEIP+
Sbjct: 61  HQREDAVNSLAYEAEARVRDPVYGCIGAISFLQRQIHRLQKELDAANVDLIRYAYNEIPD 120

Query: 121 TGPSHVVQHIPTLRPRAFDQYNT---------SGYYNQHLPAFNPMAYSMPWNENSSGNN 180
            G SHVVQ IP LRPRA DQY+T         SGYYNQH PAF PM Y +PWNENSSGNN
Sbjct: 121 GGASHVVQPIPALRPRALDQYHTRILGNEGSSSGYYNQHPPAF-PMGYPLPWNENSSGNN 180

Query: 181 INGGGGDGNI 182
           IN GG D NI
Sbjct: 181 INEGGRDDNI 189

[Close]

BLAST of Sed0002485 vs. TAIR 10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 224.2 bits (570), Expect = 8.6e-59
Identity = 120/187 (64.17%), Postives = 136/187 (72.73%), Query Frame = 0


Query: 2   ASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPH 61
           +SS+SYNSPCAACKFLRRKCMPGCIFAPYFPPEEP KFANVHKIFGASNVTKLLNELLPH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQIQRLQKELDAANSDLIRFACNEIPNT 121
           QREDAVNSLAYEAEARVRDPVYGCVGAIS+LQRQ+ RLQKELDAAN+DL  +  +     
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 122 GPSHVV-----------QHIPTLRPRAFDQYNTSGYYNQHLPAFNPMAYS--MPWNENSS 176
            P +VV           Q +P L P  +     S   NQ +P     +Y   +PWN   +
Sbjct: 123 APGNVVDLVFQPQPLPSQQLPPLNP-VYRLSGASPVMNQ-MPRGTGGSYGTFLPWN---N 182

[Close]

BLAST of Sed0002485 vs. TAIR 10
Match: AT5G63090.3 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 224.2 bits (570), Expect = 8.6e-59
Identity = 120/187 (64.17%), Postives = 136/187 (72.73%), Query Frame = 0


Query: 2   ASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPH 61
           +SS+SYNSPCAACKFLRRKCMPGCIFAPYFPPEEP KFANVHKIFGASNVTKLLNELLPH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQIQRLQKELDAANSDLIRFACNEIPNT 121
           QREDAVNSLAYEAEARVRDPVYGCVGAIS+LQRQ+ RLQKELDAAN+DL  +  +     
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 122 GPSHVV-----------QHIPTLRPRAFDQYNTSGYYNQHLPAFNPMAYS--MPWNENSS 176
            P +VV           Q +P L P  +     S   NQ +P     +Y   +PWN   +
Sbjct: 123 APGNVVDLVFQPQPLPSQQLPPLNP-VYRLSGASPVMNQ-MPRGTGGSYGTFLPWN---N 182

[Close]

BLAST of Sed0002485 vs. TAIR 10
Match: AT5G63090.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 224.2 bits (570), Expect = 8.6e-59
Identity = 120/187 (64.17%), Postives = 136/187 (72.73%), Query Frame = 0


Query: 2   ASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPH 61
           +SS+SYNSPCAACKFLRRKCMPGCIFAPYFPPEEP KFANVHKIFGASNVTKLLNELLPH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQIQRLQKELDAANSDLIRFACNEIPNT 121
           QREDAVNSLAYEAEARVRDPVYGCVGAIS+LQRQ+ RLQKELDAAN+DL  +  +     
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 122 GPSHVV-----------QHIPTLRPRAFDQYNTSGYYNQHLPAFNPMAYS--MPWNENSS 176
            P +VV           Q +P L P  +     S   NQ +P     +Y   +PWN   +
Sbjct: 123 APGNVVDLVFQPQPLPSQQLPPLNP-VYRLSGASPVMNQ-MPRGTGGSYGTFLPWN---N 182

[Close]

BLAST of Sed0002485 vs. TAIR 10
Match: AT5G63090.4 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 224.2 bits (570), Expect = 8.6e-59
Identity = 120/187 (64.17%), Postives = 136/187 (72.73%), Query Frame = 0


Query: 2   ASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPH 61
           +SS+SYNSPCAACKFLRRKCMPGCIFAPYFPPEEP KFANVHKIFGASNVTKLLNELLPH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQIQRLQKELDAANSDLIRFACNEIPNT 121
           QREDAVNSLAYEAEARVRDPVYGCVGAIS+LQRQ+ RLQKELDAAN+DL  +  +     
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 122 GPSHVV-----------QHIPTLRPRAFDQYNTSGYYNQHLPAFNPMAYS--MPWNENSS 176
            P +VV           Q +P L P  +     S   NQ +P     +Y   +PWN   +
Sbjct: 123 APGNVVDLVFQPQPLPSQQLPPLNP-VYRLSGASPVMNQ-MPRGTGGSYGTFLPWN---N 182

[Close]

BLAST of Sed0002485 vs. TAIR 10
Match: AT3G27650.1 (LOB domain-containing protein 25 )

HSP 1 Score: 186.8 bits (473), Expect = 1.5e-47
Identity = 85/111 (76.58%), Postives = 100/111 (90.09%), Query Frame = 0


Query: 4   SSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQR 63
           S+  NSPCAACKFLRRKC   C+FAPYFPPEEP KFANVH+IFGASNV+K+L+E+ PHQR
Sbjct: 33  SNYTNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQR 92

Query: 64  EDAVNSLAYEAEARVRDPVYGCVGAISFLQRQIQRLQKELDAANSDLIRFA 115
           EDAVNSLAYEAEAR++DPVYGCVGAIS LQRQ+ RLQ+EL+  N+DL+R+A
Sbjct: 93  EDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYA 143

The following BLAST results are available for this feature:

BLAST of Sed0002485 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023515750.1	7.0e-87	88.59	protein LATERAL ORGAN BOUNDARIES-like [Cucurbita pepo subsp. pepo]	[more]
XP_038880086.1	2.0e-86	88.17	protein LATERAL ORGAN BOUNDARIES-like [Benincasa hispida]	[more]
KAG6589428.1	2.0e-86	88.04	Protein LATERAL ORGAN BOUNDARIES, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_022922076.1	2.0e-86	88.04	LOB domain-containing protein 25-like isoform X2 [Cucurbita moschata] >XP_022922...	[more]
XP_022922073.1	2.0e-86	88.04	protein LATERAL ORGAN BOUNDARIES-like isoform X1 [Cucurbita moschata]	[more]

BLAST of Sed0002485 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FML4	1.2e-57	64.17	Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=...	[more]
Q8L8Q3	2.1e-46	76.58	LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 S...	[more]
O04479	1.5e-44	56.07	Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1	[more]
Q32SG3	1.6e-41	56.64	LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1	[more]
A2WXT0	6.1e-41	54.05	LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 P...	[more]

BLAST of Sed0002485 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E272	9.9e-87	88.04	LOB domain-containing protein 25-like isoform X2 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1E5J8	9.9e-87	88.04	protein LATERAL ORGAN BOUNDARIES-like isoform X1 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1JDL4	1.3e-86	88.04	LOB domain-containing protein 25-like OS=Cucurbita maxima OX=3661 GN=LOC11148583...	[more]
A0A6J1F030	6.0e-84	84.21	protein LATERAL ORGAN BOUNDARIES-like OS=Cucurbita moschata OX=3662 GN=LOC111438...	[more]
A0A6J1HSS4	8.7e-83	83.68	protein LATERAL ORGAN BOUNDARIES-like OS=Cucurbita maxima OX=3661 GN=LOC11146589...	[more]

BLAST of Sed0002485 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G63090.2	8.6e-59	64.17	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.3	8.6e-59	64.17	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.1	8.6e-59	64.17	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.4	8.6e-59	64.17	Lateral organ boundaries (LOB) domain family protein	[more]
AT3G27650.1	1.5e-47	76.58	LOB domain-containing protein 25	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 89..116
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 1..180
None	No IPR available	PANTHER	PTHR31301:SF82	ELONGATED PETIOLULE 1	coord: 1..180
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 10..107 e-value: 2.4E-42 score: 143.5
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 9..110 score: 28.031788

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002485.1	Sed0002485.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane