Sed0002477 (gene) Chayote v1

Overview


Name	Sed0002477
Type	gene
Organism	Sechium edule (Chayote v1)
Description	lys-63-specific deubiquitinase BRCC36-like
Location	LG06: 45132180 .. 45138425 (-)
RNA-Seq Expression	Sed0002477
Synteny	Sed0002477

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTGCGATCCGCTGCTGAAGGATCATCGAAACTCGGCGAAGTGAGTCTCCGCTTTGAAAAACTTCGATTCGAATCTCTCTTTTTTCCCTTTTGTGTTCTTCATTCAAATTCTTCACAGACAAAAAATCGAAGTTTCCAAAGTCAAGGCTGAAAACCGCGATCCAAAGATGTCCCTGACGGCCGTCAACATGTCCGAAGACGTTTGGTTTACTTGTCTCACTCATGCATTGTCCACCGAGACCGAAGAAATCATGGGCCTTCTTCTTGGCGATATCGAGGTCATTCTTTACATTTCTGCTCTGCAATTTGAAGGTCCTTCGTGTTTGTTTCAGCTCATTCTCGATTGTTTTGTGTAATCTGATGTGCGGTTTGCTTTAATTTGTGTTATTGGGTGTCTATTTGTTGGTTTGGATGCTTGTATTGGGTTTCTATTTGAAAAACAGGTTTAATTGATTGTTTTGGCAAATGGGGTTGTTGTAGTTTGCTTTAATTTGGGTTATTGGGTGTGTTTATTTGTTGGTTTGGCTTCTTGTATTGGATTTCTGTTTGAAAAATAGGTTTTATTGGTTTTTTTTTTTGGGAAATGGGGTTTCTGTAGTTTGAATTCTATGTTTTGGTGGTAATGTTTTGTGCTTCATTGGCTTAGTTAATTGATTCGTTGATCATGTTGTAAAATCTACATTTAGGAGTGGTGTTTATGGTACTCTCTATAGAATATTTGACTCTAAATGATATATGCTGTTACAGATGGACTTGGTTTGTTTTTCACAAAAGTTTGTGTGAATTTGTTGTTCTACTAGACATTGTTGTCATAATTATGGCCGTCAATAGAGGATTTAAGTTTTGAAATTTATCCCTTGAGTTTGAGCAGTTTCTTTTCATGGCATGGCTTATTTCTAAGCTTTAAGCTCTTTTCGTGCCTATGGTTTTTCTATCGGGTGCTATACTTGCATCTTGACTAGGTTTTTGTTAAATCAGTCATGTGTTCTGTTCTAACTATGGAATTTTGCAGCATTCGAAAAATGGCAGCGTAACTGCACTAATTTGGGGAGCATCGCCTCAGACACGGTCTGATAGAAGGAAGGATCGTGTGGAGACTCATCCTGAACAATTGGCTGCTGCATCTGCTCAAGCTGAGATATCCTTTGCTTCTTTTATCATTACGAAAATCTTCTAGTCTTTGCCTATTTATCGCAGTTCATTCTGATAAGTCCTCTGTTGTTCATATTTTTCTACTTTATCATTTAAAAAAAAAATATTGTGAAACTGATTTGACGAATGGAAAGATTTACCTCAAGAGTGATATTGCAGAGTTGAGCTGACTTTAAATACAGGTGTTAGCATTATGAAGTAGTATAAAGTAATAGGTTAACTATTCGAATACCAAAGGAATCTTTTGATTATGTATTTTTTTAGCAGTGATTAAACCTATATGGAATTCTAGGTTTATAAAGTAGTTTAAAACTTTAAAGTAATGAGGTCAACTATTCAATACCAAAGTTATCTTTTGATTATGTTTTTTTTTTCACTAGTGATTAAACTATATGAATTTTTTTTACTCAATATTGTTATACTTAATTTTATAGAACATAATGACAGCAACGACTGGGAGAACAACGAGAGTTATTGGATGGTACCATTCACATCCTCATATTACCGTGCTTCCTTCACATGTTGGTTAGTATTGACTTGTCTATGTTGTCCAATTGTGACCCATCTTGCTTCTGAAGTGTGATAATGCCAATTATGTAAACGGCTTTGCACTTCCATGAATTAGTTTTCAATCTTGTTCTCTTTTCGTATGTTTCAGCTGAGAATCAAGTCTCCGTTCAACCATATACCATCTAATATTTCGTTGGTATGAAAATGTTCTATTGGTGATCTGGGAACAGGTCTTCCTTGGAGTTTTGGGACTTTTAGCCTTTTTCTTTCAAAAGTTTCATATGAAAGGCTTTTGTTTCTTATAATTTGTTTCTAACTAAAACCTCTAGACAGAGCTTGTTTTTGGTGTCTGGGTGTTTCAAATAGAAAGCTGAAATTTCTTCTTACAAAATTGTTTGTTCTAATGATTTTGTCATGATAAAAAGACTCTGGAAAATTCTAGGAAACTTCACCCATGAAGCATGAACACTTCAAAATAGGGAGAGAATCTGTGTCGTGTCGGACACACGCTCGTTGAAACATTTCTTAGACGTGTTCTACATGCCATTTTAAGTGTCCTTTTTTAATCATCGGATACGCCATGGATGCATATTATAAATATATGTGGTCTTTTGAGTCCAAATATTAAAGGCTCAAACTCAAAATAATTAATGTTATAATTAACTAAATAATAAAAGGTTAAAGGAAAAGGCAAAAGAAAAACAGAACTGTCGCCTCTCTTATTTATCACAAAAAATCCAACCACCTTACTCTTCTTCATGAAAAAAATTCTTCTTCACCTTCTAAAATACTCGTTTGGGGCCACCTCCTATGCCACGCCTAACCGACGTACATTATAATTAACTTGACATTATATGCTTTTTAGTAGAGTACATTTAGTATAATGCTAAATTTACATATTTACAAAAAAAAAAGTAATGTATCCTCAATGTATTCGTGTCCTAGTTTCTTAGAAAATGTCATGACCGTATCTCGTGTCCGTGCCCATGTTTCATAGATTTCATATTTACTAAAATTTCTAAGAGTTAGCTGATTTAGTCAAATACTATTCTGCCGAAGAAAAGCTGTAATAGATATCCTTATACTTATATGGGATGATAACTGATCTTTCATGTCAAAGTATAAGTCCATCTTCCGAATTTCTCACGTTATGTGTATACTGTATGCCATAACTTTAACTATGGAGTTTCCTCGATTTATAATTTGGAAGTTTTTCTTTTTCTTCTTTTTTTTTTTGAACTTATTAATTAAAACAAAGAACTCTTCAATCATGCAAATCTTCCTTTCTGCAGATGTTCGAACTCAAGGGACATATCAGCTCCTTGATTCTGGGTTTATTGGGCTGATATTTTCCTGCTTTAGTGAAGATGCAAACAAGGTTTGTATAGTAGTATTTGCTTTGGAGGTTTATCCCTTTGCATGCTTGTTACTTATAATCAAACAATGTCAGGTTGGAAGAATTCAAGTTATTGCTTTTCAGTCCTCGGATGGGAAACAGAATCACCTCTCAAGACCTATTTCTTTATCTCCTGTATATCGAAATTCCGTGATTGATGTTGAATCTTCTTTGAGTTCATCTGATAATTTTTCAGCAAAAACGGGCTATGGACCAGGGGAGAGTCCTGAACAAGACACTGGTGATTCAACGATTGCCGGAGCTATGAAGGTACAAGTACAACATATGTGCATTACAAAGACACCTAAATCTGGATGTTAACATTCATATGACCTGCATAAGTTGAATGATGAGCGGGTCTTGCAAAAGTGTCAATATTCAGGCGAGCATCATGGTTAAGAGAGCATTGTTTTTTTATGGGGGGAAAATGGCGATTGTTGACCCTTAAAATATTAGGAGAAAATTTAATTGATTGATGCTTGATAAATTCTGCATTGATTTAAATTAGGAAATCTTATGCTGAAAAACAATAACTTAAAACACTTTTGAGGATCACTTTCAAGTATTTTACTAGGTTGACTTCTCCCTTTCTACATTTACTTCTGCCCTGACTGGTGGAAAAGCTGCATGCCCTAGTATTTTTGATGTTCCTCTATAGTTGACACTTTACTCTCCGATGAGATGCTGTTGCAAATATTATAGCCTATGAAGTTAAGGAATAATATTTAACTCTTTCAGCATAGGATACAAACTTCTAAGTATTATGCACTTGTATCTGGCAACCATTTGATCCATTTCTATGAAAAAAATGGGATTTCACCATCTAATGTGAGATCTTTTAGCCTGATATTTCTGTGCCATGAGCCATTACATGGATTAATTGTCTATTGGTTAATTGGAGTCACTTACCTCAGAATAAACCTACTGGTTTCTGTTTGTCATCAAAGGAGATATCTAACCAACTGTTCCATGGATTTCCATCTAATAATCCTAAGTTCAGGGAGTTCACTTTTGATAGAATTTCTTAGTGGGGTGATTTGGAGTTTTGCCCTTTTTCGCGTGTCTGACTTGTTTGGCAATGTTTGCAGGGTTCCGGGCGATCTCAAGAGTTGGGTTATTTCTTTGCTAATGCTGACACCAACTATCAAGGAAAAGAGAAAATGAGGGGGGACTATCTTACTAACAATGCAAATACTGGGATTAATGATATTGATCCAATGGACTTGACTGATAGTATGCAAGAAGCAATGCACCGTTCAAATATCGAAATGAGGTTTGTATGAAATGAAGATTTCTTGGTGCTATCCTCAATCGTCATACAGTTATCTAAGGATTGACTGCTTCAAACTGTGTACTCGGTACTCTTGACTTAGTTAATAACTTCTACAAAAGCAATAGCTCAACCGGTATTTGTGTGTGCCCCATGACTGTTGGGTTTGAATCACACATCCCCAATTGTTAATGAACTAAAAAAAAAAAAAAACTTGTTTAACTGCATTAAATAGGAGTCAGAAGTTGCAGTGCTATTATTTTGTTCTTCCCTGAATTAGTTCATTGTTGTCGTTTTTTCTCGAGCTGGCAGACTTTGGTTTTTAAATACACCTGATTATGAATTTGTTTTCTTTTGCTGCCAGTGCTGCTGAATTTTCGAGGAAAGAGATTCCTCTTCATGTTATGCTGACTGCATCCCTCATAAAGCTTGATGCACCATTAATGTCCTTTACAGATTTACAGCATGTTCTGTTTGAAGAGGAGAGATCAGCTTATAACCAAGCCATCTTAAATAATATGAAGTAATGAAATGATATCTCTTTCATTAATCATTTGGAGCATATTTCCTAATTTACAAGTGGTTTCATAATCAGTTTGTTTATTGTTATTGACCATGATCATTACTTTTGTTTCTCGTAGGGACGGCAAAGTGCACCCACTGACATTCATTCATCACACATCAACATATCAGGCTTCCATGTGCAAGTTAATCGAATATTGGTTAGGCTCATATGCTTCCCTCTATTAACCATGATTATTATTTATTTTCTTATATCCCCTAGTGTCTGGCCTAATTTGTGTACATTTTAATTATTTTCACAAGACATACCATCTAACCCCACAACATTTGGATTTCTATGAAATTTGTAGGAAATTAATACCTAGGTAGGTAGTCAACATGATTTAACCGACCACTTAGTTCCACCAAGGCTCCTCTTAACCATTAATTTGTGGTCTTTTGTTCTCCATGTGCCAAAAATGCACATTTAACTGGAATTGTTCTTATTTCCCTTTTGATTGCTTGCAGTCTTAGTCCTGCCATAAGTGCGCTCCAGGATCGCGTAAAAGAGAACGAAATTCGGGTATGCATTACGACTCCAAACACTTTCATTTGCATAGATTATTCCCTCTGAATGTATGAATTGGACTCAAGCGCAACAGTTTCTGCACATAATTTGTTGATCCCTTTGCGTTGATGTATTCAAATATTTACTTCATTATTTGGCGGGTCCAACTCGATTTAGAGGTTGATAACTTCTCTGTTAAAACAGCTAGCTTTGCTAGCTGAGGAAGCCAGGAATCTGGAAATTGAGGCTGCAAAAGCGAACGACTCAGCCCCAGGATCACCTTACCAAGTTACTCATGGATCTCGATCGAGTGCGTCAGCAACTCAAAGGGACTCGTATCCTTCAACCGCATCAGTTAGTTCGCGAAATGCAGGAAGCTCTATTCAGAGGAGTAGAAAGGGTTTGTGATGAATCTTGTGCTGATAACTTGTTTTCCTAGTTCCCGAAATCCTGTATTATATCGTTCGGGGTTTGTCGTGCATATAAACAATCCGAAGTATAGAAGGGGGGTCAAATGGCAGTCATTTAGTAGCTACCAAAATTACACCTTGTAGAACCGTCTAAAACTGGCTCTTGATCAAGTGTAATGCAGTTGAATCCACTTATTGGTTGGAAAATTAAGTTGCAAACTAAGATCAGTTTAGATCTGTATGTCAACGTGAATGTTCAGCACAAAATGCAAGAATGTAATGAGTTGAAGGGATATTGCTAGTCGTTTTGTTAAAGATTTGAGTATCAGTTTCTGTCTCTGTTTTGCTATCATTAGCAAGCTCTATGATCTCTTGGTCTGTGAGCCAATACCAAAATTTTGTGTTCTTAATTTATAAGATTGCGTTTTCCTTTTAGAT

mRNA sequence

CTTTGCGATCCGCTGCTGAAGGATCATCGAAACTCGGCGAAACAAAAAATCGAAGTTTCCAAAGTCAAGGCTGAAAACCGCGATCCAAAGATGTCCCTGACGGCCGTCAACATGTCCGAAGACGTTTGGTTTACTTGTCTCACTCATGCATTGTCCACCGAGACCGAAGAAATCATGGGCCTTCTTCTTGGCGATATCGAGCATTCGAAAAATGGCAGCGTAACTGCACTAATTTGGGGAGCATCGCCTCAGACACGGTCTGATAGAAGGAAGGATCGTGTGGAGACTCATCCTGAACAATTGGCTGCTGCATCTGCTCAAGCTGAGATAATGACAGCAACGACTGGGAGAACAACGAGAGTTATTGGATGGTACCATTCACATCCTCATATTACCGTGCTTCCTTCACATGTTGATGTTCGAACTCAAGGGACATATCAGCTCCTTGATTCTGGGTTTATTGGGCTGATATTTTCCTGCTTTAGTGAAGATGCAAACAAGGTTGGAAGAATTCAAGTTATTGCTTTTCAGTCCTCGGATGGGAAACAGAATCACCTCTCAAGACCTATTTCTTTATCTCCTGTATATCGAAATTCCGTGATTGATGTTGAATCTTCTTTGAGTTCATCTGATAATTTTTCAGCAAAAACGGGCTATGGACCAGGGGAGAGTCCTGAACAAGACACTGGTGATTCAACGATTGCCGGAGCTATGAAGGGTTCCGGGCGATCTCAAGAGTTGGGTTATTTCTTTGCTAATGCTGACACCAACTATCAAGGAAAAGAGAAAATGAGGGGGGACTATCTTACTAACAATGCAAATACTGGGATTAATGATATTGATCCAATGGACTTGACTGATAGTATGCAAGAAGCAATGCACCGTTCAAATATCGAAATGAGTGCTGCTGAATTTTCGAGGAAAGAGATTCCTCTTCATGTTATGCTGACTGCATCCCTCATAAAGCTTGATGCACCATTAATGTCCTTTACAGATTTACAGCATGTTCTGTTTGAAGAGGAGAGATCAGCTTATAACCAAGCCATCTTAAATAATATGAAGGACGGCAAAGTGCACCCACTGACATTCATTCATCACACATCAACATATCAGGCTTCCATGTGCAAGTTAATCGAATATTGTCTTAGTCCTGCCATAAGTGCGCTCCAGGATCGCGTAAAAGAGAACGAAATTCGGCTAGCTTTGCTAGCTGAGGAAGCCAGGAATCTGGAAATTGAGGCTGCAAAAGCGAACGACTCAGCCCCAGGATCACCTTACCAAGTTACTCATGGATCTCGATCGAGTGCGTCAGCAACTCAAAGGGACTCGTATCCTTCAACCGCATCAGTTAGTTCGCGAAATGCAGGAAGCTCTATTCAGAGGAGTAGAAAGGGTTTGTGATGAATCTTGTGCTGATAACTTGTTTTCCTAGTTCCCGAAATCCTGTATTATATCGTTCGGGGTTTGTCGTGCATATAAACAATCCGAAGTATAGAAGGGGGGTCAAATGGCAGTCATTTAGTAGCTACCAAAATTACACCTTGTAGAACCGTCTAAAACTGGCTCTTGATCAAGTGTAATGCAGTTGAATCCACTTATTGGTTGGAAAATTAAGTTGCAAACTAAGATCAGTTTAGATCTGTATGTCAACGTGAATGTTCAGCACAAAATGCAAGAATGTAATGAGTTGAAGGGATATTGCTAGTCGTTTTGTTAAAGATTTGAGTATCAGTTTCTGTCTCTGTTTTGCTATCATTAGCAAGCTCTATGATCTCTTGGTCTGTGAGCCAATACCAAAATTTTGTGTTCTTAATTTATAAGATTGCGTTTTCCTTTTAGAT

Coding sequence (CDS)

ATGTCCCTGACGGCCGTCAACATGTCCGAAGACGTTTGGTTTACTTGTCTCACTCATGCATTGTCCACCGAGACCGAAGAAATCATGGGCCTTCTTCTTGGCGATATCGAGCATTCGAAAAATGGCAGCGTAACTGCACTAATTTGGGGAGCATCGCCTCAGACACGGTCTGATAGAAGGAAGGATCGTGTGGAGACTCATCCTGAACAATTGGCTGCTGCATCTGCTCAAGCTGAGATAATGACAGCAACGACTGGGAGAACAACGAGAGTTATTGGATGGTACCATTCACATCCTCATATTACCGTGCTTCCTTCACATGTTGATGTTCGAACTCAAGGGACATATCAGCTCCTTGATTCTGGGTTTATTGGGCTGATATTTTCCTGCTTTAGTGAAGATGCAAACAAGGTTGGAAGAATTCAAGTTATTGCTTTTCAGTCCTCGGATGGGAAACAGAATCACCTCTCAAGACCTATTTCTTTATCTCCTGTATATCGAAATTCCGTGATTGATGTTGAATCTTCTTTGAGTTCATCTGATAATTTTTCAGCAAAAACGGGCTATGGACCAGGGGAGAGTCCTGAACAAGACACTGGTGATTCAACGATTGCCGGAGCTATGAAGGGTTCCGGGCGATCTCAAGAGTTGGGTTATTTCTTTGCTAATGCTGACACCAACTATCAAGGAAAAGAGAAAATGAGGGGGGACTATCTTACTAACAATGCAAATACTGGGATTAATGATATTGATCCAATGGACTTGACTGATAGTATGCAAGAAGCAATGCACCGTTCAAATATCGAAATGAGTGCTGCTGAATTTTCGAGGAAAGAGATTCCTCTTCATGTTATGCTGACTGCATCCCTCATAAAGCTTGATGCACCATTAATGTCCTTTACAGATTTACAGCATGTTCTGTTTGAAGAGGAGAGATCAGCTTATAACCAAGCCATCTTAAATAATATGAAGGACGGCAAAGTGCACCCACTGACATTCATTCATCACACATCAACATATCAGGCTTCCATGTGCAAGTTAATCGAATATTGTCTTAGTCCTGCCATAAGTGCGCTCCAGGATCGCGTAAAAGAGAACGAAATTCGGCTAGCTTTGCTAGCTGAGGAAGCCAGGAATCTGGAAATTGAGGCTGCAAAAGCGAACGACTCAGCCCCAGGATCACCTTACCAAGTTACTCATGGATCTCGATCGAGTGCGTCAGCAACTCAAAGGGACTCGTATCCTTCAACCGCATCAGTTAGTTCGCGAAATGCAGGAAGCTCTATTCAGAGGAGTAGAAAGGGTTTGTGA

Protein sequence

MSLTAVNMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAEIMTATTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLDSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPVYRNSVIDVESSLSSSDNFSAKTGYGPGESPEQDTGDSTIAGAMKGSGRSQELGYFFANADTNYQGKEKMRGDYLTNNANTGINDIDPMDLTDSMQEAMHRSNIEMSAAEFSRKEIPLHVMLTASLIKLDAPLMSFTDLQHVLFEEERSAYNQAILNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISALQDRVKENEIRLALLAEEARNLEIEAAKANDSAPGSPYQVTHGSRSSASATQRDSYPSTASVSSRNAGSSIQRSRKGL

Homology

[Close]

BLAST of Sed0002477 vs. NCBI nr
Match: XP_038897822.1 (lys-63-specific deubiquitinase BRCC36-like isoform X2 [Benincasa hispida])

HSP 1 Score: 769.6 bits (1986), Expect = 1.4e-218
Identity = 396/436 (90.83%), Postives = 415/436 (95.18%), Query Frame = 0


Query: 1   MSLTAVNMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR 60
           MSLTAV MSED+WFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR
Sbjct: 1   MSLTAVKMSEDIWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR 60

Query: 61  KDRVETHPEQLAAASAQAEIMTATTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD 120
           KDRVETHPEQLAAASAQAE MTA TGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD
Sbjct: 61  KDRVETHPEQLAAASAQAERMTAMTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD 120

Query: 121 SGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPVYRNSVIDVESSLSSS 180
           SGFIGLIFSCFSEDANKVGRIQVIAFQS DGKQNHLSRPISLSPVYRNSVIDVESSLSSS
Sbjct: 121 SGFIGLIFSCFSEDANKVGRIQVIAFQSFDGKQNHLSRPISLSPVYRNSVIDVESSLSSS 180

Query: 181 DNFSAKTGYGPGESPEQDTGDSTIAGAMKGSGRSQELGYFFANADTNYQGKEKMRGDYLT 240
           +N SA  GYGPGE+PEQDTG+S +AGA+KG+GRS ELGYFFANADTNYQGKEK+ G YLT
Sbjct: 181 ENLSANVGYGPGENPEQDTGNSVVAGALKGTGRSSELGYFFANADTNYQGKEKISGSYLT 240

Query: 241 NNANTGINDIDPMDLTDSMQEAMHRSNIEMSAAEFSRKEIPLHVMLTASLIKLDAPLMSF 300
           NN N+GI DIDPMDL++SMQEAMHRSNIEMSAAEFSRKEIPLHVM TASLIKLD+PLMSF
Sbjct: 241 NNTNSGITDIDPMDLSESMQEAMHRSNIEMSAAEFSRKEIPLHVMPTASLIKLDSPLMSF 300

Query: 301 TDLQHVLFEEERSAYNQAILNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISALQ 360
           TDLQHVLFEEERSAYNQAI NNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISALQ
Sbjct: 301 TDLQHVLFEEERSAYNQAISNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISALQ 360

Query: 361 DRVKENEIRLALLAEEARNLEIEAAKANDSAPGSPYQVTHGSRSSASATQRDSYPSTASV 420
           DRVKENEIRLALLAEEAR+LEIEAAKAN+S PGSP+QVTHGSR+SAS T RD YPSTASV
Sbjct: 361 DRVKENEIRLALLAEEARSLEIEAAKANESGPGSPHQVTHGSRASASPTLRDLYPSTASV 420

Query: 421 SSRNAGSSIQRSRKGL 437
            +R+AGSS+ RSRKGL
Sbjct: 421 GARSAGSSMNRSRKGL 436

[Close]

BLAST of Sed0002477 vs. NCBI nr
Match: XP_004152213.1 (lys-63-specific deubiquitinase BRCC36 isoform X1 [Cucumis sativus] >KGN52872.1 hypothetical protein Csa_015166 [Cucumis sativus])

HSP 1 Score: 769.2 bits (1985), Expect = 1.9e-218
Identity = 397/436 (91.06%), Postives = 412/436 (94.50%), Query Frame = 0


Query: 1   MSLTAVNMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR 60
           MSLTAV MSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR
Sbjct: 1   MSLTAVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR 60

Query: 61  KDRVETHPEQLAAASAQAEIMTATTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD 120
           KDRVETHPEQLAAASAQAE MTA TGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD
Sbjct: 61  KDRVETHPEQLAAASAQAERMTAMTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD 120

Query: 121 SGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPVYRNSVIDVESSLSSS 180
           SGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPVYRNSVIDVESSLSSS
Sbjct: 121 SGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPVYRNSVIDVESSLSSS 180

Query: 181 DNFSAKTGYGPGESPEQDTGDSTIAGAMKGSGRSQELGYFFANADTNYQGKEKMRGDYLT 240
           DN S   GYGPGE+PEQDTGDS IAGA+KG+GRS ELGYFFANADTNYQGKEK+ G YL 
Sbjct: 181 DNVSGNVGYGPGENPEQDTGDSMIAGALKGTGRSSELGYFFANADTNYQGKEKIGGSYLI 240

Query: 241 NNANTGINDIDPMDLTDSMQEAMHRSNIEMSAAEFSRKEIPLHVMLTASLIKLDAPLMSF 300
           NN N+GI DIDPMDL++SMQEAMHRSNIEMSAAEFSRKEIPLHVM TASLIKLD+PL SF
Sbjct: 241 NNTNSGITDIDPMDLSESMQEAMHRSNIEMSAAEFSRKEIPLHVMPTASLIKLDSPLTSF 300

Query: 301 TDLQHVLFEEERSAYNQAILNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISALQ 360
           TDLQHVLFEEERSAYNQAI NNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISALQ
Sbjct: 301 TDLQHVLFEEERSAYNQAISNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISALQ 360

Query: 361 DRVKENEIRLALLAEEARNLEIEAAKANDSAPGSPYQVTHGSRSSASATQRDSYPSTASV 420
           DRVKENEIRLALLAEEARNLE+EAAKAN+S PGSP+QVTHGSR+SAS T RD YPSTASV
Sbjct: 361 DRVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQVTHGSRASASPTHRDLYPSTASV 420

Query: 421 SSRNAGSSIQRSRKGL 437
            +R+ GSS+ RSRKGL
Sbjct: 421 GARSGGSSMYRSRKGL 436

[Close]

BLAST of Sed0002477 vs. NCBI nr
Match: XP_008454260.1 (PREDICTED: lys-63-specific deubiquitinase BRCC36 isoform X1 [Cucumis melo])

HSP 1 Score: 766.9 bits (1979), Expect = 9.2e-218
Identity = 396/436 (90.83%), Postives = 411/436 (94.27%), Query Frame = 0


Query: 1   MSLTAVNMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR 60
           MSLTAV MSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR
Sbjct: 1   MSLTAVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR 60

Query: 61  KDRVETHPEQLAAASAQAEIMTATTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD 120
           KDRVETHPEQLAAASAQAE MTA TGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD
Sbjct: 61  KDRVETHPEQLAAASAQAERMTAMTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD 120

Query: 121 SGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPVYRNSVIDVESSLSSS 180
           SGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPVYRNSVIDVESSLSSS
Sbjct: 121 SGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPVYRNSVIDVESSLSSS 180

Query: 181 DNFSAKTGYGPGESPEQDTGDSTIAGAMKGSGRSQELGYFFANADTNYQGKEKMRGDYLT 240
           DN S   GYGPGE+PEQDTGDS IAGA+KG+GRS ELGYFFANADTNYQGKEK+ G Y  
Sbjct: 181 DNVSGNVGYGPGENPEQDTGDSMIAGALKGTGRSSELGYFFANADTNYQGKEKIGGSYRI 240

Query: 241 NNANTGINDIDPMDLTDSMQEAMHRSNIEMSAAEFSRKEIPLHVMLTASLIKLDAPLMSF 300
           NN N+GI DIDPMDL++SMQEAMHRSNIEMSAAEFSRKEIPLHVM TASLIKLD+PL SF
Sbjct: 241 NNTNSGITDIDPMDLSESMQEAMHRSNIEMSAAEFSRKEIPLHVMPTASLIKLDSPLTSF 300

Query: 301 TDLQHVLFEEERSAYNQAILNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISALQ 360
           TDLQHVLFEEERSAYNQAI NNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISALQ
Sbjct: 301 TDLQHVLFEEERSAYNQAISNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISALQ 360

Query: 361 DRVKENEIRLALLAEEARNLEIEAAKANDSAPGSPYQVTHGSRSSASATQRDSYPSTASV 420
           DRVKENEIRLALLAEEARNLE+EAAKAN+S PGSP+QVTHGSR+SAS T RD YPSTASV
Sbjct: 361 DRVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQVTHGSRASASPTHRDLYPSTASV 420

Query: 421 SSRNAGSSIQRSRKGL 437
            +R+ GSS+ RSRKGL
Sbjct: 421 GARSGGSSMYRSRKGL 436

[Close]

BLAST of Sed0002477 vs. NCBI nr
Match: XP_038897814.1 (lys-63-specific deubiquitinase BRCC36-like isoform X1 [Benincasa hispida])

HSP 1 Score: 764.6 bits (1973), Expect = 4.6e-217
Identity = 396/438 (90.41%), Postives = 415/438 (94.75%), Query Frame = 0


Query: 1   MSLTAVNMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR 60
           MSLTAV MSED+WFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR
Sbjct: 1   MSLTAVKMSEDIWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR 60

Query: 61  KDRVETHPEQLAAASAQAEIMTATTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD 120
           KDRVETHPEQLAAASAQAE MTA TGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD
Sbjct: 61  KDRVETHPEQLAAASAQAERMTAMTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD 120

Query: 121 SGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPVYRNSVIDVESSLSSS 180
           SGFIGLIFSCFSEDANKVGRIQVIAFQS DGKQNHLSRPISLSPVYRNSVIDVESSLSSS
Sbjct: 121 SGFIGLIFSCFSEDANKVGRIQVIAFQSFDGKQNHLSRPISLSPVYRNSVIDVESSLSSS 180

Query: 181 DNFSAKTGYGPGESPEQDTGDSTIAGAMK--GSGRSQELGYFFANADTNYQGKEKMRGDY 240
           +N SA  GYGPGE+PEQDTG+S +AGA+K  G+GRS ELGYFFANADTNYQGKEK+ G Y
Sbjct: 181 ENLSANVGYGPGENPEQDTGNSVVAGALKDSGTGRSSELGYFFANADTNYQGKEKISGSY 240

Query: 241 LTNNANTGINDIDPMDLTDSMQEAMHRSNIEMSAAEFSRKEIPLHVMLTASLIKLDAPLM 300
           LTNN N+GI DIDPMDL++SMQEAMHRSNIEMSAAEFSRKEIPLHVM TASLIKLD+PLM
Sbjct: 241 LTNNTNSGITDIDPMDLSESMQEAMHRSNIEMSAAEFSRKEIPLHVMPTASLIKLDSPLM 300

Query: 301 SFTDLQHVLFEEERSAYNQAILNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISA 360
           SFTDLQHVLFEEERSAYNQAI NNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISA
Sbjct: 301 SFTDLQHVLFEEERSAYNQAISNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISA 360

Query: 361 LQDRVKENEIRLALLAEEARNLEIEAAKANDSAPGSPYQVTHGSRSSASATQRDSYPSTA 420
           LQDRVKENEIRLALLAEEAR+LEIEAAKAN+S PGSP+QVTHGSR+SAS T RD YPSTA
Sbjct: 361 LQDRVKENEIRLALLAEEARSLEIEAAKANESGPGSPHQVTHGSRASASPTLRDLYPSTA 420

Query: 421 SVSSRNAGSSIQRSRKGL 437
           SV +R+AGSS+ RSRKGL
Sbjct: 421 SVGARSAGSSMNRSRKGL 438

[Close]

BLAST of Sed0002477 vs. NCBI nr
Match: XP_023525485.1 (lys-63-specific deubiquitinase BRCC36-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 762.7 bits (1968), Expect = 1.7e-216
Identity = 395/436 (90.60%), Postives = 412/436 (94.50%), Query Frame = 0


Query: 1   MSLTAVNMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR 60
           MSLTAV MSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR
Sbjct: 1   MSLTAVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR 60

Query: 61  KDRVETHPEQLAAASAQAEIMTATTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD 120
           KDRVETHPEQLAAASAQA+ MT  TGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD
Sbjct: 61  KDRVETHPEQLAAASAQADRMTTMTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD 120

Query: 121 SGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPVYRNSVIDVESSLSSS 180
           SGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSP+YRNSVIDVESSLSSS
Sbjct: 121 SGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPMYRNSVIDVESSLSSS 180

Query: 181 DNFSAKTGYGPGESPEQDTGDSTIAGAMKGSGRSQELGYFFANADTNYQGKEKMRGDYLT 240
           DN SAK G GPGESPEQDTGDS +AGAMKGSGRS ELGYFFANADTNYQGKEKM G YLT
Sbjct: 181 DNLSAKVG-GPGESPEQDTGDSMVAGAMKGSGRSSELGYFFANADTNYQGKEKMGGSYLT 240

Query: 241 NNANTGINDIDPMDLTDSMQEAMHRSNIEMSAAEFSRKEIPLHVMLTASLIKLDAPLMSF 300
           +N N+G  DIDPMDLT+SMQEAMHRSNIEMSAAEFSRKEIPLHVM +ASLIKLD+PLMSF
Sbjct: 241 SNTNSGTTDIDPMDLTESMQEAMHRSNIEMSAAEFSRKEIPLHVMPSASLIKLDSPLMSF 300

Query: 301 TDLQHVLFEEERSAYNQAILNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISALQ 360
           TDLQ+VLFEEERSAYNQAILNNMKDGK HPLTFIHHTSTYQASMCKLIEYCLSPAISALQ
Sbjct: 301 TDLQNVLFEEERSAYNQAILNNMKDGKAHPLTFIHHTSTYQASMCKLIEYCLSPAISALQ 360

Query: 361 DRVKENEIRLALLAEEARNLEIEAAKANDSAPGSPYQVTHGSRSSASATQRDSYPSTASV 420
           DR+KENEIRLALLAEEARNLE+EA K+N+S PGSP+QVTHGSR+SAS T RDSY STASV
Sbjct: 361 DRLKENEIRLALLAEEARNLELEAGKSNESVPGSPHQVTHGSRASASTTHRDSYASTASV 420

Query: 421 SSRNAGSSIQRSRKGL 437
            +R AGSS+ RSRKGL
Sbjct: 421 GARTAGSSVHRSRKGL 435

[Close]

BLAST of Sed0002477 vs. ExPASy Swiss-Prot
Match: B5X8M4 (Lys-63-specific deubiquitinase BRCC36 OS=Salmo salar OX=8030 GN=brcc3 PE=2 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 2.1e-39
Identity = 85/182 (46.70%), Postives = 121/182 (66.48%), Query Frame = 0


Query: 1   MSLTAVNMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR 60
           M+++AV++  D +  C+ HALSTE EE+MGL +G+++ ++   + ++I       RSD+R
Sbjct: 1   MAVSAVHLESDAFLVCMNHALSTEKEEVMGLCIGEVDTNRIVHIHSVI----ILRRSDKR 60

Query: 61  KDRVETHPEQLAAASAQAEIMTATTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD 120
           KDRVE  PEQL++A+ +AE +   TGR  RV+GWYHSHPHITV PSHVDVRTQ  YQ++D
Sbjct: 61  KDRVEISPEQLSSAATEAERLAEMTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMD 120

Query: 121 SGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQ----NHLSRPISLSPVYRNSVIDVES 178
            GF+GLIFSCF ED N K GR+    FQS   ++      +  PI + P      + +ES
Sbjct: 121 QGFVGLIFSCFIEDKNTKTGRVLYTCFQSVQAQKGSEYERIEIPIHVVPHEAIGKVCLES 178

[Close]

BLAST of Sed0002477 vs. ExPASy Swiss-Prot
Match: Q4VA72 (Lys-63-specific deubiquitinase BRCC36 OS=Xenopus tropicalis OX=8364 GN=brcc3 PE=2 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 4.7e-39
Identity = 82/155 (52.90%), Postives = 110/155 (70.97%), Query Frame = 0


Query: 1   MSLTAVNMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR 60
           M++ AV++  D +  C+TH+LSTE EE+MGL +G+++  K   + ++I       RSD+R
Sbjct: 1   MAVQAVHIQGDAFLVCVTHSLSTEREEVMGLCIGEVDTQKVVHIHSVI----ILRRSDKR 60

Query: 61  KDRVETHPEQLAAASAQAEIMTATTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD 120
           KDRVE  PEQL+AA+ +A+ +   TGR  RV+GWYHSHPHITV PSHVDVRTQ  YQ++D
Sbjct: 61  KDRVEISPEQLSAATTEADRLAEITGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMD 120

Query: 121 SGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN 155
            GF+GLIFSCF ED N K GRI    FQS   +++
Sbjct: 121 VGFVGLIFSCFIEDKNTKTGRILYTCFQSVQAQKS 151

[Close]

BLAST of Sed0002477 vs. ExPASy Swiss-Prot
Match: Q66GV6 (Lys-63-specific deubiquitinase BRCC36 OS=Xenopus laevis OX=8355 GN=brcc3 PE=2 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 8.0e-39
Identity = 82/155 (52.90%), Postives = 110/155 (70.97%), Query Frame = 0


Query: 1   MSLTAVNMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR 60
           M++ AV++  D +  C+TH+LSTE EE+MGL +G+++  K   + ++I       RSD+R
Sbjct: 1   MAVQAVHIQGDAFLVCVTHSLSTEREEVMGLCIGEVDTQKLVHIHSVI----ILRRSDKR 60

Query: 61  KDRVETHPEQLAAASAQAEIMTATTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD 120
           KDRVE  PEQL+AA+ +A+ +   TGR  RV+GWYHSHPHITV PSHVDVRTQ  YQ++D
Sbjct: 61  KDRVEISPEQLSAATIEADRLADITGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMD 120

Query: 121 SGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN 155
            GF+GLIFSCF ED N K GRI    FQS   +++
Sbjct: 121 VGFVGLIFSCFIEDKNTKTGRILYTCFQSVQAQKS 151

[Close]

BLAST of Sed0002477 vs. ExPASy Swiss-Prot
Match: Q5R9L6 (Lys-63-specific deubiquitinase BRCC36 OS=Pongo abelii OX=9601 GN=BRCC3 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.4e-38
Identity = 88/191 (46.07%), Postives = 113/191 (59.16%), Query Frame = 0


Query: 2   SLTAVNMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQT------ 61
           ++ AV++  D +  CL HALSTE EE+MGL +G++             G   +T      
Sbjct: 8   AVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFAYTGTEMRTVAEKVD 67

Query: 62  --------------RSDRRKDRVETHPEQLAAASAQAEIMTATTGRTTRVIGWYHSHPHI 121
                         RSD+RKDRVE  PEQL+AAS +AE +   TGR  RV+GWYHSHPHI
Sbjct: 68  AVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHI 127

Query: 122 TVLPSHVDVRTQGTYQLLDSGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDG-KQNHLSRP 171
           TV PSHVDVRTQ  YQ++D GF+GLIFSCF ED N K GR+    FQS    K + L+  
Sbjct: 128 TVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSDLTHL 187

[Close]

BLAST of Sed0002477 vs. ExPASy Swiss-Prot
Match: P46737 (Lys-63-specific deubiquitinase BRCC36 OS=Mus musculus OX=10090 GN=Brcc3 PE=1 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 5.2e-38
Identity = 88/201 (43.78%), Postives = 116/201 (57.71%), Query Frame = 0


Query: 2   SLTAVNMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQT------ 61
           ++ AV++  D +  CL HALSTE EE+MGL +G++             G   +T      
Sbjct: 8   AVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDIRSDSKFTYTGTEMRTVQEKMD 67

Query: 62  --------------RSDRRKDRVETHPEQLAAASAQAEIMTATTGRTTRVIGWYHSHPHI 121
                         RSD+RKDRVE  PEQL+AAS +AE +   TGR  RV+GWYHSHPHI
Sbjct: 68  TIRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHI 127

Query: 122 TVLPSHVDVRTQGTYQLLDSGFIGLIFSCFSEDAN-KVGRIQVIAFQSSDGKQN----HL 178
           TV PSHVDVRTQ  YQ++D GF+GLIFSCF ED N K GR+    FQS   +++     +
Sbjct: 128 TVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYERI 187

[Close]

BLAST of Sed0002477 vs. ExPASy TrEMBL
Match: A0A0A0KWR1 (MPN domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G004830 PE=3 SV=1)

HSP 1 Score: 769.2 bits (1985), Expect = 9.0e-219
Identity = 397/436 (91.06%), Postives = 412/436 (94.50%), Query Frame = 0


Query: 1   MSLTAVNMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR 60
           MSLTAV MSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR
Sbjct: 1   MSLTAVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR 60

Query: 61  KDRVETHPEQLAAASAQAEIMTATTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD 120
           KDRVETHPEQLAAASAQAE MTA TGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD
Sbjct: 61  KDRVETHPEQLAAASAQAERMTAMTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD 120

Query: 121 SGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPVYRNSVIDVESSLSSS 180
           SGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPVYRNSVIDVESSLSSS
Sbjct: 121 SGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPVYRNSVIDVESSLSSS 180

Query: 181 DNFSAKTGYGPGESPEQDTGDSTIAGAMKGSGRSQELGYFFANADTNYQGKEKMRGDYLT 240
           DN S   GYGPGE+PEQDTGDS IAGA+KG+GRS ELGYFFANADTNYQGKEK+ G YL 
Sbjct: 181 DNVSGNVGYGPGENPEQDTGDSMIAGALKGTGRSSELGYFFANADTNYQGKEKIGGSYLI 240

Query: 241 NNANTGINDIDPMDLTDSMQEAMHRSNIEMSAAEFSRKEIPLHVMLTASLIKLDAPLMSF 300
           NN N+GI DIDPMDL++SMQEAMHRSNIEMSAAEFSRKEIPLHVM TASLIKLD+PL SF
Sbjct: 241 NNTNSGITDIDPMDLSESMQEAMHRSNIEMSAAEFSRKEIPLHVMPTASLIKLDSPLTSF 300

Query: 301 TDLQHVLFEEERSAYNQAILNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISALQ 360
           TDLQHVLFEEERSAYNQAI NNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISALQ
Sbjct: 301 TDLQHVLFEEERSAYNQAISNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISALQ 360

Query: 361 DRVKENEIRLALLAEEARNLEIEAAKANDSAPGSPYQVTHGSRSSASATQRDSYPSTASV 420
           DRVKENEIRLALLAEEARNLE+EAAKAN+S PGSP+QVTHGSR+SAS T RD YPSTASV
Sbjct: 361 DRVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQVTHGSRASASPTHRDLYPSTASV 420

Query: 421 SSRNAGSSIQRSRKGL 437
            +R+ GSS+ RSRKGL
Sbjct: 421 GARSGGSSMYRSRKGL 436

[Close]

BLAST of Sed0002477 vs. ExPASy TrEMBL
Match: A0A1S3BY68 (lys-63-specific deubiquitinase BRCC36 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494717 PE=3 SV=1)

HSP 1 Score: 766.9 bits (1979), Expect = 4.5e-218
Identity = 396/436 (90.83%), Postives = 411/436 (94.27%), Query Frame = 0


Query: 1   MSLTAVNMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR 60
           MSLTAV MSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR
Sbjct: 1   MSLTAVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR 60

Query: 61  KDRVETHPEQLAAASAQAEIMTATTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD 120
           KDRVETHPEQLAAASAQAE MTA TGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD
Sbjct: 61  KDRVETHPEQLAAASAQAERMTAMTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD 120

Query: 121 SGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPVYRNSVIDVESSLSSS 180
           SGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPVYRNSVIDVESSLSSS
Sbjct: 121 SGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPVYRNSVIDVESSLSSS 180

Query: 181 DNFSAKTGYGPGESPEQDTGDSTIAGAMKGSGRSQELGYFFANADTNYQGKEKMRGDYLT 240
           DN S   GYGPGE+PEQDTGDS IAGA+KG+GRS ELGYFFANADTNYQGKEK+ G Y  
Sbjct: 181 DNVSGNVGYGPGENPEQDTGDSMIAGALKGTGRSSELGYFFANADTNYQGKEKIGGSYRI 240

Query: 241 NNANTGINDIDPMDLTDSMQEAMHRSNIEMSAAEFSRKEIPLHVMLTASLIKLDAPLMSF 300
           NN N+GI DIDPMDL++SMQEAMHRSNIEMSAAEFSRKEIPLHVM TASLIKLD+PL SF
Sbjct: 241 NNTNSGITDIDPMDLSESMQEAMHRSNIEMSAAEFSRKEIPLHVMPTASLIKLDSPLTSF 300

Query: 301 TDLQHVLFEEERSAYNQAILNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISALQ 360
           TDLQHVLFEEERSAYNQAI NNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISALQ
Sbjct: 301 TDLQHVLFEEERSAYNQAISNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISALQ 360

Query: 361 DRVKENEIRLALLAEEARNLEIEAAKANDSAPGSPYQVTHGSRSSASATQRDSYPSTASV 420
           DRVKENEIRLALLAEEARNLE+EAAKAN+S PGSP+QVTHGSR+SAS T RD YPSTASV
Sbjct: 361 DRVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQVTHGSRASASPTHRDLYPSTASV 420

Query: 421 SSRNAGSSIQRSRKGL 437
            +R+ GSS+ RSRKGL
Sbjct: 421 GARSGGSSMYRSRKGL 436

[Close]

BLAST of Sed0002477 vs. ExPASy TrEMBL
Match: A0A6J1G9J9 (lys-63-specific deubiquitinase BRCC36-like OS=Cucurbita moschata OX=3662 GN=LOC111452197 PE=3 SV=1)

HSP 1 Score: 761.9 bits (1966), Expect = 1.4e-216
Identity = 394/436 (90.37%), Postives = 412/436 (94.50%), Query Frame = 0


Query: 1   MSLTAVNMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR 60
           MSLTAV MSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR
Sbjct: 1   MSLTAVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR 60

Query: 61  KDRVETHPEQLAAASAQAEIMTATTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD 120
           KDRVETHPEQLAAASAQA+ MT  TGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD
Sbjct: 61  KDRVETHPEQLAAASAQADRMTTMTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD 120

Query: 121 SGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPVYRNSVIDVESSLSSS 180
           SGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSP+YRNSVIDVESSLSSS
Sbjct: 121 SGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPMYRNSVIDVESSLSSS 180

Query: 181 DNFSAKTGYGPGESPEQDTGDSTIAGAMKGSGRSQELGYFFANADTNYQGKEKMRGDYLT 240
           DN SAK G GPGESPEQDTGDS +AGAMKGSGRS ELGYFFANADTNYQGKEKM G YLT
Sbjct: 181 DNLSAKVG-GPGESPEQDTGDSMVAGAMKGSGRSSELGYFFANADTNYQGKEKMGGSYLT 240

Query: 241 NNANTGINDIDPMDLTDSMQEAMHRSNIEMSAAEFSRKEIPLHVMLTASLIKLDAPLMSF 300
           +N N+G  DIDPMDLT+SMQEAMHRSNIEMSAAEFSRKEIPLHVM +ASLIKLD+PLMSF
Sbjct: 241 SNTNSGTTDIDPMDLTESMQEAMHRSNIEMSAAEFSRKEIPLHVMPSASLIKLDSPLMSF 300

Query: 301 TDLQHVLFEEERSAYNQAILNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISALQ 360
           TDLQ+VLFEEERSAYNQAILNNMKDGK HPLTFIHHTSTYQASMCKLIEYCLSPAI+ALQ
Sbjct: 301 TDLQNVLFEEERSAYNQAILNNMKDGKAHPLTFIHHTSTYQASMCKLIEYCLSPAITALQ 360

Query: 361 DRVKENEIRLALLAEEARNLEIEAAKANDSAPGSPYQVTHGSRSSASATQRDSYPSTASV 420
           DR+KENEIRLALLAEEARNLE+EA K+N+S PGSP+QVTHGSR+SAS T RDSY STASV
Sbjct: 361 DRLKENEIRLALLAEEARNLEVEAGKSNESVPGSPHQVTHGSRASASTTHRDSYASTASV 420

Query: 421 SSRNAGSSIQRSRKGL 437
            +R AGSS+ RSRKGL
Sbjct: 421 GARTAGSSVHRSRKGL 435

[Close]

BLAST of Sed0002477 vs. ExPASy TrEMBL
Match: A0A6J1KFN1 (lys-63-specific deubiquitinase BRCC36-like OS=Cucurbita maxima OX=3661 GN=LOC111493438 PE=4 SV=1)

HSP 1 Score: 755.7 bits (1950), Expect = 1.0e-214
Identity = 393/436 (90.14%), Postives = 410/436 (94.04%), Query Frame = 0


Query: 1   MSLTAVNMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR 60
           MSLTAV MSEDVWFTCLTHALSTETEEIMGLLLGDIEH KNGSVTALIWGASPQTRSDRR
Sbjct: 1   MSLTAVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHLKNGSVTALIWGASPQTRSDRR 60

Query: 61  KDRVETHPEQLAAASAQAEIMTATTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD 120
           KDRVETHPEQLAAASAQA+ MT  TGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD
Sbjct: 61  KDRVETHPEQLAAASAQADRMTTMTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD 120

Query: 121 SGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPVYRNSVIDVESSLSSS 180
           SGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPVYRNSVIDVESSLSSS
Sbjct: 121 SGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPVYRNSVIDVESSLSSS 180

Query: 181 DNFSAKTGYGPGESPEQDTGDSTIAGAMKGSGRSQELGYFFANADTNYQGKEKMRGDYLT 240
           DN SAK G GPGESPEQDTGDS +AGAMKGSGRS ELGYFFANADTNYQGKEKM   YLT
Sbjct: 181 DNLSAKVG-GPGESPEQDTGDSMVAGAMKGSGRSSELGYFFANADTNYQGKEKMGDSYLT 240

Query: 241 NNANTGINDIDPMDLTDSMQEAMHRSNIEMSAAEFSRKEIPLHVMLTASLIKLDAPLMSF 300
           +N N+G  DIDPMDLT+SMQEAMHRSNIEMSAAEFSRKEIPLHVM +ASLIKLD+ LMSF
Sbjct: 241 SNTNSGTTDIDPMDLTESMQEAMHRSNIEMSAAEFSRKEIPLHVMPSASLIKLDSSLMSF 300

Query: 301 TDLQHVLFEEERSAYNQAILNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISALQ 360
           TDLQ+VLFEEERSAYNQAILNNMKDGK HPLTFIHHTSTYQASMCKLIEYCLSPAISALQ
Sbjct: 301 TDLQNVLFEEERSAYNQAILNNMKDGKAHPLTFIHHTSTYQASMCKLIEYCLSPAISALQ 360

Query: 361 DRVKENEIRLALLAEEARNLEIEAAKANDSAPGSPYQVTHGSRSSASATQRDSYPSTASV 420
           DR+KENE RLALLAEEARNLE+EA K+N+S PGSP+QVTHGSR+SAS T RDSY STASV
Sbjct: 361 DRLKENETRLALLAEEARNLEVEAGKSNESVPGSPHQVTHGSRASASTTHRDSYASTASV 420

Query: 421 SSRNAGSSIQRSRKGL 437
            +R+AGSS+QRSRKGL
Sbjct: 421 GARSAGSSMQRSRKGL 435

[Close]

BLAST of Sed0002477 vs. ExPASy TrEMBL
Match: A0A6J1GVS8 (lys-63-specific deubiquitinase BRCC36-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457937 PE=3 SV=1)

HSP 1 Score: 745.7 bits (1924), Expect = 1.1e-211
Identity = 388/436 (88.99%), Postives = 405/436 (92.89%), Query Frame = 0


Query: 1   MSLTAVNMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR 60
           MSLT V MSEDVWFTCLTHALSTETEEIMGLLLGDIEHS+NGSVTALIWGASPQTRSDRR
Sbjct: 1   MSLTGVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSENGSVTALIWGASPQTRSDRR 60

Query: 61  KDRVETHPEQLAAASAQAEIMTATTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD 120
           KDRVETHPEQLAAASAQAE MTA TGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD
Sbjct: 61  KDRVETHPEQLAAASAQAERMTAMTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD 120

Query: 121 SGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPVYRNSVIDVESSLSSS 180
           SGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNH SRPISLSPVYRNSVIDVESSLSSS
Sbjct: 121 SGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHQSRPISLSPVYRNSVIDVESSLSSS 180

Query: 181 DNFSAKTGYGPGESPEQDTGDSTIAGAMKGSGRSQELGYFFANADTNYQGKEKMRGDYLT 240
           DN SA  GYGP ESPEQDTGDS IAG +KG+GRS ELGYFFANADTNYQGK K+ G YLT
Sbjct: 181 DNLSANVGYGPRESPEQDTGDSMIAGTLKGTGRSSELGYFFANADTNYQGKGKIGGSYLT 240

Query: 241 NNANTGINDIDPMDLTDSMQEAMHRSNIEMSAAEFSRKEIPLHVMLTASLIKLDAPLMSF 300
            NAN+GI DIDPMDL++SMQEAMHRSNIEMSAA FSRKEIPLHVM TASLIKLD+PLMSF
Sbjct: 241 KNANSGITDIDPMDLSESMQEAMHRSNIEMSAAAFSRKEIPLHVMPTASLIKLDSPLMSF 300

Query: 301 TDLQHVLFEEERSAYNQAILNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISALQ 360
           TDLQ VLFEEERSAYNQA+L NMKDGKVHPLTFIHHTSTYQASMCKLIEYC+SP ISALQ
Sbjct: 301 TDLQQVLFEEERSAYNQAVLYNMKDGKVHPLTFIHHTSTYQASMCKLIEYCVSPVISALQ 360

Query: 361 DRVKENEIRLALLAEEARNLEIEAAKANDSAPGSPYQVTHGSRSSASATQRDSYPSTASV 420
           DR KENEIRLALLAEEARNLE+EAAKAN+S PGSP+QV HGSR+SAS   RD YPSTASV
Sbjct: 361 DRAKENEIRLALLAEEARNLEVEAAKANESVPGSPHQV-HGSRASASTNPRDLYPSTASV 420

Query: 421 SSRNAGSSIQRSRKGL 437
            +R+AGSSI +SRKGL
Sbjct: 421 GARSAGSSIHQSRKGL 435

[Close]

BLAST of Sed0002477 vs. TAIR 10
Match: AT1G80210.1 (Mov34/MPN/PAD-1 family protein )

HSP 1 Score: 496.5 bits (1277), Expect = 2.2e-140
Identity = 263/405 (64.94%), Postives = 321/405 (79.26%), Query Frame = 0


Query: 1   MSLTAVNMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKN-GSVTALIWGASPQTRSDR 60
           MSLT VNMSEDVW TCLTHALSTETEEIMGLLLGDIE+SK+ GS TA+IWGASPQ+RSDR
Sbjct: 1   MSLTCVNMSEDVWLTCLTHALSTETEEIMGLLLGDIEYSKDGGSATAMIWGASPQSRSDR 60

Query: 61  RKDRVETHPEQLAAASAQAEIMTATTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLL 120
           +KDRVET+PEQLAAASAQA+ MT +TGRTTRVIGWYHSHPHITVLPSHVDVRTQ  YQLL
Sbjct: 61  QKDRVETNPEQLAAASAQADRMTISTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLL 120

Query: 121 DSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPVYRNSVIDVESSLSS 180
           DSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGK N + + +SL    ++SVID+ESS SS
Sbjct: 121 DSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKPNSIPKSMSLVLANKDSVIDLESSFSS 180

Query: 181 SDNFSAKTGYGPGESPEQDTGDSTIAGAMKGSGRSQELGYFFANADTNYQGKEKMRGDYL 240
           SD+   ++    G++PE DT D+      KG GR  +   FF N   N +     R    
Sbjct: 181 SDSIYQRSSSARGDNPELDTSDTATTSGSKGGGRVSDFEAFFVN---NTEANNTRRDGTS 240

Query: 241 TNNANTGINDIDPMDLTDSMQEAMHRSNIEMSAAEFSRKEIPLHVMLTASLIKLDAPLMS 300
            N ++T I +ID MD+++SMQEAMHRSN+E S   + RKE+PLHV+ T+SL++L++PL S
Sbjct: 241 GNYSSTAI-EIDSMDMSESMQEAMHRSNLETSGVGYVRKEVPLHVLPTSSLLQLNSPLAS 300

Query: 301 FTDLQHVLFEEERSAYNQAILNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISAL 360
           F  LQ VL+EEER+AY+Q++  + +DG+VHPL FIH+TSTYQASMCKLIEYCLSPAI+AL
Sbjct: 301 FKSLQRVLYEEERAAYHQSVQQSKRDGRVHPLAFIHNTSTYQASMCKLIEYCLSPAINAL 360

Query: 361 QDRVKENEIRLALLAEEARNLEIEAAKANDSAPGSPYQVTHGSRS 405
           QDR+KEN+IRLA+L +EA  LE +  K  +++ G+  ++ HGS S
Sbjct: 361 QDRLKENKIRLAMLMDEAEVLEAQKLKGAETSGGAS-RLVHGSGS 400

[Close]

BLAST of Sed0002477 vs. TAIR 10
Match: AT3G06820.2 (Mov34/MPN/PAD-1 family protein )

HSP 1 Score: 485.3 bits (1248), Expect = 5.0e-137
Identity = 262/406 (64.53%), Postives = 316/406 (77.83%), Query Frame = 0


Query: 1   MSLTAVNMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNG-SVTALIWGASPQTRSDR 60
           MSLT VNMSEDVW TCLTHALSTETEEIMGLLLGDIE+SKNG S TA+IWGASPQ RSDR
Sbjct: 1   MSLTCVNMSEDVWLTCLTHALSTETEEIMGLLLGDIEYSKNGESATAMIWGASPQPRSDR 60

Query: 61  RKDRVETHPEQLAAASAQAEIMTATTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLL 120
           +KDRVET+PEQLAAASAQA+ MT +TGRTTRVIGWYHSHPHITVLPSHVDVRTQ  YQLL
Sbjct: 61  QKDRVETNPEQLAAASAQADRMTISTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLL 120

Query: 121 DSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPVYRNSVIDVESSLSS 180
           DSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGK N + + +SL    ++SVID+ESS SS
Sbjct: 121 DSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKPNSIPKSMSLVLANKDSVIDIESSSSS 180

Query: 181 SDNFSAKTGYGPGESPEQDTGDSTIAGAMKGSGRSQELGYFFA-NADTNYQGKEKMRGDY 240
           SD+   ++       PE DT D+      KG GR  + G FF  N + N  G+++    +
Sbjct: 181 SDSIYQRSS---SSKPELDTIDTATTSGSKGGGRVSDFGPFFTNNIEANITGRDE---TH 240

Query: 241 LTNNANTGINDIDPMDLTDSMQEAMHRSNIEMSAAEFSRKEIPLHVMLTASLIKLDAPLM 300
            + N ++    ID MD+++SMQEAM RSN++ S A + RKE+PLHV+ T+SL+ +++PL 
Sbjct: 241 KSGNLSSTTIGIDSMDMSESMQEAMLRSNLDTSGAGYVRKEVPLHVLPTSSLLPVNSPLA 300

Query: 301 SFTDLQHVLFEEERSAYNQAILNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISA 360
           SF  LQ VL+EEER+AY Q++  NM+DG+VHPL FIH+TSTYQASMCKLIEYCLSPAI+A
Sbjct: 301 SFKSLQRVLYEEERAAYYQSVQQNMRDGRVHPLAFIHNTSTYQASMCKLIEYCLSPAINA 360

Query: 361 LQDRVKENEIRLALLAEEARNLEIEAAKANDSAPGSPYQVTHGSRS 405
           LQDR KEN+IRLA+L +EA  LE +  K  +++   P  + HGS S
Sbjct: 361 LQDRQKENKIRLAMLMDEAEVLEAQKLKGAETS-RRPSHLVHGSGS 399

[Close]

BLAST of Sed0002477 vs. TAIR 10
Match: AT1G80210.2 (Mov34/MPN/PAD-1 family protein )

HSP 1 Score: 481.5 bits (1238), Expect = 7.2e-136
Identity = 250/373 (67.02%), Postives = 301/373 (80.70%), Query Frame = 0


Query: 1   MSLTAVNMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKN-GSVTALIWGASPQTRSDR 60
           MSLT VNMSEDVW TCLTHALSTETEEIMGLLLGDIE+SK+ GS TA+IWGASPQ+RSDR
Sbjct: 1   MSLTCVNMSEDVWLTCLTHALSTETEEIMGLLLGDIEYSKDGGSATAMIWGASPQSRSDR 60

Query: 61  RKDRVETHPEQLAAASAQAEIMTATTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLL 120
           +KDRVET+PEQLAAASAQA+ MT +TGRTTRVIGWYHSHPHITVLPSHVDVRTQ  YQLL
Sbjct: 61  QKDRVETNPEQLAAASAQADRMTISTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLL 120

Query: 121 DSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPVYRNSVIDVESSLSS 180
           DSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGK N + + +SL    ++SVID+ESS SS
Sbjct: 121 DSGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKPNSIPKSMSLVLANKDSVIDLESSFSS 180

Query: 181 SDNFSAKTGYGPGESPEQDTGDSTIAGAMKGSGRSQELGYFFANADTNYQGKEKMRGDYL 240
           SD+   ++    G++PE DT D+      KG GR  +   FF N   N +     R    
Sbjct: 181 SDSIYQRSSSARGDNPELDTSDTATTSGSKGGGRVSDFEAFFVN---NTEANNTRRDGTS 240

Query: 241 TNNANTGINDIDPMDLTDSMQEAMHRSNIEMSAAEFSRKEIPLHVMLTASLIKLDAPLMS 300
            N ++T I +ID MD+++SMQEAMHRSN+E S   + RKE+PLHV+ T+SL++L++PL S
Sbjct: 241 GNYSSTAI-EIDSMDMSESMQEAMHRSNLETSGVGYVRKEVPLHVLPTSSLLQLNSPLAS 300

Query: 301 FTDLQHVLFEEERSAYNQAILNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISAL 360
           F  LQ VL+EEER+AY+Q++  + +DG+VHPL FIH+TSTYQASMCKLIEYCLSPAI+AL
Sbjct: 301 FKSLQRVLYEEERAAYHQSVQQSKRDGRVHPLAFIHNTSTYQASMCKLIEYCLSPAINAL 360

Query: 361 QDRVKENEIRLAL 373
           QDR+KEN+IR+ +
Sbjct: 361 QDRLKENKIRVCV 369

[Close]

BLAST of Sed0002477 vs. TAIR 10
Match: AT3G06820.1 (Mov34/MPN/PAD-1 family protein )

HSP 1 Score: 354.8 bits (909), Expect = 1.0e-97
Identity = 192/325 (59.08%), Postives = 241/325 (74.15%), Query Frame = 0


Query: 81  MTATTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLDSGFIGLIFSCFSEDANKVGR 140
           MT +TGRTTRVIGWYHSHPHITVLPSHVDVRTQ  YQLLDSGFIGLIFSCFSEDANKVGR
Sbjct: 1   MTISTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDSGFIGLIFSCFSEDANKVGR 60

Query: 141 IQVIAFQSSDGKQNHLSRPISLSPVYRNSVIDVESSLSSSDNFSAKTGYGPGESPEQDTG 200
           IQVIAFQSSDGK N + + +SL    ++SVID+ESS SSSD+   ++       PE DT 
Sbjct: 61  IQVIAFQSSDGKPNSIPKSMSLVLANKDSVIDIESSSSSSDSIYQRSS---SSKPELDTI 120

Query: 201 DSTIAGAMKGSGRSQELGYFFA-NADTNYQGKEKMRGDYLTNNANTGINDIDPMDLTDSM 260
           D+      KG GR  + G FF  N + N  G+++    + + N ++    ID MD+++SM
Sbjct: 121 DTATTSGSKGGGRVSDFGPFFTNNIEANITGRDE---THKSGNLSSTTIGIDSMDMSESM 180

Query: 261 QEAMHRSNIEMSAAEFSRKEIPLHVMLTASLIKLDAPLMSFTDLQHVLFEEERSAYNQAI 320
           QEAM RSN++ S A + RKE+PLHV+ T+SL+ +++PL SF  LQ VL+EEER+AY Q++
Sbjct: 181 QEAMLRSNLDTSGAGYVRKEVPLHVLPTSSLLPVNSPLASFKSLQRVLYEEERAAYYQSV 240

Query: 321 LNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISALQDRVKENEIRLALLAEEARN 380
             NM+DG+VHPL FIH+TSTYQASMCKLIEYCLSPAI+ALQDR KEN+IRLA+L +EA  
Sbjct: 241 QQNMRDGRVHPLAFIHNTSTYQASMCKLIEYCLSPAINALQDRQKENKIRLAMLMDEAEV 300

Query: 381 LEIEAAKANDSAPGSPYQVTHGSRS 405
           LE +  K  +++   P  + HGS S
Sbjct: 301 LEAQKLKGAETS-RRPSHLVHGSGS 318

[Close]

BLAST of Sed0002477 vs. TAIR 10
Match: AT1G22920.1 (COP9 signalosome 5A )

HSP 1 Score: 47.8 bits (112), Expect = 2.7e-05
Identity = 38/143 (26.57%), Postives = 63/143 (44.06%), Query Frame = 0


Query: 6   VNMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRRKDRVE 65
           V++S       + HA S  T EIMGL+ G  E     ++  +   A P   ++ R +   
Sbjct: 59  VHISALALLKMVVHARSGGTIEIMGLMQGKTE---GDTIIVMDAFALPVEGTETRVNAQS 118

Query: 66  THPEQLAAASAQAEIMTATTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLDSGFIG 125
              E +   S  +++     GR   V+GWYHSHP      S +DV TQ   Q     F+ 
Sbjct: 119 DAYEYMVEYSQTSKL----AGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLA 178

Query: 126 LIFSCFSEDANKVGRIQVIAFQS 149
           ++           G++++ AF++
Sbjct: 179 VVID--PTRTVSAGKVEIGAFRT 192

The following BLAST results are available for this feature:

BLAST of Sed0002477 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897822.1	1.4e-218	90.83	lys-63-specific deubiquitinase BRCC36-like isoform X2 [Benincasa hispida]	[more]
XP_004152213.1	1.9e-218	91.06	lys-63-specific deubiquitinase BRCC36 isoform X1 [Cucumis sativus] >KGN52872.1 h...	[more]
XP_008454260.1	9.2e-218	90.83	PREDICTED: lys-63-specific deubiquitinase BRCC36 isoform X1 [Cucumis melo]	[more]
XP_038897814.1	4.6e-217	90.41	lys-63-specific deubiquitinase BRCC36-like isoform X1 [Benincasa hispida]	[more]
XP_023525485.1	1.7e-216	90.60	lys-63-specific deubiquitinase BRCC36-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0002477 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B5X8M4	2.1e-39	46.70	Lys-63-specific deubiquitinase BRCC36 OS=Salmo salar OX=8030 GN=brcc3 PE=2 SV=1	[more]
Q4VA72	4.7e-39	52.90	Lys-63-specific deubiquitinase BRCC36 OS=Xenopus tropicalis OX=8364 GN=brcc3 PE=...	[more]
Q66GV6	8.0e-39	52.90	Lys-63-specific deubiquitinase BRCC36 OS=Xenopus laevis OX=8355 GN=brcc3 PE=2 SV...	[more]
Q5R9L6	1.4e-38	46.07	Lys-63-specific deubiquitinase BRCC36 OS=Pongo abelii OX=9601 GN=BRCC3 PE=2 SV=1	[more]
P46737	5.2e-38	43.78	Lys-63-specific deubiquitinase BRCC36 OS=Mus musculus OX=10090 GN=Brcc3 PE=1 SV=...	[more]

BLAST of Sed0002477 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWR1	9.0e-219	91.06	MPN domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G004830 PE=3 SV...	[more]
A0A1S3BY68	4.5e-218	90.83	lys-63-specific deubiquitinase BRCC36 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1G9J9	1.4e-216	90.37	lys-63-specific deubiquitinase BRCC36-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1KFN1	1.0e-214	90.14	lys-63-specific deubiquitinase BRCC36-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1GVS8	1.1e-211	88.99	lys-63-specific deubiquitinase BRCC36-like isoform X1 OS=Cucurbita moschata OX=3...	[more]

BLAST of Sed0002477 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80210.1	2.2e-140	64.94	Mov34/MPN/PAD-1 family protein	[more]
AT3G06820.2	5.0e-137	64.53	Mov34/MPN/PAD-1 family protein	[more]
AT1G80210.2	7.2e-136	67.02	Mov34/MPN/PAD-1 family protein	[more]
AT3G06820.1	1.0e-97	59.08	Mov34/MPN/PAD-1 family protein	[more]
AT1G22920.1	2.7e-05	26.57	COP9 signalosome 5A	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 276..310
None	No IPR available	GENE3D	3.40.140.10	Cytidine Deaminase, domain 2	coord: 1..83 e-value: 3.4E-25 score: 90.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 305..356
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 312..356
None	No IPR available	PANTHER	PTHR10410:SF2	LYS-63-SPECIFIC DEUBIQUITINASE BRCC36-RELATED	coord: 2..315
None	No IPR available	PANTHER	PTHR10410	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED	coord: 2..315
None	No IPR available	SUPERFAMILY	102712	JAB1/MPN domain	coord: 5..54
IPR040749	BRCC36, C-terminal helical domain	PFAM	PF18110	BRCC36_C	coord: 217..300 e-value: 1.5E-23 score: 82.7
IPR000555	JAB1/MPN/MOV34 metalloenzyme domain	PFAM	PF01398	JAB	coord: 5..40 e-value: 2.4E-11 score: 43.6
IPR037518	MPN domain	PROSITE	PS50249	MPN	coord: 1..72 score: 15.604235

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002477.1	Sed0002477.1	mRNA
Sed0002477.2	Sed0002477.2	mRNA
Sed0002477.3	Sed0002477.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006302	double-strand break repair
biological_process	GO:0070537	histone H2A K63-linked deubiquitination
biological_process	GO:0006281	DNA repair
biological_process	GO:0070536	protein K63-linked deubiquitination
cellular_component	GO:0070531	BRCA1-A complex
cellular_component	GO:0070552	BRISC complex
molecular_function	GO:0070122	isopeptidase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008237	metallopeptidase activity
molecular_function	GO:0031593	polyubiquitin modification-dependent protein binding
molecular_function	GO:0004843	thiol-dependent deubiquitinase
molecular_function	GO:0005515	protein binding