Sed0002472 (gene) Chayote v1

Overview


Name	Sed0002472
Type	gene
Organism	Sechium edule (Chayote v1)
Description	remorin
Location	LG05: 3503935 .. 3506519 (+)
RNA-Seq Expression	Sed0002472
Synteny	Sed0002472

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTGGAGTGTCACCTTAAGTCATGTGTAACGGTAACTAACCATCATTCATGTCACTTTCCAAAACACCCCAACACAACAGTTACTCACTTTCCCCTCTTTTTTTGTCCCTTCCCTTTTGGAAATTCCATTCTCAGATTTCCCACTCCCCAATTCCCCCATGGCTGATGATTCCAACAAGCCCGATGCGGCGGTGCTGCCGTCCGATCCTCCGCCGCAACCGCTTGAAGAAATCCCGAAGGACGTTGCCGAGGAGAAAACCGTTATTCCGCCGCCGCCCGAAGCAGATACCACTGAAGACAAACCTGATGACTCCAAAGCCCTTGTTCTAGTTGAAAGTAAATGATCAAACACTCCTTTTTGTTTTTCTCTGATTTTTTTTAAAAATAATTTATTGTTATTTTTCAGCTCAGAGTTTAGTTTATGGGCCTGTTTGGTTGATGGGTAAATTGCATAATAAATTATAGATTGTTTTGTTTTGGGATTTGATTAGTTTTTCATGTGTGCCGGTTTTTTTGTTTGTTTGTTTTATGTGTTCTAAATATATTTTATGTTTTTGTTTTCTGCAGTGGTTCCAGAACCAGCTGAGCCAAAAACCACTGAGGGCTCTGTGAACAGAGGTTTACATCTATTTTTGTTTTTATTTTATTTTTGTTTCATCATTAGTTGACTCGATGTTCAAATTAGAGCTTCACTTAAAGATTTTGTGTTTGTGTTCAATCTATAGTGACCATCTTATCTTAGAATTATTTTCTTATGAATTACTTTGAAAACTGAATATAGTAGGTTGGGATGGTTGTCTAATGAAAATAGTCAAATTGTAACCATTATGAATTGGTCTAATCAAAACGAGTCTTGAGGATTGAGTACCTAAGAGATTATAGGTTTAATTATGGTAGTCACCTACCTACCTAGAAATTGATTTTCTACGAATTTTCTTGACAACTAAGTGTTGTAGCATCAGATGGTATGTCCCATGAAAATAGTCGAGGTCCATGAATATTAAAAAAATATAGTCCAATTATGCGTAAGTTGTACCAGACAGTTACATGTATCAAAAGATATTCAGAAATCTTGCTAGGATTTCAGAAATGATGGGATTGTAGTATATTGTAGTTTTTTTTCAACATTTAAACATGAACTCAAATGTTGTGACTTGTGAAATTGAGATACGATTGAAGCTGTAATTTATTTGAGTGAATGAGTGAGTTTTGCATATGATTTGTTCAGATGCTGTGCTAGCAAAAGTTGCAACAGAGAAGAGGATGTCACTGATTAAAGCTTGGGAAGAAAGTGAAAAGTCTAAGGCAGAGAACAAGTAAGATTCTTTTTCCCCCACCCTTTTTCTCTATTCAAACCTCACCAAACTTTTCATTTTTTCTCCCCATTCACTCTCCATAGATACAATTTTGAAAATCCATCTTTATAGGAATGGAACAAAATACAAAATTTTCTGTTTTTTTTGTTTTTGTTTTCAAATTGTTATCTTGTTTCAGAACATATTGTGAAACCTTATCCCATTTTTTCTTAAATAATATACATATATAGTGAGATAGTTAGATAAAATTATATTTGTTTTTGTTTTCTGAAATGTAACTCCTTGTGCAGAGCTCACAAAAAGCTATCTTCTGTTGTGGCTTGGGAGAATAGCAAAAAAGCATTTGTAGAGGCCGAGTTGAAGAAGATTGAGGTACCAAATATTATGTTCTCGCCTTTAAATTATGCTTTTCTTCCATCACGTCATGTAACTAGTGATTTTTTTTTTTATCTTGTGGACTAAATTTGAGTACTATTGAAATATTAGTATTAAAAATGAATAATTTAAAAATATCACAGGTAAAAGTGTTTGATTTTGAAACATATGAATCAAATAAAAACTACAAACTTAGGGACTAAAAAAATATTTTTCCTTTTTTTTTAATAATCGGGGAATTGTAATTTCGCTCCGAAGCATACCTTGAAGATTCTAAATCCTTACTTACGAGACAGCCTCTTTGTATGTGTTTTTTGATTACTCAGCAACCTTTTTGTGGAAGCAGATGATAATAGATACGGTTGATTTGTAGTTTGTTTGGGAATGCTTTTATTTTGACAATAAATAAACAAAACTTTGAGCAGGAAAGTTTGGAGAATAAGAAGGCCGAATACATTGAGAAAATGAAGAACAAAATTGCTCTGCTCCACAAATCAGCTGAGGAGAAGAGAGCGATAATCGAAGCCAAGCGCGGAGAAGATCTTCTCAAGGCGGAGGAGATGGCTGCAAAGTATCGTGCCACCGGTACCGCCCCGAACAACCTTCTCGGCTGCTTCTCAAGCTGAATGTTTCCGGTCTGATCATTGATATTGTTTATTCAGAAGTACAAACCTTCATCGGTTCATTTCATTTGGCTGTTAAATTAGATTTGTGTTCTGTGTGATGGAAGGAACGTTGTTTATGGTTGATTTATTGGTGTGTTTAGTGAAGGTTTAAGTGTTTGTGAATGATATTTAGGAGAAGATTACTTTGAATGTAAATTTAACATCATTGGCAGAGTGATTATAATTTATTGAACTTAATCAGAAATGCAAAATGTCAACATATTTGA

mRNA sequence

ATTTTGGAGTGTCACCTTAAGTCATGTGTAACGGTAACTAACCATCATTCATGTCACTTTCCAAAACACCCCAACACAACAGTTACTCACTTTCCCCTCTTTTTTTGTCCCTTCCCTTTTGGAAATTCCATTCTCAGATTTCCCACTCCCCAATTCCCCCATGGCTGATGATTCCAACAAGCCCGATGCGGCGGTGCTGCCGTCCGATCCTCCGCCGCAACCGCTTGAAGAAATCCCGAAGGACGTTGCCGAGGAGAAAACCGTTATTCCGCCGCCGCCCGAAGCAGATACCACTGAAGACAAACCTGATGACTCCAAAGCCCTTGTTCTAGTTGAAATGGTTCCAGAACCAGCTGAGCCAAAAACCACTGAGGGCTCTGTGAACAGAGATGCTGTGCTAGCAAAAGTTGCAACAGAGAAGAGGATGTCACTGATTAAAGCTTGGGAAGAAAGTGAAAAGTCTAAGGCAGAGAACAAAGCTCACAAAAAGCTATCTTCTGTTGTGGCTTGGGAGAATAGCAAAAAAGCATTTGTAGAGGCCGAGTTGAAGAAGATTGAGGAAAGTTTGGAGAATAAGAAGGCCGAATACATTGAGAAAATGAAGAACAAAATTGCTCTGCTCCACAAATCAGCTGAGGAGAAGAGAGCGATAATCGAAGCCAAGCGCGGAGAAGATCTTCTCAAGGCGGAGGAGATGGCTGCAAAGTATCGTGCCACCGGTACCGCCCCGAACAACCTTCTCGGCTGCTTCTCAAGCTGAATGTTTCCGGTCTGATCATTGATATTGTTTATTCAGAAGTACAAACCTTCATCGGTTCATTTCATTTGGCTGTTAAATTAGATTTGTGTTCTGTGTGATGGAAGGAACGTTGTTTATGGTTGATTTATTGGTGTGTTTAGTGAAGGTTTAAGTGTTTGTGAATGATATTTAGGAGAAGATTACTTTGAATGTAAATTTAACATCATTGGCAGAGTGATTATAATTTATTGAACTTAATCAGAAATGCAAAATGTCAACATATTTGA

Coding sequence (CDS)

ATGGCTGATGATTCCAACAAGCCCGATGCGGCGGTGCTGCCGTCCGATCCTCCGCCGCAACCGCTTGAAGAAATCCCGAAGGACGTTGCCGAGGAGAAAACCGTTATTCCGCCGCCGCCCGAAGCAGATACCACTGAAGACAAACCTGATGACTCCAAAGCCCTTGTTCTAGTTGAAATGGTTCCAGAACCAGCTGAGCCAAAAACCACTGAGGGCTCTGTGAACAGAGATGCTGTGCTAGCAAAAGTTGCAACAGAGAAGAGGATGTCACTGATTAAAGCTTGGGAAGAAAGTGAAAAGTCTAAGGCAGAGAACAAAGCTCACAAAAAGCTATCTTCTGTTGTGGCTTGGGAGAATAGCAAAAAAGCATTTGTAGAGGCCGAGTTGAAGAAGATTGAGGAAAGTTTGGAGAATAAGAAGGCCGAATACATTGAGAAAATGAAGAACAAAATTGCTCTGCTCCACAAATCAGCTGAGGAGAAGAGAGCGATAATCGAAGCCAAGCGCGGAGAAGATCTTCTCAAGGCGGAGGAGATGGCTGCAAAGTATCGTGCCACCGGTACCGCCCCGAACAACCTTCTCGGCTGCTTCTCAAGCTGA

Protein sequence

MADDSNKPDAAVLPSDPPPQPLEEIPKDVAEEKTVIPPPPEADTTEDKPDDSKALVLVEMVPEPAEPKTTEGSVNRDAVLAKVATEKRMSLIKAWEESEKSKAENKAHKKLSSVVAWENSKKAFVEAELKKIEESLENKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEEMAAKYRATGTAPNNLLGCFSS

Homology

[Close]

BLAST of Sed0002472 vs. NCBI nr
Match: XP_023532341.1 (remorin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 292.7 bits (748), Expect = 2.3e-75
Identity = 166/198 (83.84%), Postives = 175/198 (88.38%), Query Frame = 0


Query: 1   MADDSNKPDAAVLPSDPPPQPL-EEIPKDVAEEKTVIPPPPEADTTEDKPDDSKALVLVE 60
           MAD SN P++A  PS+PPPQP  EE PKDVAEEK VIPPPP     EDKPDDSKALVLVE
Sbjct: 1   MADASNNPESAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPP--PPVEDKPDDSKALVLVE 60

Query: 61  MVPEPAEPKTTEGSVNRDAVLAKVATEKRMSLIKAWEESEKSKAENKAHKKLSSVVAWEN 120
            V EP EPK+TEGSVNRDAVLAKVATEKR+SLIKAWEESEKSKAENKAHKKLSSVVAWEN
Sbjct: 61  KVSEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWEN 120

Query: 121 SKKAFVEAELKKIEESLENKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEEM 180
           S+KA VEAELKKIEESLE KKAEY+EKMKN+IALLHKSAEEKRA+IEA RGEDLLKAEE 
Sbjct: 121 SRKASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEET 180

Query: 181 AAKYRATGTAPNNLLGCF 198
           AAKYRATGTAP  L GCF
Sbjct: 181 AAKYRATGTAPKKLFGCF 196

[Close]

BLAST of Sed0002472 vs. NCBI nr
Match: XP_008465865.1 (PREDICTED: remorin [Cucumis melo])

HSP 1 Score: 291.6 bits (745), Expect = 5.2e-75
Identity = 168/199 (84.42%), Postives = 177/199 (88.94%), Query Frame = 0


Query: 1   MADDSNKPDAAVLPSDPPPQPLEEIPKDVAEEKTVIPPPPEADTTEDKPDDSKALVLVEM 60
           MA++S K ++   PSDPPP P EE+PKDVAEEK+VIPPPP     EDK DDSKALVLVE 
Sbjct: 1   MAEESKKIESPP-PSDPPPPPPEELPKDVAEEKSVIPPPP-----EDKTDDSKALVLVEK 60

Query: 61  VPEPAEPKTTEGSVNRDAVLAKVATEKRMSLIKAWEESEKSKAENKAHKKLSSVVAWENS 120
           VPE A+PK+TEGSVNRDAVLAKVATEKR+SLIKAWEESEKSKAENKAHKKLSSV AWENS
Sbjct: 61  VPEVADPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVAAWENS 120

Query: 121 KKAFVEAELKKIEESLENKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEEMA 180
           KKA VEAELKKIEESLE KK EYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEE A
Sbjct: 121 KKASVEAELKKIEESLEKKKGEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEETA 180

Query: 181 AKYRATGTAPNNLLGCFSS 200
           AKYRATGTAP  LLGCFSS
Sbjct: 181 AKYRATGTAPKKLLGCFSS 193

[Close]

BLAST of Sed0002472 vs. NCBI nr
Match: XP_022995196.1 (remorin-like [Cucurbita maxima])

HSP 1 Score: 290.8 bits (743), Expect = 8.9e-75
Identity = 165/198 (83.33%), Postives = 174/198 (87.88%), Query Frame = 0


Query: 1   MADDSNKPDAAVLPSDPPPQPL-EEIPKDVAEEKTVIPPPPEADTTEDKPDDSKALVLVE 60
           MAD SN P++A  PS+PPPQP  EE PKDVAEEK VIPPPP     EDKPDDSKALV VE
Sbjct: 1   MADASNNPESAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPP--PPVEDKPDDSKALVPVE 60

Query: 61  MVPEPAEPKTTEGSVNRDAVLAKVATEKRMSLIKAWEESEKSKAENKAHKKLSSVVAWEN 120
              EP EPK+TEGSVNRDAVLAKVATEKR+SLIKAWEESEKSKAENKAHKKLSSVVAWEN
Sbjct: 61  QYSEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWEN 120

Query: 121 SKKAFVEAELKKIEESLENKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEEM 180
           S+KA VEAELKKIEESLE KKAEY+EKMKN+IALLHKSAEEKRA+IEA RGEDLLKAEEM
Sbjct: 121 SRKASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEEM 180

Query: 181 AAKYRATGTAPNNLLGCF 198
           AAKYRATGTAP  L GCF
Sbjct: 181 AAKYRATGTAPKKLFGCF 196

[Close]

BLAST of Sed0002472 vs. NCBI nr
Match: KAG7035629.1 (hypothetical protein SDJN02_02427 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 290.4 bits (742), Expect = 1.2e-74
Identity = 166/198 (83.84%), Postives = 173/198 (87.37%), Query Frame = 0


Query: 1   MADDSNKPDAAVLPSDPPPQPL-EEIPKDVAEEKTVIPPPPEADTTEDKPDDSKALVLVE 60
           MAD SN P  A  PS+PPPQP  EE PKDVAEEK VIPPPP     EDKPDDSKALVLVE
Sbjct: 1   MADASNNPVTAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPP--PPVEDKPDDSKALVLVE 60

Query: 61  MVPEPAEPKTTEGSVNRDAVLAKVATEKRMSLIKAWEESEKSKAENKAHKKLSSVVAWEN 120
            V EP EPK+TEGSVNRDAVLAKVATEKR+SLIKAWEESEKSKAENKAHKKLSSVVAWEN
Sbjct: 61  KVSEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWEN 120

Query: 121 SKKAFVEAELKKIEESLENKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEEM 180
           S+KA VEAELKKIEESLE KKAEY+EKMKN+IALLHKSAEEKRA+IEA RGEDLLKAEE 
Sbjct: 121 SRKASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEET 180

Query: 181 AAKYRATGTAPNNLLGCF 198
           AAKYRATGTAP  L GCF
Sbjct: 181 AAKYRATGTAPKKLFGCF 196

[Close]

BLAST of Sed0002472 vs. NCBI nr
Match: XP_022957725.1 (remorin-like [Cucurbita moschata])

HSP 1 Score: 289.7 bits (740), Expect = 2.0e-74
Identity = 165/198 (83.33%), Postives = 174/198 (87.88%), Query Frame = 0


Query: 1   MADDSNKPDAAVLPSDPPPQPL-EEIPKDVAEEKTVIPPPPEADTTEDKPDDSKALVLVE 60
           MAD SN P++A  PS+PPPQP  EE  KDVAEEK VIPPPP     EDKPDDSKALVLVE
Sbjct: 1   MADASNNPESAAPPSNPPPQPAEEEASKDVAEEKAVIPPPP--PPVEDKPDDSKALVLVE 60

Query: 61  MVPEPAEPKTTEGSVNRDAVLAKVATEKRMSLIKAWEESEKSKAENKAHKKLSSVVAWEN 120
            V EP EPK+TEGSVNRDAVLAKVATEKR+SLIKAWEESEKSKAENKAHKKLSSVVAWEN
Sbjct: 61  KVSEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWEN 120

Query: 121 SKKAFVEAELKKIEESLENKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEEM 180
           S+KA VEAELKKIEESLE KKAEY+EKMKN+IALLHKSAEEKRA+IEA RGEDLLKAEE 
Sbjct: 121 SRKASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEET 180

Query: 181 AAKYRATGTAPNNLLGCF 198
           AAKYRATGTAP  L GCF
Sbjct: 181 AAKYRATGTAPKKLFGCF 196

[Close]

BLAST of Sed0002472 vs. ExPASy Swiss-Prot
Match: P93788 (Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.1e-58
Identity = 139/200 (69.50%), Postives = 161/200 (80.50%), Query Frame = 0


Query: 1   MADDSNKPDAAVLPSDPPPQPLEEIPKDVAEEKTVIPP--PPEADTTEDKPDDSKALVLV 60
           MA+   K    V P+ P P P+E   + VA+EK ++ P  PP A+  E KPDDSKALV+V
Sbjct: 1   MAELEAKKVEIVDPAPPAPGPVEAPKEVVADEKAIVAPALPPPAEEKE-KPDDSKALVVV 60

Query: 61  E-MVPEPAEPKTTEGSVNRDAVLAKVATEKRMSLIKAWEESEKSKAENKAHKKLSSVVAW 120
           E   PEPA+ K  EGS++RDAVLA+VATEKR+SLIKAWEESEKSKAENKA KK+S++ AW
Sbjct: 61  ETKAPEPADEK-KEGSIDRDAVLARVATEKRVSLIKAWEESEKSKAENKAQKKVSAIGAW 120

Query: 121 ENSKKAFVEAELKKIEESLENKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAE 180
           ENSKKA +EAELKK+EE LE KKAEY EKMKNKIALLHK AEEKRA+IEAKRGEDLLKAE
Sbjct: 121 ENSKKANLEAELKKMEEQLEKKKAEYTEKMKNKIALLHKEAEEKRAMIEAKRGEDLLKAE 180

Query: 181 EMAAKYRATGTAPNNLLGCF 198
           E+AAKYRATGTAP  +LG F
Sbjct: 181 ELAAKYRATGTAPKKILGIF 198

[Close]

BLAST of Sed0002472 vs. ExPASy Swiss-Prot
Match: Q9FFA5 (Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.7e-52
Identity = 126/190 (66.32%), Postives = 147/190 (77.37%), Query Frame = 0


Query: 15  SDPPPQPLEEIPK-----DVA-EEKTVIPPP--PEADTTEDKPDDSKALVLVEMVPEPAE 74
           S+P P P   + K     DVA +EK V PPP  P     E+K +DSKA+V V  VP+  E
Sbjct: 14  SEPTPTPEVPVEKPAAAADVAPQEKPVAPPPVLPSPAPAEEKQEDSKAIVPV--VPKEVE 73

Query: 75  PKTTEGSVNRDAVLAKVATEKRMSLIKAWEESEKSKAENKAHKKLSSVVAWENSKKAFVE 134
            +  EGSVNRDAVLA+V TEKRMSLIKAWEE+EK K ENKA KKLSS+ +WEN+KKA VE
Sbjct: 74  EEKKEGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVE 133

Query: 135 AELKKIEESLENKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEEMAAKYRAT 194
           AELKK+EE LE KKAEY+E+MKNKIA +HK AEEKRA+IEAKRGE++LKAEE+AAKYRAT
Sbjct: 134 AELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYRAT 193

Query: 195 GTAPNNLLGC 197
           GTAP  L GC
Sbjct: 194 GTAPKKLFGC 201

[Close]

BLAST of Sed0002472 vs. ExPASy Swiss-Prot
Match: Q9M2D8 (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 PE=1 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 3.3e-48
Identity = 117/195 (60.00%), Postives = 139/195 (71.28%), Query Frame = 0


Query: 4   DSNKPDAAVLPSDPPPQPLEEIPKDVAEEKTVIPPPPEADTTEDKPDDSKALVLVEM-VP 63
           D+  P  A +P+  P     ++ KDVAEEK   PPP      E   DDSKAL +VE  V 
Sbjct: 24  DTPAPAPAEIPAPAPAPTPADVTKDVAEEKIQNPPP------EQIFDDSKALTVVEKPVE 83

Query: 64  EPAEPKTTEGSVNRDAVLAKVATEKRMSLIKAWEESEKSKAENKAHKKLSSVVAWENSKK 123
           EPA  K    S++RD  LA ++ EKR+S ++AWEESEKSKAENKA KK++ V AWENSKK
Sbjct: 84  EPAPAKPASASLDRDVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKK 143

Query: 124 AFVEAELKKIEESLENKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEEMAAK 183
           A VEA+LKKIEE LE KKAEY E+MKNK+A +HK AEE+RA+IEAKRGED+LKAEE AAK
Sbjct: 144 AAVEAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAK 203

Query: 184 YRATGTAPNNLLGCF 198
           YRATG  P    GCF
Sbjct: 204 YRATGIVPKATCGCF 212

[Close]

BLAST of Sed0002472 vs. ExPASy Swiss-Prot
Match: O80837 (Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.1e-43
Identity = 110/195 (56.41%), Postives = 131/195 (67.18%), Query Frame = 0


Query: 4   DSNKPDAAVLPSDPPPQPLEEIPKDVAEEKTVIPPPPEADTTEDKPDDSKALVLVEM-VP 63
           D   P       +P P P+E     VA+EK   PPP E          SKAL +VE  + 
Sbjct: 11  DVESPAVLAPAKEPTPAPVE-----VADEKIHNPPPVE----------SKALAVVEKPIE 70

Query: 64  EPAEPKTTEGSVNRDAVLAKVATEKRMSLIKAWEESEKSKAENKAHKKLSSVVAWENSKK 123
           E    K + GS +RD +LA +  EK+ S IKAWEESEKSKAEN+A KK+S V AWENSKK
Sbjct: 71  EHTPKKASSGSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKK 130

Query: 124 AFVEAELKKIEESLENKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEEMAAK 183
           A VEA+L+KIEE LE KKA+Y EKMKNK+A +HK AEEKRA++EAK+GE+LLKAEEM AK
Sbjct: 131 AAVEAQLRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAK 190

Query: 184 YRATGTAPNNLLGCF 198
           YRATG  P    GCF
Sbjct: 191 YRATGVVPKATCGCF 190

[Close]

BLAST of Sed0002472 vs. ExPASy Swiss-Prot
Match: Q7XII4 (Remorin 4.1 OS=Oryza sativa subsp. japonica OX=39947 GN=REM4.1 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 6.1e-10
Identity = 45/131 (34.35%), Postives = 71/131 (54.20%), Query Frame = 0


Query: 61  VPEPAEPKTTEGSVNRDAVLAKVATEKRMSLIKAWEESEKSKAENKAHKKLSSVVAWENS 120
           +P P +  +  G    +  + +V  E+  S I AW+ +E +K  N+  ++   +  WE  
Sbjct: 181 LPAPGDVSSAGGGHGDEVSVGQVKKEEVESKIAAWQIAEVAKVNNRFKREEVVINGWEGD 240

Query: 121 KKAFVEAELKKIEESLENKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEEMA 180
           +     A LKK E  LE K+A+ +EK +N++A   + AEEKRA  EAKRG  + +  E+A
Sbjct: 241 QVEKANAWLKKYERKLEEKRAKAMEKAQNEVAKARRKAEEKRASAEAKRGTKVARVLELA 300

Query: 181 AKYRATGTAPN 192
              RA G AP+
Sbjct: 301 NFMRAVGRAPS 311

[Close]

BLAST of Sed0002472 vs. ExPASy TrEMBL
Match: A0A1S3CPW1 (remorin OS=Cucumis melo OX=3656 GN=LOC103503454 PE=3 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.5e-75
Identity = 168/199 (84.42%), Postives = 177/199 (88.94%), Query Frame = 0


Query: 1   MADDSNKPDAAVLPSDPPPQPLEEIPKDVAEEKTVIPPPPEADTTEDKPDDSKALVLVEM 60
           MA++S K ++   PSDPPP P EE+PKDVAEEK+VIPPPP     EDK DDSKALVLVE 
Sbjct: 1   MAEESKKIESPP-PSDPPPPPPEELPKDVAEEKSVIPPPP-----EDKTDDSKALVLVEK 60

Query: 61  VPEPAEPKTTEGSVNRDAVLAKVATEKRMSLIKAWEESEKSKAENKAHKKLSSVVAWENS 120
           VPE A+PK+TEGSVNRDAVLAKVATEKR+SLIKAWEESEKSKAENKAHKKLSSV AWENS
Sbjct: 61  VPEVADPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVAAWENS 120

Query: 121 KKAFVEAELKKIEESLENKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEEMA 180
           KKA VEAELKKIEESLE KK EYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEE A
Sbjct: 121 KKASVEAELKKIEESLEKKKGEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEETA 180

Query: 181 AKYRATGTAPNNLLGCFSS 200
           AKYRATGTAP  LLGCFSS
Sbjct: 181 AKYRATGTAPKKLLGCFSS 193

[Close]

BLAST of Sed0002472 vs. ExPASy TrEMBL
Match: A0A6J1K1B5 (remorin-like OS=Cucurbita maxima OX=3661 GN=LOC111490815 PE=3 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 4.3e-75
Identity = 165/198 (83.33%), Postives = 174/198 (87.88%), Query Frame = 0


Query: 1   MADDSNKPDAAVLPSDPPPQPL-EEIPKDVAEEKTVIPPPPEADTTEDKPDDSKALVLVE 60
           MAD SN P++A  PS+PPPQP  EE PKDVAEEK VIPPPP     EDKPDDSKALV VE
Sbjct: 1   MADASNNPESAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPP--PPVEDKPDDSKALVPVE 60

Query: 61  MVPEPAEPKTTEGSVNRDAVLAKVATEKRMSLIKAWEESEKSKAENKAHKKLSSVVAWEN 120
              EP EPK+TEGSVNRDAVLAKVATEKR+SLIKAWEESEKSKAENKAHKKLSSVVAWEN
Sbjct: 61  QYSEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWEN 120

Query: 121 SKKAFVEAELKKIEESLENKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEEM 180
           S+KA VEAELKKIEESLE KKAEY+EKMKN+IALLHKSAEEKRA+IEA RGEDLLKAEEM
Sbjct: 121 SRKASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEEM 180

Query: 181 AAKYRATGTAPNNLLGCF 198
           AAKYRATGTAP  L GCF
Sbjct: 181 AAKYRATGTAPKKLFGCF 196

[Close]

BLAST of Sed0002472 vs. ExPASy TrEMBL
Match: A0A6J1H1B9 (remorin-like OS=Cucurbita moschata OX=3662 GN=LOC111459182 PE=3 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 9.6e-75
Identity = 165/198 (83.33%), Postives = 174/198 (87.88%), Query Frame = 0


Query: 1   MADDSNKPDAAVLPSDPPPQPL-EEIPKDVAEEKTVIPPPPEADTTEDKPDDSKALVLVE 60
           MAD SN P++A  PS+PPPQP  EE  KDVAEEK VIPPPP     EDKPDDSKALVLVE
Sbjct: 1   MADASNNPESAAPPSNPPPQPAEEEASKDVAEEKAVIPPPP--PPVEDKPDDSKALVLVE 60

Query: 61  MVPEPAEPKTTEGSVNRDAVLAKVATEKRMSLIKAWEESEKSKAENKAHKKLSSVVAWEN 120
            V EP EPK+TEGSVNRDAVLAKVATEKR+SLIKAWEESEKSKAENKAHKKLSSVVAWEN
Sbjct: 61  KVSEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWEN 120

Query: 121 SKKAFVEAELKKIEESLENKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEEM 180
           S+KA VEAELKKIEESLE KKAEY+EKMKN+IALLHKSAEEKRA+IEA RGEDLLKAEE 
Sbjct: 121 SRKASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEET 180

Query: 181 AAKYRATGTAPNNLLGCF 198
           AAKYRATGTAP  L GCF
Sbjct: 181 AAKYRATGTAPKKLFGCF 196

[Close]

BLAST of Sed0002472 vs. ExPASy TrEMBL
Match: A0A6J1DYY5 (remorin-like OS=Momordica charantia OX=3673 GN=LOC111025889 PE=3 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.4e-73
Identity = 164/198 (82.83%), Postives = 171/198 (86.36%), Query Frame = 0


Query: 1   MADDSNKPDAAVLPSDPPPQPLEEIPKDVAEEKTVIPPPPEADTTEDKP-DDSKALVLVE 60
           MA++S  P++        P P EE+PKDVAEEKTVIPPPP     EDKP DDSKALVLVE
Sbjct: 1   MAEESKNPEST-------PPPAEEVPKDVAEEKTVIPPPPPPPPAEDKPADDSKALVLVE 60

Query: 61  MVPEPAEPKTTEGSVNRDAVLAKVATEKRMSLIKAWEESEKSKAENKAHKKLSSVVAWEN 120
            VPE AEPK+ EGSVNRD VLAKVATEKRMSLIKAWEESEKSKAENKAHKKLSSVVAWEN
Sbjct: 61  KVPEAAEPKSAEGSVNRDTVLAKVATEKRMSLIKAWEESEKSKAENKAHKKLSSVVAWEN 120

Query: 121 SKKAFVEAELKKIEESLENKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEEM 180
           SKKA VEAELKKIEESLE KKAEYIEKMKNKIALLHK+AEEKRAIIEAKRGEDLLKAEE 
Sbjct: 121 SKKASVEAELKKIEESLEKKKAEYIEKMKNKIALLHKTAEEKRAIIEAKRGEDLLKAEET 180

Query: 181 AAKYRATGTAPNNLLGCF 198
           AAKYRATGTAP  LLGCF
Sbjct: 181 AAKYRATGTAPKKLLGCF 191

[Close]

BLAST of Sed0002472 vs. ExPASy TrEMBL
Match: A0A6J1GJE1 (remorin-like OS=Cucurbita moschata OX=3662 GN=LOC111454820 PE=3 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 3.8e-71
Identity = 159/197 (80.71%), Postives = 169/197 (85.79%), Query Frame = 0


Query: 9   DAAVLPSDPPPQPLEEIPKDVAEEKTVIPPPPEA------DTTEDKPDDSKALVLVEMVP 68
           D +  PSDPPP P +E+PKDVAEEKTVIPPPP +         E K DDSKALVLVE VP
Sbjct: 3   DQSTPPSDPPPPPPQELPKDVAEEKTVIPPPPPSAPVPAPTPAEHKTDDSKALVLVEKVP 62

Query: 69  EPAEPKTTEGSVNRDAVLAKVATEKRMSLIKAWEESEKSKAENKAHKKLSSVVAWENSKK 128
           E  E K++EGSVNRDAVLAKVATEKR+SLIKAWEESEKSKAENKAHKKLSSVVAWENS+K
Sbjct: 63  EAGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENKAHKKLSSVVAWENSRK 122

Query: 129 AFVEAELKKIEESLENKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEEMAAK 188
           A VEAELKKIEE+LE KKAEYIEKMKNKIALLHK AEEKRAIIEAKRGE+LLKAEE AAK
Sbjct: 123 ASVEAELKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETAAK 182

Query: 189 YRATGTAPNNLLGCFSS 200
           YRATGTAP  LL CFSS
Sbjct: 183 YRATGTAPKKLLSCFSS 199

[Close]

BLAST of Sed0002472 vs. TAIR 10
Match: AT5G23750.1 (Remorin family protein )

HSP 1 Score: 207.2 bits (526), Expect = 1.2e-53
Identity = 126/190 (66.32%), Postives = 147/190 (77.37%), Query Frame = 0


Query: 15  SDPPPQPLEEIPK-----DVA-EEKTVIPPP--PEADTTEDKPDDSKALVLVEMVPEPAE 74
           S+P P P   + K     DVA +EK V PPP  P     E+K +DSKA+V V  VP+  E
Sbjct: 14  SEPTPTPEVPVEKPAAAADVAPQEKPVAPPPVLPSPAPAEEKQEDSKAIVPV--VPKEVE 73

Query: 75  PKTTEGSVNRDAVLAKVATEKRMSLIKAWEESEKSKAENKAHKKLSSVVAWENSKKAFVE 134
            +  EGSVNRDAVLA+V TEKRMSLIKAWEE+EK K ENKA KKLSS+ +WEN+KKA VE
Sbjct: 74  EEKKEGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVE 133

Query: 135 AELKKIEESLENKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEEMAAKYRAT 194
           AELKK+EE LE KKAEY+E+MKNKIA +HK AEEKRA+IEAKRGE++LKAEE+AAKYRAT
Sbjct: 134 AELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYRAT 193

Query: 195 GTAPNNLLGC 197
           GTAP  L GC
Sbjct: 194 GTAPKKLFGC 201

[Close]

BLAST of Sed0002472 vs. TAIR 10
Match: AT5G23750.2 (Remorin family protein )

HSP 1 Score: 204.1 bits (518), Expect = 1.0e-52
Identity = 127/190 (66.84%), Postives = 147/190 (77.37%), Query Frame = 0


Query: 15  SDPPPQPLEEIPK-----DVA-EEKTVIPPP--PEADTTEDKPDDSKALVLVEMVPEPAE 74
           S+P P P   + K     DVA +EK V PPP  P     E+K +DSKA+V V  VP+  E
Sbjct: 14  SEPTPTPEVPVEKPAAAADVAPQEKPVAPPPVLPSPAPAEEKQEDSKAIVPV--VPKVEE 73

Query: 75  PKTTEGSVNRDAVLAKVATEKRMSLIKAWEESEKSKAENKAHKKLSSVVAWENSKKAFVE 134
            K  EGSVNRDAVLA+V TEKRMSLIKAWEE+EK K ENKA KKLSS+ +WEN+KKA VE
Sbjct: 74  EK-KEGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVE 133

Query: 135 AELKKIEESLENKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEEMAAKYRAT 194
           AELKK+EE LE KKAEY+E+MKNKIA +HK AEEKRA+IEAKRGE++LKAEE+AAKYRAT
Sbjct: 134 AELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYRAT 193

Query: 195 GTAPNNLLGC 197
           GTAP  L GC
Sbjct: 194 GTAPKKLFGC 200

[Close]

BLAST of Sed0002472 vs. TAIR 10
Match: AT3G48940.1 (Remorin family protein )

HSP 1 Score: 193.7 bits (491), Expect = 1.4e-49
Identity = 117/176 (66.48%), Postives = 132/176 (75.00%), Query Frame = 0


Query: 22  LEEIPKDVAEEKTVIPPPPEADTTEDKPDDSKALVLVEMVPEPAEPKTTEGSVNRDAVLA 81
           LEE  K +  E     P P   + E+K DDSKA+VLV    EP E K   GSV+RDAVL 
Sbjct: 3   LEEQKKVIMPEAVASEPSP--PSKEEKSDDSKAIVLVVAAKEPTEDKKV-GSVHRDAVLV 62

Query: 82  KVATEKRMSLIKAWEESEKSKAENKAHKKLSSVVAWENSKKAFVEAELKKIEESLENKKA 141
           ++  +KR+SLIKAWEE+EKSK ENKA KK+SSV AWENSKKA VEAELKKIEE L  KKA
Sbjct: 63  RLEQDKRISLIKAWEEAEKSKVENKAQKKISSVGAWENSKKASVEAELKKIEEQLNKKKA 122

Query: 142 EYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEEMAAKYRATGTAPNNLLGCF 198
            Y E+MKNKIA +HK AEEKRA+ EAKRGED+LKAEEMAAKYRATGTAP  L G F
Sbjct: 123 HYTEQMKNKIAQIHKEAEEKRAMTEAKRGEDVLKAEEMAAKYRATGTAPTKLFGFF 175

[Close]

BLAST of Sed0002472 vs. TAIR 10
Match: AT3G61260.1 (Remorin family protein )

HSP 1 Score: 193.0 bits (489), Expect = 2.3e-49
Identity = 117/195 (60.00%), Postives = 139/195 (71.28%), Query Frame = 0


Query: 4   DSNKPDAAVLPSDPPPQPLEEIPKDVAEEKTVIPPPPEADTTEDKPDDSKALVLVEM-VP 63
           D+  P  A +P+  P     ++ KDVAEEK   PPP      E   DDSKAL +VE  V 
Sbjct: 24  DTPAPAPAEIPAPAPAPTPADVTKDVAEEKIQNPPP------EQIFDDSKALTVVEKPVE 83

Query: 64  EPAEPKTTEGSVNRDAVLAKVATEKRMSLIKAWEESEKSKAENKAHKKLSSVVAWENSKK 123
           EPA  K    S++RD  LA ++ EKR+S ++AWEESEKSKAENKA KK++ V AWENSKK
Sbjct: 84  EPAPAKPASASLDRDVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKK 143

Query: 124 AFVEAELKKIEESLENKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEEMAAK 183
           A VEA+LKKIEE LE KKAEY E+MKNK+A +HK AEE+RA+IEAKRGED+LKAEE AAK
Sbjct: 144 AAVEAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAK 203

Query: 184 YRATGTAPNNLLGCF 198
           YRATG  P    GCF
Sbjct: 204 YRATGIVPKATCGCF 212

[Close]

BLAST of Sed0002472 vs. TAIR 10
Match: AT2G45820.1 (Remorin family protein )

HSP 1 Score: 177.9 bits (450), Expect = 7.8e-45
Identity = 110/195 (56.41%), Postives = 131/195 (67.18%), Query Frame = 0


Query: 4   DSNKPDAAVLPSDPPPQPLEEIPKDVAEEKTVIPPPPEADTTEDKPDDSKALVLVEM-VP 63
           D   P       +P P P+E     VA+EK   PPP E          SKAL +VE  + 
Sbjct: 11  DVESPAVLAPAKEPTPAPVE-----VADEKIHNPPPVE----------SKALAVVEKPIE 70

Query: 64  EPAEPKTTEGSVNRDAVLAKVATEKRMSLIKAWEESEKSKAENKAHKKLSSVVAWENSKK 123
           E    K + GS +RD +LA +  EK+ S IKAWEESEKSKAEN+A KK+S V AWENSKK
Sbjct: 71  EHTPKKASSGSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKK 130

Query: 124 AFVEAELKKIEESLENKKAEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEEMAAK 183
           A VEA+L+KIEE LE KKA+Y EKMKNK+A +HK AEEKRA++EAK+GE+LLKAEEM AK
Sbjct: 131 AAVEAQLRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAK 190

Query: 184 YRATGTAPNNLLGCF 198
           YRATG  P    GCF
Sbjct: 191 YRATGVVPKATCGCF 190

The following BLAST results are available for this feature:

BLAST of Sed0002472 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023532341.1	2.3e-75	83.84	remorin-like [Cucurbita pepo subsp. pepo]	[more]
XP_008465865.1	5.2e-75	84.42	PREDICTED: remorin [Cucumis melo]	[more]
XP_022995196.1	8.9e-75	83.33	remorin-like [Cucurbita maxima]	[more]
KAG7035629.1	1.2e-74	83.84	hypothetical protein SDJN02_02427 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022957725.1	2.0e-74	83.33	remorin-like [Cucurbita moschata]	[more]

BLAST of Sed0002472 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93788	2.1e-58	69.50	Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1	[more]
Q9FFA5	1.7e-52	66.32	Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1	[more]
Q9M2D8	3.3e-48	60.00	Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 P...	[more]
O80837	1.1e-43	56.41	Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1	[more]
Q7XII4	6.1e-10	34.35	Remorin 4.1 OS=Oryza sativa subsp. japonica OX=39947 GN=REM4.1 PE=1 SV=1	[more]

BLAST of Sed0002472 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CPW1	2.5e-75	84.42	remorin OS=Cucumis melo OX=3656 GN=LOC103503454 PE=3 SV=1	[more]
A0A6J1K1B5	4.3e-75	83.33	remorin-like OS=Cucurbita maxima OX=3661 GN=LOC111490815 PE=3 SV=1	[more]
A0A6J1H1B9	9.6e-75	83.33	remorin-like OS=Cucurbita moschata OX=3662 GN=LOC111459182 PE=3 SV=1	[more]
A0A6J1DYY5	1.4e-73	82.83	remorin-like OS=Momordica charantia OX=3673 GN=LOC111025889 PE=3 SV=1	[more]
A0A6J1GJE1	3.8e-71	80.71	remorin-like OS=Cucurbita moschata OX=3662 GN=LOC111454820 PE=3 SV=1	[more]

BLAST of Sed0002472 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23750.1	1.2e-53	66.32	Remorin family protein	[more]
AT5G23750.2	1.0e-52	66.84	Remorin family protein	[more]
AT3G48940.1	1.4e-49	66.48	Remorin family protein	[more]
AT3G61260.1	2.3e-49	60.00	Remorin family protein	[more]
AT2G45820.1	7.8e-45	56.41	Remorin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 122..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..53
None	No IPR available	PANTHER	PTHR31775:SF5	REMORIN 1.4	coord: 6..198
None	No IPR available	PANTHER	PTHR31775	OS02G0117200 PROTEIN	coord: 6..198
IPR005516	Remorin, C-terminal	PFAM	PF03763	Remorin_C	coord: 87..191 e-value: 8.9E-32 score: 109.1
IPR005518	Remorin, N-terminal	PFAM	PF03766	Remorin_N	coord: 27..83 e-value: 1.9E-22 score: 79.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002472.1	Sed0002472.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010033	response to organic substance
biological_process	GO:1901700	response to oxygen-containing compound
biological_process	GO:0006950	response to stress