Sed0002464 (gene) Chayote v1

Overview


Name	Sed0002464
Type	gene
Organism	Sechium edule (Chayote v1)
Description	U-box domain-containing protein 45
Location	LG01: 4299719 .. 4302507 (+)
RNA-Seq Expression	Sed0002464
Synteny	Sed0002464

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTATAAATGATATTAATACAGTGAAGAAGAAAAGAAGAGAGTTAGAGAGCAAGAAGATGAAGCAAGAAGATGAAGAAGAAGGAGGAGGAAGGTTCGAATTGGGCAGAAATTCAGAATCCACATTGAATCAACGGAAGCAAATCCTGATCTTCCAGATTTCTCAGAAGCTCATCCATGGCGACCTCCATTCCCGAATCGAAGCTGCCCGAGATTTGAGAAACCTCGCCCGCAAATCTTCCCCCAAATCCCGCTCCAACCTCGGCGCTTCCACTCTCATTCAGCCCCTCGTTTGCATGCTTCTCTCCCCCAATCTCGACGCTCGTGAGGCCTCCCTTCTTGCCCTCCTCAACCTCGCCTCCCGCAACGAACGGTACTTTCTGATCTTGCCCTAATTGATGTTCTATGTAGCTGCATTGAGATCTGATTCAACCATGAACGGGTCTGCTAAAGGATTAGGATATTGGAATTGTATCGCAGTGTCGGAGTGTGAAATGGGTTCTTTTGCTATACTCTGCTCGATTCATATTCGAATCCATTTAGCACAAATCTGATCCTTTACTCTGATTCTGTTGTCTTAGGTGCAGTATTCTTGACAGCTCCGTTTTGTTGTTTAGGATTTACTAGTTCGATTGGACTGGGAGGATTAGTAGATTGTTCATTTGCCTGTTGAATGCATTTCTAGGAATATGACTGCATGGACTATTAGGTTTGGAAACTTCCCCCCAGATTTTGGGTATTTCTGGGAACAAGCTGATGATTGTGGTTGGGACGAGCATGTTTTTTTGAGTTTAACCATTGGGAGGCATAGATGAAACTATTGATGATGCATATTGTATACTTTTTTTTTTTTTTTCATATCGATGAGTGTCCACGCCATTGTATGCACAACTTGACTATTCTTGGGAACAACCAACTTTCCGAACTACTTTTGGTAAGAAACTAGTAGAAAATTAATTCCCAAGTAGGTGACTATTACGGATTAATTATTAAACTCATTTTTTTCAAACATTTCATGATTCTCAAGGCCCTTATCCATTAAGTTATACATTTTAGGATTCTCAAGGCCTTTATTTGACCACTACGCCAACCCATGATAGTTATCCTTTTTTTGACCACTTAGTTTCGATGGAGATTCCTCGGCATACAAGTTTTTTCTCTCGGATGTATAGTTGATTCATGAGATAATCCCTCGGATGTGCATGCCATCCCTCCACATTTAGGTCTTAAAAGTTGGGTGTTCAACTTCTTTATAGTTCCAAATTTATATTTACCATATTATCTCATTGTAAAAAAAGTTCAGAATTTGACCCACGACCTCTGTAACACTTTCATTTTTATCAATGAAAATGATATTTGTTTTTTACCAAAGAAAAAAAACATTAAGACTTAAGTTTTGTTTATTTAGATTTTAATGGCTACAATTTAAATCTGGTTATACACATTTCATTCAGTCTTCTATTCTTTTTCCTCTCGTAACTTAGTGTTATTTAAACAAAGAACCATTTGGGTGACATGTTTCTGTCATGTTTACAGATGAATATACTGTTGTTCCATCATCTCATATGATTCTGATTATTTCTTTCAATATTATCAGGAACAAGATAAAAATAGTTGCAGCTGGTGCCATTCCCCCTCTTCTGGAGTTGCTCAAACTTCAAAATCTTAGTTTGAGGGAATTAGCCACTGCAGCAATCCTGACCTTATCAGCTGCTGCATCGAATAAACCGGTTATCTTGTCTGCTGGTGCAACATCTCTTCTGGTTCAGATTCTCATTTCTGGAAGTGTCCAAGCTAAAGTCGATGCAGTGACTGCGCTGTACTATTTATCCGCCTGCACTGAAAGTGAGAATGGCTCTATGATGATGCTTGACCCAAGAGCAGTTGTCCCTCTTATTGATCTCCTCAAAGATTGCAAGAAACATTCGAAGTTTGCAGAAAAAACAACGTCCCTGCTTCAGATAATTTCCAACTCTGATGAAGGGCGAACTGCGATCGCCAATTCAGATGGCGGAATACTAACTCTAGTACAAACAGTTGAAGACGGATCTCTTGTGAGCACCGAGCACGCAGTGGGAGTTTTGCTCTCCATGTGCCAGAGTTGCCGAGAGACATACCGCGAACCCATTTTGAAAGAAGGTGCAATCCCTGGCCTTTTAAGACTCACAGTAGAGGGCACAGCTGAAGCTCAAGAGAGAGCTCGCAGGCTTCTGGATTTGCTTAGAGATTCTCCTCAGGAAAAGAGGATGAGCTCCACAGATCTGGAGAGAATAGTTTACAAAATCGCTGCAGAAGTCGACGGTGTAGGACAAGCAGCCGAGACTGCCAAAAGATTAATGCAGGAAATGGTTCAAAGGAGATTAAACACATCGTAAGCCGCATCCAGAGCGTTCTCGTGTTTGTACATTTTCATAGATGTTTCTTGAAATTTCACTCTTTCTTCTTCCAGGAGGTAAGTTTTTGGGAGATAGGTTGAAGTTAATTAGGATCTGGTTTGGCTTGGCCAAGGTAAAATTGGGAAATAGAAGTCAAAGAAAAGAAACAAAAGGAAGTCAATTGAACTTGGGATTTTCACTGAAGTTAACTCCATTGCTGATGATGTTAGTTACATTATTAGTAGATTGTATATTTGTACTCTGATCTCTCTGGTACATAAAGATTATCATTTTGTACATGAAGAGATCTCTTCTGATCTCATTAGTTTCGAGTAAACATTTTCTTACGACAAGAGTAATAACTCAACTAGCATAGGTGTCAATTTTAGATGAATTTCATTTTGCTATCATCAGGG

mRNA sequence

GTTATAAATGATATTAATACAGTGAAGAAGAAAAGAAGAGAGTTAGAGAGCAAGAAGATGAAGCAAGAAGATGAAGAAGAAGGAGGAGGAAGGTTCGAATTGGGCAGAAATTCAGAATCCACATTGAATCAACGGAAGCAAATCCTGATCTTCCAGATTTCTCAGAAGCTCATCCATGGCGACCTCCATTCCCGAATCGAAGCTGCCCGAGATTTGAGAAACCTCGCCCGCAAATCTTCCCCCAAATCCCGCTCCAACCTCGGCGCTTCCACTCTCATTCAGCCCCTCGTTTGCATGCTTCTCTCCCCCAATCTCGACGCTCGTGAGGCCTCCCTTCTTGCCCTCCTCAACCTCGCCTCCCGCAACGAACGGAACAAGATAAAAATAGTTGCAGCTGGTGCCATTCCCCCTCTTCTGGAGTTGCTCAAACTTCAAAATCTTAGTTTGAGGGAATTAGCCACTGCAGCAATCCTGACCTTATCAGCTGCTGCATCGAATAAACCGGTTATCTTGTCTGCTGGTGCAACATCTCTTCTGGTTCAGATTCTCATTTCTGGAAGTGTCCAAGCTAAAGTCGATGCAGTGACTGCGCTGTACTATTTATCCGCCTGCACTGAAAGTGAGAATGGCTCTATGATGATGCTTGACCCAAGAGCAGTTGTCCCTCTTATTGATCTCCTCAAAGATTGCAAGAAACATTCGAAGTTTGCAGAAAAAACAACGTCCCTGCTTCAGATAATTTCCAACTCTGATGAAGGGCGAACTGCGATCGCCAATTCAGATGGCGGAATACTAACTCTAGTACAAACAGTTGAAGACGGATCTCTTGTGAGCACCGAGCACGCAGTGGGAGTTTTGCTCTCCATGTGCCAGAGTTGCCGAGAGACATACCGCGAACCCATTTTGAAAGAAGGTGCAATCCCTGGCCTTTTAAGACTCACAGTAGAGGGCACAGCTGAAGCTCAAGAGAGAGCTCGCAGGCTTCTGGATTTGCTTAGAGATTCTCCTCAGGAAAAGAGGATGAGCTCCACAGATCTGGAGAGAATAGTTTACAAAATCGCTGCAGAAGTCGACGGTGTAGGACAAGCAGCCGAGACTGCCAAAAGATTAATGCAGGAAATGGTTCAAAGGAGATTAAACACATCGTAAGCCGCATCCAGAGCGTTCTCGTGTTTGTACATTTTCATAGATGTTTCTTGAAATTTCACTCTTTCTTCTTCCAGGAGGTAAGTTTTTGGGAGATAGGTTGAAGTTAATTAGGATCTGGTTTGGCTTGGCCAAGGTAAAATTGGGAAATAGAAGTCAAAGAAAAGAAACAAAAGGAAGTCAATTGAACTTGGGATTTTCACTGAAGTTAACTCCATTGCTGATGATGTTAGTTACATTATTAGTAGATTGTATATTTGTACTCTGATCTCTCTGGTACATAAAGATTATCATTTTGTACATGAAGAGATCTCTTCTGATCTCATTAGTTTCGAGTAAACATTTTCTTACGACAAGAGTAATAACTCAACTAGCATAGGTGTCAATTTTAGATGAATTTCATTTTGCTATCATCAGGG

Coding sequence (CDS)

ATGAAGCAAGAAGATGAAGAAGAAGGAGGAGGAAGGTTCGAATTGGGCAGAAATTCAGAATCCACATTGAATCAACGGAAGCAAATCCTGATCTTCCAGATTTCTCAGAAGCTCATCCATGGCGACCTCCATTCCCGAATCGAAGCTGCCCGAGATTTGAGAAACCTCGCCCGCAAATCTTCCCCCAAATCCCGCTCCAACCTCGGCGCTTCCACTCTCATTCAGCCCCTCGTTTGCATGCTTCTCTCCCCCAATCTCGACGCTCGTGAGGCCTCCCTTCTTGCCCTCCTCAACCTCGCCTCCCGCAACGAACGGAACAAGATAAAAATAGTTGCAGCTGGTGCCATTCCCCCTCTTCTGGAGTTGCTCAAACTTCAAAATCTTAGTTTGAGGGAATTAGCCACTGCAGCAATCCTGACCTTATCAGCTGCTGCATCGAATAAACCGGTTATCTTGTCTGCTGGTGCAACATCTCTTCTGGTTCAGATTCTCATTTCTGGAAGTGTCCAAGCTAAAGTCGATGCAGTGACTGCGCTGTACTATTTATCCGCCTGCACTGAAAGTGAGAATGGCTCTATGATGATGCTTGACCCAAGAGCAGTTGTCCCTCTTATTGATCTCCTCAAAGATTGCAAGAAACATTCGAAGTTTGCAGAAAAAACAACGTCCCTGCTTCAGATAATTTCCAACTCTGATGAAGGGCGAACTGCGATCGCCAATTCAGATGGCGGAATACTAACTCTAGTACAAACAGTTGAAGACGGATCTCTTGTGAGCACCGAGCACGCAGTGGGAGTTTTGCTCTCCATGTGCCAGAGTTGCCGAGAGACATACCGCGAACCCATTTTGAAAGAAGGTGCAATCCCTGGCCTTTTAAGACTCACAGTAGAGGGCACAGCTGAAGCTCAAGAGAGAGCTCGCAGGCTTCTGGATTTGCTTAGAGATTCTCCTCAGGAAAAGAGGATGAGCTCCACAGATCTGGAGAGAATAGTTTACAAAATCGCTGCAGAAGTCGACGGTGTAGGACAAGCAGCCGAGACTGCCAAAAGATTAATGCAGGAAATGGTTCAAAGGAGATTAAACACATCGTAA

Protein sequence

MKQEDEEEGGGRFELGRNSESTLNQRKQILIFQISQKLIHGDLHSRIEAARDLRNLARKSSPKSRSNLGASTLIQPLVCMLLSPNLDAREASLLALLNLASRNERNKIKIVAAGAIPPLLELLKLQNLSLRELATAAILTLSAAASNKPVILSAGATSLLVQILISGSVQAKVDAVTALYYLSACTESENGSMMMLDPRAVVPLIDLLKDCKKHSKFAEKTTSLLQIISNSDEGRTAIANSDGGILTLVQTVEDGSLVSTEHAVGVLLSMCQSCRETYREPILKEGAIPGLLRLTVEGTAEAQERARRLLDLLRDSPQEKRMSSTDLERIVYKIAAEVDGVGQAAETAKRLMQEMVQRRLNTS

Homology

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BLAST of Sed0002464 vs. NCBI nr
Match: XP_022140786.1 (U-box domain-containing protein 45 [Momordica charantia])

HSP 1 Score: 592.4 bits (1526), Expect = 2.6e-165
Identity = 328/362 (90.61%), Postives = 343/362 (94.75%), Query Frame = 0


Query: 1   MKQEDEEEGGGRFELGRNSESTLNQRKQILIFQISQKLIHGDLHSRIEAARDLRNLARKS 60
           MKQ++ EE        R+S+S LN R QILIFQ+SQKLIHGDLHSRI+AA+DLRNLARKS
Sbjct: 1   MKQDEREEPEEEIGFQRDSDS-LNHRNQILIFQLSQKLIHGDLHSRIQAAKDLRNLARKS 60

Query: 61  SPKSRSNLGASTLIQPLVCMLLSPNLDAREASLLALLNLASRNERNKIKIVAAGAIPPLL 120
           SPKSRSNLGAS+LIQPLVCMLLSP+LDAREASLLALLNLASRNERNKIKIVAAGA+PPLL
Sbjct: 61  SPKSRSNLGASSLIQPLVCMLLSPSLDAREASLLALLNLASRNERNKIKIVAAGAVPPLL 120

Query: 121 ELLKLQNLSLRELATAAILTLSAAASNKPVILSAGATSLLVQILISGSVQAKVDAVTALY 180
           ELLK QNLSLRELATAAILTLSAAASNKPVILSAGA SLLVQILISGSVQAKVDAVTALY
Sbjct: 121 ELLKFQNLSLRELATAAILTLSAAASNKPVILSAGAASLLVQILISGSVQAKVDAVTALY 180

Query: 181 YLSACTESENGSMMMLDPRAVVPLIDLLKDCKKHSKFAEKTTSLLQIISNSDEGRTAIAN 240
           YLSAC ES+N   MMLDPRAV PLIDLLK+CKKHSKFAEKTTSLLQIISNSDEGRTAI+N
Sbjct: 181 YLSACNESDN-CPMMLDPRAVAPLIDLLKECKKHSKFAEKTTSLLQIISNSDEGRTAISN 240

Query: 241 SDGGILTLVQTVEDGSLVSTEHAVGVLLSMCQSCRETYREPILKEGAIPGLLRLTVEGTA 300
           SDGGILTLVQTVEDGSLVSTEHAVGVLLS+CQSCRETYREPILKEGAIPGLLRLTVEGTA
Sbjct: 241 SDGGILTLVQTVEDGSLVSTEHAVGVLLSLCQSCRETYREPILKEGAIPGLLRLTVEGTA 300

Query: 301 EAQERARRLLDLLRDSPQEKRMSSTDLERIVYKIAAEVDGVGQAAETAKRLMQEMVQRRL 360
           EAQERARRLLDLLRDSPQEKRMSSTDLER+VYKIAAEVDGVGQAAETAKRLMQEMVQRRL
Sbjct: 301 EAQERARRLLDLLRDSPQEKRMSSTDLERMVYKIAAEVDGVGQAAETAKRLMQEMVQRRL 360

Query: 361 NT 363
           NT
Sbjct: 361 NT 360

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BLAST of Sed0002464 vs. NCBI nr
Match: XP_022943890.1 (U-box domain-containing protein 45 [Cucurbita moschata] >XP_022943892.1 U-box domain-containing protein 45 [Cucurbita moschata] >KAG6570950.1 U-box domain-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010789.1 U-box domain-containing protein 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 587.4 bits (1513), Expect = 8.4e-164
Identity = 329/363 (90.63%), Postives = 341/363 (93.94%), Query Frame = 0


Query: 1   MKQEDEEEGGGRFELGRNSESTLNQRKQILIFQISQKLIHGDLHSRIEAARDLRNLARKS 60
           MKQE  EE        R+SE T N +KQILIFQ+SQ+LIHGDL SRIEAA+DLR LARKS
Sbjct: 1   MKQEGREEQEDEIVFDRDSE-TSNHKKQILIFQLSQRLIHGDLLSRIEAAKDLRKLARKS 60

Query: 61  SPKSRSNLGASTLIQPLVCMLLSPNLDAREASLLALLNLASRNERNKIKIVAAGAIPPLL 120
           SPKSRSNLGAS+LIQPLVCMLLSPNLDAREASLLALLNLASRNERNKIKIVAAGAIPPLL
Sbjct: 61  SPKSRSNLGASSLIQPLVCMLLSPNLDAREASLLALLNLASRNERNKIKIVAAGAIPPLL 120

Query: 121 ELLKLQNLSLRELATAAILTLSAAASNKPVILSAGATSLLVQILISGSVQAKVDAVTALY 180
           ELLK QNLSLRELATAAILTLSAAASNKPVILSAGATSLLVQILISGSVQAKVDAVTALY
Sbjct: 121 ELLKFQNLSLRELATAAILTLSAAASNKPVILSAGATSLLVQILISGSVQAKVDAVTALY 180

Query: 181 YLSACTESENGSMMMLDPRAVVPLIDLLKDCKKHSKFAEKTTSLLQIISNSDEGRTAIAN 240
           YLSACTE+EN   MMLDP AV PLIDLLK+CKKHSKFAEKTTSLLQIISNSDEGRTAI+N
Sbjct: 181 YLSACTENEN-CPMMLDPGAVAPLIDLLKECKKHSKFAEKTTSLLQIISNSDEGRTAISN 240

Query: 241 SDGGILTLVQTVEDGSLVSTEHAVGVLLSMCQSCRETYREPILKEGAIPGLLRLTVEGTA 300
           SDGGILTLVQTVEDGSLVSTE+AVGVLLSMCQSCRETYREPILKEGAIPGLLRLTVEGTA
Sbjct: 241 SDGGILTLVQTVEDGSLVSTENAVGVLLSMCQSCRETYREPILKEGAIPGLLRLTVEGTA 300

Query: 301 EAQERARRLLDLLRDSPQEKRMSSTDLERIVYKIAAEVDGVGQAAETAKRLMQEMVQRRL 360
           EAQ+RARRLLDLLRDSPQEKRMSSTDLERI YKIAAEVDGVGQAAETAKRLMQEMVQRRL
Sbjct: 301 EAQDRARRLLDLLRDSPQEKRMSSTDLERIAYKIAAEVDGVGQAAETAKRLMQEMVQRRL 360

Query: 361 NTS 364
           NT+
Sbjct: 361 NTA 361

[Close]

BLAST of Sed0002464 vs. NCBI nr
Match: XP_038901493.1 (U-box domain-containing protein 45 [Benincasa hispida])

HSP 1 Score: 587.4 bits (1513), Expect = 8.4e-164
Identity = 329/364 (90.38%), Postives = 341/364 (93.68%), Query Frame = 0


Query: 1   MKQED--EEEGGGRFELGRNSESTLNQRKQILIFQISQKLIHGDLHSRIEAARDLRNLAR 60
           MKQE+  EE+  G   L  +SE T N RKQ+LIF +SQ+LIHGDLHSRIEAA+DLR LAR
Sbjct: 1   MKQEEGREEQEDGIGALETDSE-TSNHRKQLLIFHLSQRLIHGDLHSRIEAAKDLRKLAR 60

Query: 61  KSSPKSRSNLGASTLIQPLVCMLLSPNLDAREASLLALLNLASRNERNKIKIVAAGAIPP 120
           KSSPKSRSNLGAS+LIQPLVCMLLSPNLDAREASLLALLNLASRNERNKIKIVAAGAIPP
Sbjct: 61  KSSPKSRSNLGASSLIQPLVCMLLSPNLDAREASLLALLNLASRNERNKIKIVAAGAIPP 120

Query: 121 LLELLKLQNLSLRELATAAILTLSAAASNKPVILSAGATSLLVQILISGSVQAKVDAVTA 180
           LLELLK QNLSLRELATAAILTLSAA SNKPVILSAGATSLLVQILISGSVQAKVDAVTA
Sbjct: 121 LLELLKFQNLSLRELATAAILTLSAAKSNKPVILSAGATSLLVQILISGSVQAKVDAVTA 180

Query: 181 LYYLSACTESENGSMMMLDPRAVVPLIDLLKDCKKHSKFAEKTTSLLQIISNSDEGRTAI 240
           LYYLS+CTESEN S MMLDPRAV PLIDLLKDCKKHSKFAEKTTSLLQIISNS+EGR AI
Sbjct: 181 LYYLSSCTESENSS-MMLDPRAVAPLIDLLKDCKKHSKFAEKTTSLLQIISNSEEGRIAI 240

Query: 241 ANSDGGILTLVQTVEDGSLVSTEHAVGVLLSMCQSCRETYREPILKEGAIPGLLRLTVEG 300
           +NSDGGILTLVQTVEDGSLVSTEHAVGVLLSMCQSCR TYREPILKEGAIPGLLRLTVEG
Sbjct: 241 SNSDGGILTLVQTVEDGSLVSTEHAVGVLLSMCQSCRATYREPILKEGAIPGLLRLTVEG 300

Query: 301 TAEAQERARRLLDLLRDSPQEKRMSSTDLERIVYKIAAEVDGVGQAAETAKRLMQEMVQR 360
           T EAQERARRLLDLLRDSPQEKRMSS DLERIVYKIAAEVDG+GQAAETAKRLMQEMVQR
Sbjct: 301 TTEAQERARRLLDLLRDSPQEKRMSSADLERIVYKIAAEVDGIGQAAETAKRLMQEMVQR 360

Query: 361 RLNT 363
           RLNT
Sbjct: 361 RLNT 362

[Close]

BLAST of Sed0002464 vs. NCBI nr
Match: XP_004139995.1 (U-box domain-containing protein 45 [Cucumis sativus])

HSP 1 Score: 586.6 bits (1511), Expect = 1.4e-163
Identity = 326/366 (89.07%), Postives = 340/366 (92.90%), Query Frame = 0


Query: 1   MKQEDEEEGGGR----FELGRNSESTLNQRKQILIFQISQKLIHGDLHSRIEAARDLRNL 60
           MKQE+ EE        F+   +  S  N RKQ LIFQ+SQ+LIHGDLHSRIEAA+DLRNL
Sbjct: 1   MKQEEREEKEVEDEIVFDTSDSQISNSNHRKQFLIFQLSQRLIHGDLHSRIEAAKDLRNL 60

Query: 61  ARKSSPKSRSNLGASTLIQPLVCMLLSPNLDAREASLLALLNLASRNERNKIKIVAAGAI 120
           ARKSSPKSRSNLGAS+LIQPLVCMLLSPNLDAREASLLALLNLASRNERNKIKIVAAGAI
Sbjct: 61  ARKSSPKSRSNLGASSLIQPLVCMLLSPNLDAREASLLALLNLASRNERNKIKIVAAGAI 120

Query: 121 PPLLELLKLQNLSLRELATAAILTLSAAASNKPVILSAGATSLLVQILISGSVQAKVDAV 180
           PPLLELLKLQNLSLRELATAAILTLSAA SNKPVILSAGATSLLVQILISGSVQAKVDAV
Sbjct: 121 PPLLELLKLQNLSLRELATAAILTLSAATSNKPVILSAGATSLLVQILISGSVQAKVDAV 180

Query: 181 TALYYLSACTESENGSMMMLDPRAVVPLIDLLKDCKKHSKFAEKTTSLLQIISNSDEGRT 240
           TALYYLSACTESE+ S MMLDP AV PLIDLLK+CKKHSKFAEKTTSLLQIISNS+EGRT
Sbjct: 181 TALYYLSACTESESSS-MMLDPGAVAPLIDLLKECKKHSKFAEKTTSLLQIISNSEEGRT 240

Query: 241 AIANSDGGILTLVQTVEDGSLVSTEHAVGVLLSMCQSCRETYREPILKEGAIPGLLRLTV 300
           AI+NSDGGILTLVQT+EDGSLVSTEHAVGVLLSMCQ+CRETYREPILKEGAIPGLLRLTV
Sbjct: 241 AISNSDGGILTLVQTIEDGSLVSTEHAVGVLLSMCQTCRETYREPILKEGAIPGLLRLTV 300

Query: 301 EGTAEAQERARRLLDLLRDSPQEKRMSSTDLERIVYKIAAEVDGVGQAAETAKRLMQEMV 360
           EGT EAQERARRLLDLLRDSPQEKRMSS DLERIVYKIAAEVDG+ QAAETAKRLMQEMV
Sbjct: 301 EGTTEAQERARRLLDLLRDSPQEKRMSSADLERIVYKIAAEVDGIDQAAETAKRLMQEMV 360

Query: 361 QRRLNT 363
           QRRLNT
Sbjct: 361 QRRLNT 365

[Close]

BLAST of Sed0002464 vs. NCBI nr
Match: XP_023511820.1 (U-box domain-containing protein 45 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 584.7 bits (1506), Expect = 5.4e-163
Identity = 328/363 (90.36%), Postives = 339/363 (93.39%), Query Frame = 0


Query: 1   MKQEDEEEGGGRFELGRNSESTLNQRKQILIFQISQKLIHGDLHSRIEAARDLRNLARKS 60
           MKQE  EE        R+SE T N +KQILIFQ+SQ+LIHGDL SRIEAA+DLR LARKS
Sbjct: 1   MKQEGREEQEDEIVFDRDSE-TSNHKKQILIFQLSQRLIHGDLLSRIEAAKDLRKLARKS 60

Query: 61  SPKSRSNLGASTLIQPLVCMLLSPNLDAREASLLALLNLASRNERNKIKIVAAGAIPPLL 120
           SPKSRSNLGAS+LIQPLVCMLLSPNLDAREASLLALLNLASRNERNKIKIVAAGAIPPLL
Sbjct: 61  SPKSRSNLGASSLIQPLVCMLLSPNLDAREASLLALLNLASRNERNKIKIVAAGAIPPLL 120

Query: 121 ELLKLQNLSLRELATAAILTLSAAASNKPVILSAGATSLLVQILISGSVQAKVDAVTALY 180
           ELLK QNLSLRELATAAILTLSAAASNKPVILSAGATSLLVQILISGSVQAKVDAVTALY
Sbjct: 121 ELLKFQNLSLRELATAAILTLSAAASNKPVILSAGATSLLVQILISGSVQAKVDAVTALY 180

Query: 181 YLSACTESENGSMMMLDPRAVVPLIDLLKDCKKHSKFAEKTTSLLQIISNSDEGRTAIAN 240
           YLSACTE EN   MMLDP AV PLIDLLK+CKKHSKFAEKTTSLLQIISNSDEGRTAI+N
Sbjct: 181 YLSACTEHEN-CPMMLDPGAVAPLIDLLKECKKHSKFAEKTTSLLQIISNSDEGRTAISN 240

Query: 241 SDGGILTLVQTVEDGSLVSTEHAVGVLLSMCQSCRETYREPILKEGAIPGLLRLTVEGTA 300
           SDGGILTLVQTVEDGSLVSTE+AVGVLLSMCQSCRETYREPILKEGAIPGLLRLTVEGTA
Sbjct: 241 SDGGILTLVQTVEDGSLVSTENAVGVLLSMCQSCRETYREPILKEGAIPGLLRLTVEGTA 300

Query: 301 EAQERARRLLDLLRDSPQEKRMSSTDLERIVYKIAAEVDGVGQAAETAKRLMQEMVQRRL 360
           EAQ+RARRLLDLLRDSPQEKRMSSTDLERI YKIAAEVDGVGQA ETAKRLMQEMVQRRL
Sbjct: 301 EAQDRARRLLDLLRDSPQEKRMSSTDLERIAYKIAAEVDGVGQALETAKRLMQEMVQRRL 360

Query: 361 NTS 364
           NT+
Sbjct: 361 NTA 361

[Close]

BLAST of Sed0002464 vs. ExPASy Swiss-Prot
Match: Q8VZ40 (U-box domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=PUB14 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.1e-22
Identity = 105/304 (34.54%), Postives = 162/304 (53.29%), Query Frame = 0


Query: 14  ELGRNSESTLNQRKQILIFQISQKLIHGDLHSRIEAARDLRNLARKSSPKSRSNLGASTL 73
           ++G +S S  +   +  +  + +KL +G    +  AA +LR LA K +  +R  +  +  
Sbjct: 333 KIGGSSSSDCD---RTFVLSLLEKLANGTTEQQRAAAGELRLLA-KRNVDNRVCIAEAGA 392

Query: 74  IQPLVCMLLSPNLDAREASLLALLNLASRNERNKIKIVAAGAIPPLLELLKLQNLSLREL 133
           I  LV +L SP+   +E S+ ALLNL S NE NK  IV AGAI  ++E+LK  ++  RE 
Sbjct: 393 IPLLVELLSSPDPRTQEHSVTALLNL-SINEGNKGAIVDAGAITDIVEVLKNGSMEAREN 452

Query: 134 ATAAILTLSAAASNKPVILSAGATSLLVQILISGSVQAKVDAVTALYYLSACTESENGSM 193
           A A + +LS    NK  I +AGA   L+ +L  G+ + K DA TA++ L  C    N S 
Sbjct: 453 AAATLFSLSVIDENKVAIGAAGAIQALISLLEEGTRRGKKDAATAIFNL--CIYQGNKS- 512

Query: 194 MMLDPRAVVPLIDLLKDCKKHSKFAEKTTSLLQIISNSDEGRTAIANSDGGILTLVQTVE 253
             +    V PL  LLKD        ++  ++L I+S + EG+TAIA ++  I  LV+ + 
Sbjct: 513 RAVKGGIVDPLTRLLKDA--GGGMVDEALAILAILSTNQEGKTAIAEAE-SIPVLVEIIR 572

Query: 254 DGSLVSTEHAVGVLLSMCQSCRETYREPILKE-GAIPGLLRLTVEGTAEAQERARRLLDL 313
            GS  + E+A  +L  +C    E  R  + +E GA   L  LT  GT  A+ +A  LL+L
Sbjct: 573 TGSPRNRENAAAILWYLCIGNIE--RLNVAREVGADVALKELTENGTDRAKRKAASLLEL 623

Query: 314 LRDS 317
           ++ +
Sbjct: 633 IQQT 623

[Close]

BLAST of Sed0002464 vs. ExPASy Swiss-Prot
Match: Q8GWV5 (U-box domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PUB3 PE=2 SV=2)

HSP 1 Score: 108.6 bits (270), Expect = 1.5e-22
Identity = 97/284 (34.15%), Postives = 156/284 (54.93%), Query Frame = 0


Query: 33  QISQKLIHGDLHSRIEAARDLRNLARKSSPKSRSNLGASTLIQPLVCMLLSPNLDAREAS 92
           ++ + L  G    +  AA ++R+L   +S ++R ++G    I PL+ +L S     +E +
Sbjct: 476 KLVEDLKSGSNKVKTAAAAEIRHLT-INSIENRVHIGRCGAITPLLSLLYSEEKLTQEHA 535

Query: 93  LLALLNLASRNERNKIKIVAAGAIPPLLELLKLQNLSLRELATAAILTLSAAASNKPVI- 152
           + ALLNL S +E NK  IV  GAI PL+ +L   N   +E + A++ +LS    N+  I 
Sbjct: 536 VTALLNL-SISELNKAMIVEVGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIG 595

Query: 153 LSAGATSLLVQILISGSVQAKVDAVTALYYLSACTESENGSMMMLDPRAVVPLIDLLKDC 212
            S  A   LV +L  G+ + K DA +AL+ LS    + +    ++  +AV  L++LL   
Sbjct: 596 QSNAAIQALVNLLGKGTFRGKKDAASALFNLSI---THDNKARIVQAKAVKYLVELL--- 655

Query: 213 KKHSKFAEKTTSLLQIISNSDEGRTAIANSDGGILTLVQTVEDGSLVSTEHAVGVLLSMC 272
               +  +K  +LL  +S   EGR AI   +GGI  LV+TV+ GS    E+A  VLL +C
Sbjct: 656 DPDLEMVDKAVALLANLSAVGEGRQAIVR-EGGIPLLVETVDLGSQRGKENAASVLLQLC 715

Query: 273 QSCRETYREPILKEGAIPGLLRLTVEGTAEAQERARRLLDLLRD 316
            +  + +   +L+EGAIP L+ L+  GT  A+E+A++LL   R+
Sbjct: 716 LNSPK-FCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLLSHFRN 749

[Close]

BLAST of Sed0002464 vs. ExPASy Swiss-Prot
Match: Q5XEZ8 (U-box domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PUB2 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.2e-19
Identity = 96/280 (34.29%), Postives = 144/280 (51.43%), Query Frame = 0


Query: 43  LHSRIEAARDLRNLARKSSPKSRSNLGASTLIQPLVCMLLSPNLDAREASLLALLNLASR 102
           L ++ EA   +R LAR S+  +R  +     I  LV +L S +   +  ++  LLNL S 
Sbjct: 435 LDTQREATARIRILARNST-DNRIVIARCEAIPSLVSLLYSTDERIQADAVTCLLNL-SI 494

Query: 103 NERNKIKIVAAGAIPPLLELLKLQNLSLRELATAAIL-TLSAAASNKPVILSAGATSLLV 162
           N+ NK  I  +GAI PL+ +LK   L   +  +AA L +LS     K  I  AGA   LV
Sbjct: 495 NDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGEAGAIEPLV 554

Query: 163 QILISGSVQAKVDAVTALYYLSACTESENGSMMMLDPRAVVPLIDLLKDCKKHSKFAEKT 222
            +L SGS+  K DA TAL+ LS   E++     +++  AV  L++L+          EK 
Sbjct: 555 DLLGSGSLSGKKDAATALFNLSIHHENKT---KVIEAGAVRYLVELMDPA---FGMVEKA 614

Query: 223 TSLLQIISNSDEGRTAIANSDGGILTLVQTVEDGSLVSTEHAVGVLLSMCQSCRETYREP 282
             +L  ++   EG+ AI   +GGI  LV+ VE GS    E+A   LL +C    + +   
Sbjct: 615 VVVLANLATVREGKIAI-GEEGGIPVLVEVVELGSARGKENATAALLQLCTHSPK-FCNN 674

Query: 283 ILKEGAIPGLLRLTVEGTAEAQERARRLLDLLRDSPQEKR 322
           +++EG IP L+ LT  GTA  +E+A+ LL   +   Q  +
Sbjct: 675 VIREGVIPPLVALTKSGTARGKEKAQNLLKYFKAHRQSNQ 704

[Close]

BLAST of Sed0002464 vs. ExPASy Swiss-Prot
Match: Q681N2 (U-box domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=PUB15 PE=2 SV=2)

HSP 1 Score: 98.2 bits (243), Expect = 2.0e-19
Identity = 94/300 (31.33%), Postives = 158/300 (52.67%), Query Frame = 0


Query: 19  SESTLNQRKQILIFQISQKLIHGDLHSRIEAARDLRNLARKSSPKSRSNLGASTLIQPLV 78
           S  + N++K  +   + + L    L  +  + + +R LAR+ +P++R  +  +  I  LV
Sbjct: 370 SPDSQNEQKDEVSLLV-EALSSSQLEEQRRSVKQMRLLARE-NPENRVLIANAGAIPLLV 429

Query: 79  CMLLSPNLDAREASLLALLNLASRNERNKIKIVAAGAIPPLLELLKLQNLSLRELATAAI 138
            +L  P+   +E ++  LLNL S +E NK  I   GAIP ++E+L+  N   RE + AA+
Sbjct: 430 QLLSYPDSGIQENAVTTLLNL-SIDEVNKKLISNEGAIPNIIEILENGNREARENSAAAL 489

Query: 139 LTLSAAASNKPVILSAGATSLLVQILISGSVQAKVDAVTALYYLSACTESENGSMMMLDP 198
            +LS    NK  I  +     LV +L  G+++ K DA+TAL+ LS  + ++  +   +D 
Sbjct: 490 FSLSMLDENKVTIGLSNGIPPLVDLLQHGTLRGKKDALTALFNLSLNSANKGRA---IDA 549

Query: 199 RAVVPLIDLLKDCKKHSKFAEKTTSLLQIISNSDEGRTAIANSDGGILTLVQTVEDGSLV 258
             V PL++LLKD  K+    ++  S+L ++++  EGR AI      I TLV+ +  G+  
Sbjct: 550 GIVQPLLNLLKD--KNLGMIDEALSILLLLASHPEGRQAIGQL-SFIETLVEFIRQGTPK 609

Query: 259 STEHAVGVLLSMCQSCRETYREPILKEGAIPGLLRLTVEGTAEAQERARRLLDLLRDSPQ 318
           + E A  VLL +  S   ++    L+ G    L+ +T  GT  AQ +A  L+ L+  S Q
Sbjct: 610 NKECATSVLLEL-GSNNSSFILAALQFGVYEYLVEITTSGTNRAQRKANALIQLISKSEQ 659

[Close]

BLAST of Sed0002464 vs. ExPASy Swiss-Prot
Match: Q8GUG9 (U-box domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=PUB11 PE=2 SV=2)

HSP 1 Score: 97.4 bits (241), Expect = 3.4e-19
Identity = 89/300 (29.67%), Postives = 163/300 (54.33%), Query Frame = 0


Query: 22  TLNQRKQILIFQISQKLIHGDLHSRIEAARDLRNLARKSSPKSRSNLGASTLIQPLVCML 81
           T N     +I  + Q+L       R  A  ++R+L+++S+  +R  +  +  I  LV +L
Sbjct: 324 TKNSGDMSVIRALVQRLSSRSTEDRRNAVSEIRSLSKRST-DNRILIAEAGAIPVLVNLL 383

Query: 82  LSPNLDAREASLLALLNLASRNERNKIKIVAAGAIPPLLELLKLQNLSLRELATAAILTL 141
            S ++  +E ++  +LNL S  E NK  I+ AGA+  ++++L+   +  RE A A + +L
Sbjct: 384 TSEDVATQENAITCVLNL-SIYENNKELIMFAGAVTSIVQVLRAGTMEARENAAATLFSL 443

Query: 142 SAAASNKPVILSAGATSLLVQILISGSVQAKVDAVTALYYLSACTESENGSMMMLDPRAV 201
           S A  NK +I  +GA   LV +L +G+ + K DA TAL+ L  C    N     +    V
Sbjct: 444 SLADENKIIIGGSGAIPALVDLLENGTPRGKKDAATALFNL--CIYHGNKG-RAVRAGIV 503

Query: 202 VPLIDLLKDCKKHSKFAEKTTSLLQIISNSDEGRTAI--ANSDGGILTLVQTVEDGSLVS 261
             L+ +L D  +H +  ++  ++L +++N+ + ++AI  AN+   ++ ++QT +     +
Sbjct: 504 TALVKMLSDSTRH-RMVDEALTILSVLANNQDAKSAIVKANTLPALIGILQTDQTR---N 563

Query: 262 TEHAVGVLLSMCQSCRETYR-EPILKEGAIPGLLRLTVEGTAEAQERARRLLDLLRDSPQ 319
            E+A  +LLS+C+  R+T +   I + GA+  L+ L+  GT   + +A  LL+LLR + Q
Sbjct: 564 RENAAAILLSLCK--RDTEKLITIGRLGAVVPLMDLSKNGTERGKRKAISLLELLRKACQ 612

[Close]

BLAST of Sed0002464 vs. ExPASy TrEMBL
Match: A0A6J1CH34 (U-box domain-containing protein 45 OS=Momordica charantia OX=3673 GN=LOC111011364 PE=4 SV=1)

HSP 1 Score: 592.4 bits (1526), Expect = 1.3e-165
Identity = 328/362 (90.61%), Postives = 343/362 (94.75%), Query Frame = 0


Query: 1   MKQEDEEEGGGRFELGRNSESTLNQRKQILIFQISQKLIHGDLHSRIEAARDLRNLARKS 60
           MKQ++ EE        R+S+S LN R QILIFQ+SQKLIHGDLHSRI+AA+DLRNLARKS
Sbjct: 1   MKQDEREEPEEEIGFQRDSDS-LNHRNQILIFQLSQKLIHGDLHSRIQAAKDLRNLARKS 60

Query: 61  SPKSRSNLGASTLIQPLVCMLLSPNLDAREASLLALLNLASRNERNKIKIVAAGAIPPLL 120
           SPKSRSNLGAS+LIQPLVCMLLSP+LDAREASLLALLNLASRNERNKIKIVAAGA+PPLL
Sbjct: 61  SPKSRSNLGASSLIQPLVCMLLSPSLDAREASLLALLNLASRNERNKIKIVAAGAVPPLL 120

Query: 121 ELLKLQNLSLRELATAAILTLSAAASNKPVILSAGATSLLVQILISGSVQAKVDAVTALY 180
           ELLK QNLSLRELATAAILTLSAAASNKPVILSAGA SLLVQILISGSVQAKVDAVTALY
Sbjct: 121 ELLKFQNLSLRELATAAILTLSAAASNKPVILSAGAASLLVQILISGSVQAKVDAVTALY 180

Query: 181 YLSACTESENGSMMMLDPRAVVPLIDLLKDCKKHSKFAEKTTSLLQIISNSDEGRTAIAN 240
           YLSAC ES+N   MMLDPRAV PLIDLLK+CKKHSKFAEKTTSLLQIISNSDEGRTAI+N
Sbjct: 181 YLSACNESDN-CPMMLDPRAVAPLIDLLKECKKHSKFAEKTTSLLQIISNSDEGRTAISN 240

Query: 241 SDGGILTLVQTVEDGSLVSTEHAVGVLLSMCQSCRETYREPILKEGAIPGLLRLTVEGTA 300
           SDGGILTLVQTVEDGSLVSTEHAVGVLLS+CQSCRETYREPILKEGAIPGLLRLTVEGTA
Sbjct: 241 SDGGILTLVQTVEDGSLVSTEHAVGVLLSLCQSCRETYREPILKEGAIPGLLRLTVEGTA 300

Query: 301 EAQERARRLLDLLRDSPQEKRMSSTDLERIVYKIAAEVDGVGQAAETAKRLMQEMVQRRL 360
           EAQERARRLLDLLRDSPQEKRMSSTDLER+VYKIAAEVDGVGQAAETAKRLMQEMVQRRL
Sbjct: 301 EAQERARRLLDLLRDSPQEKRMSSTDLERMVYKIAAEVDGVGQAAETAKRLMQEMVQRRL 360

Query: 361 NT 363
           NT
Sbjct: 361 NT 360

[Close]

BLAST of Sed0002464 vs. ExPASy TrEMBL
Match: A0A6J1FYC6 (U-box domain-containing protein 45 OS=Cucurbita moschata OX=3662 GN=LOC111448481 PE=4 SV=1)

HSP 1 Score: 587.4 bits (1513), Expect = 4.0e-164
Identity = 329/363 (90.63%), Postives = 341/363 (93.94%), Query Frame = 0


Query: 1   MKQEDEEEGGGRFELGRNSESTLNQRKQILIFQISQKLIHGDLHSRIEAARDLRNLARKS 60
           MKQE  EE        R+SE T N +KQILIFQ+SQ+LIHGDL SRIEAA+DLR LARKS
Sbjct: 1   MKQEGREEQEDEIVFDRDSE-TSNHKKQILIFQLSQRLIHGDLLSRIEAAKDLRKLARKS 60

Query: 61  SPKSRSNLGASTLIQPLVCMLLSPNLDAREASLLALLNLASRNERNKIKIVAAGAIPPLL 120
           SPKSRSNLGAS+LIQPLVCMLLSPNLDAREASLLALLNLASRNERNKIKIVAAGAIPPLL
Sbjct: 61  SPKSRSNLGASSLIQPLVCMLLSPNLDAREASLLALLNLASRNERNKIKIVAAGAIPPLL 120

Query: 121 ELLKLQNLSLRELATAAILTLSAAASNKPVILSAGATSLLVQILISGSVQAKVDAVTALY 180
           ELLK QNLSLRELATAAILTLSAAASNKPVILSAGATSLLVQILISGSVQAKVDAVTALY
Sbjct: 121 ELLKFQNLSLRELATAAILTLSAAASNKPVILSAGATSLLVQILISGSVQAKVDAVTALY 180

Query: 181 YLSACTESENGSMMMLDPRAVVPLIDLLKDCKKHSKFAEKTTSLLQIISNSDEGRTAIAN 240
           YLSACTE+EN   MMLDP AV PLIDLLK+CKKHSKFAEKTTSLLQIISNSDEGRTAI+N
Sbjct: 181 YLSACTENEN-CPMMLDPGAVAPLIDLLKECKKHSKFAEKTTSLLQIISNSDEGRTAISN 240

Query: 241 SDGGILTLVQTVEDGSLVSTEHAVGVLLSMCQSCRETYREPILKEGAIPGLLRLTVEGTA 300
           SDGGILTLVQTVEDGSLVSTE+AVGVLLSMCQSCRETYREPILKEGAIPGLLRLTVEGTA
Sbjct: 241 SDGGILTLVQTVEDGSLVSTENAVGVLLSMCQSCRETYREPILKEGAIPGLLRLTVEGTA 300

Query: 301 EAQERARRLLDLLRDSPQEKRMSSTDLERIVYKIAAEVDGVGQAAETAKRLMQEMVQRRL 360
           EAQ+RARRLLDLLRDSPQEKRMSSTDLERI YKIAAEVDGVGQAAETAKRLMQEMVQRRL
Sbjct: 301 EAQDRARRLLDLLRDSPQEKRMSSTDLERIAYKIAAEVDGVGQAAETAKRLMQEMVQRRL 360

Query: 361 NTS 364
           NT+
Sbjct: 361 NTA 361

[Close]

BLAST of Sed0002464 vs. ExPASy TrEMBL
Match: A0A0A0KFU6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G113530 PE=4 SV=1)

HSP 1 Score: 586.6 bits (1511), Expect = 6.9e-164
Identity = 326/366 (89.07%), Postives = 340/366 (92.90%), Query Frame = 0


Query: 1   MKQEDEEEGGGR----FELGRNSESTLNQRKQILIFQISQKLIHGDLHSRIEAARDLRNL 60
           MKQE+ EE        F+   +  S  N RKQ LIFQ+SQ+LIHGDLHSRIEAA+DLRNL
Sbjct: 1   MKQEEREEKEVEDEIVFDTSDSQISNSNHRKQFLIFQLSQRLIHGDLHSRIEAAKDLRNL 60

Query: 61  ARKSSPKSRSNLGASTLIQPLVCMLLSPNLDAREASLLALLNLASRNERNKIKIVAAGAI 120
           ARKSSPKSRSNLGAS+LIQPLVCMLLSPNLDAREASLLALLNLASRNERNKIKIVAAGAI
Sbjct: 61  ARKSSPKSRSNLGASSLIQPLVCMLLSPNLDAREASLLALLNLASRNERNKIKIVAAGAI 120

Query: 121 PPLLELLKLQNLSLRELATAAILTLSAAASNKPVILSAGATSLLVQILISGSVQAKVDAV 180
           PPLLELLKLQNLSLRELATAAILTLSAA SNKPVILSAGATSLLVQILISGSVQAKVDAV
Sbjct: 121 PPLLELLKLQNLSLRELATAAILTLSAATSNKPVILSAGATSLLVQILISGSVQAKVDAV 180

Query: 181 TALYYLSACTESENGSMMMLDPRAVVPLIDLLKDCKKHSKFAEKTTSLLQIISNSDEGRT 240
           TALYYLSACTESE+ S MMLDP AV PLIDLLK+CKKHSKFAEKTTSLLQIISNS+EGRT
Sbjct: 181 TALYYLSACTESESSS-MMLDPGAVAPLIDLLKECKKHSKFAEKTTSLLQIISNSEEGRT 240

Query: 241 AIANSDGGILTLVQTVEDGSLVSTEHAVGVLLSMCQSCRETYREPILKEGAIPGLLRLTV 300
           AI+NSDGGILTLVQT+EDGSLVSTEHAVGVLLSMCQ+CRETYREPILKEGAIPGLLRLTV
Sbjct: 241 AISNSDGGILTLVQTIEDGSLVSTEHAVGVLLSMCQTCRETYREPILKEGAIPGLLRLTV 300

Query: 301 EGTAEAQERARRLLDLLRDSPQEKRMSSTDLERIVYKIAAEVDGVGQAAETAKRLMQEMV 360
           EGT EAQERARRLLDLLRDSPQEKRMSS DLERIVYKIAAEVDG+ QAAETAKRLMQEMV
Sbjct: 301 EGTTEAQERARRLLDLLRDSPQEKRMSSADLERIVYKIAAEVDGIDQAAETAKRLMQEMV 360

Query: 361 QRRLNT 363
           QRRLNT
Sbjct: 361 QRRLNT 365

[Close]

BLAST of Sed0002464 vs. ExPASy TrEMBL
Match: A0A6J1JE30 (U-box domain-containing protein 45 OS=Cucurbita maxima OX=3661 GN=LOC111483691 PE=4 SV=1)

HSP 1 Score: 583.9 bits (1504), Expect = 4.5e-163
Identity = 326/363 (89.81%), Postives = 342/363 (94.21%), Query Frame = 0


Query: 1   MKQEDEEEGGGRFELGRNSESTLNQRKQILIFQISQKLIHGDLHSRIEAARDLRNLARKS 60
           MKQE  EE        R+SE T N +KQILIFQ+SQ+LIHGDL SRIEAA+DLR LARKS
Sbjct: 1   MKQEGREEQEDEIVFERDSE-TSNHKKQILIFQLSQRLIHGDLLSRIEAAKDLRKLARKS 60

Query: 61  SPKSRSNLGASTLIQPLVCMLLSPNLDAREASLLALLNLASRNERNKIKIVAAGAIPPLL 120
           SPKSRSNLGAS+LIQPLVCMLLSPNLDAREASLLALLNLASRNERNKIKIVAAGAIPPLL
Sbjct: 61  SPKSRSNLGASSLIQPLVCMLLSPNLDAREASLLALLNLASRNERNKIKIVAAGAIPPLL 120

Query: 121 ELLKLQNLSLRELATAAILTLSAAASNKPVILSAGATSLLVQILISGSVQAKVDAVTALY 180
           ELLK QNLSLRELATAAILTLSAAASNKPVILSAGATSLLVQILISGSVQAKVDAVTAL+
Sbjct: 121 ELLKFQNLSLRELATAAILTLSAAASNKPVILSAGATSLLVQILISGSVQAKVDAVTALF 180

Query: 181 YLSACTESENGSMMMLDPRAVVPLIDLLKDCKKHSKFAEKTTSLLQIISNSDEGRTAIAN 240
           YLSACTE+EN  +MMLDP AV PLI+LLK+CKKHSKFAEKTTSLLQIISNSDEGRTAI+N
Sbjct: 181 YLSACTENEN-CLMMLDPGAVAPLIELLKECKKHSKFAEKTTSLLQIISNSDEGRTAISN 240

Query: 241 SDGGILTLVQTVEDGSLVSTEHAVGVLLSMCQSCRETYREPILKEGAIPGLLRLTVEGTA 300
           SDGGILTLVQTVEDGSLVSTE+AVGVLLSMCQSCRETYREPILKEGAIPGLLRLTVEGTA
Sbjct: 241 SDGGILTLVQTVEDGSLVSTENAVGVLLSMCQSCRETYREPILKEGAIPGLLRLTVEGTA 300

Query: 301 EAQERARRLLDLLRDSPQEKRMSSTDLERIVYKIAAEVDGVGQAAETAKRLMQEMVQRRL 360
           EAQ+RARRLLDLLRDSP+EKRMSSTDLERI YKIAAEVDGVGQAAETAKRLMQEMVQRRL
Sbjct: 301 EAQDRARRLLDLLRDSPREKRMSSTDLERIAYKIAAEVDGVGQAAETAKRLMQEMVQRRL 360

Query: 361 NTS 364
           NT+
Sbjct: 361 NTA 361

[Close]

BLAST of Sed0002464 vs. ExPASy TrEMBL
Match: A0A1S3BIZ5 (U-box domain-containing protein 45 OS=Cucumis melo OX=3656 GN=LOC103490421 PE=4 SV=1)

HSP 1 Score: 579.7 bits (1493), Expect = 8.4e-162
Identity = 324/366 (88.52%), Postives = 336/366 (91.80%), Query Frame = 0


Query: 1   MKQEDEEEGGGR----FELGRNSESTLNQRKQILIFQISQKLIHGDLHSRIEAARDLRNL 60
           MKQE+ EE        F+   +  S  N RKQ LIFQISQ+LIHGDLHSRIEAA+DLRNL
Sbjct: 1   MKQEEREEREVEDEIVFDTPDSQISNSNHRKQFLIFQISQRLIHGDLHSRIEAAKDLRNL 60

Query: 61  ARKSSPKSRSNLGASTLIQPLVCMLLSPNLDAREASLLALLNLASRNERNKIKIVAAGAI 120
           ARKSSPKSRSNLGAS+LIQPLVCMLLSPNLDAREASLLALLNLASRNERNKIKIVAAGAI
Sbjct: 61  ARKSSPKSRSNLGASSLIQPLVCMLLSPNLDAREASLLALLNLASRNERNKIKIVAAGAI 120

Query: 121 PPLLELLKLQNLSLRELATAAILTLSAAASNKPVILSAGATSLLVQILISGSVQAKVDAV 180
           PPLLELLK QNLSLRELATAAILTLSAA SNKPVILSAGATSLLVQILISGSVQAKVDAV
Sbjct: 121 PPLLELLKFQNLSLRELATAAILTLSAATSNKPVILSAGATSLLVQILISGSVQAKVDAV 180

Query: 181 TALYYLSACTESENGSMMMLDPRAVVPLIDLLKDCKKHSKFAEKTTSLLQIISNSDEGRT 240
           TALYYLSACT SEN S MMLDP AV PLIDLLK+CKKHSKFAEKTTSLLQIISNS+EGRT
Sbjct: 181 TALYYLSACTGSENSS-MMLDPGAVAPLIDLLKECKKHSKFAEKTTSLLQIISNSEEGRT 240

Query: 241 AIANSDGGILTLVQTVEDGSLVSTEHAVGVLLSMCQSCRETYREPILKEGAIPGLLRLTV 300
           AI+N DGGILTLVQTVEDGSLVSTEHAVG+LLSMCQ+CRETYREPILKEGAIPGLLRLTV
Sbjct: 241 AISNLDGGILTLVQTVEDGSLVSTEHAVGILLSMCQTCRETYREPILKEGAIPGLLRLTV 300

Query: 301 EGTAEAQERARRLLDLLRDSPQEKRMSSTDLERIVYKIAAEVDGVGQAAETAKRLMQEMV 360
           EGT EAQERARRLLDLLRDSPQEK MSS DLERIVYKIAAEVDG+ QAAETAKRLMQEMV
Sbjct: 301 EGTTEAQERARRLLDLLRDSPQEKTMSSADLERIVYKIAAEVDGIDQAAETAKRLMQEMV 360

Query: 361 QRRLNT 363
           QRRLNT
Sbjct: 361 QRRLNT 365

[Close]

BLAST of Sed0002464 vs. TAIR 10
Match: AT4G12710.1 (ARM repeat superfamily protein )

HSP 1 Score: 374.4 bits (960), Expect = 1.0e-103
Identity = 218/366 (59.56%), Postives = 281/366 (76.78%), Query Frame = 0


Query: 1   MKQEDEEEGGGRFELGRNSESTLNQRKQILIFQISQKLIHGDLHSRIEAARDLRNLARKS 60
           + +EDE E          + +T    K++LI  +S+KL+HGDL  RIEAA+++R L RKS
Sbjct: 24  ISEEDEAE-------EETTTNTWKTTKELLILHLSKKLLHGDLDFRIEAAKEIRKLLRKS 83

Query: 61  SPKS--RSNLGASTLIQPLVCMLLSPNLDAREASLLALLNLASRNERNKIKIVAAGAIPP 120
             KS  RS L  + +I PLV ML S N+DAR ASLLALLNLA RNERNKI+IV AGA+PP
Sbjct: 84  PVKSSARSKLADAGVIPPLVPMLFSSNVDARHASLLALLNLAVRNERNKIEIVKAGAVPP 143

Query: 121 LLELLKLQNLSLRELATAAILTLSAAASNKPVILSAGATSLLVQILISGSVQAKVDAVTA 180
           L+++LKL N SLRELATAAILTLSAA +NK +I+S+G   LL+Q+L SG+VQ KVDAVTA
Sbjct: 144 LIQILKLHNASLRELATAAILTLSAAPANKAMIISSGVPPLLIQMLSSGTVQGKVDAVTA 203

Query: 181 LYYLSACTESENGSMMMLDPRAVVPLIDLLKDCKKHSKFAEKTTSLLQ-IISNSDEGRTA 240
           L+ LSAC E    S  +LD +AV PLI LLK+CKKHSKFAEK T+L++ I+S+S++GR A
Sbjct: 204 LHNLSACKEY---SAPILDAKAVYPLIHLLKECKKHSKFAEKATALVEMILSHSEDGRNA 263

Query: 241 IANSDGGILTLVQTVEDGSLVSTEHAVGVLLSMCQSCRETYREPILKEGAIPGLLRLTVE 300
           I + + GILTLV+TVEDGS +S EHAVG LLS+C+S R+ YR+ ILKEGAIPGLL  TV+
Sbjct: 264 ITSCEDGILTLVETVEDGSPLSIEHAVGALLSLCRSDRDKYRKLILKEGAIPGLLSSTVD 323

Query: 301 GTAEAQERARRLLDLLRDSPQEKRMSSTDLERIVYKIAAEVDGVGQAAETAKRLMQEMVQ 360
           GT+++++RAR LLDLLR++P+EK M+   LE+IVY IA +VDG  +AAETAK+L+Q+MV 
Sbjct: 324 GTSKSRDRARVLLDLLRETPREKEMTPLTLEKIVYGIAVQVDGAEKAAETAKKLLQDMVH 379

Query: 361 RRLNTS 364
           R +  S
Sbjct: 384 RSMELS 379

[Close]

BLAST of Sed0002464 vs. TAIR 10
Match: AT3G03440.1 (ARM repeat superfamily protein )

HSP 1 Score: 227.6 bits (579), Expect = 1.6e-59
Identity = 142/325 (43.69%), Postives = 224/325 (68.92%), Query Frame = 0


Query: 42  DLHSRIEAARDLRNLARKSSPKSRSNLGASTLIQPLVCMLLSPNLDA-REASLLALLNLA 101
           D  SR+ AA+++R L  K+S + R +   S  ++PLV ML   + ++  EA+LLALLNLA
Sbjct: 77  DCDSRLFAAKEIRRLT-KTSHRCRRHF--SQAVEPLVSMLRFDSPESHHEAALLALLNLA 136

Query: 102 SRNERNKIKIVAAGAIPPLLELLKLQNLSLRELATAAILTLSAAASNKPVILSAGATSLL 161
            ++E+NK+ I+ AGA+ P++  L+  + +L+E A+A++LTLSA+A+NKP+I + G   LL
Sbjct: 137 VKDEKNKVSIIEAGALEPIINFLQSNSPTLQEYASASLLTLSASANNKPIIGANGVVPLL 196

Query: 162 VQILISGSVQAKVDAVTALYYLSACTESENGSMMMLDPRAVVPLIDLLKDCKKHSKFAEK 221
           V+++  GS QAK DAV AL  LS   ++ +   M+L  + + P+++LLK  KK SK +EK
Sbjct: 197 VKVIKHGSPQAKADAVMALSNLSTLPDNLS---MILATKPLSPILNLLKSSKKSSKTSEK 256

Query: 222 TTSLLQ-IISNSDEGRTAIANSDGGILTLVQTVEDGSLVSTEHAVGVLLSMCQSCRETYR 281
             SL++ ++ + +E RT + + +GG+L +V+ +E+GSL + EHAVGVLL++CQS R  YR
Sbjct: 257 CCSLIEALMVSGEEARTGLVSDEGGVLAVVEVLENGSLQAREHAVGVLLTLCQSDRSKYR 316

Query: 282 EPILKEGAIPGLLRLTVEGTAEAQERARRLLDLLRDSPQEKRMSSTD-LERIVYKIAAEV 341
           EPIL+EG IPGLL LTV+GT++++ +A+RLL LLR+S   +     D +E IV  + + +
Sbjct: 317 EPILREGVIPGLLELTVQGTSKSRIKAQRLLCLLRNSESPRSEVQPDTIENIVSSLISHI 376

Query: 342 DGVGQAAETAKRLMQEMVQRRLNTS 364
           DG  Q+ + AK+++ EMVQ  +  S
Sbjct: 377 DGDDQSGK-AKKMLAEMVQVSMEKS 394

[Close]

BLAST of Sed0002464 vs. TAIR 10
Match: AT5G14510.1 (ARM repeat superfamily protein )

HSP 1 Score: 168.3 bits (425), Expect = 1.1e-41
Identity = 126/330 (38.18%), Postives = 193/330 (58.48%), Query Frame = 0


Query: 34  ISQKLIHGDLHSRIEAARDLRNLARKSSPKSRSNLGASTLIQPLVCMLLSPNLDAREASL 93
           + + L+ G+  S+IEAA +L NL+R    K R  L    +I PL+ ML S +    E +L
Sbjct: 5   VVESLLSGNRESQIEAAIELTNLSR----KQRQKLAEREIISPLLSMLQSQDCITTEVAL 64

Query: 94  LALLNLASRNERNKIKIVAAGAIPPLLELLKLQ-NLSLRELATAAILTLSAAASNKPVIL 153
            ALL+LA  +ERNK++IV +GA+P LLE+L+ +  + + ELA A +L LS+   NK  + 
Sbjct: 65  SALLSLAFGSERNKVRIVKSGAVPTLLEILQSETKMVVLELAMAFLLILSSCNKNKVKMA 124

Query: 154 SAGATSLLVQI--LISGSVQAKVDAVTALYYLSACTESENGSMMMLDPRAVVPLIDLLKD 213
           S     LLV +  L   ++QAKVD +  L  LS   +      +++   A   L+ ++  
Sbjct: 125 STRLVQLLVGLIGLDRLTIQAKVDGIATLQNLSTLHQI---VPLVIASGAPYALLQVINF 184

Query: 214 CKKHSKFAEKTTSLLQ-IISNSDEGRTAIANSDGGILTLVQTVEDGSLVSTEHAVGVLLS 273
           C K S+ A+K  +LL+ IIS+S E   ++++  G I  LV+ +E+GS    EHAVG+LL 
Sbjct: 185 CDKSSELADKAVALLENIISHSPE---SVSSIGGAIGVLVEAIEEGSAQCKEHAVGILLG 244

Query: 274 MCQSCRETYREPILKEGAIPGLLRLTVEGTAEAQERARRLLDLLRDSPQEKRMSSTDLER 333
           +C + RET R  IL+EG +PGLL+++V+GT  A+E AR LL LLRD       +      
Sbjct: 245 ICNNDRETNRGMILREGVMPGLLQVSVDGTRRAKEMARELLLLLRDCSGYVIKNKQSKIE 304

Query: 334 IVYKIAAEVDGVGQAAE-TAKRLMQEMVQR 359
           IV +I  E+D  G+    T  +L++EM+ +
Sbjct: 305 IVEQIMREIDQEGERIPGTMLKLVEEMISK 324

[Close]

BLAST of Sed0002464 vs. TAIR 10
Match: AT3G01400.1 (ARM repeat superfamily protein )

HSP 1 Score: 132.1 bits (331), Expect = 9.0e-31
Identity = 95/267 (35.58%), Postives = 156/267 (58.43%), Query Frame = 0


Query: 48  EAARDLRNLARKSSPKSRSNLGASTLIQPLVCMLLSPNLDAREASLLALLNLASRNERNK 107
           +AA ++R L  K+ P++R  +  +  I+PL+ ++ S +L  +E  + A+LNL+  +E NK
Sbjct: 82  QAAMEIR-LLSKNKPENRIKIAKAGAIKPLISLISSSDLQLQEYGVTAILNLSLCDE-NK 141

Query: 108 IKIVAAGAIPPLLELLKLQNLSLRELATAAILTLSAAASNKPVILSAGATSLLVQILISG 167
             I ++GAI PL+  LK+   + +E A  A+L LS    NK  I  +GA  LLV +L +G
Sbjct: 142 ESIASSGAIKPLVRALKMGTPTAKENAACALLRLSQIEENKVAIGRSGAIPLLVNLLETG 201

Query: 168 SVQAKVDAVTALYYLSACTESENGSMMMLDPRAVVPLIDLLKDCKKHSKFAEKTTSLLQI 227
             +AK DA TALY  S C+  EN  +  +    + PL++L+ D    S   +K+  ++ +
Sbjct: 202 GFRAKKDASTALY--SLCSAKEN-KIRAVQSGIMKPLVELMADF--GSNMVDKSAFVMSL 261

Query: 228 ISNSDEGRTAIANSDGGILTLVQTVEDGSLVSTEHAVGVLLSMCQSCRETYREPILKEGA 287
           + +  E + AI   +GG+  LV+ VE G+    E AV +LL +C+     YR  + +EGA
Sbjct: 262 LMSVPESKPAIV-EEGGVPVLVEIVEVGTQRQKEMAVSILLQLCEE-SVVYRTMVAREGA 321

Query: 288 IPGLLRLTVEGTAEAQERARRLLDLLR 315
           IP L+ L+  GT+ A+++A  L++LLR
Sbjct: 322 IPPLVALSQAGTSRAKQKAEALIELLR 339

[Close]

BLAST of Sed0002464 vs. TAIR 10
Match: AT5G58680.1 (ARM repeat superfamily protein )

HSP 1 Score: 125.9 bits (315), Expect = 6.4e-29
Identity = 99/288 (34.38%), Postives = 167/288 (57.99%), Query Frame = 0


Query: 48  EAARDLRNLARKSSPKSRSNLGASTLIQPLVCMLLSPNLDAREASLLALLNLASRNERNK 107
           +AA ++R L  K+ P++R  L  +  I+PLV ++ S +L  +E  + A+LNL+  +E NK
Sbjct: 80  QAAMEIR-LLSKNKPENRIKLAKAGAIKPLVSLISSSDLQLQEYGVTAVLNLSLCDE-NK 139

Query: 108 IKIVAAGAIPPLLELLKLQNLSLRELATAAILTLSAAASNKPVILSAGATSLLVQILISG 167
             IV++GA+ PL+  L+L   + +E A  A+L LS    NK  I  +GA  LLV +L +G
Sbjct: 140 EMIVSSGAVKPLVNALRLGTPTTKENAACALLRLSQVEENKITIGRSGAIPLLVNLLENG 199

Query: 168 SVQAKVDAVTALYYLSACTESENGSMMMLDPRAVVPLIDLLKDCKKHSKFAEKTTSLLQI 227
             +AK DA TALY  S C+ +EN     ++   + PL++L+ D +  S   +K+  ++ +
Sbjct: 200 GFRAKKDASTALY--SLCSTNEN-KTRAVESGIMKPLVELMIDFE--SDMVDKSAFVMNL 259

Query: 228 ISNSDEGRTAIANSDGGILTLVQTVEDGSLVSTEHAVGVLLSMCQSCRETYREPILKEGA 287
           + ++ E + A+   +GG+  LV+ VE G+    E +V +LL +C+     YR  + +EGA
Sbjct: 260 LMSAPESKPAVV-EEGGVPVLVEIVEAGTQRQKEISVSILLQLCEE-SVVYRTMVAREGA 319

Query: 288 IPGLLRLTVEGTAE--AQERARRLLDLLR----DSPQEKRMSSTDLER 330
           +P L+ L+ +G+A   A+ +A  L++LLR       Q++   S D ER
Sbjct: 320 VPPLVALS-QGSASRGAKVKAEALIELLRQPRQQQQQQQHFESNDNER 357

The following BLAST results are available for this feature:

BLAST of Sed0002464 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140786.1	2.6e-165	90.61	U-box domain-containing protein 45 [Momordica charantia]	[more]
XP_022943890.1	8.4e-164	90.63	U-box domain-containing protein 45 [Cucurbita moschata] >XP_022943892.1 U-box do...	[more]
XP_038901493.1	8.4e-164	90.38	U-box domain-containing protein 45 [Benincasa hispida]	[more]
XP_004139995.1	1.4e-163	89.07	U-box domain-containing protein 45 [Cucumis sativus]	[more]
XP_023511820.1	5.4e-163	90.36	U-box domain-containing protein 45 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0002464 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZ40	1.1e-22	34.54	U-box domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=PUB14 PE=1...	[more]
Q8GWV5	1.5e-22	34.15	U-box domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PUB3 PE=2 S...	[more]
Q5XEZ8	1.2e-19	34.29	U-box domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PUB2 PE=2 S...	[more]
Q681N2	2.0e-19	31.33	U-box domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=PUB15 PE=2...	[more]
Q8GUG9	3.4e-19	29.67	U-box domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=PUB11 PE=2...	[more]

BLAST of Sed0002464 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CH34	1.3e-165	90.61	U-box domain-containing protein 45 OS=Momordica charantia OX=3673 GN=LOC11101136...	[more]
A0A6J1FYC6	4.0e-164	90.63	U-box domain-containing protein 45 OS=Cucurbita moschata OX=3662 GN=LOC111448481...	[more]
A0A0A0KFU6	6.9e-164	89.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G113530 PE=4 SV=1	[more]
A0A6J1JE30	4.5e-163	89.81	U-box domain-containing protein 45 OS=Cucurbita maxima OX=3661 GN=LOC111483691 P...	[more]
A0A1S3BIZ5	8.4e-162	88.52	U-box domain-containing protein 45 OS=Cucumis melo OX=3656 GN=LOC103490421 PE=4 ...	[more]

BLAST of Sed0002464 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G12710.1	1.0e-103	59.56	ARM repeat superfamily protein	[more]
AT3G03440.1	1.6e-59	43.69	ARM repeat superfamily protein	[more]
AT5G14510.1	1.1e-41	38.18	ARM repeat superfamily protein	[more]
AT3G01400.1	9.0e-31	35.58	ARM repeat superfamily protein	[more]
AT5G58680.1	6.4e-29	34.38	ARM repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000225	Armadillo	SMART	SM00185	arm_5	coord: 144..184 e-value: 1.6 score: 17.7 coord: 102..143 e-value: 7.9E-4 score: 28.7 coord: 188..230 e-value: 160.0 score: 3.9 coord: 231..272 e-value: 110.0 score: 5.3 coord: 61..101 e-value: 77.0 score: 6.4
IPR000225	Armadillo	PFAM	PF00514	Arm	coord: 103..142 e-value: 3.8E-4 score: 20.4
IPR000225	Armadillo	PROSITE	PS50176	ARM_REPEAT	coord: 114..156 score: 10.0974
IPR000225	Armadillo	PROSITE	PS50176	ARM_REPEAT	coord: 199..243 score: 9.6774
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 175..327 e-value: 6.3E-16 score: 60.3
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 22..171 e-value: 7.1E-23 score: 83.3
None	No IPR available	PANTHER	PTHR23315	U BOX DOMAIN-CONTAINING	coord: 21..342
None	No IPR available	PANTHER	PTHR23315:SF65	ARM REPEAT SUPERFAMILY PROTEIN	coord: 21..342
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 36..313

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002464.1	Sed0002464.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding