Sed0002458 (gene) Chayote v1

Overview


Name	Sed0002458
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Auxin-responsive protein
Location	LG12: 29674329 .. 29678563 (-)
RNA-Seq Expression	Sed0002458
Synteny	Sed0002458

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGCTTTTCAGTTTCAAACCCTAACCCTAATCCTGACCCTAACCCACCTCTGATTCTTCTGATTTCAATATGTTTTTGTCTCAAAATGAAATTTCAGATTCAGAAGAAGCTTTGCAGATTAGGGTTTGTATTTTATATATCTACGGTGTGTATGTTCATGTCAGCTTTCTCAAAATTCCCTCACTTTCCACGACATTGCGAAAAAAACCCCAACAAATCGGCCCAAATCATAAACCCTAGCGAAAAATTGGCTCATGGGGTTTTTAAATTCCTGCACATTGGGCTTCAAAATCCGAGAAAATCTGCCCCGTCCTATCCTTTTCCGCATTTCCCAGTGTTACGCTGCTTTCAATTTTTCTCTGTTTCGTGCTGTCGCTTGGCGCAGGTTAGCGATGAAGAAAAAAGCAAAACAAACATAGCACAGAGAAATAATATATTTTTTTTCTTTTTTGATTAAAGAAAAAAAAGGGCAATTGGGGAAAAGCTGGATGGAGACTTTCTGTGCTTTGTCGGGGTGGTTACCCACAAAAAGGTACATTGAATTATTGAAATCAAAACAAATCCTGAAAAGAATCATACTGTTCCATGTTTTCTCTTTTCTCTTTACCATTGTGCCTCTGCTTGTTTGTTTGTTTGTTTATTTATTTAGTCTTGTTGCTCTTGTTTTTCCTTTCATTTATCTCCCTCAGGGTCAGATTCACAGTTGTTGAGAAGTTCAGAGAGATCCCAACTGGGTTTTAACAATCTTGAAGAAGTGTTTTGATCTTCTTATCTTGTTCTTGTTCTTGTTGTTGTGATTTTTCCCCATGCTTTTTTGTGTGTTGCTCTTGAGTTTCTGATTTTTCTGATGTCTATACCGTTAGAACATGATTACATAGGGTTAACAGAGTCTGTTCCTTCTCTGGAAGGCTCTGAAAAGTCTTCTGATAGACGAAGTAATGGTGGGTTGAACCTTAAGGCTACTGAGCTGAGGTTGGGGTTGCCTGGGTCGGAGTCACCGGTGAGGGATGATGGCCTTGAGGACAATAATGGGTACCCTCTTAAGAGCTCTGTTTCTGGGGCTAAGAGGGGTTTCTCTGTAGCCATTGATAGAGCTTCTGCCAAGTGGGTTGCTGGATCTGAAGCTGATTCCACTAAAAATGGAGGCCTGTTTTCTCCCAGAGGAGTTATTGAGAATAAGGCTCAACCATCTGCTTCAGCTGTTTCTGGTGCTAAAGATGGTATTTCTCCAAAGCCATTGCATGAGGAGAAGCCTCAGCTTTCTCCCCCTGCAGCCAAGTATGTCTTCTTCCATTTCCTTTTCCCTCTTCCATTTTCAATTCTGACTGAACTCTTGCTTGTTTTTGAATTCAACAACTATTGGGGGTGGGGGATTTTAACCCTTGACCTCCTCTTGGTTTGCTTGTTCTAAATCAGTTTCTTTCCCATCGTTCTAGCTTCTTCTCTGATTTGAATGAAAATTGTGGGTTGTGACTTGTGAATCCAATCATGTAGTTGTACTGTAGTCCTCATTTTTTGATGACTGGTGGAAGTTTTTGGAGAAAAGTAAACTTGACCCGTTTTATTGACACAGATGTTTTCTGCCTCTATGAAAAACTAGTCCAAGATTTTGGGTTTTCCTTTTCCCTTTATATTACAAACTATGTTGTCTTTGCATATAATTTTGAGCTTATAAGCTTCTTCAGGACGCCTCTTCTCTCTAACCCTTCATTCATCAAATTTATAACTGTTTCTTTTGAATTTTTTCATATAAATGTCTTTTTAAATTTCCCCACCTTTTTAACAATTGCTTGTGTTGGATTTCTTGATTCTAATGCAGCCACTAATTCTTTAAAGTCTGTCTGTTACAGGGCACAAGTTGTAGGATGGCCACCCATTCGATCTTTCCGTAAGAATTCAATGACAATACAACCCCCTAAAGATACTGATGATGGAGATGGTAAGATGGGATCGGGTTGCCTTTATGTCAAGGTAAGTATGGATGGCGCACCGTACCTTAGGAAGGTTGATCTGAAAACCTATGGAAGCTATGCAGACCTATCGTCGGCCCTGGACAAAATGTTCATCAGCTTCACAATTGGTATGCTCTTTATAGCTTATCCATGTCCTAAGGATCTTTGCTGATTTAGTATTGTTAATAACTCCCTCCCCTCAAGGTCCTAGAACCCAGCAATGACATTACTCCTTTGATGTCTCCCGGTACTTGGCCTAGGGACGGGCGTGGTTACCCTTGTTTCAAAAAGAGTATTGTTAATAACTCCCTCCCTTGACGCGGATGATTATATTGCATCACTTCCATGGTTCGATCACAAGCACTTCCAGGAATGGGGATGTTTTAGATTTGACTTTTGATGAATTCATGTAGAGAATTCTTGGGGAAAGCTTGATTTGGAGAATCACGTGTCTCAGTCTCTAGAGTCTAGCTGTACCAAGACTTCTTGAAAGGAAGGAATTCATGTGTAGAATATATTTGAAGGCATTAATAATAAGACATAGGATCAACAATGAAATCAAGTTTGTGTTTTGGGATCATGGTGTTCTTGGCTTCTTGGGCATGTCTTGGATGTTTTATGTTGCTCGGTTACCCTCAGTTGAATTAGTTTTTTTCTTTTTCAATTAGAATTGACTTTTTCTTTGCTATGGCTTCCTTCATTATGTCAGGTCATTGTGGCTCCAATGGAGTTCCACACCGGGAAGCATTCAACGAGAGTCGATTGATGGATCTGCTCCATGGCTCTGAATATGTACTCACCTATGAAGACAAGGATGGTGATTGGATGCTCGTTGGAGATGTTCCATGGGAGTAAGTTCATTATCACTCTTTTGTTTTTTTGAGAATGAAGTTCATTATCCCTCTTTGTGTTACATTAAAGTAGCTCTAATCTCAATTTTTTATTCCATGAATGTCCGGACCAGCTTATACCCACTTCAACTATTTCACGAGACATATCGCGTAATTTTATAAGGAAACACTAGAAATTATTTCCTAAATAGGTGATTACCATGAATTAAACAACCTATCACCTCTAGACTCCAAGGCCCTCTTCAACCGATGCTAAACCATGACAGTTACTTCTGTTAAAATTGTGACATACAAAATAAATCAGCATCACTGTAATTACTTTCTTTCCTTCATCCAGACTTTAATTTATAATCTTTTGTTGTCTGATTTATTAACATGTATATATTTGTAACATCAAAAAAACTCTTGCTGTTTTAATCTCTAATTGCTGCCAAAAGAAGGCTTCATCTTATTAATCTTTTTTCTTGATTCATAATAGGATGTTCACCGAATCTTGCACAAGGATGAGGATCATGAAGAGTTCAGAGGCTATTGGGTTAGGTATGCTGTGTTATGGCTTAAATAATTTCTTAATTTTGTTGTTCATTGATGTGAAATTTAAATCAGACAAGTTATAGTGGGATTTCATCTTCATGATTATTAGCTTTGAGAATATGGTCCTTTGTTTAGTGCTCTCTTAGTTAGTTACCATCATTATCTCTCCACTTCAAAAGTCTTTTTCTCAGAATTACTTGGCATCTATCATTTTCATAAAGTTTAACCCCCACTCCCAAAGAAAAAAGATCAAACAAATCAAAACATATTAGTTTAAATTCCATTGTGATCGGATCTTTTCACAGAGTTCATTATAATCTGATGCTTTGGCCATGCCATTACAAGGATGCTAATTCGTGATATTGATGGAGCAGTATAATATAAAGATGGAATCAGAATAAAAAAGAAAAAAAGAAACAGATTTCTTTCTCTTAGTAAAATTTTGGCCTTTTCTTTCTTTCTATTGCAGCTCCAAGGGCCATGGAGAAGTGCAAAAACCGTAACTAGCGAACACGTCTGCTATCCAATGCATCGATCATGCACGTTTGAGCGAATGATGTCCAAGGATATCGTATAATCTGCGTGCTGGAATTCATCGGGAGAATCTATACTGAATATTGATCTTCTTTGTGCATGAGTTCTAAATATCGGTAGTTGATGTATGGAGATAACTTATTTTTTAGCGAAGACGATTTTCGATAGGACGATTAACAGTTTCTTAGTTTGCCCCTCCCCCTCTTCTTTGTGATTTTACTTTGGTTGTTGTTGCTACACTTTACTTTGTATTGTAAATGGTTTGTTTGCTATGACAAGTGTATTCTCACCCTTCATATTTGCCTGGTCTTTCCCCCTTTTTTTCTTGCTTCTTCTGCTTCAAGTTCAAGCCTTCCAAAAAGAG

mRNA sequence

TTGCTTTTCAGTTTCAAACCCTAACCCTAATCCTGACCCTAACCCACCTCTGATTCTTCTGATTTCAATATGTTTTTGTCTCAAAATGAAATTTCAGATTCAGAAGAAGCTTTGCAGATTAGGGTTTGTATTTTATATATCTACGGTGTGTATGTTCATGTCAGCTTTCTCAAAATTCCCTCACTTTCCACGACATTGCGAAAAAAACCCCAACAAATCGGCCCAAATCATAAACCCTAGCGAAAAATTGGCTCATGGGGTTTTTAAATTCCTGCACATTGGGCTTCAAAATCCGAGAAAATCTGCCCCGTCCTATCCTTTTCCGCATTTCCCAGTGTTACGCTGCTTTCAATTTTTCTCTGTTTCGTGCTGTCGCTTGGCGCAGGTTAGCGATGAAGAAAAAAGCAAAACAAACATAGCACAGAGAAATAATATATTTTTTTTCTTTTTTGATTAAAGAAAAAAAAGGGCAATTGGGGAAAAGCTGGATGGAGACTTTCTGTGCTTTGTCGGGGTGGTTACCCACAAAAAGGTACATTGAATTATTGAAATCAAAACAAATCCTGAAAAGAATCATACTGTTCCATGTTTTCTCTTTTCTCTTTACCATTGTGCCTCTGCTTGTTTGTTTGTTTGTTTATTTATTTAGTCTTGTTGCTCTTGTTTTTCCTTTCATTTATCTCCCTCAGGGTCAGATTCACAGTTGTTGAGAAGTTCAGAGAGATCCCAACTGGGTTTTAACAATCTTGAAGAAGTGTTTTGATCTTCTTATCTTGTTCTTGTTCTTGTTGTTGTGATTTTTCCCCATGCTTTTTTGTGTGTTGCTCTTGAGTTTCTGATTTTTCTGATGTCTATACCGTTAGAACATGATTACATAGGGTTAACAGAGTCTGTTCCTTCTCTGGAAGGCTCTGAAAAGTCTTCTGATAGACGAAGTAATGGTGGGTTGAACCTTAAGGCTACTGAGCTGAGGTTGGGGTTGCCTGGGTCGGAGTCACCGGTGAGGGATGATGGCCTTGAGGACAATAATGGGTACCCTCTTAAGAGCTCTGTTTCTGGGGCTAAGAGGGGTTTCTCTGTAGCCATTGATAGAGCTTCTGCCAAGTGGGTTGCTGGATCTGAAGCTGATTCCACTAAAAATGGAGGCCTGTTTTCTCCCAGAGGAGTTATTGAGAATAAGGCTCAACCATCTGCTTCAGCTGTTTCTGGTGCTAAAGATGGTATTTCTCCAAAGCCATTGCATGAGGAGAAGCCTCAGCTTTCTCCCCCTGCAGCCAAGGCACAAGTTGTAGGATGGCCACCCATTCGATCTTTCCGTAAGAATTCAATGACAATACAACCCCCTAAAGATACTGATGATGGAGATGGTAAGATGGGATCGGGTTGCCTTTATGTCAAGGTAAGTATGGATGGCGCACCGTACCTTAGGAAGGTTGATCTGAAAACCTATGGAAGCTATGCAGACCTATCGTCGGCCCTGGACAAAATGTTCATCAGCTTCACAATTGGTCATTGTGGCTCCAATGGAGTTCCACACCGGGAAGCATTCAACGAGAGTCGATTGATGGATCTGCTCCATGGCTCTGAATATGTACTCACCTATGAAGACAAGGATGGTGATTGGATGCTCGTTGGAGATGTTCCATGGGAGATGTTCACCGAATCTTGCACAAGGATGAGGATCATGAAGAGTTCAGAGGCTATTGGGTTAGCTCCAAGGGCCATGGAGAAGTGCAAAAACCGTAACTAGCGAACACGTCTGCTATCCAATGCATCGATCATGCACGTTTGAGCGAATGATGTCCAAGGATATCGTATAATCTGCGTGCTGGAATTCATCGGGAGAATCTATACTGAATATTGATCTTCTTTGTGCATGAGTTCTAAATATCGGTAGTTGATGTATGGAGATAACTTATTTTTTAGCGAAGACGATTTTCGATAGGACGATTAACAGTTTCTTAGTTTGCCCCTCCCCCTCTTCTTTGTGATTTTACTTTGGTTGTTGTTGCTACACTTTACTTTGTATTGTAAATGGTTTGTTTGCTATGACAAGTGTATTCTCACCCTTCATATTTGCCTGGTCTTTCCCCCTTTTTTTCTTGCTTCTTCTGCTTCAAGTTCAAGCCTTCCAAAAAGAG

Coding sequence (CDS)

ATGTCTATACCGTTAGAACATGATTACATAGGGTTAACAGAGTCTGTTCCTTCTCTGGAAGGCTCTGAAAAGTCTTCTGATAGACGAAGTAATGGTGGGTTGAACCTTAAGGCTACTGAGCTGAGGTTGGGGTTGCCTGGGTCGGAGTCACCGGTGAGGGATGATGGCCTTGAGGACAATAATGGGTACCCTCTTAAGAGCTCTGTTTCTGGGGCTAAGAGGGGTTTCTCTGTAGCCATTGATAGAGCTTCTGCCAAGTGGGTTGCTGGATCTGAAGCTGATTCCACTAAAAATGGAGGCCTGTTTTCTCCCAGAGGAGTTATTGAGAATAAGGCTCAACCATCTGCTTCAGCTGTTTCTGGTGCTAAAGATGGTATTTCTCCAAAGCCATTGCATGAGGAGAAGCCTCAGCTTTCTCCCCCTGCAGCCAAGGCACAAGTTGTAGGATGGCCACCCATTCGATCTTTCCGTAAGAATTCAATGACAATACAACCCCCTAAAGATACTGATGATGGAGATGGTAAGATGGGATCGGGTTGCCTTTATGTCAAGGTAAGTATGGATGGCGCACCGTACCTTAGGAAGGTTGATCTGAAAACCTATGGAAGCTATGCAGACCTATCGTCGGCCCTGGACAAAATGTTCATCAGCTTCACAATTGGTCATTGTGGCTCCAATGGAGTTCCACACCGGGAAGCATTCAACGAGAGTCGATTGATGGATCTGCTCCATGGCTCTGAATATGTACTCACCTATGAAGACAAGGATGGTGATTGGATGCTCGTTGGAGATGTTCCATGGGAGATGTTCACCGAATCTTGCACAAGGATGAGGATCATGAAGAGTTCAGAGGCTATTGGGTTAGCTCCAAGGGCCATGGAGAAGTGCAAAAACCGTAACTAG

Protein sequence

MSIPLEHDYIGLTESVPSLEGSEKSSDRRSNGGLNLKATELRLGLPGSESPVRDDGLEDNNGYPLKSSVSGAKRGFSVAIDRASAKWVAGSEADSTKNGGLFSPRGVIENKAQPSASAVSGAKDGISPKPLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMTIQPPKDTDDGDGKMGSGCLYVKVSMDGAPYLRKVDLKTYGSYADLSSALDKMFISFTIGHCGSNGVPHREAFNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAMEKCKNRN

Homology

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BLAST of Sed0002458 vs. NCBI nr
Match: XP_022144958.1 (auxin-responsive protein IAA27-like [Momordica charantia] >XP_022144959.1 auxin-responsive protein IAA27-like [Momordica charantia])

HSP 1 Score: 536.6 bits (1381), Expect = 1.4e-148
Identity = 269/306 (87.91%), Postives = 281/306 (91.83%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTESVPSLEGSEKSSDRRSNGGLNLKATELRLGLPGSESPVRDDGLEDN 60
           MS+PLEHDYIGLTESVP LE SEKSSDRR+NGGLNLKATELRLGLPGSESP RDDGLEDN
Sbjct: 1   MSMPLEHDYIGLTESVPPLESSEKSSDRRNNGGLNLKATELRLGLPGSESPRRDDGLEDN 60

Query: 61  NGYPLKSSVSGAKRGFSVAIDRASAKWV----AGSEADSTKNGGLFSPRGVIENKAQPSA 120
           NGYPLKSSVSGAKRGFSVAIDRASAKWV    AGSEADS+K GGLFSPR    NK QPS+
Sbjct: 61  NGYPLKSSVSGAKRGFSVAIDRASAKWVLPSSAGSEADSSKPGGLFSPRVNENNKTQPSS 120

Query: 121 SAVSGAKDGISP--KPLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMTIQPPKDTDDGDG 180
           +AVSG KDGISP  KPLHEEKPQLS PAAKAQVVGWPPIRSFRKNSM  QPPK T+D DG
Sbjct: 121 TAVSGVKDGISPSAKPLHEEKPQLSAPAAKAQVVGWPPIRSFRKNSMATQPPKTTEDADG 180

Query: 181 KMGSGCLYVKVSMDGAPYLRKVDLKTYGSYADLSSALDKMFISFTIGHCGSNGVPHREAF 240
           K+GSGCLYVKVSMDGAPYLRKVDLKTYGSY +LSSAL+KMF SFT+GHCGSNGVP+R+A 
Sbjct: 181 KLGSGCLYVKVSMDGAPYLRKVDLKTYGSYVELSSALEKMFSSFTLGHCGSNGVPNRDAL 240

Query: 241 NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAME 300
           NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM 
Sbjct: 241 NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAMA 300

[Close]

BLAST of Sed0002458 vs. NCBI nr
Match: XP_038879206.1 (auxin-responsive protein IAA27 [Benincasa hispida])

HSP 1 Score: 535.0 bits (1377), Expect = 4.1e-148
Identity = 272/307 (88.60%), Postives = 281/307 (91.53%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTESVPSLEGSEKSSDRRSNGGLNLKATELRLGLPGSESPVRDDGLEDN 60
           MS PLEHDYIGLTESVPSLE SEKSSDR +N GLNLKATELRLGLPGSESP RDDG EDN
Sbjct: 1   MSTPLEHDYIGLTESVPSLESSEKSSDRHNNAGLNLKATELRLGLPGSESPGRDDGFEDN 60

Query: 61  NGYPLKSSVSGAKRGFSVAIDRASAKWV----AGSEADSTKNGGLFSPRGVIENKAQPSA 120
           +G+  KSSVSGAKRGFSVAIDRASAKWV    AGSEADS+KNGGLFSPRGV ENK Q  A
Sbjct: 61  SGFLHKSSVSGAKRGFSVAIDRASAKWVLPASAGSEADSSKNGGLFSPRGVNENKTQQPA 120

Query: 121 SAVSGAKDGISP--KP-LHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMTIQPPKDTDDGD 180
           SAVSG KDGISP  KP LHEEKPQLSPPAAKAQVVGWPPIRSFRKNSM  QPPK+TDD D
Sbjct: 121 SAVSGVKDGISPSAKPVLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDAD 180

Query: 181 GKMGSGCLYVKVSMDGAPYLRKVDLKTYGSYADLSSALDKMFISFTIGHCGSNGVPHREA 240
           GK+GSGCLYVKVSMDGAPYLRKVDLKTYGSYADLS AL+KMF SFTIGHCGSNGVP+R+A
Sbjct: 181 GKLGSGCLYVKVSMDGAPYLRKVDLKTYGSYADLSLALEKMFSSFTIGHCGSNGVPNRDA 240

Query: 241 FNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM 300
            NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM
Sbjct: 241 LNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM 300

[Close]

BLAST of Sed0002458 vs. NCBI nr
Match: TYJ98063.1 (auxin-responsive protein IAA27 [Cucumis melo var. makuwa])

HSP 1 Score: 533.5 bits (1373), Expect = 1.2e-147
Identity = 270/307 (87.95%), Postives = 281/307 (91.53%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTESVPSLEGSEKSSDRRSNGGLNLKATELRLGLPGSESPVRDDGLEDN 60
           MSIPLEHDYIGLTESVPSLE SEKSSD+R+N GLNLKATELRLGLPGSESPVRDDG EDN
Sbjct: 1   MSIPLEHDYIGLTESVPSLESSEKSSDKRNNAGLNLKATELRLGLPGSESPVRDDGFEDN 60

Query: 61  NGYPLKSSVSGAKRGFSVAIDRASAKWV----AGSEADSTKNGGLFSPRGVIENKAQPSA 120
           NG+  KS VSGAKRGFS+AIDRASAKWV    AGSEADS+ NGGLFSPRGV ENK QP A
Sbjct: 61  NGFLHKSPVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPPA 120

Query: 121 SAVSGAKDGISP--KP-LHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMTIQPPKDTDDGD 180
           SAV G KDGISP  KP L+EEKPQLSPPAAKAQVVGWPPIRSFRKNSM  QPPK+TDD D
Sbjct: 121 SAVPGVKDGISPSAKPVLNEEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDAD 180

Query: 181 GKMGSGCLYVKVSMDGAPYLRKVDLKTYGSYADLSSALDKMFISFTIGHCGSNGVPHREA 240
           GK+GSGCLYVKVSMDGAPYLRKVDLKTY SY DLSSAL+KMF SFTIGHCGSNGVP+R+A
Sbjct: 181 GKLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHCGSNGVPNRDA 240

Query: 241 FNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM 300
            NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM
Sbjct: 241 LNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM 300

[Close]

BLAST of Sed0002458 vs. NCBI nr
Match: XP_004150556.1 (auxin-responsive protein IAA27 [Cucumis sativus] >KGN65095.1 hypothetical protein Csa_021512 [Cucumis sativus])

HSP 1 Score: 533.5 bits (1373), Expect = 1.2e-147
Identity = 269/306 (87.91%), Postives = 280/306 (91.50%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTESVPSLEGSEKSSDRRSNGGLNLKATELRLGLPGSESPVRDDGLEDN 60
           MSIPLEHDYIGLTESVPSLE SEKSSD+R++ GLNLKATELRLGLPGSESP RDDG ED 
Sbjct: 1   MSIPLEHDYIGLTESVPSLENSEKSSDKRNSAGLNLKATELRLGLPGSESPGRDDGFEDK 60

Query: 61  NGYPLKSSVSGAKRGFSVAIDRASAKWV----AGSEADSTKNGGLFSPRGVIENKAQPSA 120
           NG+  KSSVSGAKRGFS+AIDRASAKWV    AGSEADS+ NGGLFSPRGV ENK QP A
Sbjct: 61  NGFLHKSSVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPPA 120

Query: 121 SAVSGAKDGISP--KPLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMTIQPPKDTDDGDG 180
           SAVSG KDGISP  KPLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSM  QPPK+TDD DG
Sbjct: 121 SAVSGVKDGISPSAKPLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDADG 180

Query: 181 KMGSGCLYVKVSMDGAPYLRKVDLKTYGSYADLSSALDKMFISFTIGHCGSNGVPHREAF 240
           K+GSGCLYVKVSMDGAPYLRKVDLKTY SY DLSSAL+KMF SFTIGH GSNGVP+R+A 
Sbjct: 181 KLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHYGSNGVPNRDAL 240

Query: 241 NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAME 300
           NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAME
Sbjct: 241 NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAME 300

[Close]

BLAST of Sed0002458 vs. NCBI nr
Match: XP_008462746.1 (PREDICTED: auxin-responsive protein IAA27 [Cucumis melo])

HSP 1 Score: 530.8 bits (1366), Expect = 7.7e-147
Identity = 269/307 (87.62%), Postives = 280/307 (91.21%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTESVPSLEGSEKSSDRRSNGGLNLKATELRLGLPGSESPVRDDGLEDN 60
           MSIPLEHDYIGLTESVPSLE SEKSSD+R+N GLNLKATELRLGLPGSESP RDDG EDN
Sbjct: 1   MSIPLEHDYIGLTESVPSLESSEKSSDKRNNAGLNLKATELRLGLPGSESPGRDDGFEDN 60

Query: 61  NGYPLKSSVSGAKRGFSVAIDRASAKWV----AGSEADSTKNGGLFSPRGVIENKAQPSA 120
           NG+  KS VSGAKRGFS+AIDRASAKWV    AGSEADS+ NGGLFSPRGV ENK QP A
Sbjct: 61  NGFLHKSPVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPPA 120

Query: 121 SAVSGAKDGISP--KP-LHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMTIQPPKDTDDGD 180
           SAV G KDGISP  KP L+EEKPQLSPPAAKAQVVGWPPIRSFRKNSM  QPPK+TDD D
Sbjct: 121 SAVPGVKDGISPSAKPVLNEEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDAD 180

Query: 181 GKMGSGCLYVKVSMDGAPYLRKVDLKTYGSYADLSSALDKMFISFTIGHCGSNGVPHREA 240
           GK+GSGCLYVKVSMDGAPYLRKVDLKTY SY DLSSAL+KMF SFTIGHCGSNGVP+R+A
Sbjct: 181 GKLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHCGSNGVPNRDA 240

Query: 241 FNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM 300
            NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM
Sbjct: 241 LNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM 300

[Close]

BLAST of Sed0002458 vs. ExPASy Swiss-Prot
Match: Q9ZSY8 (Auxin-responsive protein IAA27 OS=Arabidopsis thaliana OX=3702 GN=IAA27 PE=1 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 3.8e-80
Identity = 181/316 (57.28%), Postives = 211/316 (66.77%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTESVPSLEG---SEKSSDRRSNGGLNLKATELRLGLPGSESPVRDDG- 60
           +S+  EHDYIGL+E  P++E    S+K+  R +N GLN KATELRLGLPGSESP R D  
Sbjct: 3   VSVAAEHDYIGLSE-FPTMEATTMSDKTKTRDNNNGLNFKATELRLGLPGSESPERVDSR 62

Query: 61  -LEDNNGYPLKSSVSGAKRGFSVAIDRASAKWVAGSEADSTKNGGLFSPRGVIENKAQPS 120
            L  N        VSGAKR FS AI+  S KWV  S   +T  G + S  G       P 
Sbjct: 63  FLALNKS---SCPVSGAKRVFSDAIN-DSNKWVF-SPGSTTATGDVGSGSG-------PR 122

Query: 121 ASAVSGAKDGISPK---PLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMT---IQPP--- 180
            S V   K     K   P+ E+K   + PA+KAQVVGWPPIRSFRKNSM     Q P   
Sbjct: 123 TSVVKDGKSTTFTKPAVPVKEKKSSATAPASKAQVVGWPPIRSFRKNSMASSQSQKPGNN 182

Query: 181 KDTDDGDGKMG--SGCLYVKVSMDGAPYLRKVDLKTYGSYADLSSALDKMFISFTIGHCG 240
            +T++ + K G    CLYVKVSM+GAPYLRK+DLKTY SY +LSSAL+KMF  FTIG  G
Sbjct: 183 SETEEAEAKSGPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIGQFG 242

Query: 241 SNGVPHREAFNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSE 300
           S+G   R+  NESRL DLL GSEYV+TYEDKD DWMLVGDVPWEMF  SC ++RIMKSSE
Sbjct: 243 SHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSE 302

[Close]

BLAST of Sed0002458 vs. ExPASy Swiss-Prot
Match: Q38826 (Auxin-responsive protein IAA8 OS=Arabidopsis thaliana OX=3702 GN=IAA8 PE=1 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 1.8e-69
Identity = 159/315 (50.48%), Postives = 194/315 (61.59%), Query Frame = 0


Query: 6   EHDYIGLTESVPSLEGSEKSSDRRSNGGLNLKATELRLGLPGSESPVR--DDGL------ 65
           E +Y+GL++   S   S    +      LN KATELRLGLP S+SP R  D GL      
Sbjct: 21  ERNYLGLSDC--SSVDSSTIPNVVGKSNLNFKATELRLGLPESQSPERETDFGLLSPRTP 80

Query: 66  EDNNGYPL-------------KSSVSGAKRGFSVAIDRASAKWVAGSEADSTKNGGLFSP 125
           ++   +PL             K+ VSG KRGF+   D  S   V GS            P
Sbjct: 81  DEKLLFPLLPSKDNGSATTGHKNVVSGNKRGFADTWDEFSG--VKGS----------VRP 140

Query: 126 RGVIENKAQPSASAVSGAKDGISPKPLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMTIQ 185
            G I     P    VS     I  +  H +    + PAAKAQVVGWPPIRS+RKN+M   
Sbjct: 141 GGGINMMLSPKVKDVS---KSIQEERSHAKGGLNNAPAAKAQVVGWPPIRSYRKNTMASS 200

Query: 186 PPKDTDDGDGKMGSGCLYVKVSMDGAPYLRKVDLKTYGSYADLSSALDKMFISFTIGHCG 245
             K+TD+ DGK G G L+VKVSMDGAPYLRKVDL+TY SY  LSSAL+KMF  FT+G CG
Sbjct: 201 TSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCG 260

Query: 246 SNGVPHREAFNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSE 300
            +G   RE  +E +L DLLHGSE+VLTYEDKDGDWMLVGDVPWE+FTE+C +++IMK S+
Sbjct: 261 LHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSD 318

[Close]

BLAST of Sed0002458 vs. ExPASy Swiss-Prot
Match: Q38827 (Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 7.4e-68
Identity = 153/324 (47.22%), Postives = 206/324 (63.58%), Query Frame = 0


Query: 6   EHDYIGLTE--SVPSLEGSEKSSDRRSNGGLNLKATELRLGLPGSESPVRDD-------- 65
           EH+Y+GL++  SV S   S  + D ++   ++LKATEL LGLPGS+SP RD         
Sbjct: 33  EHNYLGLSDCSSVGSSTLSPLAEDDKAT--ISLKATELTLGLPGSQSPARDTELNLLSPA 92

Query: 66  GLEDNNGYPL------------KSSVSGAKRGFSVAIDR-ASAKWVAGSEADSTKNGGLF 125
            L++   +PL            K++ SG KRGFS  +D+ A AK    +E          
Sbjct: 93  KLDEKPFFPLLPSKDEICSSSQKNNASGNKRGFSDTMDQFAEAKSSVYTE---------- 152

Query: 126 SPRGVIENKAQPSASAVSGAKDGISPKPLHEEKPQL-----SPPAAKAQVVGWPPIRSFR 185
                 +N   P A+A         P+ + + +        SPPAAKAQ+VGWPP+RS+R
Sbjct: 153 ------KNWMFPEAAATQSVTKKDVPQNIPKGQSSTTNNSSSPPAAKAQIVGWPPVRSYR 212

Query: 186 KNSMTIQPPKDTDDGDGKMGSGCLYVKVSMDGAPYLRKVDLKTYGSYADLSSALDKMFIS 245
           KN++     K++D+ DG+ GSG L+VKVSMDGAPYLRKVDL++Y +Y +LSSAL+KMF +
Sbjct: 213 KNTLA-TTCKNSDEVDGRPGSGALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTT 272

Query: 246 FTIGHCGSNGVPHREAFNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRM 300
           FT+G CGSNG   ++  +E++L DLL+G +YVLTYEDKDGDWMLVGDVPWEMF + C ++
Sbjct: 273 FTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKL 332

[Close]

BLAST of Sed0002458 vs. ExPASy Swiss-Prot
Match: Q5Z749 (Auxin-responsive protein IAA21 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA21 PE=2 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 2.6e-65
Identity = 152/309 (49.19%), Postives = 183/309 (59.22%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTESVPSLEGSEKSSDRRSNGGLNLKATELRLGLPGS--ESPVRDDGLE 60
           M+ P E DYIGL+ +  +                   ATELRLGLPG+  E+     G  
Sbjct: 1   MAPPQERDYIGLSPAAAA-----------------ALATELRLGLPGTAEEAESEGGGGG 60

Query: 61  DNNGYPLKSSV---SGAKRGFSVAIDRASAKWVAGSEADSTKNGGLFSPRGVIENKAQPS 120
             +  PL   +    GAKRGF+ AI       V G             P G     A   
Sbjct: 61  GTDAAPLTLELLPKGGAKRGFADAI-------VGG-------------PAGQRREAAGGK 120

Query: 121 ASAVSGAKDGISPKPLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMTIQPP--KDTDDGD 180
           A+A +   +        EEK +   PAAKAQVVGWPPIRS+RKN+M +  P  K  DDG+
Sbjct: 121 AAAAAAEAEE------EEEKKKAQAPAAKAQVVGWPPIRSYRKNTMAMSQPALKGKDDGE 180

Query: 181 GKM--GSGCLYVKVSMDGAPYLRKVDLKTYGSYADLSSALDKMFISFTIGHCGSNGVPHR 240
            K    SGCLYVKVSMDGAPYLRKVDLK Y +Y +LS AL+KMF  FT+GH  SNG   R
Sbjct: 181 AKQAPASGCLYVKVSMDGAPYLRKVDLKMYKNYKELSLALEKMFSCFTVGHGESNGKSGR 240

Query: 241 EAFNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPR 300
           +  ++ RLMDL +G+E VLTYEDKD DWMLVGDVPW MFT+SC R+RIMK S+A+GLAPR
Sbjct: 241 DGLSDCRLMDLKNGTELVLTYEDKDEDWMLVGDVPWRMFTDSCRRLRIMKGSDAVGLAPR 266

[Close]

BLAST of Sed0002458 vs. ExPASy Swiss-Prot
Match: P0C132 (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA30 PE=2 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 7.6e-65
Identity = 149/288 (51.74%), Postives = 176/288 (61.11%), Query Frame = 0


Query: 34  LNLKATELRLGLPGSESPVRDDGLEDNNGYPLKSSVSGAKRGFSVAID--RASAKWVAGS 93
           L  +ATELRLGLPG        G  D +     +  S  KRGF+  ID         A  
Sbjct: 5   LAFEATELRLGLPG--------GGGDGDAAAAAARSSSGKRGFAETIDLKLKLEPAAAAV 64

Query: 94  EADSTKNGGLFSPR-------GVIENKAQPSASAVSG------AKDGISPKPLHEEKPQL 153
           + D  K       R       G   + A P A+A +G      ++  +       EKP+ 
Sbjct: 65  DDDDDKEEAAADDREKKVDIVGADNDDASPPAAAAAGGMKRSPSQSSVVTAAADPEKPR- 124

Query: 154 SPPAAKAQVVGWPPIRSFRKNSMTIQPPKDTDDGDG---KMGSG---CLYVKVSMDGAPY 213
              A KAQVVGWPP+RS+RKN + +Q  K  D  DG   K G+G     +VKVSMDGAPY
Sbjct: 125 ---APKAQVVGWPPVRSYRKNILAVQADKGKDAADGGGDKSGAGAAAAAFVKVSMDGAPY 184

Query: 214 LRKVDLKTYGSYADLSSALDKMFISFTIGHCGSNGVPHREAFNESRLMDLLHGSEYVLTY 273
           LRKVDLK Y SY +LS AL+KMF SFTIG+CGS+GV      NES++ DLL+GSEYV TY
Sbjct: 185 LRKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGV---NGMNESKIADLLNGSEYVPTY 244

Query: 274 EDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAMEKCKNRN 301
           EDKDGDWMLVGDVPWEMF ESC R+RIMK SEAIGLAPRAMEKCKNR+
Sbjct: 245 EDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKCKNRS 277

[Close]

BLAST of Sed0002458 vs. ExPASy TrEMBL
Match: A0A6J1CTT1 (Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111014504 PE=3 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 6.8e-149
Identity = 269/306 (87.91%), Postives = 281/306 (91.83%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTESVPSLEGSEKSSDRRSNGGLNLKATELRLGLPGSESPVRDDGLEDN 60
           MS+PLEHDYIGLTESVP LE SEKSSDRR+NGGLNLKATELRLGLPGSESP RDDGLEDN
Sbjct: 1   MSMPLEHDYIGLTESVPPLESSEKSSDRRNNGGLNLKATELRLGLPGSESPRRDDGLEDN 60

Query: 61  NGYPLKSSVSGAKRGFSVAIDRASAKWV----AGSEADSTKNGGLFSPRGVIENKAQPSA 120
           NGYPLKSSVSGAKRGFSVAIDRASAKWV    AGSEADS+K GGLFSPR    NK QPS+
Sbjct: 61  NGYPLKSSVSGAKRGFSVAIDRASAKWVLPSSAGSEADSSKPGGLFSPRVNENNKTQPSS 120

Query: 121 SAVSGAKDGISP--KPLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMTIQPPKDTDDGDG 180
           +AVSG KDGISP  KPLHEEKPQLS PAAKAQVVGWPPIRSFRKNSM  QPPK T+D DG
Sbjct: 121 TAVSGVKDGISPSAKPLHEEKPQLSAPAAKAQVVGWPPIRSFRKNSMATQPPKTTEDADG 180

Query: 181 KMGSGCLYVKVSMDGAPYLRKVDLKTYGSYADLSSALDKMFISFTIGHCGSNGVPHREAF 240
           K+GSGCLYVKVSMDGAPYLRKVDLKTYGSY +LSSAL+KMF SFT+GHCGSNGVP+R+A 
Sbjct: 181 KLGSGCLYVKVSMDGAPYLRKVDLKTYGSYVELSSALEKMFSSFTLGHCGSNGVPNRDAL 240

Query: 241 NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAME 300
           NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM 
Sbjct: 241 NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAMA 300

[Close]

BLAST of Sed0002458 vs. ExPASy TrEMBL
Match: A0A5D3BFM3 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold369G00160 PE=3 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 5.7e-148
Identity = 270/307 (87.95%), Postives = 281/307 (91.53%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTESVPSLEGSEKSSDRRSNGGLNLKATELRLGLPGSESPVRDDGLEDN 60
           MSIPLEHDYIGLTESVPSLE SEKSSD+R+N GLNLKATELRLGLPGSESPVRDDG EDN
Sbjct: 1   MSIPLEHDYIGLTESVPSLESSEKSSDKRNNAGLNLKATELRLGLPGSESPVRDDGFEDN 60

Query: 61  NGYPLKSSVSGAKRGFSVAIDRASAKWV----AGSEADSTKNGGLFSPRGVIENKAQPSA 120
           NG+  KS VSGAKRGFS+AIDRASAKWV    AGSEADS+ NGGLFSPRGV ENK QP A
Sbjct: 61  NGFLHKSPVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPPA 120

Query: 121 SAVSGAKDGISP--KP-LHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMTIQPPKDTDDGD 180
           SAV G KDGISP  KP L+EEKPQLSPPAAKAQVVGWPPIRSFRKNSM  QPPK+TDD D
Sbjct: 121 SAVPGVKDGISPSAKPVLNEEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDAD 180

Query: 181 GKMGSGCLYVKVSMDGAPYLRKVDLKTYGSYADLSSALDKMFISFTIGHCGSNGVPHREA 240
           GK+GSGCLYVKVSMDGAPYLRKVDLKTY SY DLSSAL+KMF SFTIGHCGSNGVP+R+A
Sbjct: 181 GKLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHCGSNGVPNRDA 240

Query: 241 FNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM 300
            NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM
Sbjct: 241 LNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM 300

[Close]

BLAST of Sed0002458 vs. ExPASy TrEMBL
Match: A0A0A0LT68 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_1G207820 PE=3 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 5.7e-148
Identity = 269/306 (87.91%), Postives = 280/306 (91.50%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTESVPSLEGSEKSSDRRSNGGLNLKATELRLGLPGSESPVRDDGLEDN 60
           MSIPLEHDYIGLTESVPSLE SEKSSD+R++ GLNLKATELRLGLPGSESP RDDG ED 
Sbjct: 1   MSIPLEHDYIGLTESVPSLENSEKSSDKRNSAGLNLKATELRLGLPGSESPGRDDGFEDK 60

Query: 61  NGYPLKSSVSGAKRGFSVAIDRASAKWV----AGSEADSTKNGGLFSPRGVIENKAQPSA 120
           NG+  KSSVSGAKRGFS+AIDRASAKWV    AGSEADS+ NGGLFSPRGV ENK QP A
Sbjct: 61  NGFLHKSSVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPPA 120

Query: 121 SAVSGAKDGISP--KPLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMTIQPPKDTDDGDG 180
           SAVSG KDGISP  KPLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSM  QPPK+TDD DG
Sbjct: 121 SAVSGVKDGISPSAKPLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDADG 180

Query: 181 KMGSGCLYVKVSMDGAPYLRKVDLKTYGSYADLSSALDKMFISFTIGHCGSNGVPHREAF 240
           K+GSGCLYVKVSMDGAPYLRKVDLKTY SY DLSSAL+KMF SFTIGH GSNGVP+R+A 
Sbjct: 181 KLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHYGSNGVPNRDAL 240

Query: 241 NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAME 300
           NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAME
Sbjct: 241 NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAME 300

[Close]

BLAST of Sed0002458 vs. ExPASy TrEMBL
Match: A0A1S3CHQ1 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103501033 PE=3 SV=1)

HSP 1 Score: 530.8 bits (1366), Expect = 3.7e-147
Identity = 269/307 (87.62%), Postives = 280/307 (91.21%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTESVPSLEGSEKSSDRRSNGGLNLKATELRLGLPGSESPVRDDGLEDN 60
           MSIPLEHDYIGLTESVPSLE SEKSSD+R+N GLNLKATELRLGLPGSESP RDDG EDN
Sbjct: 1   MSIPLEHDYIGLTESVPSLESSEKSSDKRNNAGLNLKATELRLGLPGSESPGRDDGFEDN 60

Query: 61  NGYPLKSSVSGAKRGFSVAIDRASAKWV----AGSEADSTKNGGLFSPRGVIENKAQPSA 120
           NG+  KS VSGAKRGFS+AIDRASAKWV    AGSEADS+ NGGLFSPRGV ENK QP A
Sbjct: 61  NGFLHKSPVSGAKRGFSIAIDRASAKWVLPASAGSEADSSTNGGLFSPRGVNENKTQPPA 120

Query: 121 SAVSGAKDGISP--KP-LHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMTIQPPKDTDDGD 180
           SAV G KDGISP  KP L+EEKPQLSPPAAKAQVVGWPPIRSFRKNSM  QPPK+TDD D
Sbjct: 121 SAVPGVKDGISPSAKPVLNEEKPQLSPPAAKAQVVGWPPIRSFRKNSMATQPPKNTDDAD 180

Query: 181 GKMGSGCLYVKVSMDGAPYLRKVDLKTYGSYADLSSALDKMFISFTIGHCGSNGVPHREA 240
           GK+GSGCLYVKVSMDGAPYLRKVDLKTY SY DLSSAL+KMF SFTIGHCGSNGVP+R+A
Sbjct: 181 GKLGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHCGSNGVPNRDA 240

Query: 241 FNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM 300
            NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM
Sbjct: 241 LNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAM 300

[Close]

BLAST of Sed0002458 vs. ExPASy TrEMBL
Match: A0A6J1JBD0 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111485238 PE=3 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 1.6e-145
Identity = 263/306 (85.95%), Postives = 276/306 (90.20%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTESVPSLEGSEKSSDRRSNGGLNLKATELRLGLPGSESPVRDDGLEDN 60
           MS PLEHDYIGLTES+PS E SE SSDR ++ GLNLKATELRLGLPGSESPVR DG++DN
Sbjct: 1   MSTPLEHDYIGLTESIPSQETSETSSDRPNSAGLNLKATELRLGLPGSESPVRHDGVDDN 60

Query: 61  NGYPLKSSVSGAKRGFSVAIDRASAKWV----AGSEADSTKNGGLFSPRGVIENKAQPSA 120
           NGYP K+S+SGAKRGFSVAIDRASAKWV    AGSEADSTKNGGLFSPRGV ENK QP  
Sbjct: 61  NGYPHKTSISGAKRGFSVAIDRASAKWVLPTSAGSEADSTKNGGLFSPRGVNENKTQPPV 120

Query: 121 SAVSGAKDGISP--KPLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMTIQPPKDTDDGDG 180
           SAVSG KDGISP  KPLHEEKPQLS PAAKAQVVGWPPIRSFRKNSM  QPPK T+D +G
Sbjct: 121 SAVSGVKDGISPSAKPLHEEKPQLSAPAAKAQVVGWPPIRSFRKNSMATQPPKTTEDAEG 180

Query: 181 KMGSGCLYVKVSMDGAPYLRKVDLKTYGSYADLSSALDKMFISFTIGHCGSNGVPHREAF 240
           K GSGCLYVKVSMDGAPYLRKVDLKTY SY DLSSAL+KMF SFTIGHCGSNG P+R+A 
Sbjct: 181 KSGSGCLYVKVSMDGAPYLRKVDLKTYVSYVDLSSALEKMFSSFTIGHCGSNGFPNRDAL 240

Query: 241 NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAME 300
           NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAME
Sbjct: 241 NESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSEAIGLAPRAME 300

[Close]

BLAST of Sed0002458 vs. TAIR 10
Match: AT4G29080.1 (phytochrome-associated protein 2 )

HSP 1 Score: 299.7 bits (766), Expect = 2.7e-81
Identity = 181/316 (57.28%), Postives = 211/316 (66.77%), Query Frame = 0


Query: 1   MSIPLEHDYIGLTESVPSLEG---SEKSSDRRSNGGLNLKATELRLGLPGSESPVRDDG- 60
           +S+  EHDYIGL+E  P++E    S+K+  R +N GLN KATELRLGLPGSESP R D  
Sbjct: 3   VSVAAEHDYIGLSE-FPTMEATTMSDKTKTRDNNNGLNFKATELRLGLPGSESPERVDSR 62

Query: 61  -LEDNNGYPLKSSVSGAKRGFSVAIDRASAKWVAGSEADSTKNGGLFSPRGVIENKAQPS 120
            L  N        VSGAKR FS AI+  S KWV  S   +T  G + S  G       P 
Sbjct: 63  FLALNKS---SCPVSGAKRVFSDAIN-DSNKWVF-SPGSTTATGDVGSGSG-------PR 122

Query: 121 ASAVSGAKDGISPK---PLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMT---IQPP--- 180
            S V   K     K   P+ E+K   + PA+KAQVVGWPPIRSFRKNSM     Q P   
Sbjct: 123 TSVVKDGKSTTFTKPAVPVKEKKSSATAPASKAQVVGWPPIRSFRKNSMASSQSQKPGNN 182

Query: 181 KDTDDGDGKMG--SGCLYVKVSMDGAPYLRKVDLKTYGSYADLSSALDKMFISFTIGHCG 240
            +T++ + K G    CLYVKVSM+GAPYLRK+DLKTY SY +LSSAL+KMF  FTIG  G
Sbjct: 183 SETEEAEAKSGPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIGQFG 242

Query: 241 SNGVPHREAFNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSE 300
           S+G   R+  NESRL DLL GSEYV+TYEDKD DWMLVGDVPWEMF  SC ++RIMKSSE
Sbjct: 243 SHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSE 302

[Close]

BLAST of Sed0002458 vs. TAIR 10
Match: AT2G22670.1 (indoleacetic acid-induced protein 8 )

HSP 1 Score: 264.2 bits (674), Expect = 1.2e-70
Identity = 159/315 (50.48%), Postives = 194/315 (61.59%), Query Frame = 0


Query: 6   EHDYIGLTESVPSLEGSEKSSDRRSNGGLNLKATELRLGLPGSESPVR--DDGL------ 65
           E +Y+GL++   S   S    +      LN KATELRLGLP S+SP R  D GL      
Sbjct: 21  ERNYLGLSDC--SSVDSSTIPNVVGKSNLNFKATELRLGLPESQSPERETDFGLLSPRTP 80

Query: 66  EDNNGYPL-------------KSSVSGAKRGFSVAIDRASAKWVAGSEADSTKNGGLFSP 125
           ++   +PL             K+ VSG KRGF+   D  S   V GS            P
Sbjct: 81  DEKLLFPLLPSKDNGSATTGHKNVVSGNKRGFADTWDEFSG--VKGS----------VRP 140

Query: 126 RGVIENKAQPSASAVSGAKDGISPKPLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMTIQ 185
            G I     P    VS     I  +  H +    + PAAKAQVVGWPPIRS+RKN+M   
Sbjct: 141 GGGINMMLSPKVKDVS---KSIQEERSHAKGGLNNAPAAKAQVVGWPPIRSYRKNTMASS 200

Query: 186 PPKDTDDGDGKMGSGCLYVKVSMDGAPYLRKVDLKTYGSYADLSSALDKMFISFTIGHCG 245
             K+TD+ DGK G G L+VKVSMDGAPYLRKVDL+TY SY  LSSAL+KMF  FT+G CG
Sbjct: 201 TSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCG 260

Query: 246 SNGVPHREAFNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSE 300
            +G   RE  +E +L DLLHGSE+VLTYEDKDGDWMLVGDVPWE+FTE+C +++IMK S+
Sbjct: 261 LHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSD 318

[Close]

BLAST of Sed0002458 vs. TAIR 10
Match: AT2G22670.3 (indoleacetic acid-induced protein 8 )

HSP 1 Score: 264.2 bits (674), Expect = 1.2e-70
Identity = 159/315 (50.48%), Postives = 194/315 (61.59%), Query Frame = 0


Query: 6   EHDYIGLTESVPSLEGSEKSSDRRSNGGLNLKATELRLGLPGSESPVR--DDGL------ 65
           E +Y+GL++   S   S    +      LN KATELRLGLP S+SP R  D GL      
Sbjct: 21  ERNYLGLSDC--SSVDSSTIPNVVGKSNLNFKATELRLGLPESQSPERETDFGLLSPRTP 80

Query: 66  EDNNGYPL-------------KSSVSGAKRGFSVAIDRASAKWVAGSEADSTKNGGLFSP 125
           ++   +PL             K+ VSG KRGF+   D  S   V GS            P
Sbjct: 81  DEKLLFPLLPSKDNGSATTGHKNVVSGNKRGFADTWDEFSG--VKGS----------VRP 140

Query: 126 RGVIENKAQPSASAVSGAKDGISPKPLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMTIQ 185
            G I     P    VS     I  +  H +    + PAAKAQVVGWPPIRS+RKN+M   
Sbjct: 141 GGGINMMLSPKVKDVS---KSIQEERSHAKGGLNNAPAAKAQVVGWPPIRSYRKNTMASS 200

Query: 186 PPKDTDDGDGKMGSGCLYVKVSMDGAPYLRKVDLKTYGSYADLSSALDKMFISFTIGHCG 245
             K+TD+ DGK G G L+VKVSMDGAPYLRKVDL+TY SY  LSSAL+KMF  FT+G CG
Sbjct: 201 TSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCG 260

Query: 246 SNGVPHREAFNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSE 300
            +G   RE  +E +L DLLHGSE+VLTYEDKDGDWMLVGDVPWE+FTE+C +++IMK S+
Sbjct: 261 LHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSD 318

[Close]

BLAST of Sed0002458 vs. TAIR 10
Match: AT2G22670.4 (indoleacetic acid-induced protein 8 )

HSP 1 Score: 264.2 bits (674), Expect = 1.2e-70
Identity = 159/315 (50.48%), Postives = 194/315 (61.59%), Query Frame = 0


Query: 6   EHDYIGLTESVPSLEGSEKSSDRRSNGGLNLKATELRLGLPGSESPVR--DDGL------ 65
           E +Y+GL++   S   S    +      LN KATELRLGLP S+SP R  D GL      
Sbjct: 38  ERNYLGLSDC--SSVDSSTIPNVVGKSNLNFKATELRLGLPESQSPERETDFGLLSPRTP 97

Query: 66  EDNNGYPL-------------KSSVSGAKRGFSVAIDRASAKWVAGSEADSTKNGGLFSP 125
           ++   +PL             K+ VSG KRGF+   D  S   V GS            P
Sbjct: 98  DEKLLFPLLPSKDNGSATTGHKNVVSGNKRGFADTWDEFSG--VKGS----------VRP 157

Query: 126 RGVIENKAQPSASAVSGAKDGISPKPLHEEKPQLSPPAAKAQVVGWPPIRSFRKNSMTIQ 185
            G I     P    VS     I  +  H +    + PAAKAQVVGWPPIRS+RKN+M   
Sbjct: 158 GGGINMMLSPKVKDVS---KSIQEERSHAKGGLNNAPAAKAQVVGWPPIRSYRKNTMASS 217

Query: 186 PPKDTDDGDGKMGSGCLYVKVSMDGAPYLRKVDLKTYGSYADLSSALDKMFISFTIGHCG 245
             K+TD+ DGK G G L+VKVSMDGAPYLRKVDL+TY SY  LSSAL+KMF  FT+G CG
Sbjct: 218 TSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCG 277

Query: 246 SNGVPHREAFNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRMRIMKSSE 300
            +G   RE  +E +L DLLHGSE+VLTYEDKDGDWMLVGDVPWE+FTE+C +++IMK S+
Sbjct: 278 LHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSD 335

[Close]

BLAST of Sed0002458 vs. TAIR 10
Match: AT5G65670.2 (indole-3-acetic acid inducible 9 )

HSP 1 Score: 263.8 bits (673), Expect = 1.6e-70
Identity = 153/322 (47.52%), Postives = 206/322 (63.98%), Query Frame = 0


Query: 6   EHDYIGLTE--SVPSLEGSEKSSDRRSNGGLNLKATELRLGLPGSESPVRDD-------- 65
           EH+Y+GL++  SV S   S  + D ++   ++LKATEL LGLPGS+SP RD         
Sbjct: 33  EHNYLGLSDCSSVGSSTLSPLAEDDKAT--ISLKATELTLGLPGSQSPARDTELNLLSPA 92

Query: 66  GLEDNNGYPL------------KSSVSGAKRGFSVAIDR-ASAKWVAGSEADSTKNGGLF 125
            L++   +PL            K++ SG KRGFS  +D+ A AK    +E          
Sbjct: 93  KLDEKPFFPLLPSKDEICSSSQKNNASGNKRGFSDTMDQFAEAKSSVYTE---------- 152

Query: 126 SPRGVIENKAQPSASAVSGAKDGISPKPLHEEKPQL-----SPPAAKAQVVGWPPIRSFR 185
                 +N   P A+A         P+ + + +        SPPAAKAQ+VGWPP+RS+R
Sbjct: 153 ------KNWMFPEAAATQSVTKKDVPQNIPKGQSSTTNNSSSPPAAKAQIVGWPPVRSYR 212

Query: 186 KNSMTIQPPKDTDDGDGKMGSGCLYVKVSMDGAPYLRKVDLKTYGSYADLSSALDKMFIS 245
           KN++     K++D+ DG+ GSG L+VKVSMDGAPYLRKVDL++Y +Y +LSSAL+KMF +
Sbjct: 213 KNTLA-TTCKNSDEVDGRPGSGALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTT 272

Query: 246 FTIGHCGSNGVPHREAFNESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCTRM 300
           FT+G CGSNG   ++  +E++L DLL+G +YVLTYEDKDGDWMLVGDVPWEMF + C ++
Sbjct: 273 FTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKL 332

The following BLAST results are available for this feature:

BLAST of Sed0002458 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144958.1	1.4e-148	87.91	auxin-responsive protein IAA27-like [Momordica charantia] >XP_022144959.1 auxin-...	[more]
XP_038879206.1	4.1e-148	88.60	auxin-responsive protein IAA27 [Benincasa hispida]	[more]
TYJ98063.1	1.2e-147	87.95	auxin-responsive protein IAA27 [Cucumis melo var. makuwa]	[more]
XP_004150556.1	1.2e-147	87.91	auxin-responsive protein IAA27 [Cucumis sativus] >KGN65095.1 hypothetical protei...	[more]
XP_008462746.1	7.7e-147	87.62	PREDICTED: auxin-responsive protein IAA27 [Cucumis melo]	[more]

BLAST of Sed0002458 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZSY8	3.8e-80	57.28	Auxin-responsive protein IAA27 OS=Arabidopsis thaliana OX=3702 GN=IAA27 PE=1 SV=...	[more]
Q38826	1.8e-69	50.48	Auxin-responsive protein IAA8 OS=Arabidopsis thaliana OX=3702 GN=IAA8 PE=1 SV=1	[more]
Q38827	7.4e-68	47.22	Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1	[more]
Q5Z749	2.6e-65	49.19	Auxin-responsive protein IAA21 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA21...	[more]
P0C132	7.6e-65	51.74	Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA30...	[more]

BLAST of Sed0002458 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CTT1	6.8e-149	87.91	Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111014504 PE=3 SV=...	[more]
A0A5D3BFM3	5.7e-148	87.95	Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A0A0LT68	5.7e-148	87.91	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_1G207820 PE=3 SV=1	[more]
A0A1S3CHQ1	3.7e-147	87.62	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103501033 PE=3 SV=1	[more]
A0A6J1JBD0	1.6e-145	85.95	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111485238 PE=3 SV=1	[more]

BLAST of Sed0002458 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29080.1	2.7e-81	57.28	phytochrome-associated protein 2	[more]
AT2G22670.1	1.2e-70	50.48	indoleacetic acid-induced protein 8	[more]
AT2G22670.3	1.2e-70	50.48	indoleacetic acid-induced protein 8	[more]
AT2G22670.4	1.2e-70	50.48	indoleacetic acid-induced protein 8	[more]
AT5G65670.2	1.6e-70	47.52	indole-3-acetic acid inducible 9	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 39..291 e-value: 2.1E-84 score: 283.2
None	No IPR available	GENE3D	3.10.20.90		coord: 175..293 e-value: 1.1E-42 score: 146.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..144
None	No IPR available	PANTHER	PTHR31734:SF150	AUXIN-RESPONSIVE PROTEIN IAA27	coord: 14..292
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 177..281
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 14..292
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 180..282 score: 23.236452

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002458.1	Sed0002458.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding