Sed0002446 (gene) Chayote v1

Overview


Name	Sed0002446
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Germin-like protein
Location	LG10: 339987 .. 340998 (-)
RNA-Seq Expression	Sed0002446
Synteny	Sed0002446

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACACATCAAAACTTTCCAATTCTCATCTTCAAAACCAACATATATAATAAATATATCATTCTCCTTAATTAGTTGCAATTTCTTGGCCATGGCATCCAAAGCTATCATCTTGGGACTCCTCATTGCAACGTGTGTCGTTGCAGTATTCGCATCCGACCCGAGTCCTCTTCAAGATTTTTGTGTCGCCGATCCAAACAGTAATGGTAAACATACAAAATCCTTTTAAGAATTGTTTAATTTTTGATCGAGAATATATGTCTTAACCAGTTACGATTTTGTAGTGAAAGTGAATGGAGCTGTGTGTAAAGATCCCAAAGTTGTGACAGCGGATGATTTTTTCTTTAGTGGACTCAACAAAGTAGGCAACACATCAAATCCTGTCGGATCTCGAGTGAGTGCCGTAAATGTGGTTCAAATCCCTGGACTTAACACTCTCGGCATCTCTTTGGCTCGTGTCGACTACGCTCGGTGGGGCATCAACCCACCCCACACTCACCCGCGAGCCACCGAGGTCCTGACCGTCCTCAAGGGAACCCTCCTCGTCGGTTTCGTCACCTCGAACACCGAGAATCGTCTGTTCACCAAGGTGCTAAACAAGGGGGATGTGTTTGTTTTTCCCGTTGGTTTGGTTCACTTCCAACAGAATATCGGCCATGGACCCGCGGTCGCACTCGCCGCACTGAGCAGCCAGAACCCGGGTGTTATTACCATAGCTAATGCTGTGTTTGGATCGAACCCTGATATCCCAACTGATATTCTTGCAAAGGCTTTCCAAACTGATAAAGCCATTATTGCTGGAATTCAAGCCAAGTTCTAGACTGTTGCTTCAATTTATTTGTGTTTTGAGTTTGGTTCTTTATTTGGTTGGAATGTTTGTTTTTGTTTGTATGAGTCGTAAATTTATTTAATTATCAGTTGTAATTTGAATTGAAATGAATTGGATTGTCTTTATTTAATGCAATATCTTTAATTACTTTTCAGTTGTTTGAACAGATAGTTCATAATGTGTGTG

mRNA sequence

ACACATCAAAACTTTCCAATTCTCATCTTCAAAACCAACATATATAATAAATATATCATTCTCCTTAATTAGTTGCAATTTCTTGGCCATGGCATCCAAAGCTATCATCTTGGGACTCCTCATTGCAACGTGTGTCGTTGCAGTATTCGCATCCGACCCGAGTCCTCTTCAAGATTTTTGTGTCGCCGATCCAAACAGTAATGTGAAAGTGAATGGAGCTGTGTGTAAAGATCCCAAAGTTGTGACAGCGGATGATTTTTTCTTTAGTGGACTCAACAAAGTAGGCAACACATCAAATCCTGTCGGATCTCGAGTGAGTGCCGTAAATGTGGTTCAAATCCCTGGACTTAACACTCTCGGCATCTCTTTGGCTCGTGTCGACTACGCTCGGTGGGGCATCAACCCACCCCACACTCACCCGCGAGCCACCGAGGTCCTGACCGTCCTCAAGGGAACCCTCCTCGTCGGTTTCGTCACCTCGAACACCGAGAATCGTCTGTTCACCAAGGTGCTAAACAAGGGGGATGTGTTTGTTTTTCCCGTTGGTTTGGTTCACTTCCAACAGAATATCGGCCATGGACCCGCGGTCGCACTCGCCGCACTGAGCAGCCAGAACCCGGGTGTTATTACCATAGCTAATGCTGTGTTTGGATCGAACCCTGATATCCCAACTGATATTCTTGCAAAGGCTTTCCAAACTGATAAAGCCATTATTGCTGGAATTCAAGCCAAGTTCTAGACTGTTGCTTCAATTTATTTGTGTTTTGAGTTTGGTTCTTTATTTGGTTGGAATGTTTGTTTTTGTTTGTATGAGTCGTAAATTTATTTAATTATCAGTTGTAATTTGAATTGAAATGAATTGGATTGTCTTTATTTAATGCAATATCTTTAATTACTTTTCAGTTGTTTGAACAGATAGTTCATAATGTGTGTG

Coding sequence (CDS)

ATGGCATCCAAAGCTATCATCTTGGGACTCCTCATTGCAACGTGTGTCGTTGCAGTATTCGCATCCGACCCGAGTCCTCTTCAAGATTTTTGTGTCGCCGATCCAAACAGTAATGTGAAAGTGAATGGAGCTGTGTGTAAAGATCCCAAAGTTGTGACAGCGGATGATTTTTTCTTTAGTGGACTCAACAAAGTAGGCAACACATCAAATCCTGTCGGATCTCGAGTGAGTGCCGTAAATGTGGTTCAAATCCCTGGACTTAACACTCTCGGCATCTCTTTGGCTCGTGTCGACTACGCTCGGTGGGGCATCAACCCACCCCACACTCACCCGCGAGCCACCGAGGTCCTGACCGTCCTCAAGGGAACCCTCCTCGTCGGTTTCGTCACCTCGAACACCGAGAATCGTCTGTTCACCAAGGTGCTAAACAAGGGGGATGTGTTTGTTTTTCCCGTTGGTTTGGTTCACTTCCAACAGAATATCGGCCATGGACCCGCGGTCGCACTCGCCGCACTGAGCAGCCAGAACCCGGGTGTTATTACCATAGCTAATGCTGTGTTTGGATCGAACCCTGATATCCCAACTGATATTCTTGCAAAGGCTTTCCAAACTGATAAAGCCATTATTGCTGGAATTCAAGCCAAGTTCTAG

Protein sequence

MASKAIILGLLIATCVVAVFASDPSPLQDFCVADPNSNVKVNGAVCKDPKVVTADDFFFSGLNKVGNTSNPVGSRVSAVNVVQIPGLNTLGISLARVDYARWGINPPHTHPRATEVLTVLKGTLLVGFVTSNTENRLFTKVLNKGDVFVFPVGLVHFQQNIGHGPAVALAALSSQNPGVITIANAVFGSNPDIPTDILAKAFQTDKAIIAGIQAKF

Homology

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BLAST of Sed0002446 vs. NCBI nr
Match: XP_023543231.1 (putative germin-like protein 2-1 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 395.2 bits (1014), Expect = 3.6e-106
Identity = 200/216 (92.59%), Postives = 206/216 (95.37%), Query Frame = 0


Query: 1   MASKAIILGLLIATCVVAVFASDPSPLQDFCVADPNSNVKVNGAVCKDPKVVTADDFFFS 60
           MASKAIIL LLIATCVVAVFASDPSPLQDFCVADPNS VKVNG VCKDPK VTADDFFFS
Sbjct: 1   MASKAIILELLIATCVVAVFASDPSPLQDFCVADPNSMVKVNGGVCKDPKAVTADDFFFS 60

Query: 61  GLNKVGNTSNPVGSRVSAVNVVQIPGLNTLGISLARVDYARWGINPPHTHPRATEVLTVL 120
           GLNKVGNTSNPVGSRVSAVNVVQIPGLNTLGISLARVDYA  GINPPHTHPRATE+LTVL
Sbjct: 61  GLNKVGNTSNPVGSRVSAVNVVQIPGLNTLGISLARVDYAPRGINPPHTHPRATEILTVL 120

Query: 121 KGTLLVGFVTSNTENRLFTKVLNKGDVFVFPVGLVHFQQNIGHGPAVALAALSSQNPGVI 180
           +GTLLVGFVTSNTENRLFTKVL KGDVFVFP+GL+HFQQNIGHG AVA+AALSSQNPGVI
Sbjct: 121 EGTLLVGFVTSNTENRLFTKVLQKGDVFVFPIGLIHFQQNIGHGHAVAIAALSSQNPGVI 180

Query: 181 TIANAVFGSNPDIPTDILAKAFQTDKAIIAGIQAKF 217
           TIANAVFGSNPDIPTD+LAKAFQT K IIAGIQAKF
Sbjct: 181 TIANAVFGSNPDIPTDVLAKAFQTHKPIIAGIQAKF 216

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BLAST of Sed0002446 vs. NCBI nr
Match: XP_022977483.1 (putative germin-like protein 2-1 isoform X1 [Cucurbita maxima])

HSP 1 Score: 394.0 bits (1011), Expect = 8.1e-106
Identity = 199/216 (92.13%), Postives = 206/216 (95.37%), Query Frame = 0


Query: 1   MASKAIILGLLIATCVVAVFASDPSPLQDFCVADPNSNVKVNGAVCKDPKVVTADDFFFS 60
           MASKAIIL LLIATCVVAVFASDPSPLQDFCVADPNS VKVNG VCKDPK VTADDFFF+
Sbjct: 1   MASKAIILELLIATCVVAVFASDPSPLQDFCVADPNSMVKVNGGVCKDPKAVTADDFFFN 60

Query: 61  GLNKVGNTSNPVGSRVSAVNVVQIPGLNTLGISLARVDYARWGINPPHTHPRATEVLTVL 120
           GLNKVGNTSNPVGSRVSAVNVVQIPGLNTLGISLARVDYA  GINPPHTHPRATE+LTVL
Sbjct: 61  GLNKVGNTSNPVGSRVSAVNVVQIPGLNTLGISLARVDYAPRGINPPHTHPRATEILTVL 120

Query: 121 KGTLLVGFVTSNTENRLFTKVLNKGDVFVFPVGLVHFQQNIGHGPAVALAALSSQNPGVI 180
           +GTLLVGFVTSNTENRLFTKVL KGDVFVFP+GL+HFQQNIGHG AVA+AALSSQNPGVI
Sbjct: 121 EGTLLVGFVTSNTENRLFTKVLQKGDVFVFPIGLIHFQQNIGHGHAVAIAALSSQNPGVI 180

Query: 181 TIANAVFGSNPDIPTDILAKAFQTDKAIIAGIQAKF 217
           TIANAVFGSNPDIPTD+LAKAFQT K IIAGIQAKF
Sbjct: 181 TIANAVFGSNPDIPTDVLAKAFQTHKPIIAGIQAKF 216

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BLAST of Sed0002446 vs. NCBI nr
Match: KAA0052482.1 (putative germin-like protein 2-1 [Cucumis melo var. makuwa] >TYK13340.1 putative germin-like protein 2-1 [Cucumis melo var. makuwa])

HSP 1 Score: 391.0 bits (1003), Expect = 6.8e-105
Identity = 196/216 (90.74%), Postives = 204/216 (94.44%), Query Frame = 0


Query: 1   MASKAIILGLLIATCVVAVFASDPSPLQDFCVADPNSNVKVNGAVCKDPKVVTADDFFFS 60
           MASKAII G LI TCVVAVFASDP+ LQD CVADPN+ VKVNG VCKDPKVVTADDFFFS
Sbjct: 1   MASKAIIFGFLIVTCVVAVFASDPNHLQDLCVADPNNTVKVNGVVCKDPKVVTADDFFFS 60

Query: 61  GLNKVGNTSNPVGSRVSAVNVVQIPGLNTLGISLARVDYARWGINPPHTHPRATEVLTVL 120
           GL+KVGNTSNPVGSRVS VNVVQIPGLNTLGISLARVDYA WGINPPHTHPRATE+L+VL
Sbjct: 61  GLDKVGNTSNPVGSRVSPVNVVQIPGLNTLGISLARVDYAPWGINPPHTHPRATEILSVL 120

Query: 121 KGTLLVGFVTSNTENRLFTKVLNKGDVFVFPVGLVHFQQNIGHGPAVALAALSSQNPGVI 180
           +GTLLVGFVTSNTENRLFTKVL KGDVFVFP+GLVHFQQNIGHGPAVALAALSSQNPGVI
Sbjct: 121 EGTLLVGFVTSNTENRLFTKVLEKGDVFVFPIGLVHFQQNIGHGPAVALAALSSQNPGVI 180

Query: 181 TIANAVFGSNPDIPTDILAKAFQTDKAIIAGIQAKF 217
           TIANAVFGS PDI TDILAKAFQTDK+IIAGIQAKF
Sbjct: 181 TIANAVFGSKPDISTDILAKAFQTDKSIIAGIQAKF 216

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BLAST of Sed0002446 vs. NCBI nr
Match: XP_022925750.1 (putative germin-like protein 2-1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 389.4 bits (999), Expect = 2.0e-104
Identity = 197/216 (91.20%), Postives = 205/216 (94.91%), Query Frame = 0


Query: 1   MASKAIILGLLIATCVVAVFASDPSPLQDFCVADPNSNVKVNGAVCKDPKVVTADDFFFS 60
           MASKAIIL LLIATCVVAVFASDPSPLQDFCVADPNS VKVNG VCKDPK VTADDFFFS
Sbjct: 1   MASKAIILELLIATCVVAVFASDPSPLQDFCVADPNSMVKVNGGVCKDPKAVTADDFFFS 60

Query: 61  GLNKVGNTSNPVGSRVSAVNVVQIPGLNTLGISLARVDYARWGINPPHTHPRATEVLTVL 120
           GL+K GNTSNPVGSRVSAVNVVQIPGLNTLGISLARVDYA  GINPPHTHPRATE+LTVL
Sbjct: 61  GLHKAGNTSNPVGSRVSAVNVVQIPGLNTLGISLARVDYAPRGINPPHTHPRATEILTVL 120

Query: 121 KGTLLVGFVTSNTENRLFTKVLNKGDVFVFPVGLVHFQQNIGHGPAVALAALSSQNPGVI 180
           +GTLLVGFVTSNTENRLFTKVL KGDVFVFP+GL+HFQQNIG+G AVA+AALSSQNPGVI
Sbjct: 121 EGTLLVGFVTSNTENRLFTKVLQKGDVFVFPIGLIHFQQNIGYGHAVAIAALSSQNPGVI 180

Query: 181 TIANAVFGSNPDIPTDILAKAFQTDKAIIAGIQAKF 217
           TIANAVFGSNPDIPTD+LAKAFQT K IIAGIQAKF
Sbjct: 181 TIANAVFGSNPDIPTDVLAKAFQTHKPIIAGIQAKF 216

[Close]

BLAST of Sed0002446 vs. NCBI nr
Match: KAG6581480.1 (putative germin-like protein 2-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 389.0 bits (998), Expect = 2.6e-104
Identity = 197/216 (91.20%), Postives = 204/216 (94.44%), Query Frame = 0


Query: 1   MASKAIILGLLIATCVVAVFASDPSPLQDFCVADPNSNVKVNGAVCKDPKVVTADDFFFS 60
           MASKAIIL LLIATCVVAV ASDPSPLQDFCVADPNS VKVNG VCKDPK VTADDFFFS
Sbjct: 1   MASKAIILELLIATCVVAVLASDPSPLQDFCVADPNSMVKVNGGVCKDPKAVTADDFFFS 60

Query: 61  GLNKVGNTSNPVGSRVSAVNVVQIPGLNTLGISLARVDYARWGINPPHTHPRATEVLTVL 120
           GL+K GNTSNPVGSRVSAVNVVQIPGLNTLGISLARVDYA  GINPPHTHPRATE+LTVL
Sbjct: 61  GLHKAGNTSNPVGSRVSAVNVVQIPGLNTLGISLARVDYAPRGINPPHTHPRATEILTVL 120

Query: 121 KGTLLVGFVTSNTENRLFTKVLNKGDVFVFPVGLVHFQQNIGHGPAVALAALSSQNPGVI 180
           +GTLLVGFVTSNTENRLFTKVL KGDVFVFP+GL+HFQQNIGHG AVA+AALSSQNPGVI
Sbjct: 121 EGTLLVGFVTSNTENRLFTKVLQKGDVFVFPIGLIHFQQNIGHGHAVAVAALSSQNPGVI 180

Query: 181 TIANAVFGSNPDIPTDILAKAFQTDKAIIAGIQAKF 217
           TIANAVFGSNPDIPTD+LAKAFQT K IIAGIQAKF
Sbjct: 181 TIANAVFGSNPDIPTDVLAKAFQTHKPIIAGIQAKF 216

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BLAST of Sed0002446 vs. ExPASy Swiss-Prot
Match: Q6K5Q0 (Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0491600 PE=3 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 9.7e-78
Identity = 150/216 (69.44%), Postives = 168/216 (77.78%), Query Frame = 0


Query: 1   MASKAIILGLLIATCVVAVFASDPSPLQDFCVADPNSNVKVNGAVCKDPKVVTADDFFFS 60
           MAS    L  L+A  +   FASDPS LQDFCVAD  S V VNG  CKDP  +T +DFFFS
Sbjct: 1   MASTWFFLLALLAVSISNAFASDPSQLQDFCVADKMSQVLVNGFACKDPAAITVEDFFFS 60

Query: 61  GLNKVGNTSNPVGSRVSAVNVVQIPGLNTLGISLARVDYARWGINPPHTHPRATEVLTVL 120
           GL+  GNTSN  GS V+ VNV QI GLNTLGISLARVDYA +G+NPPH HPRATE+LT+L
Sbjct: 61  GLHMAGNTSNRQGSAVTGVNVAQISGLNTLGISLARVDYAPYGLNPPHIHPRATEILTIL 120

Query: 121 KGTLLVGFVTSNTENRLFTKVLNKGDVFVFPVGLVHFQQNIGHGPAVALAALSSQNPGVI 180
           +G+L VGFVTSN EN+LFTKVLNKGDVFVFP GL+HFQ N G    +ALAALSSQNPGVI
Sbjct: 121 EGSLYVGFVTSNPENKLFTKVLNKGDVFVFPQGLIHFQFNYGTKDVIALAALSSQNPGVI 180

Query: 181 TIANAVFGSNPDIPTDILAKAFQTDKAIIAGIQAKF 217
           TIANAVFGS P I  DILAKAFQ +K I+  IQA+F
Sbjct: 181 TIANAVFGSKPFISDDILAKAFQVEKKIVDRIQAQF 216

[Close]

BLAST of Sed0002446 vs. ExPASy Swiss-Prot
Match: Q6K5P8 (Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0491800 PE=3 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 8.2e-77
Identity = 143/198 (72.22%), Postives = 162/198 (81.82%), Query Frame = 0


Query: 19  VFASDPSPLQDFCVADPNSNVKVNGAVCKDPKVVTADDFFFSGLNKVGNTSNPVGSRVSA 78
           V ASDPS LQD CVAD  S V+VNG  CKD + V A+DFFFSGL+  GNT+N  GS V+A
Sbjct: 26  VVASDPSHLQDLCVADKASTVRVNGVACKDGEDVAAEDFFFSGLHMAGNTTNKQGSAVTA 85

Query: 79  VNVVQIPGLNTLGISLARVDYARWGINPPHTHPRATEVLTVLKGTLLVGFVTSNTENRLF 138
           VNV Q+PGLNTLGISLAR+DYA  G+NPPHTHPRATE+LTVL+G+L VGFVTSN EN+LF
Sbjct: 86  VNVAQVPGLNTLGISLARIDYALHGLNPPHTHPRATEILTVLEGSLYVGFVTSNPENKLF 145

Query: 139 TKVLNKGDVFVFPVGLVHFQQNIGHGPAVALAALSSQNPGVITIANAVFGSNPDIPTDIL 198
           TKV+NKGDVFVFP GLVHFQ N G   AVA+ ALSSQNPGVIT+ANAVFGS P I  DIL
Sbjct: 146 TKVINKGDVFVFPKGLVHFQFNYGTTDAVAIVALSSQNPGVITVANAVFGSKPSITDDIL 205

Query: 199 AKAFQTDKAIIAGIQAKF 217
           AKAFQ +K ++  IQAKF
Sbjct: 206 AKAFQVEKTVVDQIQAKF 223

[Close]

BLAST of Sed0002446 vs. ExPASy Swiss-Prot
Match: Q6K5P9 (Putative germin-like protein 2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0491700 PE=3 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 2.9e-74
Identity = 144/210 (68.57%), Postives = 160/210 (76.19%), Query Frame = 0


Query: 7   ILGLLIATCVVAVFASDPSPLQDFCVADPNSNVKVNGAVCKDPKVVTADDFFFSGLNKVG 66
           ++ LL   C     ASDP  LQDFCV D  S V+VNG  CKD K V A DFFFSGL+  G
Sbjct: 14  VVALLALWCSHGAIASDPGLLQDFCVVDKMSQVRVNGFPCKDAKDVVAGDFFFSGLHMAG 73

Query: 67  NTSNPVGSRVSAVNVVQIPGLNTLGISLARVDYARWGINPPHTHPRATEVLTVLKGTLLV 126
           NT+N  GS V+ VNV QIPGLNT+G+SL R+DYA  G+NPPHTHPRATE+ TVL+G+L V
Sbjct: 74  NTTNKQGSNVTTVNVAQIPGLNTMGVSLVRIDYAPNGLNPPHTHPRATEIPTVLEGSLYV 133

Query: 127 GFVTSNTENRLFTKVLNKGDVFVFPVGLVHFQQNIGHGPAVALAALSSQNPGVITIANAV 186
           GFV SN EN+LFTKVLNKGDVFVFP GLVHFQ N G   AVALAALSSQNPGVIT+ NAV
Sbjct: 134 GFVISNPENKLFTKVLNKGDVFVFPQGLVHFQFNNGTNNAVALAALSSQNPGVITVGNAV 193

Query: 187 FGSNPDIPTDILAKAFQTDKAIIAGIQAKF 217
           FGS P I  DILAKAFQ DK II  IQA+F
Sbjct: 194 FGSKPSISDDILAKAFQVDKNIIDRIQAQF 223

[Close]

BLAST of Sed0002446 vs. ExPASy Swiss-Prot
Match: Q6YZA9 (Germin-like protein 8-2 OS=Oryza sativa subsp. japonica OX=39947 GN=GER3 PE=2 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.2e-72
Identity = 143/213 (67.14%), Postives = 169/213 (79.34%), Query Frame = 0


Query: 6   IILGLLIATCVVAVFASDPSPLQDFCVADPNSNVKVNGAVCKDPKVVTADDFFFSG-LNK 65
           +++  L+        ASDPSPLQDFCVAD NS V+VNG VCK+P   +ADDFF +  L+K
Sbjct: 9   LLVAALLGLASWKAIASDPSPLQDFCVADLNSPVRVNGFVCKNPMNASADDFFKAAMLDK 68

Query: 66  VGNTSNPVGSRVSAVNVVQIPGLNTLGISLARVDYARWGINPPHTHPRATEVLTVLKGTL 125
             +T+N VGS V+ VNV+Q+PGLNTLGIS+AR+D+A  G+NPPHTHPRATE+ TVL+GTL
Sbjct: 69  PRDTNNKVGSNVTLVNVLQLPGLNTLGISIARLDFAPLGLNPPHTHPRATEIFTVLEGTL 128

Query: 126 LVGFVTSNTENRLFTKVLNKGDVFVFPVGLVHFQQNIG-HGPAVALAALSSQNPGVITIA 185
            VGFVTSN +NRL +KVLNKGDVFVFP GL+HFQ N   H PAVA+AALSSQNPGVITIA
Sbjct: 129 YVGFVTSNPDNRLLSKVLNKGDVFVFPEGLIHFQFNPNPHKPAVAIAALSSQNPGVITIA 188

Query: 186 NAVFGSNPDIPTDILAKAFQTDKAIIAGIQAKF 217
           NAVFGSNP I  DIL KAFQ DK II  +QA+F
Sbjct: 189 NAVFGSNPPISDDILMKAFQVDKKIIDLLQAQF 221

[Close]

BLAST of Sed0002446 vs. ExPASy Swiss-Prot
Match: Q6YZZ2 (Germin-like protein 8-7 OS=Oryza sativa subsp. japonica OX=39947 GN=GER6 PE=2 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 3.0e-71
Identity = 142/215 (66.05%), Postives = 161/215 (74.88%), Query Frame = 0


Query: 3   SKAIILGLLIATCVVAVFASDPSPLQDFCVADPNSNVKVNGAVCKDPKVVTADDFFFSGL 62
           S   +L +L+A       ASDPSPLQDFCVAD +S V VNG  C DPK V AD FF + +
Sbjct: 5   SSFCLLAVLLALVSWQAIASDPSPLQDFCVADKHSPVLVNGFACLDPKYVNADHFFKAAM 64

Query: 63  NKVGNTSNPVGSRVSAVNVVQIPGLNTLGISLARVDYARWGINPPHTHPRATEVLTVLKG 122
                 +N VGS V+ +NV+QIPGLNTLGIS+AR+DYA  G NPPHTHPRATE+LTVL+G
Sbjct: 65  LDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEG 124

Query: 123 TLLVGFVTSNTENRLFTKVLNKGDVFVFPVGLVHFQQNIG-HGPAVALAALSSQNPGVIT 182
           TL VGFVTSN  N LF+KVLNKGDVFVFP GL+HFQ N   H PAVALAALSSQNPG IT
Sbjct: 125 TLYVGFVTSNPNNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVALAALSSQNPGAIT 184

Query: 183 IANAVFGSNPDIPTDILAKAFQTDKAIIAGIQAKF 217
           IANAVFGS P I  DILAKAFQ +K  I  +QA+F
Sbjct: 185 IANAVFGSKPPISDDILAKAFQVEKGTIDWLQAQF 219

[Close]

BLAST of Sed0002446 vs. ExPASy TrEMBL
Match: A0A6J1IQ43 (Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111477813 PE=3 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 3.9e-106
Identity = 199/216 (92.13%), Postives = 206/216 (95.37%), Query Frame = 0


Query: 1   MASKAIILGLLIATCVVAVFASDPSPLQDFCVADPNSNVKVNGAVCKDPKVVTADDFFFS 60
           MASKAIIL LLIATCVVAVFASDPSPLQDFCVADPNS VKVNG VCKDPK VTADDFFF+
Sbjct: 1   MASKAIILELLIATCVVAVFASDPSPLQDFCVADPNSMVKVNGGVCKDPKAVTADDFFFN 60

Query: 61  GLNKVGNTSNPVGSRVSAVNVVQIPGLNTLGISLARVDYARWGINPPHTHPRATEVLTVL 120
           GLNKVGNTSNPVGSRVSAVNVVQIPGLNTLGISLARVDYA  GINPPHTHPRATE+LTVL
Sbjct: 61  GLNKVGNTSNPVGSRVSAVNVVQIPGLNTLGISLARVDYAPRGINPPHTHPRATEILTVL 120

Query: 121 KGTLLVGFVTSNTENRLFTKVLNKGDVFVFPVGLVHFQQNIGHGPAVALAALSSQNPGVI 180
           +GTLLVGFVTSNTENRLFTKVL KGDVFVFP+GL+HFQQNIGHG AVA+AALSSQNPGVI
Sbjct: 121 EGTLLVGFVTSNTENRLFTKVLQKGDVFVFPIGLIHFQQNIGHGHAVAIAALSSQNPGVI 180

Query: 181 TIANAVFGSNPDIPTDILAKAFQTDKAIIAGIQAKF 217
           TIANAVFGSNPDIPTD+LAKAFQT K IIAGIQAKF
Sbjct: 181 TIANAVFGSNPDIPTDVLAKAFQTHKPIIAGIQAKF 216

[Close]

BLAST of Sed0002446 vs. ExPASy TrEMBL
Match: A0A5D3CPI3 (Germin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009650 PE=3 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 3.3e-105
Identity = 196/216 (90.74%), Postives = 204/216 (94.44%), Query Frame = 0


Query: 1   MASKAIILGLLIATCVVAVFASDPSPLQDFCVADPNSNVKVNGAVCKDPKVVTADDFFFS 60
           MASKAII G LI TCVVAVFASDP+ LQD CVADPN+ VKVNG VCKDPKVVTADDFFFS
Sbjct: 1   MASKAIIFGFLIVTCVVAVFASDPNHLQDLCVADPNNTVKVNGVVCKDPKVVTADDFFFS 60

Query: 61  GLNKVGNTSNPVGSRVSAVNVVQIPGLNTLGISLARVDYARWGINPPHTHPRATEVLTVL 120
           GL+KVGNTSNPVGSRVS VNVVQIPGLNTLGISLARVDYA WGINPPHTHPRATE+L+VL
Sbjct: 61  GLDKVGNTSNPVGSRVSPVNVVQIPGLNTLGISLARVDYAPWGINPPHTHPRATEILSVL 120

Query: 121 KGTLLVGFVTSNTENRLFTKVLNKGDVFVFPVGLVHFQQNIGHGPAVALAALSSQNPGVI 180
           +GTLLVGFVTSNTENRLFTKVL KGDVFVFP+GLVHFQQNIGHGPAVALAALSSQNPGVI
Sbjct: 121 EGTLLVGFVTSNTENRLFTKVLEKGDVFVFPIGLVHFQQNIGHGPAVALAALSSQNPGVI 180

Query: 181 TIANAVFGSNPDIPTDILAKAFQTDKAIIAGIQAKF 217
           TIANAVFGS PDI TDILAKAFQTDK+IIAGIQAKF
Sbjct: 181 TIANAVFGSKPDISTDILAKAFQTDKSIIAGIQAKF 216

[Close]

BLAST of Sed0002446 vs. ExPASy TrEMBL
Match: A0A6J1EJ34 (Germin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111433067 PE=3 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 9.6e-105
Identity = 197/216 (91.20%), Postives = 205/216 (94.91%), Query Frame = 0


Query: 1   MASKAIILGLLIATCVVAVFASDPSPLQDFCVADPNSNVKVNGAVCKDPKVVTADDFFFS 60
           MASKAIIL LLIATCVVAVFASDPSPLQDFCVADPNS VKVNG VCKDPK VTADDFFFS
Sbjct: 1   MASKAIILELLIATCVVAVFASDPSPLQDFCVADPNSMVKVNGGVCKDPKAVTADDFFFS 60

Query: 61  GLNKVGNTSNPVGSRVSAVNVVQIPGLNTLGISLARVDYARWGINPPHTHPRATEVLTVL 120
           GL+K GNTSNPVGSRVSAVNVVQIPGLNTLGISLARVDYA  GINPPHTHPRATE+LTVL
Sbjct: 61  GLHKAGNTSNPVGSRVSAVNVVQIPGLNTLGISLARVDYAPRGINPPHTHPRATEILTVL 120

Query: 121 KGTLLVGFVTSNTENRLFTKVLNKGDVFVFPVGLVHFQQNIGHGPAVALAALSSQNPGVI 180
           +GTLLVGFVTSNTENRLFTKVL KGDVFVFP+GL+HFQQNIG+G AVA+AALSSQNPGVI
Sbjct: 121 EGTLLVGFVTSNTENRLFTKVLQKGDVFVFPIGLIHFQQNIGYGHAVAIAALSSQNPGVI 180

Query: 181 TIANAVFGSNPDIPTDILAKAFQTDKAIIAGIQAKF 217
           TIANAVFGSNPDIPTD+LAKAFQT K IIAGIQAKF
Sbjct: 181 TIANAVFGSNPDIPTDVLAKAFQTHKPIIAGIQAKF 216

[Close]

BLAST of Sed0002446 vs. ExPASy TrEMBL
Match: A0A6J1D052 (Germin-like protein OS=Momordica charantia OX=3673 GN=LOC111015796 PE=3 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 4.5e-102
Identity = 190/211 (90.05%), Postives = 200/211 (94.79%), Query Frame = 0


Query: 6   IILGLLIATCVVAVFASDPSPLQDFCVADPNSNVKVNGAVCKDPKVVTADDFFFSGLNKV 65
           I+LGL+IATC VA FASDPSPLQDFCVADPNS VKVNG VCKDPKVVTADDFF  GL+K 
Sbjct: 8   ILLGLVIATCAVAAFASDPSPLQDFCVADPNSAVKVNGFVCKDPKVVTADDFFAKGLDKA 67

Query: 66  GNTSNPVGSRVSAVNVVQIPGLNTLGISLARVDYARWGINPPHTHPRATEVLTVLKGTLL 125
           GNTSNP GS+V+AVNV+QIPGLNTLGISLARVDYA WGINPPHTHPRATE+LTVL+GTLL
Sbjct: 68  GNTSNPNGSKVTAVNVMQIPGLNTLGISLARVDYAPWGINPPHTHPRATEILTVLEGTLL 127

Query: 126 VGFVTSNTENRLFTKVLNKGDVFVFPVGLVHFQQNIGHGPAVALAALSSQNPGVITIANA 185
           VGFVTSNTENRLFTKVL KGDVFVFPVGL+HFQQNIG+GPAVALAALSSQNPGVITIANA
Sbjct: 128 VGFVTSNTENRLFTKVLYKGDVFVFPVGLIHFQQNIGYGPAVALAALSSQNPGVITIANA 187

Query: 186 VFGSNPDIPTDILAKAFQTDKAIIAGIQAKF 217
           VFGSNPDI TDILAKAFQTDKAIIAGIQAKF
Sbjct: 188 VFGSNPDISTDILAKAFQTDKAIIAGIQAKF 218

[Close]

BLAST of Sed0002446 vs. ExPASy TrEMBL
Match: A0A0A0KIA8 (Germin-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G525550 PE=3 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 5.1e-98
Identity = 186/216 (86.11%), Postives = 197/216 (91.20%), Query Frame = 0


Query: 1   MASKAIILGLLIATCVVAVFASDPSPLQDFCVADPNSNVKVNGAVCKDPKVVTADDFFFS 60
           MASKAII G LI T  VAVFASDPS LQDFCVADP + VKVNG VCK+ +VVTADDFFFS
Sbjct: 1   MASKAIIFGFLIVTYAVAVFASDPSHLQDFCVADPTNTVKVNGVVCKESEVVTADDFFFS 60

Query: 61  GLNKVGNTSNPVGSRVSAVNVVQIPGLNTLGISLARVDYARWGINPPHTHPRATEVLTVL 120
           GL+KVGNTSNPVGS+V+ VNVVQIPGLNTLGISLAR+DYA  GINPPHTHPRATE+LTVL
Sbjct: 61  GLHKVGNTSNPVGSKVTPVNVVQIPGLNTLGISLARIDYAPLGINPPHTHPRATEILTVL 120

Query: 121 KGTLLVGFVTSNTENRLFTKVLNKGDVFVFPVGLVHFQQNIGHGPAVALAALSSQNPGVI 180
           +GTL VGFVTSNTENRLFTKVL KGDVFVFPVGLVHFQ NIGHGPAVALAALSSQNPGVI
Sbjct: 121 EGTLHVGFVTSNTENRLFTKVLQKGDVFVFPVGLVHFQHNIGHGPAVALAALSSQNPGVI 180

Query: 181 TIANAVFGSNPDIPTDILAKAFQTDKAIIAGIQAKF 217
           TI NAVFGS PDI TDIL+KAFQTDK+IIAGIQAKF
Sbjct: 181 TIGNAVFGSKPDISTDILSKAFQTDKSIIAGIQAKF 216

[Close]

BLAST of Sed0002446 vs. TAIR 10
Match: AT5G38940.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 267.7 bits (683), Expect = 8.1e-72
Identity = 145/222 (65.32%), Postives = 168/222 (75.68%), Query Frame = 0


Query: 1   MASKAI----ILGLLIATCVVAVFASDPSPLQDFCVADPNS--NVKVNGAVCKDPKVVTA 60
           MA K++    +L LL  T  +A+ ASDPS LQDFCV+   S   V VNG  CKDPK+VTA
Sbjct: 1   MAMKSLSFLAVLSLLALTLPLAI-ASDPSQLQDFCVSANTSANGVFVNGKFCKDPKLVTA 60

Query: 61  DDFFFSGLNKVGNTSNPVGSRVSAVNVVQIPGLNTLGISLARVDYARWGINPPHTHPRAT 120
           DDFFFSGL      ++PVGS V+AVNV  + GLNTLGISL R+DYA  G NPPHTHPRAT
Sbjct: 61  DDFFFSGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVNGQNPPHTHPRAT 120

Query: 121 EVLTVLKGTLLVGFVTSNTENRLFTKVLNKGDVFVFPVGLVHFQQNIGHGPAVALAALSS 180
           E+L V +GTLLVGFVTSN +NRLF+KVLN+GDVFVFP GL+HFQ NIG  PAVA AALSS
Sbjct: 121 EILVVEQGTLLVGFVTSNPDNRLFSKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSS 180

Query: 181 QNPGVITIANAVFGSNPDIPTDILAKAFQTDKAIIAGIQAKF 217
           QNPGVITIAN VFG+NP I   ILAKAFQ +  ++  +Q KF
Sbjct: 181 QNPGVITIANTVFGANPAINPTILAKAFQLNPRVVMDLQTKF 221

[Close]

BLAST of Sed0002446 vs. TAIR 10
Match: AT5G38930.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 265.8 bits (678), Expect = 3.1e-71
Identity = 139/208 (66.83%), Postives = 158/208 (75.96%), Query Frame = 0


Query: 11  LIATCVVAVFASDPSPLQDFCVADPNS--NVKVNGAVCKDPKVVTADDFFFSGLNKVGNT 70
           L+A  +    ASDPS LQDFCV+  +S   V VNG  CKDPK+VTADDFFF GL      
Sbjct: 14  LLALTLPLTIASDPSQLQDFCVSANSSANGVFVNGKFCKDPKLVTADDFFFPGLQTARPI 73

Query: 71  SNPVGSRVSAVNVVQIPGLNTLGISLARVDYARWGINPPHTHPRATEVLTVLKGTLLVGF 130
           ++PVGS V+AVNV  + GLNTLGISL R+DYA  G NPPHTHPRATE+L V  GTLLVGF
Sbjct: 74  TSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVDGQNPPHTHPRATEILVVELGTLLVGF 133

Query: 131 VTSNTENRLFTKVLNKGDVFVFPVGLVHFQQNIGHGPAVALAALSSQNPGVITIANAVFG 190
           VTSN +NRLFTKVLN+GDVFVFP GL+HFQ NIG  PAVA AALSSQNPGVITIA  VFG
Sbjct: 134 VTSNPDNRLFTKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVITIAPTVFG 193

Query: 191 SNPDIPTDILAKAFQTDKAIIAGIQAKF 217
           +NP I  +ILAKAFQ D  ++  +Q KF
Sbjct: 194 ANPAINPNILAKAFQVDPRVVMDLQTKF 221

[Close]

BLAST of Sed0002446 vs. TAIR 10
Match: AT5G39110.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 265.8 bits (678), Expect = 3.1e-71
Identity = 138/217 (63.59%), Postives = 165/217 (76.04%), Query Frame = 0


Query: 3   SKAIILGLLIATCVVAVFASDPSPLQDFCVA--DPNSNVKVNGAVCKDPKVVTADDFFFS 62
           SK++IL  L A  +    A+DPSPLQDFCVA  D  + V VNG  CKDPK   A+DFF+S
Sbjct: 4   SKSLILITLSALVISFAEANDPSPLQDFCVAIGDLKNGVFVNGKFCKDPKQAKAEDFFYS 63

Query: 63  GLNKVGNTSNPVGSRVSAVNVVQIPGLNTLGISLARVDYARWGINPPHTHPRATEVLTVL 122
           GLN+ G T+N V S V+ VNV QIPGLNTLGISL R+DYA +G NPPHTHPRATE+L ++
Sbjct: 64  GLNQAGTTNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLV 123

Query: 123 KGTLLVGFVTSNTE-NRLFTKVLNKGDVFVFPVGLVHFQQNIGHGPAVALAALSSQNPGV 182
           +GTL VGFV+SN + NRLF KVLN GDVFVFP+G++HFQ NIG  PAVA A LSSQN GV
Sbjct: 124 EGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGV 183

Query: 183 ITIANAVFGSNPDIPTDILAKAFQTDKAIIAGIQAKF 217
           ITIA+ VFGS P I  DILA+AFQ D  ++  ++AKF
Sbjct: 184 ITIADTVFGSTPPINPDILAQAFQLDVNVVKDLEAKF 220

[Close]

BLAST of Sed0002446 vs. TAIR 10
Match: AT4G14630.1 (germin-like protein 9 )

HSP 1 Score: 263.1 bits (671), Expect = 2.0e-70
Identity = 134/209 (64.11%), Postives = 158/209 (75.60%), Query Frame = 0


Query: 11  LIATCVVAVFASDPSPLQDFCVA--DPNSNVKVNGAVCKDPKVVTADDFFFSGLNKVGNT 70
           L A  +  V ASDPSPLQDFCV    P   V VNG  CKDP++V ADDFFFS LN+ GNT
Sbjct: 14  LFALTLPLVIASDPSPLQDFCVGVNTPADGVFVNGKFCKDPRIVFADDFFFSSLNRPGNT 73

Query: 71  SNPVGSRVSAVNVVQIPGLNTLGISLARVDYARWGINPPHTHPRATEVLTVLKGTLLVGF 130
           +N VGS V+ VNV  + GLNTLGISL R+DYA  G NPPHTHPRATE+L V +GTLLVGF
Sbjct: 74  NNAVGSNVTTVNVNNLGGLNTLGISLVRIDYAPNGQNPPHTHPRATEILVVQQGTLLVGF 133

Query: 131 VTSNTE-NRLFTKVLNKGDVFVFPVGLVHFQQNIGHGPAVALAALSSQNPGVITIANAVF 190
           ++SN + NRLF K LN GDVFVFP GL+HFQ N+G  PAVA+AALSSQN GVITIAN +F
Sbjct: 134 ISSNQDGNRLFAKTLNVGDVFVFPEGLIHFQFNLGGTPAVAIAALSSQNAGVITIANTIF 193

Query: 191 GSNPDIPTDILAKAFQTDKAIIAGIQAKF 217
           GS PD+  ++LA+AFQ D   +  +QA+F
Sbjct: 194 GSKPDVDPNVLARAFQMDVNAVRNLQARF 222

[Close]

BLAST of Sed0002446 vs. TAIR 10
Match: AT5G39160.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 263.1 bits (671), Expect = 2.0e-70
Identity = 136/216 (62.96%), Postives = 165/216 (76.39%), Query Frame = 0


Query: 3   SKAIILGLLIATCVVAVFASDPSPLQDFCVA-DPNSNVKVNGAVCKDPKVVTADDFFFSG 62
           S++++   +IA  +  V A DPSPLQDFCVA D    V VNG  CKDPK V A DFFFSG
Sbjct: 4   SQSLVPFAIIALVLSFVNAYDPSPLQDFCVAIDDLKGVFVNGRFCKDPKRVDAKDFFFSG 63

Query: 63  LNKVGNTSNPVGSRVSAVNVVQIPGLNTLGISLARVDYARWGINPPHTHPRATEVLTVLK 122
           LN  GNT+N VGS V+ VNV QIPGLNT+GISL R+DYA  G NPPHTHPR +E+L +++
Sbjct: 64  LNMPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVE 123

Query: 123 GTLLVGFVTSNTE-NRLFTKVLNKGDVFVFPVGLVHFQQNIGHGPAVALAALSSQNPGVI 182
           GTL VGFV+SN + NRLF KVL+ GDVFVFP+G++HFQ N+G  PAVA A LSSQN GVI
Sbjct: 124 GTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVI 183

Query: 183 TIANAVFGSNPDIPTDILAKAFQTDKAIIAGIQAKF 217
           TIAN VFGSNP I  ++LA+AFQ D +++  +QAKF
Sbjct: 184 TIANTVFGSNPPIYPELLARAFQLDASVVKELQAKF 219

The following BLAST results are available for this feature:

BLAST of Sed0002446 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023543231.1	3.6e-106	92.59	putative germin-like protein 2-1 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022977483.1	8.1e-106	92.13	putative germin-like protein 2-1 isoform X1 [Cucurbita maxima]	[more]
KAA0052482.1	6.8e-105	90.74	putative germin-like protein 2-1 [Cucumis melo var. makuwa] >TYK13340.1 putative...	[more]
XP_022925750.1	2.0e-104	91.20	putative germin-like protein 2-1 isoform X1 [Cucurbita moschata]	[more]
KAG6581480.1	2.6e-104	91.20	putative germin-like protein 2-1, partial [Cucurbita argyrosperma subsp. sororia...	[more]

BLAST of Sed0002446 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6K5Q0	9.7e-78	69.44	Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os0...	[more]
Q6K5P8	8.2e-77	72.22	Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os0...	[more]
Q6K5P9	2.9e-74	68.57	Putative germin-like protein 2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os0...	[more]
Q6YZA9	1.2e-72	67.14	Germin-like protein 8-2 OS=Oryza sativa subsp. japonica OX=39947 GN=GER3 PE=2 SV...	[more]
Q6YZZ2	3.0e-71	66.05	Germin-like protein 8-7 OS=Oryza sativa subsp. japonica OX=39947 GN=GER6 PE=2 SV...	[more]

BLAST of Sed0002446 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IQ43	3.9e-106	92.13	Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111477813 PE=3 SV=1	[more]
A0A5D3CPI3	3.3e-105	90.74	Germin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G...	[more]
A0A6J1EJ34	9.6e-105	91.20	Germin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111433067 PE=3 SV=1	[more]
A0A6J1D052	4.5e-102	90.05	Germin-like protein OS=Momordica charantia OX=3673 GN=LOC111015796 PE=3 SV=1	[more]
A0A0A0KIA8	5.1e-98	86.11	Germin-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G525550 PE=3 SV=1	[more]

BLAST of Sed0002446 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38940.1	8.1e-72	65.32	RmlC-like cupins superfamily protein	[more]
AT5G38930.1	3.1e-71	66.83	RmlC-like cupins superfamily protein	[more]
AT5G39110.1	3.1e-71	63.59	RmlC-like cupins superfamily protein	[more]
AT4G14630.1	2.0e-70	64.11	germin-like protein 9	[more]
AT5G39160.1	2.0e-70	62.96	RmlC-like cupins superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001929	Germin	PRINTS	PR00325	GERMIN	coord: 140..160 score: 63.34 coord: 108..128 score: 66.78 coord: 173..188 score: 50.58
IPR006045	Cupin 1	SMART	SM00835	Cupin_1_3	coord: 60..210 e-value: 7.2E-35 score: 131.8
IPR006045	Cupin 1	PFAM	PF00190	Cupin_1	coord: 61..206 e-value: 1.4E-48 score: 164.3
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 22..216 e-value: 6.8E-93 score: 311.6
None	No IPR available	PANTHER	PTHR31238	GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3	coord: 1..216
None	No IPR available	PANTHER	PTHR31238:SF225	GERMIN-LIKE PROTEIN	coord: 1..216
None	No IPR available	CDD	cd02241	cupin_OxOx	coord: 23..216 e-value: 2.43241E-96 score: 276.784
IPR019780	Germin, manganese binding site	PROSITE	PS00725	GERMIN	coord: 103..116
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	51182	RmlC-like cupins	coord: 53..215

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002446.1	Sed0002446.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0048046	apoplast
molecular_function	GO:0030145	manganese ion binding