Sed0002400 (gene) Chayote v1

Overview


Name	Sed0002400
Type	gene
Organism	Sechium edule (Chayote v1)
Description	auxin-responsive protein SAUR50-like
Location	LG05: 39405874 .. 39406426 (-)
RNA-Seq Expression	Sed0002400
Synteny	Sed0002400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATGGCTAAGCTCGTACCCTATGCCAAGAAGAGCAATGGCATTGTAAAGCTCAAGACCGCTGTTGGCAAGCTGCAAAGAAGCCTCTCCTTAGGTCGAAGGTCGAATACAAGTCAAGACGAGTTCGGTTACGAGGTCGGGGATAGCGACTCGACTCCGGTACCGGAGGACGTCAAGGAAGGTCACTTTGCGGTGGTGGCGGTCAACGCTGAGGAGCCAAAACGATTTGTCGTTCCGTTGAGTTGTTTGACGAATCCGACGTTTATAAGGCTTCTAGACGCTGCGGCGGAGGAGTATGGATTTGATCACGAGGGTGCGCTGACCGTCCCGTGTCGGCCGAGCGAGCTCGAGCGGATCGTGGCAGAGGAGTGGGAGGAGGAGGAGGAGAATGGCTGCATTTGGGGATAGTGATTTGGAGAAACCATAACGTGGGGTTTTTGAAAGCTATTGAAACGACCAAGAGGATCTAAAGGTTGTTTTTTTCGTAGCTTCAAACTCTTCATGGCTTTGTAAAACTTTTTACCAATGGAAAATTTGGTATTTTGAAAATGGC

mRNA sequence

CAAATGGCTAAGCTCGTACCCTATGCCAAGAAGAGCAATGGCATTGTAAAGCTCAAGACCGCTGTTGGCAAGCTGCAAAGAAGCCTCTCCTTAGGTCGAAGGTCGAATACAAGTCAAGACGAGTTCGGTTACGAGGTCGGGGATAGCGACTCGACTCCGGTACCGGAGGACGTCAAGGAAGGTCACTTTGCGGTGGTGGCGGTCAACGCTGAGGAGCCAAAACGATTTGTCGTTCCGTTGAGTTGTTTGACGAATCCGACGTTTATAAGGCTTCTAGACGCTGCGGCGGAGGAGTATGGATTTGATCACGAGGGTGCGCTGACCGTCCCGTGTCGGCCGAGCGAGCTCGAGCGGATCGTGGCAGAGGAGTGGGAGGAGGAGGAGGAGAATGGCTGCATTTGGGGATAGTGATTTGGAGAAACCATAACGTGGGGTTTTTGAAAGCTATTGAAACGACCAAGAGGATCTAAAGGTTGTTTTTTTCGTAGCTTCAAACTCTTCATGGCTTTGTAAAACTTTTTACCAATGGAAAATTTGGTATTTTGAAAATGGC

Coding sequence (CDS)

ATGGCTAAGCTCGTACCCTATGCCAAGAAGAGCAATGGCATTGTAAAGCTCAAGACCGCTGTTGGCAAGCTGCAAAGAAGCCTCTCCTTAGGTCGAAGGTCGAATACAAGTCAAGACGAGTTCGGTTACGAGGTCGGGGATAGCGACTCGACTCCGGTACCGGAGGACGTCAAGGAAGGTCACTTTGCGGTGGTGGCGGTCAACGCTGAGGAGCCAAAACGATTTGTCGTTCCGTTGAGTTGTTTGACGAATCCGACGTTTATAAGGCTTCTAGACGCTGCGGCGGAGGAGTATGGATTTGATCACGAGGGTGCGCTGACCGTCCCGTGTCGGCCGAGCGAGCTCGAGCGGATCGTGGCAGAGGAGTGGGAGGAGGAGGAGGAGAATGGCTGCATTTGGGGATAG

Protein sequence

MAKLVPYAKKSNGIVKLKTAVGKLQRSLSLGRRSNTSQDEFGYEVGDSDSTPVPEDVKEGHFAVVAVNAEEPKRFVVPLSCLTNPTFIRLLDAAAEEYGFDHEGALTVPCRPSELERIVAEEWEEEEENGCIWG

Homology

[Close]

BLAST of Sed0002400 vs. NCBI nr
Match: XP_038902788.1 (auxin-responsive protein SAUR50-like [Benincasa hispida])

HSP 1 Score: 241.5 bits (615), Expect = 4.2e-60
Identity = 120/135 (88.89%), Postives = 127/135 (94.07%), Query Frame = 0


Query: 1   MAKLVPYAKKSNGIVKLKTAVGKLQRSLSLGRRSNTSQDEFGYEVGDSDSTPVPEDVKEG 60
           MAKLV  AKK NGIVKLKTAVGKLQRSLSLGRRS++ QDE  YEVGD +STPVPEDVKEG
Sbjct: 1   MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYEVGDDESTPVPEDVKEG 60

Query: 61  HFAVVAVNAEEPKRFVVPLSCLTNPTFIRLLDAAAEEYGFDHEGALTVPCRPSELERIVA 120
           HFAVVAV+AEEPKRFVVPLSCLTNPTF+RLL+AAAEEYGFDHEGALTVPCRPSELERI+A
Sbjct: 61  HFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERILA 120

Query: 121 EEW-EEEEENGCIWG 135
           EEW EEEEENGCIWG
Sbjct: 121 EEWVEEEEENGCIWG 135

[Close]

BLAST of Sed0002400 vs. NCBI nr
Match: XP_004145816.1 (auxin-responsive protein SAUR50 [Cucumis sativus])

HSP 1 Score: 229.6 bits (584), Expect = 1.6e-56
Identity = 117/135 (86.67%), Postives = 124/135 (91.85%), Query Frame = 0


Query: 1   MAKLVPYAKKSNGIVKLKTAVGKLQRSLSLGRRSNTSQDEFGYEVGDSD-STPVPEDVKE 60
           MAK V  AKK NGIVKLKTAVGKLQRSLSLGRRS++ QDE  Y VGD + STPVPEDVKE
Sbjct: 1   MAKHVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYAVGDDESSTPVPEDVKE 60

Query: 61  GHFAVVAVNAEEPKRFVVPLSCLTNPTFIRLLDAAAEEYGFDHEGALTVPCRPSELERIV 120
           GHFAVVAV+AEEPKRFVVPLSCLTNPTF+RLL+AAAEEYGFDHEGALTVPCRPSELERI+
Sbjct: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL 120

Query: 121 AEEW-EEEEENGCIW 134
           AEEW EEEEENGCIW
Sbjct: 121 AEEWVEEEEENGCIW 135

[Close]

BLAST of Sed0002400 vs. NCBI nr
Match: XP_022140427.1 (auxin-responsive protein SAUR50-like [Momordica charantia])

HSP 1 Score: 229.2 bits (583), Expect = 2.1e-56
Identity = 115/136 (84.56%), Postives = 123/136 (90.44%), Query Frame = 0


Query: 1   MAKLVPYAKKSNGIVKLKTAVGKLQRSLSLGRRSNTSQDEFGYEVGDSDS-TPVPEDVKE 60
           MAKLV  AKK NGIVKLKTAVGKLQRSLSLGRRSN S DEF YE GD DS T VP D+KE
Sbjct: 1   MAKLVTNAKKKNGIVKLKTAVGKLQRSLSLGRRSNASHDEFDYEAGDDDSGTSVPGDIKE 60

Query: 61  GHFAVVAVNAEEPKRFVVPLSCLTNPTFIRLLDAAAEEYGFDHEGALTVPCRPSELERIV 120
           GHFAVVAV+AEEPKRFV PLSCLTNPTF+RLL+AAAEEYGFDHEGALTVPCRPSE+ERI+
Sbjct: 61  GHFAVVAVDAEEPKRFVAPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSEMERIL 120

Query: 121 AEEW-EEEEENGCIWG 135
           AE+W EEEEE+GCIWG
Sbjct: 121 AEQWGEEEEESGCIWG 136

[Close]

BLAST of Sed0002400 vs. NCBI nr
Match: KAE8646889.1 (hypothetical protein Csa_020692 [Cucumis sativus])

HSP 1 Score: 225.3 bits (573), Expect = 3.1e-55
Identity = 116/134 (86.57%), Postives = 123/134 (91.79%), Query Frame = 0


Query: 1   MAKLVPYAKKSNGIVKLKTAVGKLQRSLSLGRRSNTSQDEFGYEVGDSD-STPVPEDVKE 60
           MAK V  AKK NGIVKLKTAVGKLQRSLSLGRRS++ QDE  Y VGD + STPVPEDVKE
Sbjct: 1   MAKHVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYAVGDDESSTPVPEDVKE 60

Query: 61  GHFAVVAVNAEEPKRFVVPLSCLTNPTFIRLLDAAAEEYGFDHEGALTVPCRPSELERIV 120
           GHFAVVAV+AEEPKRFVVPLSCLTNPTF+RLL+AAAEEYGFDHEGALTVPCRPSELERI+
Sbjct: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL 120

Query: 121 AEEW-EEEEENGCI 133
           AEEW EEEEENGCI
Sbjct: 121 AEEWVEEEEENGCI 134

[Close]

BLAST of Sed0002400 vs. NCBI nr
Match: XP_008465358.1 (PREDICTED: auxin-responsive protein SAUR32-like [Cucumis melo] >KAA0035232.1 auxin-responsive protein SAUR32-like [Cucumis melo var. makuwa] >TYK22387.1 auxin-responsive protein SAUR32-like [Cucumis melo var. makuwa])

HSP 1 Score: 222.6 bits (566), Expect = 2.0e-54
Identity = 115/137 (83.94%), Postives = 123/137 (89.78%), Query Frame = 0


Query: 1   MAKLVPYAKKSNGIVKLKTAVGKLQRSLSLGRRSNTSQDEFGYEVG-DSDSTPVPEDVKE 60
           MAKLV  AKK NGIVKLKTAVGKLQRSLSLGRRS++ QDE   EVG D  ST VPEDVKE
Sbjct: 1   MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDDEVGDDGSSTLVPEDVKE 60

Query: 61  GHFAVVAVNAEEPKRFVVPLSCLTNPTFIRLLDAAAEEYGFDHEGALTVPCRPSELERIV 120
           GHFAVVAV+AEEPKRFVVPLSCLTNPTF+RLL+AAAEEYGF+HEGALTVPCRPSELERI+
Sbjct: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFEHEGALTVPCRPSELERIL 120

Query: 121 AEEW---EEEEENGCIW 134
           AEEW   EE+EENGCIW
Sbjct: 121 AEEWVEEEEDEENGCIW 137

[Close]

BLAST of Sed0002400 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.1e-10
Identity = 38/102 (37.25%), Postives = 55/102 (53.92%), Query Frame = 0


Query: 9   KKSNGIVKLKTAVGKLQRSLSLGRRSNTSQDEFGYEVGDSDSTPVPEDVKEGHFAVVAVN 68
           KK++ + +       L+R  SLG+++           G  D   +P DV +GHF V    
Sbjct: 5   KKTSKLTQTAMLKQILKRCSSLGKKNG----------GGYDEDCLPLDVPKGHFPVYV-- 64

Query: 69  AEEPKRFVVPLSCLTNPTFIRLLDAAAEEYGFDHEGALTVPC 111
            E   R++VP+S LT+P F  LL  A EE+GFDH+  LT+PC
Sbjct: 65  GENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPC 94

[Close]

BLAST of Sed0002400 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 9.1e-10
Identity = 27/65 (41.54%), Postives = 43/65 (66.15%), Query Frame = 0


Query: 47  DSDSTPVPEDVKEGHFAVVAVNAEEPKRFVVPLSCLTNPTFIRLLDAAAEEYGFDHEGAL 106
           ++D + +P DV +GHF V     E   R++VP+SCL +PTF  LL  + EE+GF+H+  +
Sbjct: 29  NNDDSGLPNDVPKGHFVVYV--GERRNRYIVPISCLDHPTFQDLLQRSEEEFGFNHDMGI 88

Query: 107 TVPCR 112
            +PC+
Sbjct: 89  IIPCQ 91

[Close]

BLAST of Sed0002400 vs. ExPASy Swiss-Prot
Match: Q9ZUZ3 (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.2e-08
Identity = 27/67 (40.30%), Postives = 41/67 (61.19%), Query Frame = 0


Query: 55  EDVKEGHFAV-VAVNAEEPKRFVVPLSCLTNPTFIRLLDAAAEEYGFDHEGALTVPCRPS 114
           +DV +G  A+ V    EE +RF+VP+    +P F++LL  A +EYGFD +G +T+PC   
Sbjct: 22  KDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVE 81

Query: 115 ELERIVA 121
           E   + A
Sbjct: 82  EFRYVQA 88

[Close]

BLAST of Sed0002400 vs. ExPASy Swiss-Prot
Match: P33079 (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.9e-07
Identity = 27/66 (40.91%), Postives = 40/66 (60.61%), Query Frame = 0


Query: 56  DVKEGHFAVVAVNAEEPKRFVVPLSCLTNPTFIRLLDAAAEEYGFDHE-GALTVPCRPSE 115
           DV +G+ AV     ++ +RF +P+S L  P+F  LL  A EE+G+DH  G LT+PC+  E
Sbjct: 25  DVPKGYAAVYV--GDKMRRFTIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLTIPCKEEE 84

Query: 116 LERIVA 121
              + A
Sbjct: 85  FLNVTA 88

[Close]

BLAST of Sed0002400 vs. ExPASy Swiss-Prot
Match: P33082 (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.5e-07
Identity = 28/64 (43.75%), Postives = 39/64 (60.94%), Query Frame = 0


Query: 56  DVKEGHFAVVAVNAEEPKRFVVPLSCLTNPTFIRLLDAAAEEYGFDHE-GALTVPCRPSE 115
           D  +G+ AV     E+ KRFV+P+S +  P+F  LL  A EE+G+DH  G LT+PC    
Sbjct: 16  DAPKGYLAVYV--GEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEV 75

Query: 116 LERI 119
            +RI
Sbjct: 76  FQRI 77

[Close]

BLAST of Sed0002400 vs. ExPASy TrEMBL
Match: A0A0A0KGI2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G147590 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 7.9e-57
Identity = 117/135 (86.67%), Postives = 124/135 (91.85%), Query Frame = 0


Query: 1   MAKLVPYAKKSNGIVKLKTAVGKLQRSLSLGRRSNTSQDEFGYEVGDSD-STPVPEDVKE 60
           MAK V  AKK NGIVKLKTAVGKLQRSLSLGRRS++ QDE  Y VGD + STPVPEDVKE
Sbjct: 1   MAKHVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDYAVGDDESSTPVPEDVKE 60

Query: 61  GHFAVVAVNAEEPKRFVVPLSCLTNPTFIRLLDAAAEEYGFDHEGALTVPCRPSELERIV 120
           GHFAVVAV+AEEPKRFVVPLSCLTNPTF+RLL+AAAEEYGFDHEGALTVPCRPSELERI+
Sbjct: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERIL 120

Query: 121 AEEW-EEEEENGCIW 134
           AEEW EEEEENGCIW
Sbjct: 121 AEEWVEEEEENGCIW 135

[Close]

BLAST of Sed0002400 vs. ExPASy TrEMBL
Match: A0A6J1CGW5 (auxin-responsive protein SAUR50-like OS=Momordica charantia OX=3673 GN=LOC111011107 PE=3 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.0e-56
Identity = 115/136 (84.56%), Postives = 123/136 (90.44%), Query Frame = 0


Query: 1   MAKLVPYAKKSNGIVKLKTAVGKLQRSLSLGRRSNTSQDEFGYEVGDSDS-TPVPEDVKE 60
           MAKLV  AKK NGIVKLKTAVGKLQRSLSLGRRSN S DEF YE GD DS T VP D+KE
Sbjct: 1   MAKLVTNAKKKNGIVKLKTAVGKLQRSLSLGRRSNASHDEFDYEAGDDDSGTSVPGDIKE 60

Query: 61  GHFAVVAVNAEEPKRFVVPLSCLTNPTFIRLLDAAAEEYGFDHEGALTVPCRPSELERIV 120
           GHFAVVAV+AEEPKRFV PLSCLTNPTF+RLL+AAAEEYGFDHEGALTVPCRPSE+ERI+
Sbjct: 61  GHFAVVAVDAEEPKRFVAPLSCLTNPTFLRLLEAAAEEYGFDHEGALTVPCRPSEMERIL 120

Query: 121 AEEW-EEEEENGCIWG 135
           AE+W EEEEE+GCIWG
Sbjct: 121 AEQWGEEEEESGCIWG 136

[Close]

BLAST of Sed0002400 vs. ExPASy TrEMBL
Match: A0A5D3DFC2 (Auxin-responsive protein SAUR32-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold173G00110 PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 9.7e-55
Identity = 115/137 (83.94%), Postives = 123/137 (89.78%), Query Frame = 0


Query: 1   MAKLVPYAKKSNGIVKLKTAVGKLQRSLSLGRRSNTSQDEFGYEVG-DSDSTPVPEDVKE 60
           MAKLV  AKK NGIVKLKTAVGKLQRSLSLGRRS++ QDE   EVG D  ST VPEDVKE
Sbjct: 1   MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDDEVGDDGSSTLVPEDVKE 60

Query: 61  GHFAVVAVNAEEPKRFVVPLSCLTNPTFIRLLDAAAEEYGFDHEGALTVPCRPSELERIV 120
           GHFAVVAV+AEEPKRFVVPLSCLTNPTF+RLL+AAAEEYGF+HEGALTVPCRPSELERI+
Sbjct: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFEHEGALTVPCRPSELERIL 120

Query: 121 AEEW---EEEEENGCIW 134
           AEEW   EE+EENGCIW
Sbjct: 121 AEEWVEEEEDEENGCIW 137

[Close]

BLAST of Sed0002400 vs. ExPASy TrEMBL
Match: A0A1S3CNL2 (auxin-responsive protein SAUR32-like OS=Cucumis melo OX=3656 GN=LOC103502995 PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 9.7e-55
Identity = 115/137 (83.94%), Postives = 123/137 (89.78%), Query Frame = 0


Query: 1   MAKLVPYAKKSNGIVKLKTAVGKLQRSLSLGRRSNTSQDEFGYEVG-DSDSTPVPEDVKE 60
           MAKLV  AKK NGIVKLKTAVGKLQRSLSLGRRS++ QDE   EVG D  ST VPEDVKE
Sbjct: 1   MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRSDSGQDECDDEVGDDGSSTLVPEDVKE 60

Query: 61  GHFAVVAVNAEEPKRFVVPLSCLTNPTFIRLLDAAAEEYGFDHEGALTVPCRPSELERIV 120
           GHFAVVAV+AEEPKRFVVPLSCLTNPTF+RLL+AAAEEYGF+HEGALTVPCRPSELERI+
Sbjct: 61  GHFAVVAVDAEEPKRFVVPLSCLTNPTFLRLLEAAAEEYGFEHEGALTVPCRPSELERIL 120

Query: 121 AEEW---EEEEENGCIW 134
           AEEW   EE+EENGCIW
Sbjct: 121 AEEWVEEEEDEENGCIW 137

[Close]

BLAST of Sed0002400 vs. ExPASy TrEMBL
Match: A0A6J1K3Y0 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111491474 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 9.0e-53
Identity = 111/129 (86.05%), Postives = 117/129 (90.70%), Query Frame = 0


Query: 1   MAKLVPYAKKSNGIVKLKTAVGKLQRSLSLGRRSNTSQDEFGYEVGDSDSTPVPEDVKEG 60
           MAK    AKK NGIVKLKTAVG+LQRSLSLGRRSN+   EF  EVGD DSTPVPEDVKEG
Sbjct: 1   MAKPEASAKK-NGIVKLKTAVGRLQRSLSLGRRSNSGLHEFDREVGDDDSTPVPEDVKEG 60

Query: 61  HFAVVAVNAEEPKRFVVPLSCLTNPTFIRLLDAAAEEYGFDHEGALTVPCRPSELERIVA 120
           HFAVVAV+AEEPKRFVVPLSCL NPTF+RLL+AAAEEYGFDHEGALTVPCRPSELERI+A
Sbjct: 61  HFAVVAVDAEEPKRFVVPLSCLNNPTFLRLLEAAAEEYGFDHEGALTVPCRPSELERILA 120

Query: 121 EEWEEEEEN 130
           EEWEEEEEN
Sbjct: 121 EEWEEEEEN 128

[Close]

BLAST of Sed0002400 vs. TAIR 10
Match: AT2G28085.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 104.8 bits (260), Expect = 5.6e-23
Identity = 57/117 (48.72%), Postives = 72/117 (61.54%), Query Frame = 0


Query: 9   KKSNGIVKLKTAVGKLQRSLSLGRRSNTSQDEFGYEVGDSDSTPVPEDVKEGHFAVVAVN 68
           KK  GIVKLK  V +L +            +E+G +        VP+DVKEGHFAV+AV+
Sbjct: 14  KKMGGIVKLKNVVERLVQIKGFSSAKKPCPEEYGRDC-------VPKDVKEGHFAVIAVD 73

Query: 69  A--EEPKRFVVPLSCLTNPTFIRLLDAAAEEYGFDHEGALTVPCRPSELERIVAEEW 124
              E  +RFVVPL  L +P F +LL+ A EEYGF H+GAL VPCRPS L  I+ E+W
Sbjct: 74  GYHEPTQRFVVPLMFLEHPMFRKLLEQAEEEYGFYHDGALMVPCRPSHLRMILTEQW 123

[Close]

BLAST of Sed0002400 vs. TAIR 10
Match: AT3G09870.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 84.3 bits (207), Expect = 7.9e-17
Identity = 44/104 (42.31%), Postives = 62/104 (59.62%), Query Frame = 0


Query: 16  KLKTAVGKLQRSLSLGRRSNTSQDEFGYEVGDSDSTPVPEDVKEGHFAVVAVNAEEPKRF 75
           K K  + KLQ      R S    +   +E   + ++ +P DVKEGH AV+AV  E  KRF
Sbjct: 4   KFKIFMRKLQICCLFTRFSKRVGNYCEFEEEGNAASMIPSDVKEGHVAVIAVKGERIKRF 63

Query: 76  VVPLSCLTNPTFIRLLDAAAEEYGFDHEGALTVPCRPSELERIV 120
           V+ L  L  P F+RLL+ A EE+GF   G LT+PC+P E+++I+
Sbjct: 64  VLELEELNKPEFLRLLEQAREEFGFQPRGPLTIPCQPEEVQKIL 107

[Close]

BLAST of Sed0002400 vs. TAIR 10
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 65.9 bits (159), Expect = 2.9e-11
Identity = 38/102 (37.25%), Postives = 55/102 (53.92%), Query Frame = 0


Query: 9   KKSNGIVKLKTAVGKLQRSLSLGRRSNTSQDEFGYEVGDSDSTPVPEDVKEGHFAVVAVN 68
           KK++ + +       L+R  SLG+++           G  D   +P DV +GHF V    
Sbjct: 5   KKTSKLTQTAMLKQILKRCSSLGKKNG----------GGYDEDCLPLDVPKGHFPVYV-- 64

Query: 69  AEEPKRFVVPLSCLTNPTFIRLLDAAAEEYGFDHEGALTVPC 111
            E   R++VP+S LT+P F  LL  A EE+GFDH+  LT+PC
Sbjct: 65  GENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPC 94

[Close]

BLAST of Sed0002400 vs. TAIR 10
Match: AT1G19830.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 65.5 bits (158), Expect = 3.8e-11
Identity = 36/96 (37.50%), Postives = 53/96 (55.21%), Query Frame = 0


Query: 24  LQRSLSLGRRSNTSQDEFGYEVGDSDSTPVPEDVKEGHFAVVAVNAEEPKRFVVPLSCLT 83
           L+R  SLG++ ++  ++     GDS    +P DV +GHF V         R+V+P+S LT
Sbjct: 19  LKRCSSLGKKQSSEYNDTHEHDGDS----LPLDVPKGHFVVYV--GGNRVRYVLPISFLT 78

Query: 84  NPTFIRLLDAAAEEYGFDHEGALTVPCRPSELERIV 120
            P F  LL  A EE+GFDH   LT+PC     + ++
Sbjct: 79  RPEFQLLLQQAEEEFGFDHNMGLTIPCEEVAFKSLI 108

[Close]

BLAST of Sed0002400 vs. TAIR 10
Match: AT1G75580.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 64.7 bits (156), Expect = 6.5e-11
Identity = 39/102 (38.24%), Postives = 53/102 (51.96%), Query Frame = 0


Query: 9   KKSNGIVKLKTAVGKLQRSLSLGRRSNTSQDEFGYEVGDSDSTPVPEDVKEGHFAVVAVN 68
           KK+N + +       L+R  SLG++ +    E        D    P +V +GHF V    
Sbjct: 4   KKANKLTQTAMIKQILKRCSSLGKKQSNVYGE--------DENGSPLNVPKGHFVVYV-- 63

Query: 69  AEEPKRFVVPLSCLTNPTFIRLLDAAAEEYGFDHEGALTVPC 111
            E   R+VVP+S LT P F  LL  A EE+GFDH+  LT+PC
Sbjct: 64  GENRVRYVVPISFLTRPEFQLLLQQAEEEFGFDHDMGLTIPC 95

The following BLAST results are available for this feature:

BLAST of Sed0002400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902788.1	4.2e-60	88.89	auxin-responsive protein SAUR50-like [Benincasa hispida]	[more]
XP_004145816.1	1.6e-56	86.67	auxin-responsive protein SAUR50 [Cucumis sativus]	[more]
XP_022140427.1	2.1e-56	84.56	auxin-responsive protein SAUR50-like [Momordica charantia]	[more]
KAE8646889.1	3.1e-55	86.57	hypothetical protein Csa_020692 [Cucumis sativus]	[more]
XP_008465358.1	2.0e-54	83.94	PREDICTED: auxin-responsive protein SAUR32-like [Cucumis melo] >KAA0035232.1 aux...	[more]

BLAST of Sed0002400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65695	4.1e-10	37.25	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
P0DKL1	9.1e-10	41.54	Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1	[more]
Q9ZUZ3	2.2e-08	40.30	Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 S...	[more]
P33079	1.9e-07	40.91	Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1	[more]
P33082	2.5e-07	43.75	Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of Sed0002400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGI2	7.9e-57	86.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G147590 PE=3 SV=1	[more]
A0A6J1CGW5	1.0e-56	84.56	auxin-responsive protein SAUR50-like OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A5D3DFC2	9.7e-55	83.94	Auxin-responsive protein SAUR32-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3CNL2	9.7e-55	83.94	auxin-responsive protein SAUR32-like OS=Cucumis melo OX=3656 GN=LOC103502995 PE=...	[more]
A0A6J1K3Y0	9.0e-53	86.05	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111491474...	[more]

BLAST of Sed0002400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28085.1	5.6e-23	48.72	SAUR-like auxin-responsive protein family	[more]
AT3G09870.1	7.9e-17	42.31	SAUR-like auxin-responsive protein family	[more]
AT4G34760.1	2.9e-11	37.25	SAUR-like auxin-responsive protein family	[more]
AT1G19830.1	3.8e-11	37.50	SAUR-like auxin-responsive protein family	[more]
AT1G75580.1	6.5e-11	38.24	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 33..119 e-value: 1.3E-19 score: 70.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..54
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 21..128
None	No IPR available	PANTHER	PTHR31374:SF334	AUXIN-RESPONSIVE PROTEIN SAUR32-LIKE	coord: 21..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002400.1	Sed0002400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin