
Sed0002356 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTGATATTGGCCTCTCCGTTTAGAATCTTATTATCAATTTCATAAGAGGGTCGCATCAAAAAACCTATGTTGTATCCCAATCAGAGGTTCTATTATAATTTCATAATTTTTTCAAAAAAAAAATTCATAAAGTTTGTTGCATTTCAAAACCCAAGATCTCCACTTTTATACCCCATCTTATTTTGAATTCCATTTCAAAATCAATCACACTGAATAGCCCCACATAATGGATAGACCCAAATCTCGCCCATCCACCGCCGATCTCCTCACTTGGTCGGAGGTTCCCCCGCCGGAATCTTCCCCCGCCGCCGCTCGCTCCCACCAGGTACTAAACCCTCTTTCCTATCACCATTCTTTTTCCTTCCTTAGTTTCAGGGCAGCTTTGTTTTGAGGTTTTTTCTGGTACATTCTTCTCAGCCGTCCGATAGAATCGGTAAATTGCTCCAAGGGGGTCACCTCACAGATGAAGAAGCTGAGAGCCTGTTGGTAAAGTAAGATCCATTTCCTCTTTTCTGAAATTTCCCCCCCAAAAAATCCTGGGATTTGACTGTTGTGATGAAACTAGCACAATTTTATAATGTCTCGCCTGATTTGCTGTTTTATTCTTTGTGGGTTACTGTTTGTTTGAAATAGAATCCAAACAAAGCTCTTCTGATCTCCCAGCTGTGATCTTTTTCTTTCTATTTGTGTTCTTTAGCTAATTTCCACACTGTTTCATGTTTTAGGATTTTGAGAAAAGAGAAAATTATGTCGATTTGCATTTTGTGCTCTAACATTATACTATTTGTGGAATGGAATCTATGTTATAATATTTTCCACTTCTATTTGTCTTAAGCGCTGCCTTGTTGGTAGAGGTTTGAGGTCTAGAACCTATGCTTTGAGAACATTCATGTTCAAAGCCCACGAATGACTTTAATTATAAAATCTCTTGGTTGTCGTTTGGTTCCGAGTCTTGGAACGGGCGCCGGTGCCTCCAAATATATAGCGGGTGAAGTCGATTCCCGATCATCAAAAAAATATGTGTCCCGCTAGAATCCTGTTCCTCAAACTAGTCAACAGTTCATATGCATCCTTTATGGCTAGTCTTCCTATACTTAGTGTTGGAAATTAGAATTCTTCTCCACCAATTTCAGGAAGAACTGTTCAGGATATAAAATGAAGGAGATGAGTGGAAGTGGAATTTTTGCATCAAATGGTGAAGGGGAAGCTTCAGAACCAGATAACAAAACAGGGCTGCGCATGTATCAGGTAAGCAAAACAATCAAGTCAATTTAGAAACTGCATTGAATTGATTAAAACTCTTTGTGATTCTTTGTAATTGTTGGATGGTTCAGCAAGCTTTGAATGGAGTAAGTCAAATATCCTTTGCTACTGAAGAGGGGTTGTCTCCCAAAAAGCCTACTTCAATTCCAGAAGTGGCCAAGCAACGTGAGTTAAGTGGGACATTGCAGAGTGAAGCCGATGCCAGGACTAAGAAGCAGACATCAGATGCTAAGAACAAGGAGCTTAGTGGCCACAACATCTTCGGAGCTCCTCCCGAAATAATTCCACGATCGTTGGCAGCCGTGCGGAGCTTGGAGTCGAAAGAAAGCAAAGACATGGGCGAACCAGCTCCTCGCACCCTCAGAACATCTGTTAAAGTTTCTAATGTGAGTTTACTACTTTTATTTTTGAAACAATGTGAGTTTACTACTTGCATTGTACTTCTATCATTGTCTTTGTTTTTGCAAAGAATTTGTGCACATTTCCATTCAATTGATTTTGTCGACTCTCTGGCTTCAAGACTTCACATTCTCATTTTAGCTTTAGCATTCTCTTTTTTTCTCTATCTAGGTAATGTTTCTAATCTTGAAAATTTGAGTTCATATGTTGAATATTGAAAGTTGGAGTGTCTTTTCCAATCTGATAATTCTAGAGAGTTGTTCTGGATTGGAAGTAAACTCCGTTAGGTTGTGATTTGATCTTTCGTTTTGTTGAATCATGTTAAATCACGCTTTTGTATTGGTTAGTGGTTTAAATAATTTAAACATGGTATCAGGGTAGGAGGTTCTAAGTTCAAATTCCTACTCAGTCGTTTTCCTCTCTAATTAGAATTGAATTCTTTTAGTAGAGTATTTCTCAAATTTTCAAACCTACAAGTGAGAGGAAGTGTTCGTTGATATAATTAAATGTACCTCAACCTAACTGTTTTAGTTTTTAGATTGATCAGTGATTTACATATCGTTGCTAGCTATAAAACTCAAAACGTCGTTGGCATGTTCATCTTTTACAGCCTGCTGGAGGTCAAAGTAACATCCTGTTTGGCGAAGACCCAGTTATCAAGTCAGCAAAGAAACTACACAACCAGAAGTTTCAAGAGTTGACTGGTAACGATATATTTAAAGGAGATGCTCCACCGGGTTCCTCTGAGAAAGCTTTGAGCTCAGCCAAGCTTAGGGAGATGAGCGGCAACGACATCTTTGCTGACGGGAAGGCAGAATCGAGGGACTACTTTGGAGGTGTTCGTAAACCACCTGGTGGAGAAAGCACCATTGCCTTGGTTTAATTGTAGTTCCTAACTTGATTTGAATTGTTGGACATTCTTGTCATTATGTGTTTCTACTTGAACTCATAATTTTATTTTACTGATCAGTTGCACTTATATAGCCTATGATGAGAAAAGTTGGGGAGCTAAAAGTTGCTGTGTGTTTTGTTTCATATCTCTGGTTTTGGTTTTTTATGTTTCTTTTAACCATAGCTTTATCAATAGTTCACTAAAACAAAATTAATTTCTTCACTTTTCATTGATCTCTGGAGATAGACCATTTAAAAAAAAAGAAGAGAGAGATAGAC GTTGATATTGGCCTCTCCGTTTAGAATCTTATTATCAATTTCATAAGAGGGTCGCATCAAAAAACCTATGTTGTATCCCAATCAGAGGTTCTATTATAATTTCATAATTTTTTCAAAAAAAAAATTCATAAAGTTTGTTGCATTTCAAAACCCAAGATCTCCACTTTTATACCCCATCTTATTTTGAATTCCATTTCAAAATCAATCACACTGAATAGCCCCACATAATGGATAGACCCAAATCTCGCCCATCCACCGCCGATCTCCTCACTTGGTCGGAGGTTCCCCCGCCGGAATCTTCCCCCGCCGCCGCTCGCTCCCACCAGCCGTCCGATAGAATCGGTAAATTGCTCCAAGGGGGTCACCTCACAGATGAAGAAGCTGAGAGCCTGTTGGTAAAGAAGAACTGTTCAGGATATAAAATGAAGGAGATGAGTGGAAGTGGAATTTTTGCATCAAATGGTGAAGGGGAAGCTTCAGAACCAGATAACAAAACAGGGCTGCGCATGTATCAGCAAGCTTTGAATGGAGTAAGTCAAATATCCTTTGCTACTGAAGAGGGGTTGTCTCCCAAAAAGCCTACTTCAATTCCAGAAGTGGCCAAGCAACGTGAGTTAAGTGGGACATTGCAGAGTGAAGCCGATGCCAGGACTAAGAAGCAGACATCAGATGCTAAGAACAAGGAGCTTAGTGGCCACAACATCTTCGGAGCTCCTCCCGAAATAATTCCACGATCGTTGGCAGCCGTGCGGAGCTTGGAGTCGAAAGAAAGCAAAGACATGGGCGAACCAGCTCCTCGCACCCTCAGAACATCTGTTAAAGTTTCTAATCCTGCTGGAGGTCAAAGTAACATCCTGTTTGGCGAAGACCCAGTTATCAAGTCAGCAAAGAAACTACACAACCAGAAGTTTCAAGAGTTGACTGGTAACGATATATTTAAAGGAGATGCTCCACCGGGTTCCTCTGAGAAAGCTTTGAGCTCAGCCAAGCTTAGGGAGATGAGCGGCAACGACATCTTTGCTGACGGGAAGGCAGAATCGAGGGACTACTTTGGAGGTGTTCGTAAACCACCTGGTGGAGAAAGCACCATTGCCTTGGTTTAATTGTAGTTCCTAACTTGATTTGAATTGTTGGACATTCTTGTCATTATGTGTTTCTACTTGAACTCATAATTTTATTTTACTGATCAGTTGCACTTATATAGCCTATGATGAGAAAAGTTGGGGAGCTAAAAGTTGCTGTGTGTTTTGTTTCATATCTCTGGTTTTGGTTTTTTATGTTTCTTTTAACCATAGCTTTATCAATAGTTCACTAAAACAAAATTAATTTCTTCACTTTTCATTGATCTCTGGAGATAGACCATTTAAAAAAAAAGAAGAGAGAGATAGAC ATGGATAGACCCAAATCTCGCCCATCCACCGCCGATCTCCTCACTTGGTCGGAGGTTCCCCCGCCGGAATCTTCCCCCGCCGCCGCTCGCTCCCACCAGCCGTCCGATAGAATCGGTAAATTGCTCCAAGGGGGTCACCTCACAGATGAAGAAGCTGAGAGCCTGTTGGTAAAGAAGAACTGTTCAGGATATAAAATGAAGGAGATGAGTGGAAGTGGAATTTTTGCATCAAATGGTGAAGGGGAAGCTTCAGAACCAGATAACAAAACAGGGCTGCGCATGTATCAGCAAGCTTTGAATGGAGTAAGTCAAATATCCTTTGCTACTGAAGAGGGGTTGTCTCCCAAAAAGCCTACTTCAATTCCAGAAGTGGCCAAGCAACGTGAGTTAAGTGGGACATTGCAGAGTGAAGCCGATGCCAGGACTAAGAAGCAGACATCAGATGCTAAGAACAAGGAGCTTAGTGGCCACAACATCTTCGGAGCTCCTCCCGAAATAATTCCACGATCGTTGGCAGCCGTGCGGAGCTTGGAGTCGAAAGAAAGCAAAGACATGGGCGAACCAGCTCCTCGCACCCTCAGAACATCTGTTAAAGTTTCTAATCCTGCTGGAGGTCAAAGTAACATCCTGTTTGGCGAAGACCCAGTTATCAAGTCAGCAAAGAAACTACACAACCAGAAGTTTCAAGAGTTGACTGGTAACGATATATTTAAAGGAGATGCTCCACCGGGTTCCTCTGAGAAAGCTTTGAGCTCAGCCAAGCTTAGGGAGATGAGCGGCAACGACATCTTTGCTGACGGGAAGGCAGAATCGAGGGACTACTTTGGAGGTGTTCGTAAACCACCTGGTGGAGAAAGCACCATTGCCTTGGTTTAA MDRPKSRPSTADLLTWSEVPPPESSPAAARSHQPSDRIGKLLQGGHLTDEEAESLLVKKNCSGYKMKEMSGSGIFASNGEGEASEPDNKTGLRMYQQALNGVSQISFATEEGLSPKKPTSIPEVAKQRELSGTLQSEADARTKKQTSDAKNKELSGHNIFGAPPEIIPRSLAAVRSLESKESKDMGEPAPRTLRTSVKVSNPAGGQSNILFGEDPVIKSAKKLHNQKFQELTGNDIFKGDAPPGSSEKALSSAKLREMSGNDIFADGKAESRDYFGGVRKPPGGESTIALV Homology
BLAST of Sed0002356 vs. NCBI nr
Match: XP_038882038.1 (uncharacterized protein LOC120073332 [Benincasa hispida]) HSP 1 Score: 515.8 bits (1327), Expect = 2.5e-142 Identity = 267/291 (91.75%), Postives = 278/291 (95.53%), Query Frame = 0
BLAST of Sed0002356 vs. NCBI nr
Match: XP_023544370.1 (uncharacterized protein LOC111803974 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 513.5 bits (1321), Expect = 1.2e-141 Identity = 264/291 (90.72%), Postives = 278/291 (95.53%), Query Frame = 0
BLAST of Sed0002356 vs. NCBI nr
Match: XP_022978539.1 (uncharacterized protein LOC111478490 [Cucurbita maxima]) HSP 1 Score: 513.1 bits (1320), Expect = 1.6e-141 Identity = 264/291 (90.72%), Postives = 277/291 (95.19%), Query Frame = 0
BLAST of Sed0002356 vs. NCBI nr
Match: XP_008440596.1 (PREDICTED: uncharacterized protein LOC103484972 [Cucumis melo] >KAA0036301.1 DUF4057 domain-containing protein [Cucumis melo var. makuwa] >TYK12695.1 DUF4057 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 511.5 bits (1316), Expect = 4.7e-141 Identity = 265/291 (91.07%), Postives = 276/291 (94.85%), Query Frame = 0
BLAST of Sed0002356 vs. NCBI nr
Match: KAG6604031.1 (DNA oxidative demethylase ALKBH2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034195.1 DNA oxidative demethylase ALKBH2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 511.1 bits (1315), Expect = 6.1e-141 Identity = 263/291 (90.38%), Postives = 277/291 (95.19%), Query Frame = 0
BLAST of Sed0002356 vs. ExPASy Swiss-Prot
Match: Q9SIE0 (DNA oxidative demethylase ALKBH2 OS=Arabidopsis thaliana OX=3702 GN=ALKBH2 PE=2 SV=2) HSP 1 Score: 55.5 bits (132), Expect = 1.2e-06 Identity = 30/62 (48.39%), Postives = 44/62 (70.97%), Query Frame = 0
BLAST of Sed0002356 vs. ExPASy TrEMBL
Match: A0A6J1IUB1 (uncharacterized protein LOC111478490 OS=Cucurbita maxima OX=3661 GN=LOC111478490 PE=4 SV=1) HSP 1 Score: 513.1 bits (1320), Expect = 7.8e-142 Identity = 264/291 (90.72%), Postives = 277/291 (95.19%), Query Frame = 0
BLAST of Sed0002356 vs. ExPASy TrEMBL
Match: A0A5A7T420 (DUF4057 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002830 PE=4 SV=1) HSP 1 Score: 511.5 bits (1316), Expect = 2.3e-141 Identity = 265/291 (91.07%), Postives = 276/291 (94.85%), Query Frame = 0
BLAST of Sed0002356 vs. ExPASy TrEMBL
Match: A0A1S3B283 (uncharacterized protein LOC103484972 OS=Cucumis melo OX=3656 GN=LOC103484972 PE=4 SV=1) HSP 1 Score: 511.5 bits (1316), Expect = 2.3e-141 Identity = 265/291 (91.07%), Postives = 276/291 (94.85%), Query Frame = 0
BLAST of Sed0002356 vs. ExPASy TrEMBL
Match: A0A6J1GEN2 (uncharacterized protein LOC111453274 OS=Cucurbita moschata OX=3662 GN=LOC111453274 PE=4 SV=1) HSP 1 Score: 507.3 bits (1305), Expect = 4.3e-140 Identity = 262/291 (90.03%), Postives = 276/291 (94.85%), Query Frame = 0
BLAST of Sed0002356 vs. ExPASy TrEMBL
Match: A0A0A0KLX1 (DUF4057 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G500430 PE=4 SV=1) HSP 1 Score: 505.0 bits (1299), Expect = 2.1e-139 Identity = 261/291 (89.69%), Postives = 274/291 (94.16%), Query Frame = 0
BLAST of Sed0002356 vs. TAIR 10
Match: AT4G39860.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G22270.1); Has 152 Blast hits to 146 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 146; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 384.8 bits (987), Expect = 6.1e-107 Identity = 201/288 (69.79%), Postives = 239/288 (82.99%), Query Frame = 0
BLAST of Sed0002356 vs. TAIR 10
Match: AT4G39860.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G22270.1); Has 148 Blast hits to 144 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 378.3 bits (970), Expect = 5.7e-105 Identity = 200/288 (69.44%), Postives = 238/288 (82.64%), Query Frame = 0
BLAST of Sed0002356 vs. TAIR 10
Match: AT1G78150.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G35780.1); Has 152 Blast hits to 146 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 292.0 bits (746), Expect = 5.4e-79 Identity = 163/291 (56.01%), Postives = 207/291 (71.13%), Query Frame = 0
BLAST of Sed0002356 vs. TAIR 10
Match: AT1G78150.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G35780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 292.0 bits (746), Expect = 5.4e-79 Identity = 163/291 (56.01%), Postives = 207/291 (71.13%), Query Frame = 0
BLAST of Sed0002356 vs. TAIR 10
Match: AT1G78150.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G35780.1). ) HSP 1 Score: 280.4 bits (716), Expect = 1.6e-75 Identity = 163/320 (50.94%), Postives = 209/320 (65.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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