Sed0002345 (gene) Chayote v1

Overview


Name	Sed0002345
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG14: 19504035 .. 19506404 (+)
RNA-Seq Expression	Sed0002345
Synteny	Sed0002345

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGTTTCTTTTAGCCGTTTGTCATTGTGGTTCTGGACTGGTAAAGAGAAAGAGCCTATTCCAAATGGGTCTCCTTCAAATTCTTCATCTGAGCTCGGTTCCGGTCTGCGAGAACCGGAGAGGCTCAAGCTCAAGAGGGGGCTGGAGTTGGGTTCATCTTCAAAGAAGGTGAAGAACCAGAAATGGGAAAGTAAGAAAGAAACAGCAAGGATTGAGTGGGAGATGGTTGAGTCTGGTGATGAGGCTGATTGGTCCATTGGTTGGTTGGAGCCTCATGGTCCTGGGTTTCAGAATGATGATAGTTTTGCGGTTCTGGTTCCTTCTTATAGCAATCGTTGCAAGGAGGTTGTGGAGGGTTCAAATGTTGAGCTTTTGGCTGCCATCAAGAATCTTCAAAATGAGCTCTCACCTGGTAAGGTCTTCTGTTTTTGGTGTGCCTTGTACTGTTGTTTGATCTAATGCTTTGTGTCATGTTGCTATTTGTTCCTATATCATGGTGGATTGAGGTCCAAGCGAACTTGTAATTGAGTTCAATTCATGGTGATCATCTATTTAGGAATCATTTTCTATAGGTTCTCTTACAGTTAAATATAGTAGCGTCAGTCAATTATAGTCAAGGAGTCATTATGCATTGATCTAGTGGTAAAAAAGGATTTGAGAATGGTTCCTTGGTTGCCACCTATCTAGAAATTAATTATGCAAGTCCTTGGTTGCCACCTATCTAGAAATTAATCACGGAAGTCCTTGAGATCCAAATATTGTAGGGTCAACTAGGTTATCTGAGGTGGGCATAAACTGGTCTGAATACTCCAACTTGAGTGGAAAACAAATATGGTGTTTTTTTCTTTTGTTTACTGTGATTCTTTTTGAGCTGGATTTATTTTACTGTCATTACTGCTGCATTTGGGAGATGAGAGTATTGAATGGTTTTTAAGAGACGATTCTTGAAATTTGGGAGCACATTTATAGGGCATGTTTTGGAGCTGTTCTTGGTAATAGTGGTCAATGAGGTTTTGATTTTCCAAGGATGAACTATAAAAGAACAAATTAAAGATAAATGAGTTGAAAACAGCGTTCAATAAACAGTTACCTGCTAATGTTTTTCTTGAGTTTCTTAAAAAACGAAACAAAATGCTTTTCAAAAGAGCTCCTAAACAGCTACTATGTGTTATCAATCATCGTGTTTTCTTCATAGTCAGCAACTGCTTGACCTTAGATTTTTTTTTAAAACAAAGGTAACCACGCCTGCTGGACTTTAGATTTAGTGGATGAATAGCTGAAATGAGTTGAAAACAACGTTTAAAAAATAGTTAATTGCACATGTCTCTCTTTAATCCTTATTAATAAAAGTTAAAACAGAGTTCTTATCAAAATAGCTCTCAAACAGTCCCTATATGTTATTAATTATCGTATTTTCTTTATCTAATGGAATAAAGTTCTGGTGGATGTATAGCTGCAAGACTGTAATATTCAGATCTCTCTTTCGAGAGACTAATTTTATTCATTGATTTATTTATTTTGTGCTGAACTGGTCTGTTAGTCATCTCTTGTATGAATTGCATAAGTTTCTAAACTTTATGATTTGAAGGAAGCAACATCAGACAACTTAGCATCATGTCACAATTGTGTTCTTGGACAAGCATCAGATTTTAGATTAAAACGAAAAATCATGGACCTAAGGAAACATATCATGGTGGAAGCTGGTCAGCTGTAGGGTGATAGGTTAACATCCAAATTTCTCCTCTTTGATGTGCTGTTTGGTAATTTACTTTGCGTTCTATTAATTGTCGTTTGAGTTGTCGTCGTTATTTCTGGCGTGTTTTCGTTTCTTAACCATGCTTCATTCTGGACTTTGTTTTTAATGATTTGGCCATTACCGAGGAATGAGCTTCTAAAGTTGCAGAAAAATGACTGGCATGTTACAATTCCTTGGAACTATAGTCTGGAGTCCTCAGATGTAGTAGCTTGATGATCAGTATGTTTCCAAGCTGATAAAGCTAAATACTTCAACTCACTTTGTTGTGTTTTTAAAAATGACCTGCTCAAAATATTCGCCTTCAATCTCCTAAACTATTTTTTGAGTTCAATATTTGGGCAGAGGAATTCGAACCCATGAACTGAGCTGAGCTACTGCTCTTGTCGACTTCCATCTACTAAACTAAGTAGAGAGATCTCGACCACGCCTTTTCATTATTGTACTTGCATTATATAAATGAAGGGAAAGTGCAAAAAAGAAAAGCTTTCTGTAAATAGTTTTGCAGCTGATGAAAATCTTCAACATCTAAGTTTGAATGCACCTTATCTTATGCAGAGAGCAAGCAGAATATGGAGCTGTGGCTTTCTTCCCTGCAAAACTCAGAAGCTTGA

mRNA sequence

ATGGCTGTTTCTTTTAGCCGTTTGTCATTGTGGTTCTGGACTGGTAAAGAGAAAGAGCCTATTCCAAATGGGTCTCCTTCAAATTCTTCATCTGAGCTCGGTTCCGGTCTGCGAGAACCGGAGAGGCTCAAGCTCAAGAGGGGGCTGGAGTTGGGTTCATCTTCAAAGAAGGTGAAGAACCAGAAATGGGAAAGTAAGAAAGAAACAGCAAGGATTGAGTGGGAGATGGTTGAGTCTGGTGATGAGGCTGATTGGTCCATTGGTTGGTTGGAGCCTCATGGTCCTGGGTTTCAGAATGATGATAGTTTTGCGGTTCTGGTTCCTTCTTATAGCAATCGTTGCAAGGAGGTTGTGGAGGGTTCAAATGTTGAGCTTTTGGCTGCCATCAAGAATCTTCAAAATGAGCTCTCACCTGAGAGCAAGCAGAATATGGAGCTGTGGCTTTCTTCCCTGCAAAACTCAGAAGCTTGA

Coding sequence (CDS)

ATGGCTGTTTCTTTTAGCCGTTTGTCATTGTGGTTCTGGACTGGTAAAGAGAAAGAGCCTATTCCAAATGGGTCTCCTTCAAATTCTTCATCTGAGCTCGGTTCCGGTCTGCGAGAACCGGAGAGGCTCAAGCTCAAGAGGGGGCTGGAGTTGGGTTCATCTTCAAAGAAGGTGAAGAACCAGAAATGGGAAAGTAAGAAAGAAACAGCAAGGATTGAGTGGGAGATGGTTGAGTCTGGTGATGAGGCTGATTGGTCCATTGGTTGGTTGGAGCCTCATGGTCCTGGGTTTCAGAATGATGATAGTTTTGCGGTTCTGGTTCCTTCTTATAGCAATCGTTGCAAGGAGGTTGTGGAGGGTTCAAATGTTGAGCTTTTGGCTGCCATCAAGAATCTTCAAAATGAGCTCTCACCTGAGAGCAAGCAGAATATGGAGCTGTGGCTTTCTTCCCTGCAAAACTCAGAAGCTTGA

Protein sequence

MAVSFSRLSLWFWTGKEKEPIPNGSPSNSSSELGSGLREPERLKLKRGLELGSSSKKVKNQKWESKKETARIEWEMVESGDEADWSIGWLEPHGPGFQNDDSFAVLVPSYSNRCKEVVEGSNVELLAAIKNLQNELSPESKQNMELWLSSLQNSEA

Homology

[Close]

BLAST of Sed0002345 vs. NCBI nr
Match: XP_023544309.1 (uncharacterized protein LOC111803923 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 246.5 bits (628), Expect = 1.5e-61
Identity = 131/170 (77.06%), Postives = 142/170 (83.53%), Query Frame = 0


Query: 1   MAVSFSRLSLWFWTGKEKEPIPNGSPSNSSSELGSGLREPERLKLKRGLELGSSSKKVKN 60
           MAVSFSR SLWFW GKEKE + NG+PSNSSSE+G+GLREPE LKLKR ++LGSSSKKVKN
Sbjct: 1   MAVSFSRFSLWFWKGKEKESVANGAPSNSSSEVGTGLREPESLKLKR-VDLGSSSKKVKN 60

Query: 61  QKWESKKETARIEWE--------------MVESGDEADWSIGWLEPHGPGFQNDDSFAVL 120
           QKW SKKET RI+WE              M +S DEADWSIGWLEPHGPGFQ+DDSFAVL
Sbjct: 61  QKWRSKKETTRIDWEYDFLIVPPGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFAVL 120

Query: 121 VPSYSNRCKEVVEGSNVELLAAIKNLQNELSPESKQNMELWL-SSLQNSE 156
           VPSYSNRCKEVVEGSNVELLAAIKNLQ+E SPESK+ MELWL SSLQ SE
Sbjct: 121 VPSYSNRCKEVVEGSNVELLAAIKNLQHEFSPESKKYMELWLSSSLQISE 169

[Close]

BLAST of Sed0002345 vs. NCBI nr
Match: XP_022978826.1 (uncharacterized protein LOC111478669 isoform X1 [Cucurbita maxima])

HSP 1 Score: 243.0 bits (619), Expect = 1.7e-60
Identity = 129/170 (75.88%), Postives = 141/170 (82.94%), Query Frame = 0


Query: 1   MAVSFSRLSLWFWTGKEKEPIPNGSPSNSSSELGSGLREPERLKLKRGLELGSSSKKVKN 60
           MAVSFSR SLWFW GKEKE + NG+PSNSS+E+G+GLREPE LKLKR ++LGS SKKVKN
Sbjct: 1   MAVSFSRFSLWFWKGKEKESVANGAPSNSSTEVGTGLREPESLKLKR-VDLGSFSKKVKN 60

Query: 61  QKWESKKETARIEWE--------------MVESGDEADWSIGWLEPHGPGFQNDDSFAVL 120
           QKW SKKET RI+WE              M +S DEADWSIGWLEPHGPGFQ+DDSFAVL
Sbjct: 61  QKWRSKKETTRIDWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFAVL 120

Query: 121 VPSYSNRCKEVVEGSNVELLAAIKNLQNELSPESKQNMELWL-SSLQNSE 156
           VPSYSNRCKEVVEGSNVELLAAIKNLQ+E SPESK+ MELWL SSLQ SE
Sbjct: 121 VPSYSNRCKEVVEGSNVELLAAIKNLQHEFSPESKKYMELWLSSSLQISE 169

[Close]

BLAST of Sed0002345 vs. NCBI nr
Match: XP_022950521.1 (uncharacterized protein LOC111453604 [Cucurbita moschata])

HSP 1 Score: 243.0 bits (619), Expect = 1.7e-60
Identity = 129/170 (75.88%), Postives = 140/170 (82.35%), Query Frame = 0


Query: 1   MAVSFSRLSLWFWTGKEKEPIPNGSPSNSSSELGSGLREPERLKLKRGLELGSSSKKVKN 60
           MAVSFSR SLWFW GKEKE + NG PSNS SE+G+GLREPE LKLKR ++LGSSSKKVKN
Sbjct: 1   MAVSFSRFSLWFWKGKEKESVANGGPSNSPSEVGTGLREPESLKLKR-VDLGSSSKKVKN 60

Query: 61  QKWESKKETARIEWE--------------MVESGDEADWSIGWLEPHGPGFQNDDSFAVL 120
           QKW SKKET RI+WE              M +S DEADWSIGWLEPHGPGFQ+DDSFAVL
Sbjct: 61  QKWRSKKETTRIDWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFAVL 120

Query: 121 VPSYSNRCKEVVEGSNVELLAAIKNLQNELSPESKQNMELWL-SSLQNSE 156
           VPSYSNRC+EVVEGSNVELLAAIKNLQ+E SPESK+ MELWL SSLQ SE
Sbjct: 121 VPSYSNRCREVVEGSNVELLAAIKNLQHEFSPESKKYMELWLSSSLQISE 169

[Close]

BLAST of Sed0002345 vs. NCBI nr
Match: KAG6604065.1 (hypothetical protein SDJN03_04674, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 242.3 bits (617), Expect = 2.8e-60
Identity = 128/170 (75.29%), Postives = 141/170 (82.94%), Query Frame = 0


Query: 1   MAVSFSRLSLWFWTGKEKEPIPNGSPSNSSSELGSGLREPERLKLKRGLELGSSSKKVKN 60
           MAVSFSR SLWFW GKEKE + NG+PSNS SE+G+GLREPE LKLKR ++LGSSSKKVKN
Sbjct: 1   MAVSFSRFSLWFWKGKEKESVTNGAPSNSPSEVGTGLREPESLKLKR-VDLGSSSKKVKN 60

Query: 61  QKWESKKETARIEWE--------------MVESGDEADWSIGWLEPHGPGFQNDDSFAVL 120
           QKW SKKET RI+WE              M +S DEADWSIGWLEPHGPGFQ+DDSFAVL
Sbjct: 61  QKWRSKKETTRIDWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFAVL 120

Query: 121 VPSYSNRCKEVVEGSNVELLAAIKNLQNELSPESKQNMELWL-SSLQNSE 156
           VPSYSNRC+EVVEGSNVELLAAIKNLQ+E SPE+K+ MELWL SSLQ SE
Sbjct: 121 VPSYSNRCREVVEGSNVELLAAIKNLQHEFSPENKKYMELWLSSSLQISE 169

[Close]

BLAST of Sed0002345 vs. NCBI nr
Match: XP_008440536.1 (PREDICTED: uncharacterized protein LOC103484930 isoform X1 [Cucumis melo])

HSP 1 Score: 237.7 bits (605), Expect = 7.0e-59
Identity = 128/170 (75.29%), Postives = 136/170 (80.00%), Query Frame = 0


Query: 1   MAVSFSRLSLWFWTGKEKEPIPNGSPSNSSSELGSGLREPERLKLKRGLELGSSSKKVKN 60
           MAVS SR SLWFW GKEKE + NGS  NSSSE G+GLREPE LK KR ++L SSSKKV  
Sbjct: 1   MAVSLSRFSLWFWNGKEKETVANGSTPNSSSEFGTGLREPESLKFKR-VDLPSSSKKVNK 60

Query: 61  QKWESKKETARIEWE--------------MVESGDEADWSIGWLEPHGPGFQNDDSFAVL 120
           QKW+SKKET RIEWE              M +SGDEADWSIGWLEPHGPGFQ+DDSFAVL
Sbjct: 61  QKWQSKKET-RIEWEYDFVMVPSGGDDMQMSDSGDEADWSIGWLEPHGPGFQSDDSFAVL 120

Query: 121 VPSYSNRCKEVVEGSNVELLAAIKNLQNELSPESKQNMELWLSSLQNSEA 157
           VPSYSNRCKEVVEGSNVELLAAIK LQNE SPESK+ MELWLSSLQNS A
Sbjct: 121 VPSYSNRCKEVVEGSNVELLAAIKKLQNEFSPESKKYMELWLSSLQNSVA 168

[Close]

BLAST of Sed0002345 vs. ExPASy TrEMBL
Match: A0A6J1IP42 (uncharacterized protein LOC111478669 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478669 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 8.0e-61
Identity = 129/170 (75.88%), Postives = 141/170 (82.94%), Query Frame = 0


Query: 1   MAVSFSRLSLWFWTGKEKEPIPNGSPSNSSSELGSGLREPERLKLKRGLELGSSSKKVKN 60
           MAVSFSR SLWFW GKEKE + NG+PSNSS+E+G+GLREPE LKLKR ++LGS SKKVKN
Sbjct: 1   MAVSFSRFSLWFWKGKEKESVANGAPSNSSTEVGTGLREPESLKLKR-VDLGSFSKKVKN 60

Query: 61  QKWESKKETARIEWE--------------MVESGDEADWSIGWLEPHGPGFQNDDSFAVL 120
           QKW SKKET RI+WE              M +S DEADWSIGWLEPHGPGFQ+DDSFAVL
Sbjct: 61  QKWRSKKETTRIDWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFAVL 120

Query: 121 VPSYSNRCKEVVEGSNVELLAAIKNLQNELSPESKQNMELWL-SSLQNSE 156
           VPSYSNRCKEVVEGSNVELLAAIKNLQ+E SPESK+ MELWL SSLQ SE
Sbjct: 121 VPSYSNRCKEVVEGSNVELLAAIKNLQHEFSPESKKYMELWLSSSLQISE 169

[Close]

BLAST of Sed0002345 vs. ExPASy TrEMBL
Match: A0A6J1GF21 (uncharacterized protein LOC111453604 OS=Cucurbita moschata OX=3662 GN=LOC111453604 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 8.0e-61
Identity = 129/170 (75.88%), Postives = 140/170 (82.35%), Query Frame = 0


Query: 1   MAVSFSRLSLWFWTGKEKEPIPNGSPSNSSSELGSGLREPERLKLKRGLELGSSSKKVKN 60
           MAVSFSR SLWFW GKEKE + NG PSNS SE+G+GLREPE LKLKR ++LGSSSKKVKN
Sbjct: 1   MAVSFSRFSLWFWKGKEKESVANGGPSNSPSEVGTGLREPESLKLKR-VDLGSSSKKVKN 60

Query: 61  QKWESKKETARIEWE--------------MVESGDEADWSIGWLEPHGPGFQNDDSFAVL 120
           QKW SKKET RI+WE              M +S DEADWSIGWLEPHGPGFQ+DDSFAVL
Sbjct: 61  QKWRSKKETTRIDWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFAVL 120

Query: 121 VPSYSNRCKEVVEGSNVELLAAIKNLQNELSPESKQNMELWL-SSLQNSE 156
           VPSYSNRC+EVVEGSNVELLAAIKNLQ+E SPESK+ MELWL SSLQ SE
Sbjct: 121 VPSYSNRCREVVEGSNVELLAAIKNLQHEFSPESKKYMELWLSSSLQISE 169

[Close]

BLAST of Sed0002345 vs. ExPASy TrEMBL
Match: A0A1S3B0X6 (uncharacterized protein LOC103484930 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484930 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 3.4e-59
Identity = 128/170 (75.29%), Postives = 136/170 (80.00%), Query Frame = 0


Query: 1   MAVSFSRLSLWFWTGKEKEPIPNGSPSNSSSELGSGLREPERLKLKRGLELGSSSKKVKN 60
           MAVS SR SLWFW GKEKE + NGS  NSSSE G+GLREPE LK KR ++L SSSKKV  
Sbjct: 1   MAVSLSRFSLWFWNGKEKETVANGSTPNSSSEFGTGLREPESLKFKR-VDLPSSSKKVNK 60

Query: 61  QKWESKKETARIEWE--------------MVESGDEADWSIGWLEPHGPGFQNDDSFAVL 120
           QKW+SKKET RIEWE              M +SGDEADWSIGWLEPHGPGFQ+DDSFAVL
Sbjct: 61  QKWQSKKET-RIEWEYDFVMVPSGGDDMQMSDSGDEADWSIGWLEPHGPGFQSDDSFAVL 120

Query: 121 VPSYSNRCKEVVEGSNVELLAAIKNLQNELSPESKQNMELWLSSLQNSEA 157
           VPSYSNRCKEVVEGSNVELLAAIK LQNE SPESK+ MELWLSSLQNS A
Sbjct: 121 VPSYSNRCKEVVEGSNVELLAAIKKLQNEFSPESKKYMELWLSSLQNSVA 168

[Close]

BLAST of Sed0002345 vs. ExPASy TrEMBL
Match: A0A6J1IUD7 (uncharacterized protein LOC111478669 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478669 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 2.3e-55
Identity = 115/152 (75.66%), Postives = 126/152 (82.89%), Query Frame = 0


Query: 1   MAVSFSRLSLWFWTGKEKEPIPNGSPSNSSSELGSGLREPERLKLKRGLELGSSSKKVKN 60
           MAVSFSR SLWFW GKEKE + NG+PSNSS+E+G+GLREPE LKLKR ++LGS SKKVKN
Sbjct: 1   MAVSFSRFSLWFWKGKEKESVANGAPSNSSTEVGTGLREPESLKLKR-VDLGSFSKKVKN 60

Query: 61  QKWESKKETARIEWE--------------MVESGDEADWSIGWLEPHGPGFQNDDSFAVL 120
           QKW SKKET RI+WE              M +S DEADWSIGWLEPHGPGFQ+DDSFAVL
Sbjct: 61  QKWRSKKETTRIDWEYDFLIVPSGGDDMQMPDSADEADWSIGWLEPHGPGFQSDDSFAVL 120

Query: 121 VPSYSNRCKEVVEGSNVELLAAIKNLQNELSP 139
           VPSYSNRCKEVVEGSNVELLAAIKNLQ+E SP
Sbjct: 121 VPSYSNRCKEVVEGSNVELLAAIKNLQHEFSP 151

[Close]

BLAST of Sed0002345 vs. ExPASy TrEMBL
Match: A0A6J1HGF0 (uncharacterized protein LOC111463276 OS=Cucurbita moschata OX=3662 GN=LOC111463276 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 4.3e-54
Identity = 122/172 (70.93%), Postives = 136/172 (79.07%), Query Frame = 0


Query: 1   MAVSFSRLSLWFWTGKEKEPIPNGSPSNSSSELGSGLREPERLKLKRGLELGSSSKKVKN 60
           MAVSFSR SLW W  KEK+ + NGSPS+SSSE G+GLRE ERLK KRG+ L SS+KKV+ 
Sbjct: 1   MAVSFSRFSLWVWNRKEKKSVANGSPSSSSSEFGNGLRESERLKFKRGVGLPSSAKKVEK 60

Query: 61  QKWESKKETARIEWE----MVESG------------DEADWSIGWLEPHGPGFQNDDSFA 120
           Q+W SKKET RIEWE    MV SG             EADWSIGWLEPHGPGF++DDSFA
Sbjct: 61  QQWGSKKET-RIEWECDYVMVPSGGDGMQMSESDAPGEADWSIGWLEPHGPGFKSDDSFA 120

Query: 121 VLVPSYSNRCKEVVEGSNVELLAAIKNLQNELSPESKQNMELWLSSLQNSEA 157
           VLVPSYSNRCKEVVE SNVELLAAIKNLQ E SPES+++MEL LSSLQNS+A
Sbjct: 121 VLVPSYSNRCKEVVECSNVELLAAIKNLQTEFSPESQKHMELLLSSLQNSKA 171

[Close]

BLAST of Sed0002345 vs. TAIR 10
Match: AT4G38060.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 77.4 bits (189), Expect = 1.1e-14
Identity = 53/123 (43.09%), Postives = 70/123 (56.91%), Query Frame = 0


Query: 38  REPERLKLKRGLELGSSSKKVKNQKWESKKETARIEWEMVESGDEADWSIGWLEPHGPGF 97
           +E E LK    +   +  K+++ + + S       E   V +GD  +WS+GW EPHGP F
Sbjct: 20  KETEALKFPTKIARVNKRKELELESFGSSGS----ESVDVVAGDGPEWSVGWTEPHGPDF 79

Query: 98  QNDD-----SFAVLVPSYSNRCKEVVEGS---NVELLAAIKNLQNELSPESKQNMELWLS 153
           Q+DD      F VLVP Y    + VVEGS   N +LL+A+KNL N L P+ K  ME WLS
Sbjct: 80  QSDDEGNDGGFLVLVPCY----RAVVEGSSNNNNQLLSAVKNLPNGLPPDGKNYMEQWLS 134

[Close]

BLAST of Sed0002345 vs. TAIR 10
Match: AT5G65480.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38060.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 73.2 bits (178), Expect = 2.1e-13
Identity = 64/169 (37.87%), Postives = 83/169 (49.11%), Query Frame = 0


Query: 1   MAVSFSRLSLWFWTG------KEKEPIPNGSPSNSSSELGSGLREPERLKLKRGLELGSS 60
           MAVSF RL  W   G      ++KE IP GS S S S           LK     + GSS
Sbjct: 1   MAVSFPRLPRWLCGGSNTKDREKKESIPKGSSSLSPS-----------LKKTTTSKTGSS 60

Query: 61  SKKVKNQK--W------ESKKETARIEWEMVESGDEADWSIGWLEPHGPGFQNDD----S 120
           S  VK  K  W       S  E  +I   +    D+ +WSIGW+EPHGPGF+ +D     
Sbjct: 61  SSSVKKTKRGWIGRGGSGSGGEEDKIGNVVFPEPDDPEWSIGWVEPHGPGFKAEDDDCGG 120

Query: 121 FAVLVPSYSNRCKEVVEGSNVELLAAIKNLQNELSPESKQNMELWLSSL 152
           F VLVP Y    K+V++GS  ++        +  +P+ K NME WLSS+
Sbjct: 121 FVVLVPLY----KKVMDGSGNQI---PNGFFSPAAPDGK-NMEQWLSSM 150

[Close]

BLAST of Sed0002345 vs. TAIR 10
Match: AT4G38060.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65480.1); Has 63 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 61.6 bits (148), Expect = 6.4e-10
Identity = 44/109 (40.37%), Postives = 60/109 (55.05%), Query Frame = 0


Query: 38  REPERLKLKRGLELGSSSKKVKNQKWESKKETARIEWEMVESGDEADWSIGWLEPHGPGF 97
           +E E LK    +   +  K+++ + + S       E   V +GD  +WS+GW EPHGP F
Sbjct: 20  KETEALKFPTKIARVNKRKELELESFGSSGS----ESVDVVAGDGPEWSVGWTEPHGPDF 79

Query: 98  QNDD-----SFAVLVPSYSNRCKEVVEGS---NVELLAAIKNLQNELSP 139
           Q+DD      F VLVP Y    + VVEGS   N +LL+A+KNL N L P
Sbjct: 80  QSDDEGNDGGFLVLVPCY----RAVVEGSSNNNNQLLSAVKNLPNGLPP 120

The following BLAST results are available for this feature:

BLAST of Sed0002345 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023544309.1	1.5e-61	77.06	uncharacterized protein LOC111803923 [Cucurbita pepo subsp. pepo]	[more]
XP_022978826.1	1.7e-60	75.88	uncharacterized protein LOC111478669 isoform X1 [Cucurbita maxima]	[more]
XP_022950521.1	1.7e-60	75.88	uncharacterized protein LOC111453604 [Cucurbita moschata]	[more]
KAG6604065.1	2.8e-60	75.29	hypothetical protein SDJN03_04674, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_008440536.1	7.0e-59	75.29	PREDICTED: uncharacterized protein LOC103484930 isoform X1 [Cucumis melo]	[more]

BLAST of Sed0002345 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0002345 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IP42	8.0e-61	75.88	uncharacterized protein LOC111478669 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GF21	8.0e-61	75.88	uncharacterized protein LOC111453604 OS=Cucurbita moschata OX=3662 GN=LOC1114536...	[more]
A0A1S3B0X6	3.4e-59	75.29	uncharacterized protein LOC103484930 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1IUD7	2.3e-55	75.66	uncharacterized protein LOC111478669 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HGF0	4.3e-54	70.93	uncharacterized protein LOC111463276 OS=Cucurbita moschata OX=3662 GN=LOC1114632...	[more]

BLAST of Sed0002345 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38060.2	1.1e-14	43.09	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G65480.1	2.1e-13	37.87	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G38060.1	6.4e-10	40.37	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 115..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..68
None	No IPR available	PANTHER	PTHR34464:SF8	BNAC03G61080D PROTEIN	coord: 1..153
None	No IPR available	PANTHER	PTHR34464	OS09G0376300 PROTEIN	coord: 1..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002345.1	Sed0002345.1	mRNA