Sed0002324 (gene) Chayote v1

Overview


Name	Sed0002324
Type	gene
Organism	Sechium edule (Chayote v1)
Description	B-like cyclin
Location	LG13: 23032420 .. 23036753 (+)
RNA-Seq Expression	Sed0002324
Synteny	Sed0002324

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTCTGCAAAACCCAAAAATTCTCTCTCTAAAATCCCCCCAAACCAAAAAGATTTCTAAAATCTCCCACGTTTTTAGAAAACCCAGATCGGCTTTTTTTTTTTTTAAAAAAAAAACCTCTGTTTTATCCGCCCTTCAATTTCACCCTGTTCTTGAAGATTCTGGGTTTGGAATCATCGGATCCCCCTTTGAATGAGAAAAAAAAGAAAAGAAAAATGGATGAGATTGGGGGGTGTTTGGACGATGAGATAGTGGGAAAACGCGGATTAAGTTACATCGGGAAGGGAAGTCCAGCAGAGGATGAGTTTGTGGATACGTTACTTGAAAAAGAGACGACTTTTGGGTTTCGAAATGATAAATGTTTGGCGTTTGGGAACTGGGTTAAGTGTGTCCGTTTGGATGCAATTGCATGGATTCTCAAAGTTAGTTTTTTTTTTTTTTTTTTTTTTTAATTTTATTTATTTTTGGATTGAATTTGACGATTGTTGTAATGTTACAGACTAGAGCTGCGTTTGGATTTGGTTTCCAGACGGCTTATCTTTCGATGATTTACTTTGATCGGTTCCTTTCTCGAAGGGCAATCACTGTAAGCTTTCAATTTCCCATTTCCTCTGTCTAAAACCCCATAATTGGAAGAATCCGATCAATCCAACTTAATTTGATGGATAAATTGGATTATCCACTTATTATGGTTGGATTGAAAGGGGAGAAATTAAATTTTTATAGGTTGAATTGTTGGTAAGTTAATTTGAAATTAATTTGAATAATCCAAATTTATTATTATTTTTTTTAATTTATAAAGGAATTATACATATTTTTATTTCATTTAATTCTATGATTGTTTTTATTTTATTTTTTATTCTCCAATTTTTTTTAAAATAATTTTTAAAGATTTTTTATTTTTTTAATTTCTATTGCATCAATTGTGGATTGACATTTGAACTTATGACCTTTGTGTCAATAATCCTACTTTCTTGATGACATTTTACTTTTTGTTTATTATTAATAAAAAAAAATTATGTTGTACCAAATGGTGTCCAATATTTATACAAGCAGAGTCCTTCTATCTAGGGGTGTTCACATTTTATCCGAAAACCGAACCGACCGACCAAAACCGACCGAATCAAGGTCGGTCGGAGTCGGTTAAATTAAATAATTAACCGACGGTCGGTCGGTTGGAGAATTTTGTAAAAAAATTAAGTTATAAGAGTAAATCCATGGTTTTCAAATGAAAAATATTTAGATTTTTTTAAAAAAACCTTAACCGACCGTCGGTCGGAATTCTCGATTCAAATTTTTTTTCGGTTTTTATTATTAGAAAACCGATATGTCGTTTATCAATGTCGGTTTTCTCCAAAAAACGACCCCGACCGACCGATGAACACCCCTACTTCTATCTATTCGGGTGTAGGAGAATATTTCTCATTTTTAAATCATTAGAATATATTTTTCAAAATATAAAAAATTATGTAAATAATAAATAAATACTCGACTAAAGAAAAAAAAGTAACAACTCAACCCGTAAATATGTGTTGGATCGGATTGAGTTGTTCTTGTTATTGGATTGAATTGTTTTAACATAACACATAGTGTTGAATGGATCGGAAAAAAATCACTTAACTCAACTAGTATGGGTATATATGAGTTGGGTTAAGAAGATTTTTTTGGGTTGACCCAAATTTTCGGATCAATGAATCCACCATATTCTCAATTGGATTGGTCCGGTTATTCGAGTTGTTGTGTTTTTGCAACACCCCTAATCTGACTTTGGTCCATTAATCCAAAACTCCATTGGTGCAGAATGAGAAGCTTTGGGCCATGAGGCTGCTGGCTGTGGCTTGTCTTTCCATAGCAGCAAAAATGGAAGAATTGAAGGTTCCATTACTATCAGAATTTCCAGTGGAAGATTTCAACTTTGAAAGCAAAGTAATCCAAAGAATGGAGCTTTTAGTGTTGAACACATTAGATTGGAAGATGGGCTCAACAACTCCTTTCACTTTCATTCCTTATTTCATATCTAAATTAACCACTCAATCTCCACCAACTACTAAAGTTTCACAGATTGTTGAACTCATTTGGGTCTTAATTAGAGGTAATTTTATCCAACTCATTTCTCTCAGTTTGTTCTTTGATAATCATTTGGTTTTTTATTTATTTTTTTTCAAATTTTTGTTTGGTTTAAAAAAAATGTAAGTAAGTTGTAAATATCTAAACAACAAAAACATCTAATGTTGTAGGCTTAGTTTTAAAAAATTAAAAACTAAAAAAAAAAAAGGTTATGGATAAAGATTTTAGTTTCTTGTTCTTGATATTTAACTCACAACAACTACTTGAGTACGAGTTTTTTTTACTTGAATATCTACGAAAGGAGTTTTCAAAAGCATATTTTGTTTTTATAACTTGATTAACATTCACATTTTTTTTATGAAGTTAAAGTAAAGTTTAAATTTCATAAACAAAATAACAAATAATTAAAGTGTCGTTTGATAACCATTTTATTTAAATAAAACATCAAATAATTAAAGTCTCGTTTGATAACAATTTTATTTTATTTTTTTTAATTATTGAAATTCAAGTCTACAATAAGTACCTGCTATATATTTTCTTACTTGTATATCTACCACGCATCTATATTTGTGGAAACCAAACTAAAATTTGGAAACATAAAAATAGCTTTTAAAAATTTGTTTTTGTTTTTGAAAGTTGGTTATCATTTACATACTTTCTTAAAAAAAAGATAGATACATACTAGGAAAAGTAGAATACATCGTTAAAAATTTAAGTAAAAATATACTTAAATTTCAAAAACAAAAAATAAAAAATAAAATAGCTATTAAATAGTGCTTAAAATACATTCTTGATTTTGTTTATAACAACATTCAAATCTTGTATGCAGAAAAAAGTACACAAAATCATAGGCCTTCTGTTGTAGCAGCAGCCACAGCCATTTTAGCAGCAATGGGTGACAGATTACCAAGAAAAGCCTTGGAAATGAAAATGAGTTCCATTTCTCAATGTAGATATCTTGAAGTTGTAAGTTTCAACAACAAATTTGAATCCCATTTTTTTTTTAATTTTCTTCTTAATCAGATTTGGTTGAAACCATTGTTTTTGTTCACAGGAAGATGTGGTTTCATGTTACAATCTGATGCAAGAATGTAGAGAAGAAGAAAAACAAGATTCTTCAGTGATATCATCCATTGCTTCAAAAAGAAAGCGCCTAAATTTCAGTAACTGTGATGAAGGAAAAGAGAGAAAAAGATGATGAATGTTTTTATTTTATTTTTTTGGTTTGGGGTTCTTTAATTTGTTCTCCTTGTCACAAATTGACTTGTGATGATAATTTGGGGGGTTTTTATGATTCAATCATTGCTTGATTTGTTGGTTTATTGATGAAAGAACAGAGAAATTTAAAGGAAAAGGCTGCATTTAGAAATAGTAAAAGTGAAAGGTTGAAGAAGAAAAAGAAAGCTGATTCTGATATTGATTAGGCCAAAGTCATAAGGGGAAGGAAGAGTGCTTGAAAGAAAGCTGCTGCTGCTTATAGGACAAGCTATACCCTCATACTTTGATGGTTTACTCTTTTGTTTATTTATTTAGTTACTATTTTTAAATAGGGGGTGTTTGGATGGAGGGGTTTGGAGAAGAGGAGAAGTAAAATAGAGGGGTTTGGATTGGTTTGGCGGGGTTCGGAAAAGTTGAAAGCTTGTTTGGTATGAAGAGTTAGGAGTAGTTGTGACAGGTACCAGTCGCTTATATGAGAGGTAATGAGTTATTGTATGAAATAGTCATTATTTGGTATAAGAAATTTTTGAGTGGTTATGAGTGCTTTTTTAGGTTACTTTTGTGGAACGTGTGGCTAGATTAACCGCTGCTCAACTCCTCGCTCCAAACAGCTCTATTTAGGGTTGTGTTTTGGGTGTTTATGCAAAGCCTTGGTTTTTCATGGGATGCTTTTTTTGGTGCCTTTGAAAAGGCTGTTACAAAGTTGAGAAGTGACAGTAAGAGGCTTTGGGGGGTGTGGGGGAAATGAAAGTAAGAGTTGAGGAGTAGTGATGGAGAAGGCTTTGTTTTATAGGGATTTGATGTATCTCTGCTTCATTCTAGTCTTCAAAAATGTTTCTTTGTAAAAGGTGAAAGTGATGGGATATGTTTGAATGTTTGGGGCAAGCCTTTCCAGGTGGGGCCAAGCTCTTTTCCACATTATAAAAAAAAAAAAGCTTCAACTTGGTTTTTTTTCCCCCTAGACCTTGTTTGTTGAACTTGAACCAGAACCCAATTCTTCTTGTGTAATATGGTTGAGCAAACTTCAATGAAATTTGATTTTTGTGCA

mRNA sequence

TTTCTCTGCAAAACCCAAAAATTCTCTCTCTAAAATCCCCCCAAACCAAAAAGATTTCTAAAATCTCCCACGTTTTTAGAAAACCCAGATCGGCTTTTTTTTTTTTTAAAAAAAAAACCTCTGTTTTATCCGCCCTTCAATTTCACCCTGTTCTTGAAGATTCTGGGTTTGGAATCATCGGATCCCCCTTTGAATGAGAAAAAAAAGAAAAGAAAAATGGATGAGATTGGGGGGTGTTTGGACGATGAGATAGTGGGAAAACGCGGATTAAGTTACATCGGGAAGGGAAGTCCAGCAGAGGATGAGTTTGTGGATACGTTACTTGAAAAAGAGACGACTTTTGGGTTTCGAAATGATAAATGTTTGGCGTTTGGGAACTGGGTTAAGTGTGTCCGTTTGGATGCAATTGCATGGATTCTCAAAACTAGAGCTGCGTTTGGATTTGGTTTCCAGACGGCTTATCTTTCGATGATTTACTTTGATCGGTTCCTTTCTCGAAGGGCAATCACTAATGAGAAGCTTTGGGCCATGAGGCTGCTGGCTGTGGCTTGTCTTTCCATAGCAGCAAAAATGGAAGAATTGAAGGTTCCATTACTATCAGAATTTCCAGTGGAAGATTTCAACTTTGAAAGCAAAGTAATCCAAAGAATGGAGCTTTTAGTGTTGAACACATTAGATTGGAAGATGGGCTCAACAACTCCTTTCACTTTCATTCCTTATTTCATATCTAAATTAACCACTCAATCTCCACCAACTACTAAAGTTTCACAGATTGTTGAACTCATTTGGGTCTTAATTAGAGAAAAAAGTACACAAAATCATAGGCCTTCTGTTGTAGCAGCAGCCACAGCCATTTTAGCAGCAATGGGTGACAGATTACCAAGAAAAGCCTTGGAAATGAAAATGAGTTCCATTTCTCAATGTAGATATCTTGAAGTTGAAGATGTGGTTTCATGTTACAATCTGATGCAAGAATGTAGAGAAGAAGAAAAACAAGATTCTTCAGTGATATCATCCATTGCTTCAAAAAGAAAGCGCCTAAATTTCAGTAACTGTGATGAAGGAAAAGAGAGAAAAAGATGATGAATGTTTTTATTTTATTTTTTTGGTTTGGGGTTCTTTAATTTGTTCTCCTTGTCACAAATTGACTTGTGATGATAATTTGGGGGGTTTTTATGATTCAATCATTGCTTGATTTGTTGGTTTATTGATGAAAGAACAGAGAAATTTAAAGGAAAAGGCTGCATTTAGAAATAGTAAAAGTGAAAGGTTGAAGAAGAAAAAGAAAGCTGATTCTGATATTGATTAGGCCAAAGTCATAAGGGGAAGGAAGAGTGCTTGAAAGAAAGCTGCTGCTGCTTATAGGACAAGCTATACCCTCATACTTTGATGGTTTACTCTTTTGTTTATTTATTTAGTTACTATTTTTAAATAGGGGGTGTTTGGATGGAGGGGTTTGGAGAAGAGGAGAAGTAAAATAGAGGGGTTTGGATTGGTTTGGCGGGGTTCGGAAAAGTTGAAAGCTTGTTTGGTATGAAGAGTTAGGAGTAGTTGTGACAGGTACCAGTCGCTTATATGAGAGGTAATGAGTTATTGTATGAAATAGTCATTATTTGGTATAAGAAATTTTTGAGTGGTTATGAGTGCTTTTTTAGGTTACTTTTGTGGAACGTGTGGCTAGATTAACCGCTGCTCAACTCCTCGCTCCAAACAGCTCTATTTAGGGTTGTGTTTTGGGTGTTTATGCAAAGCCTTGGTTTTTCATGGGATGCTTTTTTTGGTGCCTTTGAAAAGGCTGTTACAAAGTTGAGAAGTGACAGTAAGAGGCTTTGGGGGGTGTGGGGGAAATGAAAGTAAGAGTTGAGGAGTAGTGATGGAGAAGGCTTTGTTTTATAGGGATTTGATGTATCTCTGCTTCATTCTAGTCTTCAAAAATGTTTCTTTGTAAAAGGTGAAAGTGATGGGATATGTTTGAATGTTTGGGGCAAGCCTTTCCAGGTGGGGCCAAGCTCTTTTCCACATTATAAAAAAAAAAAAGCTTCAACTTGGTTTTTTTTCCCCCTAGACCTTGTTTGTTGAACTTGAACCAGAACCCAATTCTTCTTGTGTAATATGGTTGAGCAAACTTCAATGAAATTTGATTTTTGTGCA

Coding sequence (CDS)

ATGGATGAGATTGGGGGGTGTTTGGACGATGAGATAGTGGGAAAACGCGGATTAAGTTACATCGGGAAGGGAAGTCCAGCAGAGGATGAGTTTGTGGATACGTTACTTGAAAAAGAGACGACTTTTGGGTTTCGAAATGATAAATGTTTGGCGTTTGGGAACTGGGTTAAGTGTGTCCGTTTGGATGCAATTGCATGGATTCTCAAAACTAGAGCTGCGTTTGGATTTGGTTTCCAGACGGCTTATCTTTCGATGATTTACTTTGATCGGTTCCTTTCTCGAAGGGCAATCACTAATGAGAAGCTTTGGGCCATGAGGCTGCTGGCTGTGGCTTGTCTTTCCATAGCAGCAAAAATGGAAGAATTGAAGGTTCCATTACTATCAGAATTTCCAGTGGAAGATTTCAACTTTGAAAGCAAAGTAATCCAAAGAATGGAGCTTTTAGTGTTGAACACATTAGATTGGAAGATGGGCTCAACAACTCCTTTCACTTTCATTCCTTATTTCATATCTAAATTAACCACTCAATCTCCACCAACTACTAAAGTTTCACAGATTGTTGAACTCATTTGGGTCTTAATTAGAGAAAAAAGTACACAAAATCATAGGCCTTCTGTTGTAGCAGCAGCCACAGCCATTTTAGCAGCAATGGGTGACAGATTACCAAGAAAAGCCTTGGAAATGAAAATGAGTTCCATTTCTCAATGTAGATATCTTGAAGTTGAAGATGTGGTTTCATGTTACAATCTGATGCAAGAATGTAGAGAAGAAGAAAAACAAGATTCTTCAGTGATATCATCCATTGCTTCAAAAAGAAAGCGCCTAAATTTCAGTAACTGTGATGAAGGAAAAGAGAGAAAAAGATGA

Protein sequence

MDEIGGCLDDEIVGKRGLSYIGKGSPAEDEFVDTLLEKETTFGFRNDKCLAFGNWVKCVRLDAIAWILKTRAAFGFGFQTAYLSMIYFDRFLSRRAITNEKLWAMRLLAVACLSIAAKMEELKVPLLSEFPVEDFNFESKVIQRMELLVLNTLDWKMGSTTPFTFIPYFISKLTTQSPPTTKVSQIVELIWVLIREKSTQNHRPSVVAAATAILAAMGDRLPRKALEMKMSSISQCRYLEVEDVVSCYNLMQECREEEKQDSSVISSIASKRKRLNFSNCDEGKERKR

Homology

[Close]

BLAST of Sed0002324 vs. NCBI nr
Match: XP_022940806.1 (cyclin-D5-2-like [Cucurbita moschata] >KAG6608427.1 Cyclin-D5-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037764.1 Cyclin-D5-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 439.1 bits (1128), Expect = 2.9e-119
Identity = 230/299 (76.92%), Postives = 254/299 (84.95%), Query Frame = 0


Query: 8   LDDEIVGKRGLSYIGKG-SPAEDEFVDTLLEKETTFGFRNDKCLAFGNWVKCVRLDAIAW 67
           +DDEIV +     IG G SPAED++VDTLL KE +FGFRNDK L FGNWVKC RL+AIAW
Sbjct: 1   MDDEIVDEHSFIDIGNGSSPAEDDYVDTLLAKEMSFGFRNDKSLVFGNWVKCARLEAIAW 60

Query: 68  ILKTRAAFGFGFQTAYLSMIYFDRFLSRRAITNEKLWAMRLLAVACLSIAAKMEELKVPL 127
           ILKTRA FGFGFQTAYLS++YFDRFLSRRAITNEK+WA+RLLAVACLS+AAKMEELKVP 
Sbjct: 61  ILKTRAVFGFGFQTAYLSIMYFDRFLSRRAITNEKVWAVRLLAVACLSLAAKMEELKVPA 120

Query: 128 LSEFPVEDFNFESKVIQRMELLVLNTLDWKMGSTTPFTFIPYFISKLTTQSPPTTKVSQI 187
           LSEFPVEDFNFESKVIQRMELLVLNTL+WKMGSTTPF+FIPYFISKL+ +SPP+ KVSQI
Sbjct: 121 LSEFPVEDFNFESKVIQRMELLVLNTLEWKMGSTTPFSFIPYFISKLSIESPPSNKVSQI 180

Query: 188 VELIWVLIREKSTQNHRPSVVAAATAILAAMGDRLPRKALEMKMSSISQCRYLEVEDVVS 247
           VELIWVLIRE+ST+NHRPSVVAAATAILAAM DRL RKALEMKM++ISQCRYLE+EDVVS
Sbjct: 181 VELIWVLIRERSTENHRPSVVAAATAILAAMDDRLTRKALEMKMNTISQCRYLEIEDVVS 240

Query: 248 CYNLMQE-----CREEEK------------------QDSSVISSIASKRKRLNFSNCDE 283
           CYNLMQE     CREE +                   +SSV S+IASKRKRLNFSNCDE
Sbjct: 241 CYNLMQELRLEKCREEAECLKSPDLSPTQMKSMDCSSNSSVTSAIASKRKRLNFSNCDE 299

[Close]

BLAST of Sed0002324 vs. NCBI nr
Match: XP_023523904.1 (cyclin-D5-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 439.1 bits (1128), Expect = 2.9e-119
Identity = 230/299 (76.92%), Postives = 254/299 (84.95%), Query Frame = 0


Query: 8   LDDEIVGKRGLSYIGKG-SPAEDEFVDTLLEKETTFGFRNDKCLAFGNWVKCVRLDAIAW 67
           +DDEIV +     IG G SPAED++VDTLL KE +FGFRNDK L FGNWVKC RL+AIAW
Sbjct: 1   MDDEIVDEHSFIDIGNGSSPAEDDYVDTLLAKEMSFGFRNDKSLVFGNWVKCARLEAIAW 60

Query: 68  ILKTRAAFGFGFQTAYLSMIYFDRFLSRRAITNEKLWAMRLLAVACLSIAAKMEELKVPL 127
           ILKTRA FGFGFQTAYLS++YFDRFLSRRAITNEK+WA+RLLAVACLS+AAKMEELKVP 
Sbjct: 61  ILKTRAVFGFGFQTAYLSIMYFDRFLSRRAITNEKVWAVRLLAVACLSLAAKMEELKVPA 120

Query: 128 LSEFPVEDFNFESKVIQRMELLVLNTLDWKMGSTTPFTFIPYFISKLTTQSPPTTKVSQI 187
           LSEFPVEDFNFESKVIQRMELLVLNTL+WKMGSTTPF+FIPYFISKL+ +SPP+ KVSQI
Sbjct: 121 LSEFPVEDFNFESKVIQRMELLVLNTLEWKMGSTTPFSFIPYFISKLSIESPPSNKVSQI 180

Query: 188 VELIWVLIREKSTQNHRPSVVAAATAILAAMGDRLPRKALEMKMSSISQCRYLEVEDVVS 247
           VELIWVLIRE+ST+NHRPSVVAAATAILAAM DRL RKALEMKM++ISQCRYLE+EDVVS
Sbjct: 181 VELIWVLIRERSTENHRPSVVAAATAILAAMDDRLTRKALEMKMNTISQCRYLEIEDVVS 240

Query: 248 CYNLMQE-----CREEEK------------------QDSSVISSIASKRKRLNFSNCDE 283
           CYNLMQE     CREE +                   +SSV S+IASKRKRLNFSNCDE
Sbjct: 241 CYNLMQELRLEKCREEAECLKSPDLSPTQMKSMDCSSNSSVTSAIASKRKRLNFSNCDE 299

[Close]

BLAST of Sed0002324 vs. NCBI nr
Match: XP_022981329.1 (cyclin-D5-2-like [Cucurbita maxima])

HSP 1 Score: 436.8 bits (1122), Expect = 1.4e-118
Identity = 229/299 (76.59%), Postives = 253/299 (84.62%), Query Frame = 0


Query: 8   LDDEIVGKRGLSYIGKG-SPAEDEFVDTLLEKETTFGFRNDKCLAFGNWVKCVRLDAIAW 67
           +DDEIV +     IG G SPAED++VDTLL KE +FGFRNDK L FGNWVKC RL+AIAW
Sbjct: 1   MDDEIVDEHSFIDIGNGSSPAEDDYVDTLLAKEMSFGFRNDKSLVFGNWVKCARLEAIAW 60

Query: 68  ILKTRAAFGFGFQTAYLSMIYFDRFLSRRAITNEKLWAMRLLAVACLSIAAKMEELKVPL 127
           ILKTRA FGFGFQTAYLS++Y DRFLSRRAITNEK+WA+RLLAVACLS+AAKMEELKVP 
Sbjct: 61  ILKTRAVFGFGFQTAYLSIMYLDRFLSRRAITNEKVWAVRLLAVACLSLAAKMEELKVPA 120

Query: 128 LSEFPVEDFNFESKVIQRMELLVLNTLDWKMGSTTPFTFIPYFISKLTTQSPPTTKVSQI 187
           LSEFPVEDFNFESKVIQRMELLVLNTL+WKMGSTTPF+FIPYFISKL+ +SPP+ KVSQI
Sbjct: 121 LSEFPVEDFNFESKVIQRMELLVLNTLEWKMGSTTPFSFIPYFISKLSIESPPSNKVSQI 180

Query: 188 VELIWVLIREKSTQNHRPSVVAAATAILAAMGDRLPRKALEMKMSSISQCRYLEVEDVVS 247
           VELIWVLIRE+ST+NHRPSVVAAATAILAAM DRL RKALEMKM++ISQCRYLE+EDVVS
Sbjct: 181 VELIWVLIRERSTENHRPSVVAAATAILAAMDDRLTRKALEMKMNTISQCRYLEIEDVVS 240

Query: 248 CYNLMQE-----CREEEK------------------QDSSVISSIASKRKRLNFSNCDE 283
           CYNLMQE     CREE +                   +SSV S+IASKRKRLNFSNCDE
Sbjct: 241 CYNLMQELRLEKCREEAECLKSPDLSPTQMKSMDCSSNSSVTSAIASKRKRLNFSNCDE 299

[Close]

BLAST of Sed0002324 vs. NCBI nr
Match: XP_038899665.1 (cyclin-D5-2-like isoform X1 [Benincasa hispida])

HSP 1 Score: 430.6 bits (1106), Expect = 1.0e-116
Identity = 228/305 (74.75%), Postives = 251/305 (82.30%), Query Frame = 0


Query: 1   MDEIGGCLDDEIVGKRGLSYIGKGSPAEDEFVDTLLEKETTFGFRNDKCLAFGNWVKCVR 60
           MDEIG  LD+E V +     IG  SPAED++VDTLL KE +FGFR DK L FGNWVKC R
Sbjct: 1   MDEIGASLDEETVDEHTFINIGNRSPAEDDYVDTLLVKEKSFGFRKDKSLVFGNWVKCAR 60

Query: 61  LDAIAWILKTRAAFGFGFQTAYLSMIYFDRFLSRRAITNEKLWAMRLLAVACLSIAAKME 120
           LDAIAWILKTR  FGFG QTAYLSMIYFDRFLSRRAITNEKLWA+RLLAVACLS+AAKME
Sbjct: 61  LDAIAWILKTRNVFGFGCQTAYLSMIYFDRFLSRRAITNEKLWAIRLLAVACLSLAAKME 120

Query: 121 ELKVPLLSEFPVEDFNFESKVIQRMELLVLNTLDWKMGSTTPFTFIPYFISKLTTQSPPT 180
           ELKVP LSE+PV+DFNFESKVIQRMELLVLNTL+WKM STTPF+FIPYFISKL+ +SPP+
Sbjct: 121 ELKVPALSEYPVDDFNFESKVIQRMELLVLNTLEWKMSSTTPFSFIPYFISKLSIESPPS 180

Query: 181 TKVSQIVELIWVLIREKSTQNHRPSVVAAATAILAAMGDRLPRKALEMKMSSISQCRYLE 240
            KVSQIVELIWV+IRE ST+NHRPS VAAATAILAAM DRL RKALE+KM+SISQCRYLE
Sbjct: 181 NKVSQIVELIWVMIRETSTENHRPSEVAAATAILAAMDDRLTRKALELKMNSISQCRYLE 240

Query: 241 VEDVVSCYNLMQE-----CREEEK------------------QDSSVISSIASKRKRLNF 283
           VE+VVSCYNLMQE     CREE +                  ++SSV S+IASKRKRLNF
Sbjct: 241 VEEVVSCYNLMQELRLEKCREEAECLKSPDLSPTQMKSMDCSENSSVTSTIASKRKRLNF 300

[Close]

BLAST of Sed0002324 vs. NCBI nr
Match: XP_004141404.1 (cyclin-D5-2 isoform X1 [Cucumis sativus])

HSP 1 Score: 429.9 bits (1104), Expect = 1.8e-116
Identity = 227/306 (74.18%), Postives = 252/306 (82.35%), Query Frame = 0


Query: 1   MDEIGGCLDDEIVGKRGLSYIGKGSPA-EDEFVDTLLEKETTFGFRNDKCLAFGNWVKCV 60
           MD++G CLD+EIV +     I   SPA ED++VDTLL KET+FGFR DK L FGNW+KC 
Sbjct: 1   MDDVGVCLDEEIVDEHTFIDIANPSPAEEDDYVDTLLVKETSFGFRKDKSLMFGNWMKCA 60

Query: 61  RLDAIAWILKTRAAFGFGFQTAYLSMIYFDRFLSRRAITNEKLWAMRLLAVACLSIAAKM 120
           RLDAIAWILKTR  FGFG QTAYLSMIYFDRFLSRRAITNEKLWA+RLLAVACLS+A+KM
Sbjct: 61  RLDAIAWILKTRNVFGFGCQTAYLSMIYFDRFLSRRAITNEKLWAIRLLAVACLSLASKM 120

Query: 121 EELKVPLLSEFPVEDFNFESKVIQRMELLVLNTLDWKMGSTTPFTFIPYFISKLTTQSPP 180
           EELKVP LSEFPV+DFNFESKVIQRMELLVLNTL+WKMGSTTPF+FIPYFISKL+ +SPP
Sbjct: 121 EELKVPALSEFPVDDFNFESKVIQRMELLVLNTLEWKMGSTTPFSFIPYFISKLSIESPP 180

Query: 181 TTKVSQIVELIWVLIREKSTQNHRPSVVAAATAILAAMGDRLPRKALEMKMSSISQCRYL 240
           + KVSQIVELIWV+IRE STQNHRPSVVAAATAILA M DRL RKAL++KM SISQCRYL
Sbjct: 181 SNKVSQIVELIWVMIRETSTQNHRPSVVAAATAILATMDDRLTRKALQLKMKSISQCRYL 240

Query: 241 EVEDVVSCYNLMQE-----CREEE------------------KQDSSVISSIASKRKRLN 283
           EVE+V+SCYNLMQE     CREE                    ++SSV SS+ASKRKRLN
Sbjct: 241 EVEEVISCYNLMQELRLEKCREEADCLKSPDLSPTQMKSMDCSENSSVTSSLASKRKRLN 300

[Close]

BLAST of Sed0002324 vs. ExPASy Swiss-Prot
Match: Q2QMW1 (Cyclin-D5-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD5-2 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 6.2e-40
Identity = 107/277 (38.63%), Postives = 154/277 (55.60%), Query Frame = 0


Query: 6   GCLDDEIVGKRGLSY----IGKGSPAEDEFVDTLLEKETTFGFRNDKCL----------- 65
           G +DD+  G   L Y           E+E+V+ ++ KE +F   +   L           
Sbjct: 29  GVVDDDDDGDVFLFYNAVAAADDEEEEEEYVEQMVSKEASFCCSSSSSLFDAAAGDGYGD 88

Query: 66  --AFGNWVKCVRLDAIAWILKTRAAFGFGFQTAYLSMIYFDRFLSRRAITNEKL-WAMRL 125
               G+W +  RL A+ WIL+TR  FGFG +TAYL++ YFDRF  RR +  E + WA RL
Sbjct: 89  GDGDGDWFRQARLAAVKWILETRGYFGFGHRTAYLAIAYFDRFCLRRRVDREAMPWAARL 148

Query: 126 LAVACLSIAAKMEELKVPLLSEFPVEDFN-FESKVIQRMELLVLNTLDWKMGSTTPFTFI 185
           L++AC+S+AAKMEE + P LSEF       F S  I+RMELLVL+TL W+MG+ TPF F+
Sbjct: 149 LSIACVSVAAKMEEYQSPALSEFDAGGGRVFCSDSIRRMELLVLSTLGWRMGAVTPFDFL 208

Query: 186 PYFISKLTTQ-----------SPPTTKVS-QIVELIWVLIREKSTQNHRPSVVAAATAIL 245
           P F S+L              +    +V+   V  I+      S  ++RPS VAAA  + 
Sbjct: 209 PCFSSRLHRHHHGGAGAAGHGAAAAARVALNAVGFIFATAEAGSVLDYRPSTVAAAAILA 268

Query: 246 AAMGDRLPRKALEMKMSSISQCRYLEVEDVVSCYNLM 252
           A+ G  L ++ALE KMS++S    ++ E+V +CY++M
Sbjct: 269 ASYGAPLTKEALESKMSNLSPSCLIDKENVHACYSMM 305

[Close]

BLAST of Sed0002324 vs. ExPASy Swiss-Prot
Match: Q0DQA9 (Cyclin-D5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD5-1 PE=2 SV=2)

HSP 1 Score: 163.3 bits (412), Expect = 4.0e-39
Identity = 115/311 (36.98%), Postives = 159/311 (51.13%), Query Frame = 0


Query: 5   GGCLDDEIVGKRGLSYIGKGSPAED--------EFVDTLLEKETTF-------------- 64
           GGC   +  G+  L  +   + A D        E++D L+ KE++F              
Sbjct: 31  GGCFAGD--GRADLLLVYNAAAAADDEDEEEVEEYMDHLVSKESSFCSSSSSTSSSSCCF 90

Query: 65  ---GFRNDKCLAFGNWVKCVRLDAIAWILKTRAAFGFGFQTAYLSMIYFDRFLSRRAITN 124
              G  +    A  +W    R   + WIL+TR  FGF  +TAYL++ YFDRF  RR I  
Sbjct: 91  SDAGGESAAAAAPMDWFALARRATVKWILETRGCFGFCHRTAYLAIAYFDRFCLRRCIDR 150

Query: 125 EKL-WAMRLLAVACLSIAAKMEELKVPLLSEFPV----EDFNFESKVIQRMELLVLNTLD 184
             + WA RLLAVAC+S+AAKMEE + P LSEF      + + F    I+RMELLVL+TLD
Sbjct: 151 SVMPWAARLLAVACVSLAAKMEEYRAPALSEFRAGVGDDGYEFSCVCIRRMELLVLSTLD 210

Query: 185 WKMGSTTPFTFIPYFISKLTTQSPPTTKVSQIVELIWVLIREKSTQNHRPSVVAAATAIL 244
           W+M + TPF ++P   S+L               LI+      S  +HRPS VAAA A+L
Sbjct: 211 WRMAAVTPFDYLPCLSSRLRRHVGGGGGAGASAALIFSAAEAASVLDHRPSTVAAA-AVL 270

Query: 245 AAMGDRLPRKALEMKMSSISQCRYLEVEDVVSCYNLMQECREEEKQDSSVISSIASKRKR 286
           AA    L R+ALE KMS +S    L+ EDV +CY+ M      +    +  S+  +  KR
Sbjct: 271 AATHGALTREALESKMSGLSPSFLLDKEDVFACYSAML----SQPTSPASKSTTTTTGKR 330

[Close]

BLAST of Sed0002324 vs. ExPASy Swiss-Prot
Match: Q2V3B2 (Cyclin-D5-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD5-1 PE=2 SV=2)

HSP 1 Score: 145.2 bits (365), Expect = 1.1e-33
Identity = 102/273 (37.36%), Postives = 150/273 (54.95%), Query Frame = 0


Query: 28  EDEFVDTLLEKETTFGFRNDKCLAFGNWVKCVRLDAIAWILKTRAAFGFGFQTAYLSMIY 87
           ED   D +L++   F     K  +  +     RL AI WIL TR  FGF  QTAY+++ Y
Sbjct: 45  EDYVADLVLKENLRFETLPSKTTSSSD-----RLIAIDWILTTRTRFGFQHQTAYIAISY 104

Query: 88  FDRFLSRR--AITNEKLWAMRLLAVACLSIAAKMEELKVPLLSEFPVE-DFNFESKVIQR 147
           FD FL +R   +  ++ WAMRLL+VACLS+AAKMEE  VP LS++P + DF F+  VI++
Sbjct: 105 FDLFLHKRFIGLQKDETWAMRLLSVACLSLAAKMEERIVPGLSQYPQDHDFVFKPDVIRK 164

Query: 148 MELLVLNTLDWKMGSTTPFTFIPYFISKLTTQSPPTTK---VSQIVELIWVLIREKSTQN 207
            ELL+L+TLDWKM   TPF +  YF++K++  +   +K   + +  + +  L +E S   
Sbjct: 165 TELLILSTLDWKMNLITPFHYFNYFLAKISQDNHSVSKDLVLLRSSDSLLALTKEISFTE 224

Query: 208 HRPSVVAAATAILAAMGD----RLPRKALEMKMSSISQCRYLEVEDVVSCYNLMQECREE 267
           +R  VVAA T +LA+       RL R+ +  K  SIS     E E+V  CY    E  E 
Sbjct: 225 YRQFVVAAVTTLLASSSTSSDIRLTREEIANKFGSISWWTSNENENVYLCYQRTLEIEER 284

Query: 268 EKQ--------DSSVISSIASKRKRLNFSNCDE 283
           +               +S +  ++RL+F + D+
Sbjct: 285 KHMTPPPEIAVSREPPASGSGAKRRLSFDDSDQ 312

[Close]

BLAST of Sed0002324 vs. ExPASy Swiss-Prot
Match: Q10QA2 (Cyclin-D5-3 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD5-3 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.0e-30
Identity = 85/247 (34.41%), Postives = 137/247 (55.47%), Query Frame = 0


Query: 28  EDEFVDTLLEKETTFG-------FRNDKCLAFGNWVKCVRLDAIAWILKTRAAFGFGFQT 87
           +DE++  +L KE   G          ++      W+K  R   + WI+KT A F F  +T
Sbjct: 61  DDEYLALMLSKERCAGGGGGGERGDEEEEEMVEEWMKNARAWCVGWIVKTNAGFRFSLKT 120

Query: 88  AYLSMIYFDRFLSRRAITNEKLWAMRLLAVACLSIAAKMEELKVPLLSEFPVEDFNFESK 147
           AY+++ Y DRFL+RR +  +K WA++LL+VACLS+AAK+EE + P L EF ++ ++  S 
Sbjct: 121 AYVAVTYLDRFLARRCVDRDKEWALQLLSVACLSLAAKVEERRPPRLPEFKLDMYDCAS- 180

Query: 148 VIQRMELLVLNTLDWKMGSTTPFTFIPYFISKLTTQSPPTTKVSQIVELIWVLIREKSTQ 207
            + RMELLVL TL W+M + TPF+++  F +K          V + +E I+  I+  S+ 
Sbjct: 181 -LMRMELLVLTTLKWQMITETPFSYLNCFTAKFRHDERKAI-VLRAIECIFASIKVISSV 240

Query: 208 NHRPSVVAAATAILAAMGDRLPRKALEMKMSSISQCRYLEVEDVVSCYNLMQECREEEKQ 267
            ++PS +A A  ++A   +  P    E+K    S  + L+   V SCYN M    +   Q
Sbjct: 241 GYQPSTIALAAILIARNKETAPNLD-ELKSVVGSLWQQLDTGHVYSCYNKMMIQEDRSMQ 300

[Close]

BLAST of Sed0002324 vs. ExPASy Swiss-Prot
Match: P42751 (Cyclin-D1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD1-1 PE=1 SV=3)

HSP 1 Score: 131.0 bits (328), Expect = 2.2e-29
Identity = 87/201 (43.28%), Postives = 117/201 (58.21%), Query Frame = 0


Query: 60  RLDAIAWILKTRAAFGFGFQTAYLSMIYFDRFLSRRAITNEKLWAMRLLAVACLSIAAKM 119
           R D++AWILK +A + F   TAYL++ Y DRFL  R +     W M+LLAVACLS+AAKM
Sbjct: 82  REDSVAWILKVQAYYNFQPLTAYLAVNYMDRFLYARRLPETSGWPMQLLAVACLSLAAKM 141

Query: 120 EELKVPLLSEFPVE--DFNFESKVIQRMELLVLNTLDWKMGSTTPFTFIPYFISKLTTQS 179
           EE+ VP L +F V    + FE+K I+RMELLVL+ LDW++ S TPF FI +F  K+    
Sbjct: 142 EEILVPSLFDFQVAGVKYLFEAKTIKRMELLVLSVLDWRLRSVTPFDFISFFAYKI---D 201

Query: 180 PPTT----KVSQIVELIWVLIREKSTQNHRPSVVAAATAILAAMGDRLP--RKALEMKMS 239
           P  T     +S   E+I   I+E S   + PS +AAA  +  A  + LP     +    S
Sbjct: 202 PSGTFLGFFISHATEIILSNIKEASFLEYWPSSIAAAAILCVA--NELPSLSSVVNPHES 261

Query: 240 SISQCRYLEVEDVVSCYNLMQ 253
             + C  L  E +V CY LM+
Sbjct: 262 PETWCDGLSKEKIVRCYRLMK 277

[Close]

BLAST of Sed0002324 vs. ExPASy TrEMBL
Match: A0A6J1FJG4 (B-like cyclin OS=Cucurbita moschata OX=3662 GN=LOC111446292 PE=3 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 1.4e-119
Identity = 230/299 (76.92%), Postives = 254/299 (84.95%), Query Frame = 0


Query: 8   LDDEIVGKRGLSYIGKG-SPAEDEFVDTLLEKETTFGFRNDKCLAFGNWVKCVRLDAIAW 67
           +DDEIV +     IG G SPAED++VDTLL KE +FGFRNDK L FGNWVKC RL+AIAW
Sbjct: 1   MDDEIVDEHSFIDIGNGSSPAEDDYVDTLLAKEMSFGFRNDKSLVFGNWVKCARLEAIAW 60

Query: 68  ILKTRAAFGFGFQTAYLSMIYFDRFLSRRAITNEKLWAMRLLAVACLSIAAKMEELKVPL 127
           ILKTRA FGFGFQTAYLS++YFDRFLSRRAITNEK+WA+RLLAVACLS+AAKMEELKVP 
Sbjct: 61  ILKTRAVFGFGFQTAYLSIMYFDRFLSRRAITNEKVWAVRLLAVACLSLAAKMEELKVPA 120

Query: 128 LSEFPVEDFNFESKVIQRMELLVLNTLDWKMGSTTPFTFIPYFISKLTTQSPPTTKVSQI 187
           LSEFPVEDFNFESKVIQRMELLVLNTL+WKMGSTTPF+FIPYFISKL+ +SPP+ KVSQI
Sbjct: 121 LSEFPVEDFNFESKVIQRMELLVLNTLEWKMGSTTPFSFIPYFISKLSIESPPSNKVSQI 180

Query: 188 VELIWVLIREKSTQNHRPSVVAAATAILAAMGDRLPRKALEMKMSSISQCRYLEVEDVVS 247
           VELIWVLIRE+ST+NHRPSVVAAATAILAAM DRL RKALEMKM++ISQCRYLE+EDVVS
Sbjct: 181 VELIWVLIRERSTENHRPSVVAAATAILAAMDDRLTRKALEMKMNTISQCRYLEIEDVVS 240

Query: 248 CYNLMQE-----CREEEK------------------QDSSVISSIASKRKRLNFSNCDE 283
           CYNLMQE     CREE +                   +SSV S+IASKRKRLNFSNCDE
Sbjct: 241 CYNLMQELRLEKCREEAECLKSPDLSPTQMKSMDCSSNSSVTSAIASKRKRLNFSNCDE 299

[Close]

BLAST of Sed0002324 vs. ExPASy TrEMBL
Match: A0A6J1J1K7 (B-like cyclin OS=Cucurbita maxima OX=3661 GN=LOC111480491 PE=3 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 7.0e-119
Identity = 229/299 (76.59%), Postives = 253/299 (84.62%), Query Frame = 0


Query: 8   LDDEIVGKRGLSYIGKG-SPAEDEFVDTLLEKETTFGFRNDKCLAFGNWVKCVRLDAIAW 67
           +DDEIV +     IG G SPAED++VDTLL KE +FGFRNDK L FGNWVKC RL+AIAW
Sbjct: 1   MDDEIVDEHSFIDIGNGSSPAEDDYVDTLLAKEMSFGFRNDKSLVFGNWVKCARLEAIAW 60

Query: 68  ILKTRAAFGFGFQTAYLSMIYFDRFLSRRAITNEKLWAMRLLAVACLSIAAKMEELKVPL 127
           ILKTRA FGFGFQTAYLS++Y DRFLSRRAITNEK+WA+RLLAVACLS+AAKMEELKVP 
Sbjct: 61  ILKTRAVFGFGFQTAYLSIMYLDRFLSRRAITNEKVWAVRLLAVACLSLAAKMEELKVPA 120

Query: 128 LSEFPVEDFNFESKVIQRMELLVLNTLDWKMGSTTPFTFIPYFISKLTTQSPPTTKVSQI 187
           LSEFPVEDFNFESKVIQRMELLVLNTL+WKMGSTTPF+FIPYFISKL+ +SPP+ KVSQI
Sbjct: 121 LSEFPVEDFNFESKVIQRMELLVLNTLEWKMGSTTPFSFIPYFISKLSIESPPSNKVSQI 180

Query: 188 VELIWVLIREKSTQNHRPSVVAAATAILAAMGDRLPRKALEMKMSSISQCRYLEVEDVVS 247
           VELIWVLIRE+ST+NHRPSVVAAATAILAAM DRL RKALEMKM++ISQCRYLE+EDVVS
Sbjct: 181 VELIWVLIRERSTENHRPSVVAAATAILAAMDDRLTRKALEMKMNTISQCRYLEIEDVVS 240

Query: 248 CYNLMQE-----CREEEK------------------QDSSVISSIASKRKRLNFSNCDE 283
           CYNLMQE     CREE +                   +SSV S+IASKRKRLNFSNCDE
Sbjct: 241 CYNLMQELRLEKCREEAECLKSPDLSPTQMKSMDCSSNSSVTSAIASKRKRLNFSNCDE 299

[Close]

BLAST of Sed0002324 vs. ExPASy TrEMBL
Match: A0A0A0KZX7 (B-like cyclin OS=Cucumis sativus OX=3659 GN=Csa_4G642510 PE=3 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 8.6e-117
Identity = 227/306 (74.18%), Postives = 252/306 (82.35%), Query Frame = 0


Query: 1   MDEIGGCLDDEIVGKRGLSYIGKGSPA-EDEFVDTLLEKETTFGFRNDKCLAFGNWVKCV 60
           MD++G CLD+EIV +     I   SPA ED++VDTLL KET+FGFR DK L FGNW+KC 
Sbjct: 1   MDDVGVCLDEEIVDEHTFIDIANPSPAEEDDYVDTLLVKETSFGFRKDKSLMFGNWMKCA 60

Query: 61  RLDAIAWILKTRAAFGFGFQTAYLSMIYFDRFLSRRAITNEKLWAMRLLAVACLSIAAKM 120
           RLDAIAWILKTR  FGFG QTAYLSMIYFDRFLSRRAITNEKLWA+RLLAVACLS+A+KM
Sbjct: 61  RLDAIAWILKTRNVFGFGCQTAYLSMIYFDRFLSRRAITNEKLWAIRLLAVACLSLASKM 120

Query: 121 EELKVPLLSEFPVEDFNFESKVIQRMELLVLNTLDWKMGSTTPFTFIPYFISKLTTQSPP 180
           EELKVP LSEFPV+DFNFESKVIQRMELLVLNTL+WKMGSTTPF+FIPYFISKL+ +SPP
Sbjct: 121 EELKVPALSEFPVDDFNFESKVIQRMELLVLNTLEWKMGSTTPFSFIPYFISKLSIESPP 180

Query: 181 TTKVSQIVELIWVLIREKSTQNHRPSVVAAATAILAAMGDRLPRKALEMKMSSISQCRYL 240
           + KVSQIVELIWV+IRE STQNHRPSVVAAATAILA M DRL RKAL++KM SISQCRYL
Sbjct: 181 SNKVSQIVELIWVMIRETSTQNHRPSVVAAATAILATMDDRLTRKALQLKMKSISQCRYL 240

Query: 241 EVEDVVSCYNLMQE-----CREEE------------------KQDSSVISSIASKRKRLN 283
           EVE+V+SCYNLMQE     CREE                    ++SSV SS+ASKRKRLN
Sbjct: 241 EVEEVISCYNLMQELRLEKCREEADCLKSPDLSPTQMKSMDCSENSSVTSSLASKRKRLN 300

[Close]

BLAST of Sed0002324 vs. ExPASy TrEMBL
Match: A0A1S3BVH5 (B-like cyclin OS=Cucumis melo OX=3656 GN=LOC103493602 PE=3 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 1.1e-116
Identity = 227/306 (74.18%), Postives = 250/306 (81.70%), Query Frame = 0


Query: 1   MDEIGGCLDDEIVGKRGLSYIGKGSPA-EDEFVDTLLEKETTFGFRNDKCLAFGNWVKCV 60
           MDE+G CLD+EIV +     IG  SPA ED++VD LL KET+FGFR DK L  GNW+KC 
Sbjct: 1   MDEVGACLDEEIVDEHTFIDIGNPSPAEEDDYVDILLVKETSFGFRKDKSLVLGNWMKCA 60

Query: 61  RLDAIAWILKTRAAFGFGFQTAYLSMIYFDRFLSRRAITNEKLWAMRLLAVACLSIAAKM 120
           RLDAIAWILKTR  FGFG QTAYLSMIYFDRFLSRRAITNEKLWA+RLLAVACLS+AAKM
Sbjct: 61  RLDAIAWILKTRNVFGFGCQTAYLSMIYFDRFLSRRAITNEKLWAIRLLAVACLSLAAKM 120

Query: 121 EELKVPLLSEFPVEDFNFESKVIQRMELLVLNTLDWKMGSTTPFTFIPYFISKLTTQSPP 180
           EELKVP LSEFPV+DFNFESKVIQRMELLVLNTL+WKMGSTTPF+FIPYFISKL+ +SPP
Sbjct: 121 EELKVPALSEFPVDDFNFESKVIQRMELLVLNTLEWKMGSTTPFSFIPYFISKLSIESPP 180

Query: 181 TTKVSQIVELIWVLIREKSTQNHRPSVVAAATAILAAMGDRLPRKALEMKMSSISQCRYL 240
           + KVSQIVELIWV+IRE +TQNHRPSVVA ATAILA M DRL RKALE+KM SISQCRYL
Sbjct: 181 SNKVSQIVELIWVMIRETNTQNHRPSVVAVATAILATMDDRLTRKALELKMKSISQCRYL 240

Query: 241 EVEDVVSCYNLMQE-----CREEE------------------KQDSSVISSIASKRKRLN 283
           E+E+V+SCYNLMQE     CREE                    ++SSV SSIASKRKRLN
Sbjct: 241 ELEEVISCYNLMQELRLEKCREEADCLKSPDLSPTQMKPLDCSENSSVTSSIASKRKRLN 300

[Close]

BLAST of Sed0002324 vs. ExPASy TrEMBL
Match: A0A6J1CG75 (B-like cyclin OS=Momordica charantia OX=3673 GN=LOC111011140 PE=3 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 4.3e-116
Identity = 224/303 (73.93%), Postives = 254/303 (83.83%), Query Frame = 0


Query: 7   CLDDEIVGKRGLSYIGKG--SPAEDEFVDTLLEKETTFGFRNDKCLAFGNWVKCVRLDAI 66
           CLD EIV +   ++IG G  S AED++VDTLL KET+FGFR +K L FGNWV+C RL+AI
Sbjct: 15  CLDGEIVEEEEQTFIGIGNQSEAEDDYVDTLLAKETSFGFRKEKSLVFGNWVRCARLEAI 74

Query: 67  AWILKTRAAFGFGFQTAYLSMIYFDRFLSRRAITNEKLWAMRLLAVACLSIAAKMEELKV 126
           AWILKTR  FGFGFQTAYLSMIYFDRFLSRRAI NEKLWA+RLLAVACLS+AAKMEELKV
Sbjct: 75  AWILKTREVFGFGFQTAYLSMIYFDRFLSRRAIINEKLWAIRLLAVACLSLAAKMEELKV 134

Query: 127 PLLSEFPVEDFNFESKVIQRMELLVLNTLDWKMGSTTPFTFIPYFISKLTTQSPPTTKVS 186
           P LSEFPVEDF+FESKVIQRMELLVLNTL+WKMGSTTPF+FIPYFISKL+ +SPP+ KVS
Sbjct: 135 PALSEFPVEDFSFESKVIQRMELLVLNTLEWKMGSTTPFSFIPYFISKLSIESPPSNKVS 194

Query: 187 QIVELIWVLIREKSTQNHRPSVVAAATAILAAMGDRLPRKALEMKMSSISQCRYLEVEDV 246
           QIVELIWV+IRE+ST++HRPSV+AAA AILAAM DRL RKALE+KM+SISQCR+LEVEDV
Sbjct: 195 QIVELIWVMIRERSTEDHRPSVIAAAAAILAAMDDRLTRKALELKMNSISQCRFLEVEDV 254

Query: 247 VSCYNLMQE-----CREEEK------------------QDSSVISSIASKRKRLNFSNCD 285
           +SCYNLMQE     CREE +                  ++SSV S+IASKRKRLNFSNCD
Sbjct: 255 ISCYNLMQELRLERCREEAECLKSPDLSPTQMKSMDCSENSSVTSTIASKRKRLNFSNCD 314

[Close]

BLAST of Sed0002324 vs. TAIR 10
Match: AT4G37630.2 (cyclin d5;1 )

HSP 1 Score: 149.8 bits (377), Expect = 3.3e-36
Identity = 103/271 (38.01%), Postives = 150/271 (55.35%), Query Frame = 0


Query: 28  EDEFVDTLLEKETTFGFRNDKCLAFGNWVKCVRLDAIAWILKTRAAFGFGFQTAYLSMIY 87
           ED   D +L++   F     K  +  +     RL AI WIL TR  FGF  QTAY+++ Y
Sbjct: 45  EDYVADLVLKENLRFETLPSKTTSSSD-----RLIAIDWILTTRTRFGFQHQTAYIAISY 104

Query: 88  FDRFLSRRAITNEKLWAMRLLAVACLSIAAKMEELKVPLLSEFPVE-DFNFESKVIQRME 147
           FD FL +R I  ++ WAMRLL+VACLS+AAKMEE  VP LS++P + DF F+  VI++ E
Sbjct: 105 FDLFLHKRFIGKDETWAMRLLSVACLSLAAKMEERIVPGLSQYPQDHDFVFKPDVIRKTE 164

Query: 148 LLVLNTLDWKMGSTTPFTFIPYFISKLTTQSPPTTK---VSQIVELIWVLIREKSTQNHR 207
           LL+L+TLDWKM   TPF +  YF++K++  +   +K   + +  + +  L +E S   +R
Sbjct: 165 LLILSTLDWKMNLITPFHYFNYFLAKISQDNHSVSKDLVLLRSSDSLLALTKEISFTEYR 224

Query: 208 PSVVAAATAILAAMGD----RLPRKALEMKMSSISQCRYLEVEDVVSCYNLMQECREEEK 267
             VVAA T +LA+       RL R+ +  K  SIS     E E+V  CY    E  E + 
Sbjct: 225 QFVVAAVTTLLASSSTSSDIRLTREEIANKFGSISWWTSNENENVYLCYQRTLEIEERKH 284

Query: 268 Q--------DSSVISSIASKRKRLNFSNCDE 283
                         +S +  ++RL+F + D+
Sbjct: 285 MTPPPEIAVSREPPASGSGAKRRLSFDDSDQ 310

[Close]

BLAST of Sed0002324 vs. TAIR 10
Match: AT4G37630.1 (cyclin d5;1 )

HSP 1 Score: 145.2 bits (365), Expect = 8.1e-35
Identity = 102/273 (37.36%), Postives = 150/273 (54.95%), Query Frame = 0


Query: 28  EDEFVDTLLEKETTFGFRNDKCLAFGNWVKCVRLDAIAWILKTRAAFGFGFQTAYLSMIY 87
           ED   D +L++   F     K  +  +     RL AI WIL TR  FGF  QTAY+++ Y
Sbjct: 45  EDYVADLVLKENLRFETLPSKTTSSSD-----RLIAIDWILTTRTRFGFQHQTAYIAISY 104

Query: 88  FDRFLSRR--AITNEKLWAMRLLAVACLSIAAKMEELKVPLLSEFPVE-DFNFESKVIQR 147
           FD FL +R   +  ++ WAMRLL+VACLS+AAKMEE  VP LS++P + DF F+  VI++
Sbjct: 105 FDLFLHKRFIGLQKDETWAMRLLSVACLSLAAKMEERIVPGLSQYPQDHDFVFKPDVIRK 164

Query: 148 MELLVLNTLDWKMGSTTPFTFIPYFISKLTTQSPPTTK---VSQIVELIWVLIREKSTQN 207
            ELL+L+TLDWKM   TPF +  YF++K++  +   +K   + +  + +  L +E S   
Sbjct: 165 TELLILSTLDWKMNLITPFHYFNYFLAKISQDNHSVSKDLVLLRSSDSLLALTKEISFTE 224

Query: 208 HRPSVVAAATAILAAMGD----RLPRKALEMKMSSISQCRYLEVEDVVSCYNLMQECREE 267
           +R  VVAA T +LA+       RL R+ +  K  SIS     E E+V  CY    E  E 
Sbjct: 225 YRQFVVAAVTTLLASSSTSSDIRLTREEIANKFGSISWWTSNENENVYLCYQRTLEIEER 284

Query: 268 EKQ--------DSSVISSIASKRKRLNFSNCDE 283
           +               +S +  ++RL+F + D+
Sbjct: 285 KHMTPPPEIAVSREPPASGSGAKRRLSFDDSDQ 312

[Close]

BLAST of Sed0002324 vs. TAIR 10
Match: AT1G70210.1 (CYCLIN D1;1 )

HSP 1 Score: 131.0 bits (328), Expect = 1.6e-30
Identity = 87/201 (43.28%), Postives = 117/201 (58.21%), Query Frame = 0


Query: 60  RLDAIAWILKTRAAFGFGFQTAYLSMIYFDRFLSRRAITNEKLWAMRLLAVACLSIAAKM 119
           R D++AWILK +A + F   TAYL++ Y DRFL  R +     W M+LLAVACLS+AAKM
Sbjct: 82  REDSVAWILKVQAYYNFQPLTAYLAVNYMDRFLYARRLPETSGWPMQLLAVACLSLAAKM 141

Query: 120 EELKVPLLSEFPVE--DFNFESKVIQRMELLVLNTLDWKMGSTTPFTFIPYFISKLTTQS 179
           EE+ VP L +F V    + FE+K I+RMELLVL+ LDW++ S TPF FI +F  K+    
Sbjct: 142 EEILVPSLFDFQVAGVKYLFEAKTIKRMELLVLSVLDWRLRSVTPFDFISFFAYKI---D 201

Query: 180 PPTT----KVSQIVELIWVLIREKSTQNHRPSVVAAATAILAAMGDRLP--RKALEMKMS 239
           P  T     +S   E+I   I+E S   + PS +AAA  +  A  + LP     +    S
Sbjct: 202 PSGTFLGFFISHATEIILSNIKEASFLEYWPSSIAAAAILCVA--NELPSLSSVVNPHES 261

Query: 240 SISQCRYLEVEDVVSCYNLMQ 253
             + C  L  E +V CY LM+
Sbjct: 262 PETWCDGLSKEKIVRCYRLMK 277

[Close]

BLAST of Sed0002324 vs. TAIR 10
Match: AT2G22490.1 (Cyclin D2;1 )

HSP 1 Score: 129.8 bits (325), Expect = 3.5e-30
Identity = 93/263 (35.36%), Postives = 139/263 (52.85%), Query Frame = 0


Query: 9   DDEIVGKRGLSYIGKGSPA-EDEFVDTLLEKETTF--GFRNDKCLAFGNWVKCVRLDAIA 68
           DD   G   +  +G  S +  ++ +  +L +E  F  G    K L  G+    VR  A+ 
Sbjct: 43  DDNFGGNGSIPMMGSSSSSLSEDRIKEMLVREIEFCPGTDYVKRLLSGDLDLSVRNQALD 102

Query: 69  WILKTRAAFGFGFQTAYLSMIYFDRFLSRRAITNEKLWAMRLLAVACLSIAAKMEELKVP 128
           WILK  A + FG     LSM Y DRFL+   +  +K WA +LLAV+CLS+A+KMEE  VP
Sbjct: 103 WILKVCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVP 162

Query: 129 LLSEFPVED--FNFESKVIQRMELLVLNTLDWKMGSTTPFTFIPYFISKLTTQSPPTTKV 188
            + +  VED  F FE+K I+RMELLV+ TL+W++ + TPF+FI YF+ K++        +
Sbjct: 163 HIVDLQVEDPKFVFEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKISGHVSENL-I 222

Query: 189 SQIVELIWVLIREKSTQNHRPSVVAAATAILAAMGDRLPRKALEMKMSSISQCRYLEVED 248
            +    I    +     + RPS +AAA A+  ++         E  +SS+    Y++ E 
Sbjct: 223 YRSSRFILNTTKAIEFLDFRPSEIAAAAAVSVSISGETECIDEEKALSSLI---YVKQER 282

Query: 249 VVSCYNLMQECREEEKQDSSVIS 267
           V  C NLM+    EE    + +S
Sbjct: 283 VKRCLNLMRSLTGEENVRGTSLS 301

[Close]

BLAST of Sed0002324 vs. TAIR 10
Match: AT2G22490.2 (Cyclin D2;1 )

HSP 1 Score: 127.1 bits (318), Expect = 2.3e-29
Identity = 92/263 (34.98%), Postives = 138/263 (52.47%), Query Frame = 0


Query: 9   DDEIVGKRGLSYIGKGSPA-EDEFVDTLLEKETTF--GFRNDKCLAFGNWVKCVRLDAIA 68
           DD   G   +  +G  S +  ++ +  +L +E  F  G    K L  G+    VR  A+ 
Sbjct: 43  DDNFGGNGSIPMMGSSSSSLSEDRIKEMLVREIEFCPGTDYVKRLLSGDLDLSVRNQALD 102

Query: 69  WILKTRAAFGFGFQTAYLSMIYFDRFLSRRAITNEKLWAMRLLAVACLSIAAKMEELKVP 128
           WILK  A + FG     LSM Y DRFL+   +  +K WA +LLAV+CLS+A+KMEE  VP
Sbjct: 103 WILKVCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVP 162

Query: 129 LLSEFPVED--FNFESKVIQRMELLVLNTLDWKMGSTTPFTFIPYFISKLTTQSPPTTKV 188
            + +  VED  F FE+K I+RMELLV+ TL+W++ + TPF+FI YF+ K++        +
Sbjct: 163 HIVDLQVEDPKFVFEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKISGHVSENL-I 222

Query: 189 SQIVELIWVLIREKSTQNHRPSVVAAATAILAAMGDRLPRKALEMKMSSISQCRYLEVED 248
            +    I    +     + RPS +AAA A+  ++         E  +SS+   +  + E 
Sbjct: 223 YRSSRFILNTTKAIEFLDFRPSEIAAAAAVSVSISGETECIDEEKALSSLIYVK--QQER 282

Query: 249 VVSCYNLMQECREEEKQDSSVIS 267
           V  C NLM+    EE    + +S
Sbjct: 283 VKRCLNLMRSLTGEENVRGTSLS 302

The following BLAST results are available for this feature:

BLAST of Sed0002324 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022940806.1	2.9e-119	76.92	cyclin-D5-2-like [Cucurbita moschata] >KAG6608427.1 Cyclin-D5-2, partial [Cucurb...	[more]
XP_023523904.1	2.9e-119	76.92	cyclin-D5-2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022981329.1	1.4e-118	76.59	cyclin-D5-2-like [Cucurbita maxima]	[more]
XP_038899665.1	1.0e-116	74.75	cyclin-D5-2-like isoform X1 [Benincasa hispida]	[more]
XP_004141404.1	1.8e-116	74.18	cyclin-D5-2 isoform X1 [Cucumis sativus]	[more]

BLAST of Sed0002324 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2QMW1	6.2e-40	38.63	Cyclin-D5-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD5-2 PE=2 SV=1	[more]
Q0DQA9	4.0e-39	36.98	Cyclin-D5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD5-1 PE=2 SV=2	[more]
Q2V3B2	1.1e-33	37.36	Cyclin-D5-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD5-1 PE=2 SV=2	[more]
Q10QA2	2.0e-30	34.41	Cyclin-D5-3 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD5-3 PE=2 SV=1	[more]
P42751	2.2e-29	43.28	Cyclin-D1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD1-1 PE=1 SV=3	[more]

BLAST of Sed0002324 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FJG4	1.4e-119	76.92	B-like cyclin OS=Cucurbita moschata OX=3662 GN=LOC111446292 PE=3 SV=1	[more]
A0A6J1J1K7	7.0e-119	76.59	B-like cyclin OS=Cucurbita maxima OX=3661 GN=LOC111480491 PE=3 SV=1	[more]
A0A0A0KZX7	8.6e-117	74.18	B-like cyclin OS=Cucumis sativus OX=3659 GN=Csa_4G642510 PE=3 SV=1	[more]
A0A1S3BVH5	1.1e-116	74.18	B-like cyclin OS=Cucumis melo OX=3656 GN=LOC103493602 PE=3 SV=1	[more]
A0A6J1CG75	4.3e-116	73.93	B-like cyclin OS=Momordica charantia OX=3673 GN=LOC111011140 PE=3 SV=1	[more]

BLAST of Sed0002324 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37630.2	3.3e-36	38.01	cyclin d5;1	[more]
AT4G37630.1	8.1e-35	37.36	cyclin d5;1	[more]
AT1G70210.1	1.6e-30	43.28	CYCLIN D1;1	[more]
AT2G22490.1	3.5e-30	35.36	Cyclin D2;1	[more]
AT2G22490.2	2.3e-29	34.98	Cyclin D2;1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013763	Cyclin-like	SMART	SM00385	cyclin_7	coord: 65..151 e-value: 1.5E-10 score: 51.1
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 60..150 e-value: 2.82385E-14 score: 64.9524
IPR004367	Cyclin, C-terminal domain	SMART	SM01332	Cyclin_C_2	coord: 160..281 e-value: 9.3E-4 score: 28.5
IPR004367	Cyclin, C-terminal domain	PFAM	PF02984	Cyclin_C	coord: 161..273 e-value: 2.1E-6 score: 27.8
IPR006671	Cyclin, N-terminal	PFAM	PF00134	Cyclin_N	coord: 58..157 e-value: 9.5E-23 score: 80.3
IPR006671	Cyclin, N-terminal	PROSITE	PS00292	CYCLINS	coord: 60..91
None	No IPR available	GENE3D	1.10.472.10		coord: 159..247 e-value: 2.4E-35 score: 123.8
None	No IPR available	GENE3D	1.10.472.10		coord: 59..158 e-value: 2.4E-35 score: 123.8
None	No IPR available	PANTHER	PTHR10177:SF437	CYCLIN-D5-1	coord: 31..267
IPR039361	Cyclin	PANTHER	PTHR10177	CYCLINS	coord: 31..267
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 143..256
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 28..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002324.1	Sed0002324.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0044772	mitotic cell cycle phase transition
biological_process	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity
cellular_component	GO:0000307	cyclin-dependent protein kinase holoenzyme complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity