Sed0002275 (gene) Chayote v1

Overview
NameSed0002275
Typegene
OrganismSechium edule (Chayote v1)
Descriptionflowering-promoting factor 1-like protein 1
LocationLG02: 48887584 .. 48887946 (+)
RNA-Seq ExpressionSed0002275
SyntenySed0002275
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAGGTGTTTGGATATTCGACAAGGGCGTAATCCGGCTGGTGGAGAGGCCGGGTTCGGTGGAGACAGCGGCAGCGGAGGGCGGAGGAGGAAGCAGTGGCAGCCCGAGGCGGCGGAAGGTTCTGGTGTACACGCCGACGAACGAGGAGATGACGTCGTACGCGGTGCTTAAAAACAAGCTTTCGAGTTTAGGATGGGAAGTTTACTATGAAGATTCGGAGGTTGTTCAGTTTCATAAGCCTTGTTCGGTTGACCTCATTTCTCTTCCTATTGACTTTAACAAGATCAAGGCCAGGCACTTGTACGACATCGTCGTTAGGAATCGTAATCTTTTTCAAGTTAAGGACATGCAGTCTCACTAG

mRNA sequence

ATGTCAGGTGTTTGGATATTCGACAAGGGCGTAATCCGGCTGGTGGAGAGGCCGGGTTCGGTGGAGACAGCGGCAGCGGAGGGCGGAGGAGGAAGCAGTGGCAGCCCGAGGCGGCGGAAGGTTCTGGTGTACACGCCGACGAACGAGGAGATGACGTCGTACGCGGTGCTTAAAAACAAGCTTTCGAGTTTAGGATGGGAAGTTTACTATGAAGATTCGGAGGTTGTTCAGTTTCATAAGCCTTGTTCGGTTGACCTCATTTCTCTTCCTATTGACTTTAACAAGATCAAGGCCAGGCACTTGTACGACATCGTCGTTAGGAATCGTAATCTTTTTCAAGTTAAGGACATGCAGTCTCACTAG

Coding sequence (CDS)

ATGTCAGGTGTTTGGATATTCGACAAGGGCGTAATCCGGCTGGTGGAGAGGCCGGGTTCGGTGGAGACAGCGGCAGCGGAGGGCGGAGGAGGAAGCAGTGGCAGCCCGAGGCGGCGGAAGGTTCTGGTGTACACGCCGACGAACGAGGAGATGACGTCGTACGCGGTGCTTAAAAACAAGCTTTCGAGTTTAGGATGGGAAGTTTACTATGAAGATTCGGAGGTTGTTCAGTTTCATAAGCCTTGTTCGGTTGACCTCATTTCTCTTCCTATTGACTTTAACAAGATCAAGGCCAGGCACTTGTACGACATCGTCGTTAGGAATCGTAATCTTTTTCAAGTTAAGGACATGCAGTCTCACTAG

Protein sequence

MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARHLYDIVVRNRNLFQVKDMQSH
Homology
[Close]
BLAST of Sed0002275 vs. NCBI nr
Match: KAA0049489.1 (flowering-promoting factor 1-like protein 3 [Cucumis melo var. makuwa] >TYK09613.1 flowering-promoting factor 1-like protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 192.6 bits (488), Expect = 2.0e-45
Identity = 95/120 (79.17%), Postives = 102/120 (85.00%), Query Frame = 0 

Query: 1   MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNK 60
           MSGVWIFD GVIRLVER G+VET  +   GGS     +RKVL+YTPTNE MTSY VL+NK
Sbjct: 1   MSGVWIFDNGVIRLVERAGAVETTTSSSSGGSG----KRKVLMYTPTNEAMTSYEVLENK 60

Query: 61  LSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARHLYDIVVRNRNLFQVKDMQSH 120
           LS LGWEVYYED EV+QFHKP SVDLISLP DFNK+KARHLYDIVVRNRNLFQVKDMQSH
Sbjct: 61  LSMLGWEVYYEDGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKDMQSH 116

[Close]
BLAST of Sed0002275 vs. NCBI nr
Match: KGN57101.1 (hypothetical protein Csa_010574 [Cucumis sativus])

HSP 1 Score: 188.7 bits (478), Expect = 2.9e-44
Identity = 93/120 (77.50%), Postives = 100/120 (83.33%), Query Frame = 0 

Query: 1   MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNK 60
           MSGVWIFD GVIRLVER G+ ET  + G G       +RKVL+YTPTNE MTSY VL+NK
Sbjct: 1   MSGVWIFDNGVIRLVERAGAAETTTSGGSG-------KRKVLIYTPTNEAMTSYEVLENK 60

Query: 61  LSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARHLYDIVVRNRNLFQVKDMQSH 120
           LS LGWEVYYED EV+QFHKP SVDLISLP DFNK+KARHLYDIVVRNRNLFQVKDMQSH
Sbjct: 61  LSMLGWEVYYEDGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKDMQSH 113

[Close]
BLAST of Sed0002275 vs. NCBI nr
Match: XP_022979994.1 (flowering-promoting factor 1-like protein 1 [Cucurbita maxima])

HSP 1 Score: 187.2 bits (474), Expect = 8.3e-44
Identity = 93/119 (78.15%), Postives = 103/119 (86.55%), Query Frame = 0 

Query: 1   MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNK 60
           MSGVW+FD GVIRLVER G+VET    G GG      RRKVL+YTPTNE MTSY+VLKNK
Sbjct: 1   MSGVWVFDNGVIRLVERAGAVET----GAGG------RRKVLIYTPTNEAMTSYSVLKNK 60

Query: 61  LSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARHLYDIVVRNRNLFQVKDMQS 120
           L+SLGWEVYYEDSEV+QFHKP SVDLIS+P DFNK+KARHLYDIVV+NRN+FQVKDMQS
Sbjct: 61  LASLGWEVYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKNRNVFQVKDMQS 109

[Close]
BLAST of Sed0002275 vs. NCBI nr
Match: XP_022956217.1 (flowering-promoting factor 1-like protein 1 [Cucurbita moschata] >KAG6582219.1 Flowering-promoting factor 1-like protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018618.1 Flowering-promoting factor 1-like protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 184.9 bits (468), Expect = 4.1e-43
Identity = 92/119 (77.31%), Postives = 101/119 (84.87%), Query Frame = 0 

Query: 1   MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNK 60
           MSGVW+FD GVIRLVER G+ ET    G GG      RRKVL+YTPTNE MTSY VLKNK
Sbjct: 1   MSGVWVFDNGVIRLVERAGAAET----GAGG------RRKVLIYTPTNEAMTSYPVLKNK 60

Query: 61  LSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARHLYDIVVRNRNLFQVKDMQS 120
           L+SLGWEVYYEDSEV+QFHKP SVDLIS+P DFNK+KARHLYDIVV+NRN+FQVKDMQS
Sbjct: 61  LASLGWEVYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKNRNVFQVKDMQS 109

[Close]
BLAST of Sed0002275 vs. NCBI nr
Match: XP_023528953.1 (flowering-promoting factor 1-like protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 182.6 bits (462), Expect = 2.0e-42
Identity = 90/119 (75.63%), Postives = 100/119 (84.03%), Query Frame = 0 

Query: 1   MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNK 60
           MSGVW+FD GVIRLVER G+ ET    G GG      RRKVL+Y PTNE MTSY +LKNK
Sbjct: 1   MSGVWVFDNGVIRLVERAGAAET----GAGG------RRKVLIYKPTNEAMTSYPILKNK 60

Query: 61  LSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARHLYDIVVRNRNLFQVKDMQS 120
           L+SLGWEVYYEDSEV+QFHKP SVDLIS+P DFNK+KARHLYDIVV+NRN+FQVKDMQS
Sbjct: 61  LASLGWEVYYEDSEVMQFHKPSSVDLISIPTDFNKLKARHLYDIVVKNRNVFQVKDMQS 109

[Close]
BLAST of Sed0002275 vs. ExPASy Swiss-Prot
Match: Q0E1D7 (Flowering-promoting factor 1-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0460200 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.5e-27
Identity = 59/116 (50.86%), Postives = 82/116 (70.69%), Query Frame = 0 

Query: 1   MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNK 60
           M+GVW+F  G++R VE PGS E+++A  GGG      RRKVLV+ P+ E + SY VL+ +
Sbjct: 1   MAGVWVFKDGIVRRVENPGSEESSSAGDGGGGG----RRKVLVHVPSGEVVASYEVLERR 60

Query: 61  LSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARHLYDIVVRNRNLFQVKD 117
           L  LGWE Y  D  ++QFH+  +V LIS+P DF+K K  H+YDIVV+ RN+F+V+D
Sbjct: 61  LRELGWERYLTDPCLLQFHQRSTVHLISVPRDFSKFKLVHMYDIVVKTRNVFEVRD 112

[Close]
BLAST of Sed0002275 vs. ExPASy Swiss-Prot
Match: Q9LGE3 (Flowering-promoting factor 1-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RAA1 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 7.4e-27
Identity = 59/116 (50.86%), Postives = 80/116 (68.97%), Query Frame = 0 

Query: 1   MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNK 60
           MSGVW+F  GV+RLVE+  +    A  GG        RRK LV+TP+ + ++SYA L+ +
Sbjct: 1   MSGVWVFKNGVVRLVEKQQATAGTAVAGG--------RRKALVHTPSGQVVSSYAALEAR 60

Query: 61  LSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARHLYDIVVRNRNLFQVKD 117
           L++LGWE YYED  + QFHK  S+DLISLP DF+   + H+YDIVV+NR+ F+V D
Sbjct: 61  LTALGWERYYEDPSLFQFHKRGSLDLISLPADFSAFSSVHMYDIVVKNRDSFRVVD 108

[Close]
BLAST of Sed0002275 vs. ExPASy Swiss-Prot
Match: Q9LXB5 (Flowering-promoting factor 1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLP2 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.3e-26
Identity = 62/117 (52.99%), Postives = 82/117 (70.09%), Query Frame = 0 

Query: 1   MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNK 60
           MSGVW+F+ GVIRLVE P        + GG S+ S  RR VLVY PT E ++SY+ L+  
Sbjct: 1   MSGVWVFNNGVIRLVENPN-------QSGGVSTQSHGRRNVLVYLPTGEAVSSYSSLEQI 60

Query: 61  LSSLGWEVYYE-DSEVVQFHKPCSVDLISLPIDFNKIKARHLYDIVVRNRNLFQVKD 117
           L SLGWE Y+  DS+++Q+HK  S+DLISLP DF+K  + ++YDIVV+N N F V+D
Sbjct: 61  LRSLGWERYFSGDSDLIQYHKRSSIDLISLPRDFSKFNSVYMYDIVVKNPNSFHVRD 110

[Close]
BLAST of Sed0002275 vs. ExPASy Swiss-Prot
Match: Q8LR63 (Flowering-promoting factor 1-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0933500 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 2.8e-26
Identity = 62/127 (48.82%), Postives = 84/127 (66.14%), Query Frame = 0 

Query: 1   MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPR--RRKVLVYTPTNEEMTSYAVLK 60
           MSGVW+F  GV++LVE P +   +   GGGG  G     RRK L++ PT E +TSYA L+
Sbjct: 1   MSGVWVFRNGVVKLVENPPASANSGGGGGGGGGGGGGGIRRKALLHMPTGEVVTSYASLE 60

Query: 61  NKLSSLGWEVYYED--------SEVVQFHKPCSVDLISLPIDFNKIKARHLYDIVVRNRN 118
            KL++LGWE YY          + ++QFHK  SVDLISLP DF++  + H+YDIVV+NR+
Sbjct: 61  RKLAALGWERYYSGGGGAAAAAAMMLQFHKRSSVDLISLPKDFSQFGSVHMYDIVVKNRD 120

[Close]
BLAST of Sed0002275 vs. ExPASy Swiss-Prot
Match: Q5Q0B3 (Flowering-promoting factor 1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=FLP1 PE=2 SV=2)

HSP 1 Score: 115.5 bits (288), Expect = 4.0e-25
Identity = 59/124 (47.58%), Postives = 85/124 (68.55%), Query Frame = 0 

Query: 1   MSGVWIFDK-GVIRLVERP---GSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAV 60
           MSGVW+F+K GV+RLVE P    + +++ +   GG+     RRK+LV+ P++E ++SY  
Sbjct: 1   MSGVWVFNKNGVMRLVENPYNQSAGDSSESSSSGGNQQQRMRRKILVHLPSSEVVSSYGS 60

Query: 61  LKNKLSSLGWEVYY---EDSEVVQFHKPCSVDLISLPIDFNKIKARHLYDIVVRNRNLFQ 118
           L+  L +LGWE YY       ++QFHK  S+DLISLP DF+K  + H+YDIVV+N N+F 
Sbjct: 61  LEKILKNLGWERYYSGDNTDHLLQFHKRTSIDLISLPRDFSKFNSIHMYDIVVKNPNVFH 120

[Close]
BLAST of Sed0002275 vs. ExPASy TrEMBL
Match: A0A5A7U7L7 (Flowering-promoting factor 1-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold23597G00010 PE=3 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 9.6e-46
Identity = 95/120 (79.17%), Postives = 102/120 (85.00%), Query Frame = 0 

Query: 1   MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNK 60
           MSGVWIFD GVIRLVER G+VET  +   GGS     +RKVL+YTPTNE MTSY VL+NK
Sbjct: 1   MSGVWIFDNGVIRLVERAGAVETTTSSSSGGSG----KRKVLMYTPTNEAMTSYEVLENK 60

Query: 61  LSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARHLYDIVVRNRNLFQVKDMQSH 120
           LS LGWEVYYED EV+QFHKP SVDLISLP DFNK+KARHLYDIVVRNRNLFQVKDMQSH
Sbjct: 61  LSMLGWEVYYEDGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKDMQSH 116

[Close]
BLAST of Sed0002275 vs. ExPASy TrEMBL
Match: A0A0A0LAK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G153750 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.4e-44
Identity = 93/120 (77.50%), Postives = 100/120 (83.33%), Query Frame = 0 

Query: 1   MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNK 60
           MSGVWIFD GVIRLVER G+ ET  + G G       +RKVL+YTPTNE MTSY VL+NK
Sbjct: 1   MSGVWIFDNGVIRLVERAGAAETTTSGGSG-------KRKVLIYTPTNEAMTSYEVLENK 60

Query: 61  LSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARHLYDIVVRNRNLFQVKDMQSH 120
           LS LGWEVYYED EV+QFHKP SVDLISLP DFNK+KARHLYDIVVRNRNLFQVKDMQSH
Sbjct: 61  LSMLGWEVYYEDGEVMQFHKPSSVDLISLPKDFNKLKARHLYDIVVRNRNLFQVKDMQSH 113

[Close]
BLAST of Sed0002275 vs. ExPASy TrEMBL
Match: A0A6J1IY48 (flowering-promoting factor 1-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111479520 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 4.0e-44
Identity = 93/119 (78.15%), Postives = 103/119 (86.55%), Query Frame = 0 

Query: 1   MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNK 60
           MSGVW+FD GVIRLVER G+VET    G GG      RRKVL+YTPTNE MTSY+VLKNK
Sbjct: 1   MSGVWVFDNGVIRLVERAGAVET----GAGG------RRKVLIYTPTNEAMTSYSVLKNK 60

Query: 61  LSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARHLYDIVVRNRNLFQVKDMQS 120
           L+SLGWEVYYEDSEV+QFHKP SVDLIS+P DFNK+KARHLYDIVV+NRN+FQVKDMQS
Sbjct: 61  LASLGWEVYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKNRNVFQVKDMQS 109

[Close]
BLAST of Sed0002275 vs. ExPASy TrEMBL
Match: A0A6J1GVQ4 (flowering-promoting factor 1-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111457977 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 2.0e-43
Identity = 92/119 (77.31%), Postives = 101/119 (84.87%), Query Frame = 0 

Query: 1   MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNK 60
           MSGVW+FD GVIRLVER G+ ET    G GG      RRKVL+YTPTNE MTSY VLKNK
Sbjct: 1   MSGVWVFDNGVIRLVERAGAAET----GAGG------RRKVLIYTPTNEAMTSYPVLKNK 60

Query: 61  LSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARHLYDIVVRNRNLFQVKDMQS 120
           L+SLGWEVYYEDSEV+QFHKP SVDLIS+P DFNK+KARHLYDIVV+NRN+FQVKDMQS
Sbjct: 61  LASLGWEVYYEDSEVMQFHKPSSVDLISVPTDFNKLKARHLYDIVVKNRNVFQVKDMQS 109

[Close]
BLAST of Sed0002275 vs. ExPASy TrEMBL
Match: A0A6J1IC95 (flowering-promoting factor 1-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111472346 PE=3 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.9e-38
Identity = 85/119 (71.43%), Postives = 93/119 (78.15%), Query Frame = 0 

Query: 1   MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNK 60
           MSGVW+FD GVIRL           AEGGGGS    R R VL+YT TNE MT+  VLKNK
Sbjct: 1   MSGVWVFDNGVIRL-----------AEGGGGSRN--RGRNVLIYTATNEAMTTLTVLKNK 60

Query: 61  LSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARHLYDIVVRNRNLFQVKDMQS 120
           L SLGWE+YYED+E+VQFHKP SVDLISLP DFNK+KARHLYD+VVRNRNLF VKDMQS
Sbjct: 61  LLSLGWEIYYEDAEIVQFHKPSSVDLISLPTDFNKVKARHLYDVVVRNRNLFHVKDMQS 106

[Close]
BLAST of Sed0002275 vs. TAIR 10
Match: AT5G10625.1 (BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 120.6 bits (301), Expect = 8.9e-28
Identity = 62/117 (52.99%), Postives = 82/117 (70.09%), Query Frame = 0 

Query: 1   MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNK 60
           MSGVW+F+ GVIRLVE P        + GG S+ S  RR VLVY PT E ++SY+ L+  
Sbjct: 1   MSGVWVFNNGVIRLVENPN-------QSGGVSTQSHGRRNVLVYLPTGEAVSSYSSLEQI 60

Query: 61  LSSLGWEVYYE-DSEVVQFHKPCSVDLISLPIDFNKIKARHLYDIVVRNRNLFQVKD 117
           L SLGWE Y+  DS+++Q+HK  S+DLISLP DF+K  + ++YDIVV+N N F V+D
Sbjct: 61  LRSLGWERYFSGDSDLIQYHKRSSIDLISLPRDFSKFNSVYMYDIVVKNPNSFHVRD 110

[Close]
BLAST of Sed0002275 vs. TAIR 10
Match: AT4G31380.1 (FPF1-like protein 1 )

HSP 1 Score: 115.5 bits (288), Expect = 2.9e-26
Identity = 59/124 (47.58%), Postives = 85/124 (68.55%), Query Frame = 0 

Query: 1   MSGVWIFDK-GVIRLVERP---GSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAV 60
           MSGVW+F+K GV+RLVE P    + +++ +   GG+     RRK+LV+ P++E ++SY  
Sbjct: 58  MSGVWVFNKNGVMRLVENPYNQSAGDSSESSSSGGNQQQRMRRKILVHLPSSEVVSSYGS 117

Query: 61  LKNKLSSLGWEVYY---EDSEVVQFHKPCSVDLISLPIDFNKIKARHLYDIVVRNRNLFQ 118
           L+  L +LGWE YY       ++QFHK  S+DLISLP DF+K  + H+YDIVV+N N+F 
Sbjct: 118 LEKILKNLGWERYYSGDNTDHLLQFHKRTSIDLISLPRDFSKFNSIHMYDIVVKNPNVFH 177

[Close]
BLAST of Sed0002275 vs. TAIR 10
Match: AT5G24860.1 (flowering promoting factor 1 )

HSP 1 Score: 115.2 bits (287), Expect = 3.7e-26
Identity = 59/118 (50.00%), Postives = 77/118 (65.25%), Query Frame = 0 

Query: 1   MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNK 60
           MSGVW+F  GVIRLVE P              S +  RRKV+VY PT E ++SY+ L+  
Sbjct: 1   MSGVWVFKNGVIRLVENPNQ----------SGSDTQNRRKVMVYLPTGEVVSSYSTLEQI 60

Query: 61  LSSLGWEVYY--EDSEVVQFHKPCSVDLISLPIDFNKIKARHLYDIVVRNRNLFQVKD 117
           L SLGWE Y+   D++++QFHK  S+DLISLP DF K  + ++YDIVV+N N F V+D
Sbjct: 61  LQSLGWERYFGGGDTDLLQFHKRSSIDLISLPRDFTKFNSVYMYDIVVKNPNYFHVRD 108

The following BLAST results are available for this feature:
BLAST of Sed0002275 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0049489.12.0e-4579.17flowering-promoting factor 1-like protein 3 [Cucumis melo var. makuwa] >TYK09613... [more]
KGN57101.12.9e-4477.50hypothetical protein Csa_010574 [Cucumis sativus][more]
XP_022979994.18.3e-4478.15flowering-promoting factor 1-like protein 1 [Cucurbita maxima][more]
XP_022956217.14.1e-4377.31flowering-promoting factor 1-like protein 1 [Cucurbita moschata] >KAG6582219.1 F... [more]
XP_023528953.12.0e-4275.63flowering-promoting factor 1-like protein 1 [Cucurbita pepo subsp. pepo][more]
BLAST of Sed0002275 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q0E1D71.5e-2750.86Flowering-promoting factor 1-like protein 3 OS=Oryza sativa subsp. japonica OX=3... [more]
Q9LGE37.4e-2750.86Flowering-promoting factor 1-like protein 1 OS=Oryza sativa subsp. japonica OX=3... [more]
Q9LXB51.3e-2652.99Flowering-promoting factor 1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=F... [more]
Q8LR632.8e-2648.82Flowering-promoting factor 1-like protein 2 OS=Oryza sativa subsp. japonica OX=3... [more]
Q5Q0B34.0e-2547.58Flowering-promoting factor 1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=F... [more]
BLAST of Sed0002275 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7U7L79.6e-4679.17Flowering-promoting factor 1-like protein 3 OS=Cucumis melo var. makuwa OX=11946... [more]
A0A0A0LAK61.4e-4477.50Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G153750 PE=3 SV=1[more]
A0A6J1IY484.0e-4478.15flowering-promoting factor 1-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A6J1GVQ42.0e-4377.31flowering-promoting factor 1-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC... [more]
A0A6J1IC951.9e-3871.43flowering-promoting factor 1-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
BLAST of Sed0002275 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G10625.18.9e-2852.99BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:A... [more]
AT4G31380.12.9e-2647.58FPF1-like protein 1 [more]
AT5G24860.13.7e-2650.00flowering promoting factor 1 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039274Flowering-promoting factor 1PANTHERPTHR33433FLOWERING-PROMOTING FACTOR 1-LIKE PROTEIN 1coord: 1..117
NoneNo IPR availablePANTHERPTHR33433:SF6FLOWERING-PROMOTING FACTOR 1-LIKE PROTEIN 2coord: 1..117

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0002275.1Sed0002275.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009909 regulation of flower development