Sed0002257 (gene) Chayote v1

Overview


Name	Sed0002257
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Transmembrane protein
Location	LG04: 44516081 .. 44516892 (+)
RNA-Seq Expression	Sed0002257
Synteny	Sed0002257

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCATTTTTGTTCCTCGCTGTTCCCTTTCAGTTACCCTTTTCTTCATAAAATCTCTTCGATTTCATAATCCATGAACGAAACCCACAAAAATTCATCCATCATGGACTCAAAACACTCCCACCCACTTCACCAAATCGCCCAAAATCCAACCCACAAGCTCCTCCTCAAGCAATGGCTCAAAGAAGAAGAACTCATCTTCAACCGAATCTCCCTCAAAGAAACCCAAATCGATTCCGTCCAGAAACAGATCACAATGCTCCACATTTTCTTCTTCGTGTTCCACTCCACGTCGATACTCCTCCTCTTCAACGCCTCGGCCAAGGGCTTCGATGGCGCTGCGGCGTGCAAGCGGTCGTGGATCCCCTCGCTCTGTTCTCTGTTTTTCTCGCTGGGGATCATCTGGGCGGTCCGGTACAAGACCGACATGGAGGCACATTTGGAGAAGTTGCTGGAGAGGGAAAAGGAGGATCGGAATCTGCTGTCGAGGTGCGTCGATGAATTGAAGAGGAAAGGGGTTGAGTTCGATCTGTTGAAGGAGGTCGATGCGCTGCGGCGGGCGAAGAGCTTGCGGGTTGAAGGTAAGGCCGTGAGGAAATGGTCGTCTAGAGATTTTGTTACTCTGTTTTTGGTCTCTGTTTCGTGTGTGTTTCTTGGGGTTATTAGGATTGTTGTGTGTAATAAGTGAAAAGGGGGTGTTTTTATATAAATGGGATTAGGCATTTTTGTGATGCCAGGGATTTTGTTGTTGTTGTTGTTCTCTCTGCACTTGCTTTTTGTTGATTTGTTGGTGTTATTTGGATTAAATGGCTA

mRNA sequence

CTCCATTTTTGTTCCTCGCTGTTCCCTTTCAGTTACCCTTTTCTTCATAAAATCTCTTCGATTTCATAATCCATGAACGAAACCCACAAAAATTCATCCATCATGGACTCAAAACACTCCCACCCACTTCACCAAATCGCCCAAAATCCAACCCACAAGCTCCTCCTCAAGCAATGGCTCAAAGAAGAAGAACTCATCTTCAACCGAATCTCCCTCAAAGAAACCCAAATCGATTCCGTCCAGAAACAGATCACAATGCTCCACATTTTCTTCTTCGTGTTCCACTCCACGTCGATACTCCTCCTCTTCAACGCCTCGGCCAAGGGCTTCGATGGCGCTGCGGCGTGCAAGCGGTCGTGGATCCCCTCGCTCTGTTCTCTGTTTTTCTCGCTGGGGATCATCTGGGCGGTCCGGTACAAGACCGACATGGAGGCACATTTGGAGAAGTTGCTGGAGAGGGAAAAGGAGGATCGGAATCTGCTGTCGAGGTGCGTCGATGAATTGAAGAGGAAAGGGGTTGAGTTCGATCTGTTGAAGGAGGTCGATGCGCTGCGGCGGGCGAAGAGCTTGCGGGTTGAAGGTAAGGCCGTGAGGAAATGGTCGTCTAGAGATTTTGTTACTCTGTTTTTGGTCTCTGTTTCGTGTGTGTTTCTTGGGGTTATTAGGATTGTTGTGTGTAATAAGTGAAAAGGGGGTGTTTTTATATAAATGGGATTAGGCATTTTTGTGATGCCAGGGATTTTGTTGTTGTTGTTGTTCTCTCTGCACTTGCTTTTTGTTGATTTGTTGGTGTTATTTGGATTAAATGGCTA

Coding sequence (CDS)

ATGAACGAAACCCACAAAAATTCATCCATCATGGACTCAAAACACTCCCACCCACTTCACCAAATCGCCCAAAATCCAACCCACAAGCTCCTCCTCAAGCAATGGCTCAAAGAAGAAGAACTCATCTTCAACCGAATCTCCCTCAAAGAAACCCAAATCGATTCCGTCCAGAAACAGATCACAATGCTCCACATTTTCTTCTTCGTGTTCCACTCCACGTCGATACTCCTCCTCTTCAACGCCTCGGCCAAGGGCTTCGATGGCGCTGCGGCGTGCAAGCGGTCGTGGATCCCCTCGCTCTGTTCTCTGTTTTTCTCGCTGGGGATCATCTGGGCGGTCCGGTACAAGACCGACATGGAGGCACATTTGGAGAAGTTGCTGGAGAGGGAAAAGGAGGATCGGAATCTGCTGTCGAGGTGCGTCGATGAATTGAAGAGGAAAGGGGTTGAGTTCGATCTGTTGAAGGAGGTCGATGCGCTGCGGCGGGCGAAGAGCTTGCGGGTTGAAGGTAAGGCCGTGAGGAAATGGTCGTCTAGAGATTTTGTTACTCTGTTTTTGGTCTCTGTTTCGTGTGTGTTTCTTGGGGTTATTAGGATTGTTGTGTGTAATAAGTGA

Protein sequence

MNETHKNSSIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQITMLHIFFFVFHSTSILLLFNASAKGFDGAAACKRSWIPSLCSLFFSLGIIWAVRYKTDMEAHLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSRDFVTLFLVSVSCVFLGVIRIVVCNK

Homology

[Close]

BLAST of Sed0002257 vs. NCBI nr
Match: KAG7023009.1 (hypothetical protein SDJN02_16745, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 336.3 bits (861), Expect = 1.9e-88
Identity = 174/205 (84.88%), Postives = 191/205 (93.17%), Query Frame = 0


Query: 1   MNETHKNS-SIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQ 60
           MN+ +  S SIM+SK SHPLHQIA+ PTHKLLLKQWLKEEELIF R+SLKETQIDSV+K+
Sbjct: 1   MNDNNNRSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKE 60

Query: 61  ITMLHIFFFVFHSTSILLLFNASAKGFDGAAACKRSWIPSLCSLFFSLGIIWAVRYKTDM 120
           ITMLHIFFFVFHSTSILLLFNASAK F+G AAC RSWIPS+CSL FSLGIIWAVRYKTD+
Sbjct: 61  ITMLHIFFFVFHSTSILLLFNASAKDFNG-AACNRSWIPSICSLLFSLGIIWAVRYKTDL 120

Query: 121 EAHLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSR 180
           EAHLEKLLEREKEDRNLLS+CV+ELKRKGVEFDLLKEVDALRRAKSLRVE KAVRKWSSR
Sbjct: 121 EAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSR 180

Query: 181 DFVTLFLVSVSCVFLGVIRIVVCNK 205
           DF+TLF  SVSC+FLG+IRIV+C+K
Sbjct: 181 DFMTLFFFSVSCMFLGIIRIVLCDK 204

[Close]

BLAST of Sed0002257 vs. NCBI nr
Match: XP_023529232.1 (uncharacterized protein LOC111792131 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 336.3 bits (861), Expect = 1.9e-88
Identity = 172/203 (84.73%), Postives = 190/203 (93.60%), Query Frame = 0


Query: 2   NETHKNSSIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQIT 61
           +  +K+ SIM+SK SHPLHQIA+ PTHKLLLKQWLKEEELIF R+SLKETQIDSV+K+IT
Sbjct: 3   DNNNKSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKEIT 62

Query: 62  MLHIFFFVFHSTSILLLFNASAKGFDGAAACKRSWIPSLCSLFFSLGIIWAVRYKTDMEA 121
           MLHIFFFVFHSTSILLLFNASAK F+G AAC RSWIPS+CSL FSLGIIWAVRYKTD+EA
Sbjct: 63  MLHIFFFVFHSTSILLLFNASAKDFNG-AACNRSWIPSICSLLFSLGIIWAVRYKTDLEA 122

Query: 122 HLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSRDF 181
           HLEKLLEREKEDRNLLS+CV+ELKRKGVEFDLLKEVDALRRAKSLRVE KAVRKWSSRDF
Sbjct: 123 HLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSRDF 182

Query: 182 VTLFLVSVSCVFLGVIRIVVCNK 205
           +TLF  SVSC+FLG+IRIV+C+K
Sbjct: 183 MTLFFFSVSCMFLGIIRIVLCDK 204

[Close]

BLAST of Sed0002257 vs. NCBI nr
Match: XP_022930642.1 (uncharacterized protein LOC111437043 [Cucurbita moschata])

HSP 1 Score: 333.2 bits (853), Expect = 1.6e-87
Identity = 172/205 (83.90%), Postives = 190/205 (92.68%), Query Frame = 0


Query: 1   MNETHKNS-SIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQ 60
           MN+ +  S SIM+SK SHPLHQIA+ PTHKLLLKQWLKEEELIF R+SLKETQIDSV+K+
Sbjct: 1   MNDNNNRSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKE 60

Query: 61  ITMLHIFFFVFHSTSILLLFNASAKGFDGAAACKRSWIPSLCSLFFSLGIIWAVRYKTDM 120
           ITMLHIFFFVFHSTSILLLFNAS K F+G AAC RSWIPS+CSL FSLGIIWAVRYKT++
Sbjct: 61  ITMLHIFFFVFHSTSILLLFNASTKDFNG-AACNRSWIPSICSLLFSLGIIWAVRYKTEL 120

Query: 121 EAHLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSR 180
           EAHLEKLLEREKEDRNLLS+CV+ELKRKGVEFDLLKEVDALRRAKSLRVE KAVRKWSSR
Sbjct: 121 EAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSR 180

Query: 181 DFVTLFLVSVSCVFLGVIRIVVCNK 205
           DF+TLF  SVSC+FLG+IRIV+C+K
Sbjct: 181 DFMTLFFFSVSCMFLGIIRIVLCDK 204

[Close]

BLAST of Sed0002257 vs. NCBI nr
Match: XP_022147912.1 (uncharacterized protein LOC111016728 [Momordica charantia])

HSP 1 Score: 332.8 bits (852), Expect = 2.1e-87
Identity = 172/204 (84.31%), Postives = 185/204 (90.69%), Query Frame = 0


Query: 1   MNETHKNSSIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQI 60
           M+E     +IM+SK  HPLHQIA+NPTHKLLLKQWLKEEELIF RISLKETQIDSV+K+I
Sbjct: 1   MDENKTALTIMESKPPHPLHQIAENPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEI 60

Query: 61  TMLHIFFFVFHSTSILLLFNASAKGFDGAAACKRSWIPSLCSLFFSLGIIWAVRYKTDME 120
           TMLHI FFVFHST+ILLLFNAS K   G AACKRSWIPSLCSL FSLGIIWAVRYKTD+E
Sbjct: 61  TMLHILFFVFHSTAILLLFNASTKDVHG-AACKRSWIPSLCSLLFSLGIIWAVRYKTDVE 120

Query: 121 AHLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSRD 180
           AHLEKLLEREKEDRNLLS+CVDELKRKGVEFDLLKEVDALRRAKSLRVE KAVRKWSSRD
Sbjct: 121 AHLEKLLEREKEDRNLLSKCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVRKWSSRD 180

Query: 181 FVTLFLVSVSCVFLGVIRIVVCNK 205
           F+TLF  SVSC+FLG+ RIV+CNK
Sbjct: 181 FITLFFFSVSCIFLGITRIVLCNK 203

[Close]

BLAST of Sed0002257 vs. NCBI nr
Match: XP_008447121.1 (PREDICTED: uncharacterized protein LOC103489644 [Cucumis melo] >KAA0051100.1 putative transmembrane protein [Cucumis melo var. makuwa] >TYK02689.1 putative transmembrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 332.4 bits (851), Expect = 2.7e-87
Identity = 171/202 (84.65%), Postives = 185/202 (91.58%), Query Frame = 0


Query: 2   NETHKNSSIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQIT 61
           +  +K  SIM+ K SHPLHQIA+ PTHKLLLKQWLKEEELIF RISLKETQIDSV+K+IT
Sbjct: 3   DSNNKALSIMEPKPSHPLHQIAETPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEIT 62

Query: 62  MLHIFFFVFHSTSILLLFNASAKGFDGAAACKRSWIPSLCSLFFSLGIIWAVRYKTDMEA 121
           MLHIFFFVFHST+ILLLFNAS K F G  ACKRSWIPSLCSL FSLGIIWAVRYKTD+EA
Sbjct: 63  MLHIFFFVFHSTAILLLFNASTKDFHG-VACKRSWIPSLCSLLFSLGIIWAVRYKTDVEA 122

Query: 122 HLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSRDF 181
           HLEKLLEREKEDRNLLS+CVDELKRKG+EFDLLKEVDALRRAKSLRVE KAVRKWSSRDF
Sbjct: 123 HLEKLLEREKEDRNLLSKCVDELKRKGIEFDLLKEVDALRRAKSLRVEAKAVRKWSSRDF 182

Query: 182 VTLFLVSVSCVFLGVIRIVVCN 204
           +TLF  SVSC+FLGVIR+V+CN
Sbjct: 183 ITLFFFSVSCMFLGVIRVVLCN 203

[Close]

BLAST of Sed0002257 vs. ExPASy TrEMBL
Match: A0A6J1ER49 (uncharacterized protein LOC111437043 OS=Cucurbita moschata OX=3662 GN=LOC111437043 PE=4 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 7.7e-88
Identity = 172/205 (83.90%), Postives = 190/205 (92.68%), Query Frame = 0


Query: 1   MNETHKNS-SIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQ 60
           MN+ +  S SIM+SK SHPLHQIA+ PTHKLLLKQWLKEEELIF R+SLKETQIDSV+K+
Sbjct: 1   MNDNNNRSLSIMESKPSHPLHQIAKTPTHKLLLKQWLKEEELIFGRVSLKETQIDSVRKE 60

Query: 61  ITMLHIFFFVFHSTSILLLFNASAKGFDGAAACKRSWIPSLCSLFFSLGIIWAVRYKTDM 120
           ITMLHIFFFVFHSTSILLLFNAS K F+G AAC RSWIPS+CSL FSLGIIWAVRYKT++
Sbjct: 61  ITMLHIFFFVFHSTSILLLFNASTKDFNG-AACNRSWIPSICSLLFSLGIIWAVRYKTEL 120

Query: 121 EAHLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSR 180
           EAHLEKLLEREKEDRNLLS+CV+ELKRKGVEFDLLKEVDALRRAKSLRVE KAVRKWSSR
Sbjct: 121 EAHLEKLLEREKEDRNLLSKCVEELKRKGVEFDLLKEVDALRRAKSLRVESKAVRKWSSR 180

Query: 181 DFVTLFLVSVSCVFLGVIRIVVCNK 205
           DF+TLF  SVSC+FLG+IRIV+C+K
Sbjct: 181 DFMTLFFFSVSCMFLGIIRIVLCDK 204

[Close]

BLAST of Sed0002257 vs. ExPASy TrEMBL
Match: A0A6J1D3M6 (uncharacterized protein LOC111016728 OS=Momordica charantia OX=3673 GN=LOC111016728 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 1.0e-87
Identity = 172/204 (84.31%), Postives = 185/204 (90.69%), Query Frame = 0


Query: 1   MNETHKNSSIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQI 60
           M+E     +IM+SK  HPLHQIA+NPTHKLLLKQWLKEEELIF RISLKETQIDSV+K+I
Sbjct: 1   MDENKTALTIMESKPPHPLHQIAENPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEI 60

Query: 61  TMLHIFFFVFHSTSILLLFNASAKGFDGAAACKRSWIPSLCSLFFSLGIIWAVRYKTDME 120
           TMLHI FFVFHST+ILLLFNAS K   G AACKRSWIPSLCSL FSLGIIWAVRYKTD+E
Sbjct: 61  TMLHILFFVFHSTAILLLFNASTKDVHG-AACKRSWIPSLCSLLFSLGIIWAVRYKTDVE 120

Query: 121 AHLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSRD 180
           AHLEKLLEREKEDRNLLS+CVDELKRKGVEFDLLKEVDALRRAKSLRVE KAVRKWSSRD
Sbjct: 121 AHLEKLLEREKEDRNLLSKCVDELKRKGVEFDLLKEVDALRRAKSLRVEAKAVRKWSSRD 180

Query: 181 FVTLFLVSVSCVFLGVIRIVVCNK 205
           F+TLF  SVSC+FLG+ RIV+CNK
Sbjct: 181 FITLFFFSVSCIFLGITRIVLCNK 203

[Close]

BLAST of Sed0002257 vs. ExPASy TrEMBL
Match: A0A5A7U7C4 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1161G00150 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 1.3e-87
Identity = 171/202 (84.65%), Postives = 185/202 (91.58%), Query Frame = 0


Query: 2   NETHKNSSIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQIT 61
           +  +K  SIM+ K SHPLHQIA+ PTHKLLLKQWLKEEELIF RISLKETQIDSV+K+IT
Sbjct: 3   DSNNKALSIMEPKPSHPLHQIAETPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEIT 62

Query: 62  MLHIFFFVFHSTSILLLFNASAKGFDGAAACKRSWIPSLCSLFFSLGIIWAVRYKTDMEA 121
           MLHIFFFVFHST+ILLLFNAS K F G  ACKRSWIPSLCSL FSLGIIWAVRYKTD+EA
Sbjct: 63  MLHIFFFVFHSTAILLLFNASTKDFHG-VACKRSWIPSLCSLLFSLGIIWAVRYKTDVEA 122

Query: 122 HLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSRDF 181
           HLEKLLEREKEDRNLLS+CVDELKRKG+EFDLLKEVDALRRAKSLRVE KAVRKWSSRDF
Sbjct: 123 HLEKLLEREKEDRNLLSKCVDELKRKGIEFDLLKEVDALRRAKSLRVEAKAVRKWSSRDF 182

Query: 182 VTLFLVSVSCVFLGVIRIVVCN 204
           +TLF  SVSC+FLGVIR+V+CN
Sbjct: 183 ITLFFFSVSCMFLGVIRVVLCN 203

[Close]

BLAST of Sed0002257 vs. ExPASy TrEMBL
Match: A0A1S3BHA3 (uncharacterized protein LOC103489644 OS=Cucumis melo OX=3656 GN=LOC103489644 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 1.3e-87
Identity = 171/202 (84.65%), Postives = 185/202 (91.58%), Query Frame = 0


Query: 2   NETHKNSSIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQIT 61
           +  +K  SIM+ K SHPLHQIA+ PTHKLLLKQWLKEEELIF RISLKETQIDSV+K+IT
Sbjct: 3   DSNNKALSIMEPKPSHPLHQIAETPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEIT 62

Query: 62  MLHIFFFVFHSTSILLLFNASAKGFDGAAACKRSWIPSLCSLFFSLGIIWAVRYKTDMEA 121
           MLHIFFFVFHST+ILLLFNAS K F G  ACKRSWIPSLCSL FSLGIIWAVRYKTD+EA
Sbjct: 63  MLHIFFFVFHSTAILLLFNASTKDFHG-VACKRSWIPSLCSLLFSLGIIWAVRYKTDVEA 122

Query: 122 HLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSRDF 181
           HLEKLLEREKEDRNLLS+CVDELKRKG+EFDLLKEVDALRRAKSLRVE KAVRKWSSRDF
Sbjct: 123 HLEKLLEREKEDRNLLSKCVDELKRKGIEFDLLKEVDALRRAKSLRVEAKAVRKWSSRDF 182

Query: 182 VTLFLVSVSCVFLGVIRIVVCN 204
           +TLF  SVSC+FLGVIR+V+CN
Sbjct: 183 ITLFFFSVSCMFLGVIRVVLCN 203

[Close]

BLAST of Sed0002257 vs. ExPASy TrEMBL
Match: A0A0A0K424 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G237880 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.9e-87
Identity = 169/202 (83.66%), Postives = 185/202 (91.58%), Query Frame = 0


Query: 2   NETHKNSSIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQIT 61
           +  +K  S+M+ K SHPLHQIA+ PTHKLLLKQWLKEEELIF RISLKETQIDSV+K+IT
Sbjct: 3   DSNNKALSLMEPKPSHPLHQIAETPTHKLLLKQWLKEEELIFGRISLKETQIDSVRKEIT 62

Query: 62  MLHIFFFVFHSTSILLLFNASAKGFDGAAACKRSWIPSLCSLFFSLGIIWAVRYKTDMEA 121
           MLHIFFFVFHST+ILLLFNAS K F G  ACKRSWIPSLCSL FSLGIIWAVRYKTD+EA
Sbjct: 63  MLHIFFFVFHSTAILLLFNASTKDFHG-VACKRSWIPSLCSLLFSLGIIWAVRYKTDVEA 122

Query: 122 HLEKLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSRDF 181
           HLEKLLEREKEDRNLLS+CVDELKRKG+EFDLLKEVDALRRAKSLRVE KAVRKWSSRDF
Sbjct: 123 HLEKLLEREKEDRNLLSKCVDELKRKGIEFDLLKEVDALRRAKSLRVEAKAVRKWSSRDF 182

Query: 182 VTLFLVSVSCVFLGVIRIVVCN 204
           +TLF  SVSC+FLG+IR+V+CN
Sbjct: 183 ITLFFFSVSCMFLGIIRVVLCN 203

[Close]

BLAST of Sed0002257 vs. TAIR 10
Match: AT3G12870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G56120.1); Has 70 Blast hits to 70 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 278.5 bits (711), Expect = 4.3e-75
Identity = 140/199 (70.35%), Postives = 171/199 (85.93%), Query Frame = 0


Query: 7   NSSIMDSKHSHPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQITMLHIF 66
           N  IM++K  HPLHQIA  PTHKLLLKQWLKEEELI +R+S KE+QIDSV+++IT L+IF
Sbjct: 8   NPPIMEAKTRHPLHQIADTPTHKLLLKQWLKEEELILSRVSHKESQIDSVRREITQLYIF 67

Query: 67  FFVFHSTSILLLFNASAKGFDGA--AACKRSWIPSLCSLFFSLGIIWAVRYKTDMEAHLE 126
           FF+FHS S+LLLF+AS+     A  +ACKRSWIPSLC+L  SLGIIWAVRYK+++E+HLE
Sbjct: 68  FFLFHSISLLLLFHASSSSSSSASSSACKRSWIPSLCALLSSLGIIWAVRYKSEVESHLE 127

Query: 127 KLLEREKEDRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGKAVRKWSSRDFVTL 186
           KLLEREKED  LL +CV+ELK+KG+EFDLLKEVDALRRAKSLRVE K V+KWS+RDFVTL
Sbjct: 128 KLLEREKEDAKLLRKCVEELKKKGIEFDLLKEVDALRRAKSLRVESKPVKKWSARDFVTL 187

Query: 187 FLVSVSCVFLGVIRIVVCN 204
           F  SVSC+ L +IR+++C+
Sbjct: 188 FFFSVSCLVLAMIRLILCD 206

[Close]

BLAST of Sed0002257 vs. TAIR 10
Match: AT5G56120.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G12870.1); Has 77 Blast hits to 75 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 112.5 bits (280), Expect = 4.1e-25
Identity = 71/191 (37.17%), Postives = 113/191 (59.16%), Query Frame = 0


Query: 17  HPLHQIAQNPTHKLLLKQWLKEEELIFNRISLKETQIDSVQKQITMLHIFFFVFHSTSIL 76
           HPL +I+++P H LLLK W +EE+L   R+ LKE++++S++++I  L  FF VFH     
Sbjct: 44  HPLSEISESPGHLLLLKLWQREEDLFCRRVLLKESRLESIKREIFQLCCFFLVFHGFFFT 103

Query: 77  LLFNAS----AKGFDGAAACKRSWIPSLCSLFFSLGIIWAVRYKTDMEAHLEKLLEREKE 136
           L++++S    A      A CK+ WIPS  SL  SL +++ V+ K  +   + + + RE+ 
Sbjct: 104 LVYSSSCSDDADVVKSNAVCKKWWIPSAVSLATSLVLVFLVQAKLFVFWKVYRGVNRERN 163

Query: 137 DRNLLSRCVDELKRKGVEFDLLKEVDALRRAKSLRVEGK-AVRKWSSRDFVTLFLVSVSC 196
           D   L+RCV EL+ KG  FDL KE  + +R KS  VE K     W S+  +T+ L+  + 
Sbjct: 164 DNRTLTRCVLELRMKGSSFDLSKEPMSGKRMKSSSVEIKWKPVTWFSQYLITIVLLCSAG 223

Query: 197 VFLGVIRIVVC 203
           +F  V + ++C
Sbjct: 224 LFFPVSKFILC 234

The following BLAST results are available for this feature:

BLAST of Sed0002257 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023009.1	1.9e-88	84.88	hypothetical protein SDJN02_16745, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023529232.1	1.9e-88	84.73	uncharacterized protein LOC111792131 [Cucurbita pepo subsp. pepo]	[more]
XP_022930642.1	1.6e-87	83.90	uncharacterized protein LOC111437043 [Cucurbita moschata]	[more]
XP_022147912.1	2.1e-87	84.31	uncharacterized protein LOC111016728 [Momordica charantia]	[more]
XP_008447121.1	2.7e-87	84.65	PREDICTED: uncharacterized protein LOC103489644 [Cucumis melo] >KAA0051100.1 put...	[more]

BLAST of Sed0002257 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0002257 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ER49	7.7e-88	83.90	uncharacterized protein LOC111437043 OS=Cucurbita moschata OX=3662 GN=LOC1114370...	[more]
A0A6J1D3M6	1.0e-87	84.31	uncharacterized protein LOC111016728 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A5A7U7C4	1.3e-87	84.65	Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3BHA3	1.3e-87	84.65	uncharacterized protein LOC103489644 OS=Cucumis melo OX=3656 GN=LOC103489644 PE=...	[more]
A0A0A0K424	2.9e-87	83.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G237880 PE=4 SV=1	[more]

BLAST of Sed0002257 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12870.1	4.3e-75	70.35	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G56120.1	4.1e-25	37.17	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 127..147
None	No IPR available	COILS	Coil	Coil	coord: 202..204
None	No IPR available	PANTHER	PTHR33287	OS03G0453550 PROTEIN	coord: 6..203
None	No IPR available	PANTHER	PTHR33287:SF10	BNAA01G30280D PROTEIN	coord: 6..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002257.1	Sed0002257.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane