Sed0002251 (gene) Chayote v1

Overview


Name	Sed0002251
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RanBP2-type zinc finger protein
Location	LG04: 2155994 .. 2160418 (-)
RNA-Seq Expression	Sed0002251
Synteny	Sed0002251

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGGCTCATTCGCGCTACAAAACCGCGGGCGGCTATTTCACCGACGTGTATCGCCGTTCCCGATCGGAAAATTGTTTCTCTCAGCCATTCCGAGTTCAAGAACAAGATCTCATCGTTATCATCTTCGTCTTTCCGATCGGCAACAACATGTCTCAGGTACGTTTTCTCGCACAATTGTCTCGTTAATTCTTCAGATCTTTGTTTTTCTCAAAAAAACTTGACTTATGGCTTCCATAAACCCTAGAAATTCTTTGTTGGTTACTCGTTGTGGATGAATGAATGCTTATTTGCACTTCATATTTGTTCAAGTTATTGAATTAGAATTGTATTGGCCTCTGGGTGATTTTTTTATTCTGTTCGATCTATCTATGGTCGCATTGTTTTCTCTCTATGTTTCCGTGCGATTGCTATGTGTTGGATTCAGGCAGAAATTGCGCGATACTGCTGTAGAATTTGAAGTTTGAGATTCGCATATTAGATTTCTAGGTTTTGAATTGATGCATTGTTTGTGCAGGTTGATAGCAGGAATTCATCTGCAGCCAAACGTGCTAGAACTGATGGTATGTACAGGCATCATTGTTTCCTTTGTAATTCAATTACAGCTTCATATTTGATCATGCATTCTTTCAGAATCACAACTACGTTGGATAAGTTTACTGTTTAGATTTTGGAATGAATGCTTATGGCATACTAATTCGAGATTTCCAGTATTCAACATTCTTATGCTGTTAATTACGTCTTTTTCTTACTGTCTTTTTGTCTCTAATAATTGTTTTTACTCGCGTTTAGTTTAGTCTACAAGCCAGCATGTTACAAAGATTCAGCTCCACTGTATAGGTCTGTTTATTAGATTATTTGTTTGTAGGTAGCCGAAGGGAAGACGACTGGACTTGTCCTAGCTGTGGAAACGTCAATTTTTCATTTAGAACAACTTGCAATATGCGCAACTGTACTCAGTCGCGTCCTGCTGATCATAATTTTGTAAGTTATGAATGATGCCCGCTCCTAATGAAAATAAAGTTAATCACACATTTGTTGATTTGCAAAACCTAATTTTGTTGTCTCTTGCAATTGTAGTTAATTAATTTTCATGCGTTTTCCTCTCAGTTCATCTCAGTGCTGTGTTTTTTTTAAAATCTAACTCAAATTTTTTTATGCCCAATCTGTGATCAAGAAATGCTCATAACATTACTTTTACGTTCATCAAATTTTTTTTAATGCACATCTAGTTTACTTTTTTCTTTTGGCAAGGCTTATCCGGAGTTCTATTGTTCGGATTTTTCATAAATATGTTTTGCATTTTTAGGTAGTAATAATTACTTTTCACTTTTTATTTCGCGTTTTAGGTGGTAACTATGCTATCTTCAAGTTATGTTTGTAATTATGATATTTGTTTATTTGTTCATTTTTTCAGTTACTTATAACATCCCTGGGCTAGTTCCGTTTCCTGTACACCTCTTATATGTTTCTCTTATAGAAGAAACATTGGTTTATGTCCCCAAGTGGTGGCACATGGTTGAAGACCTTGGCTTTGAAGGTATTCTCCCCTCAAGGTCTCAGGTTCGAGACCCACCTGTGATATTACTCATTCGATGTATCTCAGTGTCTGGCTTAGGGGGGACGGCCGTGGTTACCCTTGTTTCAAAAAAAAAAAAGAAACATTGGTTTATGAACCCATCACCACCACTAACGGCACTCAAAATTTGAATCCATGTTTTCTTGATAAACTAATAGCGTACCTGCGTCTTCTCTCTCTCTCTCTCTCCAGAAATCTGCTGCCAAGCCTGTTCAAGCACCACAGGGTTACTCCTATTCTGCCCCTTACTTGGGTTCCGGTGCACCCTCTTCAATGTATCCTGGTGTACCACCCTATGGTTCATCCATACCTCCTTATGATGTGCCATTTTCTGGGGGATCAGCATATCATTACAACTACGGAAGCCGGTATTCGGCCGGAAGCCCCTACAGATCTTTGCACCTATCTGGGCATGCACCCTATTCTAGTGGATCTATGATGGGAAATAGTATGTTCCGTTTCTATTCTGCCTTCATTTGTTTATGTTTTTTAATTACGACATCATGTCTTCCATGAGTAATGTATATCCAAAAAAAAAAAAAGAATTGGGTGCTCTGTTACTGTTGACCTATCCTCTATTTATCTTGTTTTCTTCTTGTTTTCATAGGTGCAGTGTATGGTATGCCACCAATTGTGGATCGTTATGGCAGGGCTTTGCCAATGGGCCCTGGCACCATGGTAAGATTTTTTACTGTTAATTATTATCCAGTGAGCAGTTTTTGTTTCTATAATTTTATGTTTGTTATACTCTTCGCTATAATCTTCGCTGAAACTACAATATTTAAACAACCTAACAGGGATTGACGATTAGATTGTATGGAAATATTGAGAAAATTAATTATTAGATCTTCATTTTCGATTAAATCTTCATTTGCAGAGATAAGAAACTAAAATAATCACATTACAATATTTATCTTAGTATGAATACCTGTTCTAAAAATGCATTAATTGATGTATTACACTTTTTTTTTATATATATTACTAAGAATATTAAAAAAACTACTAATTATTTATTTATTTGTTCAAAGAAGAGAACATCAGTTTCAAATTATTTCAAGGGAAATATATTTCCTATTGAAAAGGATGTTAAAACCATAATATTGAAAGCTTTTGGATATTAACGAATACGGAACATTTTTTTGGTTAAAGACTTGCCCCAACAGTTTTTATTTCCGAGTGAAGCTGTCCTGTATACCAACTACGTAGTTGACCGTTGAATCTAACTGGATGCATTTTCTATTTCTTGTGTTTACTCATATATTTTCTGTCTTTTATCTTTTTCATTTTCCATGTAAAATTTATGAGCTTATATATTTTCAGGGTCTACGGGCGGGCTTTTTTCAGGATGATATGTCTCAGAAGAAGGGTGCAGGTTGCCATTTTTTACTTGCCTGTTATCCGTTATGATGGAAACTTTTATCGTCTAATTTCTTACTTTTCATAACCCAGACACCACTCGTGACAATGATTGGCCGTGCCCGAAATGTGGAAACGTCAACTTCTCATTTAGAACAGTCTGTAACATGAGGAAATGCAATACACCAAAGCCTGGGTCACAGGTCGGTTAAGCTATCTTCTTAGGAGTGAATTAATTTTTGCGTTTACTTATCAAGACATTGTTGGCGAATGTCTTGTCGCTTTCAACAGATGTGATGAATGTCAAACTTCTGTCATGTATAAATCAATTTATATAGTCTTAACCTTTTCATTTATTTTGTGCATGAATTTCTGAAATTCAGGGTCCGAGAAATGACAAAAGTTCTAGTAAGTTGAACTTTCATAAGCTTCATGATTTCTGTCGGCCTTCGATAAGCTTTCATAATTTCTAATGCACTTGTCTATGCTGCCTTTCAGAACAAAAGAATCCGGAGGGTAGCTGGAAGTGTGAGAAATGCAACAACATAAACTATCCATTCCGAACCAAATGCAATAGACAAAATTGTGGAGCCGACAAGCCAGCGGACTCTGAGAAATCCCCATCATCGGCACAGGAGGAAAGTGATCAGGTCTGTTTTTCGAGTTTCTATATCTTTGCGTGTTGTTTGGAATTGGTTTTGTTCAGATATGTATGCCTTATGAACTGGATTTCATACAATTTGGTTAACAAGATAATTTATAAACCACTTGAAAAGAGGAGCTCTTTTGGTAAATTTTCCTCTTTATAGCATACCCAGTTGTTTGTTTGTTTGTTTTTTTTCTTTTTTTTTAAATTTTGTTTACCATTTCATGCATTAATTTGTCATTGTGTACTGTTCCAGTAAGGTCCAGAGTTATCTTCCAGCGTTGCTCAATATGGGTGTCTGAAAGTCGAAAGTCAGTCTTGTCGTCGTCCTCGTGTTGCAGCCGTTGTCAAGTCGGTCTACCTCTCTTGATCCGTGTCAAGTTGTATTAACTCAATTTTAGTTCTGGTCTTTTAAATCATTTAATGCGCCATATTATCAGCTGGATTGATCTGGCTAAAGATTTAATGGTTGGTTTCTGATATTCTGGGGACATTTACCTTTGGAATTCACTTGTTTAGTCTAGTGGGCCTATTAACTTATGCACTACAATAGACTGTGACCTATTGGGCTTGCGTTTTGATATCTTATTTGTCTTTGTGCTGCCTGCTTCTTTTGGGTGTGGTGCCTAACTGATCTTTTCTAGGACAGGGTCCCCCAAGTTTAAAGGACGCCTTGGATTAGACAGGATTTGCATTTGGGTTAAGCTTAGGGTTTTAGTCAATTACTTATTTGATGAGAACTTAGGCATGCTAAATGATGACCTATCTTTTAATGTCCACATATGTGATCCAATTTGGGCTATCTTTTAATCCAAAAATTAGAAAAATAATTTAAGAAAACAAAAT

mRNA sequence

TTTGGCTCATTCGCGCTACAAAACCGCGGGCGGCTATTTCACCGACGTGTATCGCCGTTCCCGATCGGAAAATTGTTTCTCTCAGCCATTCCGAGTTCAAGAACAAGATCTCATCGTTATCATCTTCGTCTTTCCGATCGGCAACAACATGTCTCAGGTTGATAGCAGGAATTCATCTGCAGCCAAACGTGCTAGAACTGATGGTAGCCGAAGGGAAGACGACTGGACTTGTCCTAGCTGTGGAAACGTCAATTTTTCATTTAGAACAACTTGCAATATGCGCAACTGTACTCAGTCGCGTCCTGCTGATCATAATTTTAAATCTGCTGCCAAGCCTGTTCAAGCACCACAGGGTTACTCCTATTCTGCCCCTTACTTGGGTTCCGGTGCACCCTCTTCAATGTATCCTGGTGTACCACCCTATGGTTCATCCATACCTCCTTATGATGTGCCATTTTCTGGGGGATCAGCATATCATTACAACTACGGAAGCCGGTATTCGGCCGGAAGCCCCTACAGATCTTTGCACCTATCTGGGCATGCACCCTATTCTAGTGGATCTATGATGGGAAATAGTGCAGTGTATGGTATGCCACCAATTGTGGATCGTTATGGCAGGGCTTTGCCAATGGGCCCTGGCACCATGGGTCTACGGGCGGGCTTTTTTCAGGATGATATGTCTCAGAAGAAGGGTGCAGACACCACTCGTGACAATGATTGGCCGTGCCCGAAATGTGGAAACGTCAACTTCTCATTTAGAACAGTCTGTAACATGAGGAAATGCAATACACCAAAGCCTGGGTCACAGGGTCCGAGAAATGACAAAAGTTCTAAACAAAAGAATCCGGAGGGTAGCTGGAAGTGTGAGAAATGCAACAACATAAACTATCCATTCCGAACCAAATGCAATAGACAAAATTGTGGAGCCGACAAGCCAGCGGACTCTGAGAAATCCCCATCATCGGCACAGGAGGAAAGTGATCAGTAAGGTCCAGAGTTATCTTCCAGCGTTGCTCAATATGGGTGTCTGAAAGTCGAAAGTCAGTCTTGTCGTCGTCCTCGTGTTGCAGCCGTTGTCAAGTCGGTCTACCTCTCTTGATCCGTGTCAAGTTGTATTAACTCAATTTTAGTTCTGGTCTTTTAAATCATTTAATGCGCCATATTATCAGCTGGATTGATCTGGCTAAAGATTTAATGGTTGGTTTCTGATATTCTGGGGACATTTACCTTTGGAATTCACTTGTTTAGTCTAGTGGGCCTATTAACTTATGCACTACAATAGACTGTGACCTATTGGGCTTGCGTTTTGATATCTTATTTGTCTTTGTGCTGCCTGCTTCTTTTGGGTGTGGTGCCTAACTGATCTTTTCTAGGACAGGGTCCCCCAAGTTTAAAGGACGCCTTGGATTAGACAGGATTTGCATTTGGGTTAAGCTTAGGGTTTTAGTCAATTACTTATTTGATGAGAACTTAGGCATGCTAAATGATGACCTATCTTTTAATGTCCACATATGTGATCCAATTTGGGCTATCTTTTAATCCAAAAATTAGAAAAATAATTTAAGAAAACAAAAT

Coding sequence (CDS)

ATGTCTCAGGTTGATAGCAGGAATTCATCTGCAGCCAAACGTGCTAGAACTGATGGTAGCCGAAGGGAAGACGACTGGACTTGTCCTAGCTGTGGAAACGTCAATTTTTCATTTAGAACAACTTGCAATATGCGCAACTGTACTCAGTCGCGTCCTGCTGATCATAATTTTAAATCTGCTGCCAAGCCTGTTCAAGCACCACAGGGTTACTCCTATTCTGCCCCTTACTTGGGTTCCGGTGCACCCTCTTCAATGTATCCTGGTGTACCACCCTATGGTTCATCCATACCTCCTTATGATGTGCCATTTTCTGGGGGATCAGCATATCATTACAACTACGGAAGCCGGTATTCGGCCGGAAGCCCCTACAGATCTTTGCACCTATCTGGGCATGCACCCTATTCTAGTGGATCTATGATGGGAAATAGTGCAGTGTATGGTATGCCACCAATTGTGGATCGTTATGGCAGGGCTTTGCCAATGGGCCCTGGCACCATGGGTCTACGGGCGGGCTTTTTTCAGGATGATATGTCTCAGAAGAAGGGTGCAGACACCACTCGTGACAATGATTGGCCGTGCCCGAAATGTGGAAACGTCAACTTCTCATTTAGAACAGTCTGTAACATGAGGAAATGCAATACACCAAAGCCTGGGTCACAGGGTCCGAGAAATGACAAAAGTTCTAAACAAAAGAATCCGGAGGGTAGCTGGAAGTGTGAGAAATGCAACAACATAAACTATCCATTCCGAACCAAATGCAATAGACAAAATTGTGGAGCCGACAAGCCAGCGGACTCTGAGAAATCCCCATCATCGGCACAGGAGGAAAGTGATCAGTAA

Protein sequence

MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQSRPADHNFKSAAKPVQAPQGYSYSAPYLGSGAPSSMYPGVPPYGSSIPPYDVPFSGGSAYHYNYGSRYSAGSPYRSLHLSGHAPYSSGSMMGNSAVYGMPPIVDRYGRALPMGPGTMGLRAGFFQDDMSQKKGADTTRDNDWPCPKCGNVNFSFRTVCNMRKCNTPKPGSQGPRNDKSSKQKNPEGSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSSAQEESDQ

Homology

[Close]

BLAST of Sed0002251 vs. NCBI nr
Match: XP_038893077.1 (ranBP2-type zinc finger protein At1g67325 [Benincasa hispida])

HSP 1 Score: 527.3 bits (1357), Expect = 7.9e-146
Identity = 257/285 (90.18%), Postives = 265/285 (92.98%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQSRPADHNFKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQ RPADHN KSA
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYLGSGAPSSMYPGVPPY------GSSIPPYDVPFSGGSAYHYNYG 120
           AKP+QAPQGYSYSAPY+GSGAPSSMYPGVPPY      GSSIPPYDVPFSGGSAYHYNY 
Sbjct: 61  AKPIQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYS 120

Query: 121 SRYSAGSPYRSLHLSGHAPYSSGSMMGNSAVYGMPPIVDRYGRALPMGPGTMGLRAGFFQ 180
           SR+SAGSPYR LHLSG APYSSGSMMGNSAVYGMPPI+DRYG ALPMGPG MG R GFF 
Sbjct: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGMPPIMDRYGMALPMGPGAMGPRPGFFP 180

Query: 181 DDMSQKKGADTTRDNDWPCPKCGNVNFSFRTVCNMRKCNTPKPGSQGPRNDKSSKQKNPE 240
           DD+SQKKGADTTRDNDW CPKCGN+NFSFRTVCNMRKCNTPKPGSQG +NDKSSKQK PE
Sbjct: 181 DDISQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQGIKNDKSSKQKTPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSSAQEESDQ 280
           GSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPS AQEE+DQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSPAQEENDQ 285

[Close]

BLAST of Sed0002251 vs. NCBI nr
Match: XP_023543009.1 (ranBP2-type zinc finger protein At1g67325-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 526.9 bits (1356), Expect = 1.0e-145
Identity = 255/285 (89.47%), Postives = 265/285 (92.98%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQSRPADHNFKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQ RPADHN KSA
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYLGSGAPSSMYPGVPPY------GSSIPPYDVPFSGGSAYHYNYG 120
           AKPV APQGYSYSAPY+GSGAPSSMYPGVPPY      GSSIPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRYSAGSPYRSLHLSGHAPYSSGSMMGNSAVYGMPPIVDRYGRALPMGPGTMGLRAGFFQ 180
           SR+SAGSPYR LHLSG APYSSGS+MGNSAVYGMPPI+DRYG ALPMGPGTMG R GFF 
Sbjct: 121 SRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGTMGPRPGFFP 180

Query: 181 DDMSQKKGADTTRDNDWPCPKCGNVNFSFRTVCNMRKCNTPKPGSQGPRNDKSSKQKNPE 240
           DDMSQKKGAD TRDNDWPCPKCGN+NFSFRTVCNMRKCNTPKPGSQGP+NDK SKQK PE
Sbjct: 181 DDMSQKKGADATRDNDWPCPKCGNINFSFRTVCNMRKCNTPKPGSQGPKNDKGSKQKTPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSSAQEESDQ 280
           GSWKCEKCNNINYPFRTKCNRQNCGADKPA+SEKSPS AQ+E ++
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQDEDNE 285

[Close]

BLAST of Sed0002251 vs. NCBI nr
Match: KAG6573592.1 (RanBP2-type zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 526.6 bits (1355), Expect = 1.3e-145
Identity = 254/285 (89.12%), Postives = 265/285 (92.98%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQSRPADHNFKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQ RPADHN KSA
Sbjct: 221 MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 280

Query: 61  AKPVQAPQGYSYSAPYLGSGAPSSMYPGVPPY------GSSIPPYDVPFSGGSAYHYNYG 120
           AKPV APQGYSYSAPY+GSGAPSSMYPG+PPY      GSSIPPYDVPFSGGSAYHYNYG
Sbjct: 281 AKPVHAPQGYSYSAPYMGSGAPSSMYPGIPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 340

Query: 121 SRYSAGSPYRSLHLSGHAPYSSGSMMGNSAVYGMPPIVDRYGRALPMGPGTMGLRAGFFQ 180
           SR+SAGSPYR LHLSG APYSSGS+MGNSAVYGMPPI+DRYG ALPMGPGTMG R GFF 
Sbjct: 341 SRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGTMGPRPGFFP 400

Query: 181 DDMSQKKGADTTRDNDWPCPKCGNVNFSFRTVCNMRKCNTPKPGSQGPRNDKSSKQKNPE 240
           DDMSQKKGAD TRDNDWPCPKCGN+NFSFRTVCNMRKCNTPKPGSQGP+NDK SKQK PE
Sbjct: 401 DDMSQKKGADATRDNDWPCPKCGNINFSFRTVCNMRKCNTPKPGSQGPKNDKGSKQKTPE 460

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSSAQEESDQ 280
           GSWKCEKCNNINYPFRTKCNRQNCGADKPA+SEKSPS AQ+E ++
Sbjct: 461 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQDEDNE 505

[Close]

BLAST of Sed0002251 vs. NCBI nr
Match: XP_022945886.1 (ranBP2-type zinc finger protein At1g67325-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 525.4 bits (1352), Expect = 3.0e-145
Identity = 254/285 (89.12%), Postives = 265/285 (92.98%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQSRPADHNFKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQ RPADHN KSA
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYLGSGAPSSMYPGVPPY------GSSIPPYDVPFSGGSAYHYNYG 120
           AKPV APQGYSYSAPY+GSGAPSSMYPGVPPY      GSSIPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRYSAGSPYRSLHLSGHAPYSSGSMMGNSAVYGMPPIVDRYGRALPMGPGTMGLRAGFFQ 180
           SR+SAGSPYR LHLSG APYSSGS+MGNSAVYGMPPI+DRYG ALPMGPGTMG R GFF 
Sbjct: 121 SRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGTMGPRPGFFP 180

Query: 181 DDMSQKKGADTTRDNDWPCPKCGNVNFSFRTVCNMRKCNTPKPGSQGPRNDKSSKQKNPE 240
           DD+SQKKGAD TRDNDWPCPKCGN+NFSFRTVCNMRKCNTPKPGSQGP+NDK SKQK PE
Sbjct: 181 DDISQKKGADATRDNDWPCPKCGNINFSFRTVCNMRKCNTPKPGSQGPKNDKGSKQKTPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSSAQEESDQ 280
           GSWKCEKCNNINYPFRTKCNRQNCGADKPA+SEKSPS AQ+E ++
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQDEDNE 285

[Close]

BLAST of Sed0002251 vs. NCBI nr
Match: XP_004135329.1 (ranBP2-type zinc finger protein At1g67325 [Cucumis sativus] >XP_008446027.1 PREDICTED: ranBP2-type zinc finger protein At1g67325 [Cucumis melo] >KGN51665.1 hypothetical protein Csa_008826 [Cucumis sativus])

HSP 1 Score: 525.4 bits (1352), Expect = 3.0e-145
Identity = 256/285 (89.82%), Postives = 265/285 (92.98%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQSRPADHNFKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQ RPADHN KSA
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYLGSGAPSSMYPGVPPY------GSSIPPYDVPFSGGSAYHYNYG 120
           AKPVQAPQGYSYSAPY+GSGAPSSMYPGVPPY      GSSIPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRYSAGSPYRSLHLSGHAPYSSGSMMGNSAVYGMPPIVDRYGRALPMGPGTMGLRAGFFQ 180
           SR+SAGSPYR LHLSG APYSSGSMMGNSAVYG+PPI+DRYG ALPMGPG MG R GFF 
Sbjct: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180

Query: 181 DDMSQKKGADTTRDNDWPCPKCGNVNFSFRTVCNMRKCNTPKPGSQGPRNDKSSKQKNPE 240
           D+MSQKKGADTTRDNDW CPKCGN+NFSFRTVCNMRKCNTPKPGSQ  +NDKSSKQK PE
Sbjct: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSSAQEESDQ 280
           GSWKCEKCNNINYPFRTKCNRQNCGADKPA+SEKSPS AQEE+DQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 285

[Close]

BLAST of Sed0002251 vs. ExPASy Swiss-Prot
Match: Q8GZ43 (RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis thaliana OX=3702 GN=At1g67325 PE=1 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 1.8e-108
Identity = 203/290 (70.00%), Postives = 224/290 (77.24%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQSRPADHNFKSA 60
           MSQVD+RNSSAAKRARTDG RREDDW CPSCGNVNFSFRTTCNMRNCTQ RPADHN KSA
Sbjct: 1   MSQVDNRNSSAAKRARTDGGRREDDWICPSCGNVNFSFRTTCNMRNCTQPRPADHNGKSA 60

Query: 61  AKPVQAPQGYSYSAPYLGSGAPSSMYPGVPPY------GSSIPPYDVPFSGGSAYHYNYG 120
            KP+Q  QG+S    YLGSG P  +Y G  PY      GSS+PPYDVPFSGGS YH+NY 
Sbjct: 61  PKPMQHQQGFSSPGAYLGSGGPPPVYMGGSPYGSPLFNGSSMPPYDVPFSGGSPYHFNYN 120

Query: 121 SRYSAGSPYRSLHLSGHAPYSSGSMMGNSAVYGMPPIVDRYGRALPMGPGT---MGLRAG 180
           SR  AG+ YR LH+SG  PY  GSMMG+  +YGMPP +DRYG  + MGPG+   M  R  
Sbjct: 121 SRMPAGAHYRPLHMSGPPPYHGGSMMGSGGMYGMPPPIDRYGLGMAMGPGSAAAMMPRPR 180

Query: 181 FFQDDMSQKKGADTTRDNDWPCPKCGNVNFSFRTVCNMRKCNTPKPGS-QGPRNDKSSKQ 240
           F+ D+ SQK+  D+TRDNDW CP CGNVNFSFRTVCNMRKCNTPKPGS QG  +DK SKQ
Sbjct: 181 FYPDEKSQKR--DSTRDNDWTCPNCGNVNFSFRTVCNMRKCNTPKPGSQQGGSSDKISKQ 240

Query: 241 KNPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAD-SEKSPSSAQEESDQ 280
             PEGSWKC+ C NINYPFR+KCNRQNCGADKP D S  SPS A EE+DQ
Sbjct: 241 NAPEGSWKCDNCGNINYPFRSKCNRQNCGADKPGDRSNGSPSRAPEENDQ 288

[Close]

BLAST of Sed0002251 vs. ExPASy Swiss-Prot
Match: Q9AST1 (Transcription initiation factor TFIID subunit 15 OS=Arabidopsis thaliana OX=3702 GN=TAF15 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.4e-04
Identity = 32/79 (40.51%), Postives = 40/79 (50.63%), Query Frame = 0


Query: 151 IVDRYGRALPMGP--GTMGLRAGFFQDDMS-------QKKGADT--TRDNDWPCPKCGNV 210
           + +R G A P G   G+MG   G  +   +       Q  GA T     NDW CP CGNV
Sbjct: 156 VCNRCGTARPAGASGGSMGAGRGRGRGGGADGGAPGKQPSGAPTGLFGPNDWACPMCGNV 215

Query: 211 NFSFRTVCNMRKCNTPKPG 219
           N++ R  CN+  CNT KPG
Sbjct: 216 NWAKRLKCNI--CNTNKPG 232

[Close]

BLAST of Sed0002251 vs. ExPASy TrEMBL
Match: A0A5D3CW31 (RanBP2-type zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002320 PE=4 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 1.5e-145
Identity = 256/285 (89.82%), Postives = 265/285 (92.98%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQSRPADHNFKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQ RPADHN KSA
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYLGSGAPSSMYPGVPPY------GSSIPPYDVPFSGGSAYHYNYG 120
           AKPVQAPQGYSYSAPY+GSGAPSSMYPGVPPY      GSSIPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRYSAGSPYRSLHLSGHAPYSSGSMMGNSAVYGMPPIVDRYGRALPMGPGTMGLRAGFFQ 180
           SR+SAGSPYR LHLSG APYSSGSMMGNSAVYG+PPI+DRYG ALPMGPG MG R GFF 
Sbjct: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180

Query: 181 DDMSQKKGADTTRDNDWPCPKCGNVNFSFRTVCNMRKCNTPKPGSQGPRNDKSSKQKNPE 240
           D+MSQKKGADTTRDNDW CPKCGN+NFSFRTVCNMRKCNTPKPGSQ  +NDKSSKQK PE
Sbjct: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSSAQEESDQ 280
           GSWKCEKCNNINYPFRTKCNRQNCGADKPA+SEKSPS AQEE+DQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 285

[Close]

BLAST of Sed0002251 vs. ExPASy TrEMBL
Match: A0A5A7SU69 (RanBP2-type zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G001830 PE=4 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 1.5e-145
Identity = 256/285 (89.82%), Postives = 265/285 (92.98%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQSRPADHNFKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQ RPADHN KSA
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYLGSGAPSSMYPGVPPY------GSSIPPYDVPFSGGSAYHYNYG 120
           AKPVQAPQGYSYSAPY+GSGAPSSMYPGVPPY      GSSIPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRYSAGSPYRSLHLSGHAPYSSGSMMGNSAVYGMPPIVDRYGRALPMGPGTMGLRAGFFQ 180
           SR+SAGSPYR LHLSG APYSSGSMMGNSAVYG+PPI+DRYG ALPMGPG MG R GFF 
Sbjct: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180

Query: 181 DDMSQKKGADTTRDNDWPCPKCGNVNFSFRTVCNMRKCNTPKPGSQGPRNDKSSKQKNPE 240
           D+MSQKKGADTTRDNDW CPKCGN+NFSFRTVCNMRKCNTPKPGSQ  +NDKSSKQK PE
Sbjct: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSSAQEESDQ 280
           GSWKCEKCNNINYPFRTKCNRQNCGADKPA+SEKSPS AQEE+DQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 285

[Close]

BLAST of Sed0002251 vs. ExPASy TrEMBL
Match: A0A0A0KPV4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589330 PE=4 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 1.5e-145
Identity = 256/285 (89.82%), Postives = 265/285 (92.98%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQSRPADHNFKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQ RPADHN KSA
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYLGSGAPSSMYPGVPPY------GSSIPPYDVPFSGGSAYHYNYG 120
           AKPVQAPQGYSYSAPY+GSGAPSSMYPGVPPY      GSSIPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRYSAGSPYRSLHLSGHAPYSSGSMMGNSAVYGMPPIVDRYGRALPMGPGTMGLRAGFFQ 180
           SR+SAGSPYR LHLSG APYSSGSMMGNSAVYG+PPI+DRYG ALPMGPG MG R GFF 
Sbjct: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180

Query: 181 DDMSQKKGADTTRDNDWPCPKCGNVNFSFRTVCNMRKCNTPKPGSQGPRNDKSSKQKNPE 240
           D+MSQKKGADTTRDNDW CPKCGN+NFSFRTVCNMRKCNTPKPGSQ  +NDKSSKQK PE
Sbjct: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSSAQEESDQ 280
           GSWKCEKCNNINYPFRTKCNRQNCGADKPA+SEKSPS AQEE+DQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 285

[Close]

BLAST of Sed0002251 vs. ExPASy TrEMBL
Match: A0A6J1G249 (ranBP2-type zinc finger protein At1g67325-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449994 PE=4 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 1.5e-145
Identity = 254/285 (89.12%), Postives = 265/285 (92.98%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQSRPADHNFKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQ RPADHN KSA
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYLGSGAPSSMYPGVPPY------GSSIPPYDVPFSGGSAYHYNYG 120
           AKPV APQGYSYSAPY+GSGAPSSMYPGVPPY      GSSIPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPVHAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRYSAGSPYRSLHLSGHAPYSSGSMMGNSAVYGMPPIVDRYGRALPMGPGTMGLRAGFFQ 180
           SR+SAGSPYR LHLSG APYSSGS+MGNSAVYGMPPI+DRYG ALPMGPGTMG R GFF 
Sbjct: 121 SRFSAGSPYRPLHLSGPAPYSSGSLMGNSAVYGMPPIMDRYGIALPMGPGTMGPRPGFFP 180

Query: 181 DDMSQKKGADTTRDNDWPCPKCGNVNFSFRTVCNMRKCNTPKPGSQGPRNDKSSKQKNPE 240
           DD+SQKKGAD TRDNDWPCPKCGN+NFSFRTVCNMRKCNTPKPGSQGP+NDK SKQK PE
Sbjct: 181 DDISQKKGADATRDNDWPCPKCGNINFSFRTVCNMRKCNTPKPGSQGPKNDKGSKQKTPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSSAQEESDQ 280
           GSWKCEKCNNINYPFRTKCNRQNCGADKPA+SEKSPS AQ+E ++
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQDEDNE 285

[Close]

BLAST of Sed0002251 vs. ExPASy TrEMBL
Match: A0A1S3BE27 (ranBP2-type zinc finger protein At1g67325 OS=Cucumis melo OX=3656 GN=LOC103488879 PE=4 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 1.5e-145
Identity = 256/285 (89.82%), Postives = 265/285 (92.98%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQSRPADHNFKSA 60
           MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQ RPADHN KSA
Sbjct: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSA 60

Query: 61  AKPVQAPQGYSYSAPYLGSGAPSSMYPGVPPY------GSSIPPYDVPFSGGSAYHYNYG 120
           AKPVQAPQGYSYSAPY+GSGAPSSMYPGVPPY      GSSIPPYDVPFSGGSAYHYNYG
Sbjct: 61  AKPVQAPQGYSYSAPYMGSGAPSSMYPGVPPYGSSIFNGSSIPPYDVPFSGGSAYHYNYG 120

Query: 121 SRYSAGSPYRSLHLSGHAPYSSGSMMGNSAVYGMPPIVDRYGRALPMGPGTMGLRAGFFQ 180
           SR+SAGSPYR LHLSG APYSSGSMMGNSAVYG+PPI+DRYG ALPMGPG MG R GFF 
Sbjct: 121 SRFSAGSPYRPLHLSGPAPYSSGSMMGNSAVYGIPPIMDRYGMALPMGPGAMGPRPGFFP 180

Query: 181 DDMSQKKGADTTRDNDWPCPKCGNVNFSFRTVCNMRKCNTPKPGSQGPRNDKSSKQKNPE 240
           D+MSQKKGADTTRDNDW CPKCGN+NFSFRTVCNMRKCNTPKPGSQ  +NDKSSKQK PE
Sbjct: 181 DEMSQKKGADTTRDNDWACPKCGNINFSFRTVCNMRKCNTPKPGSQASKNDKSSKQKTPE 240

Query: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPADSEKSPSSAQEESDQ 280
           GSWKCEKCNNINYPFRTKCNRQNCGADKPA+SEKSPS AQEE+DQ
Sbjct: 241 GSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAQEENDQ 285

[Close]

BLAST of Sed0002251 vs. TAIR 10
Match: AT1G67325.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 398.3 bits (1022), Expect = 5.1e-111
Identity = 203/289 (70.24%), Postives = 224/289 (77.51%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQSRPADHNFKSA 60
           MSQVD+RNSSAAKRARTDG RREDDW CPSCGNVNFSFRTTCNMRNCTQ RPADHN KSA
Sbjct: 1   MSQVDNRNSSAAKRARTDGGRREDDWICPSCGNVNFSFRTTCNMRNCTQPRPADHNGKSA 60

Query: 61  AKPVQAPQGYSYSAPYLGSGAPSSMYPGVPPY------GSSIPPYDVPFSGGSAYHYNYG 120
            KP+Q  QG+S    YLGSG P  +Y G  PY      GSS+PPYDVPFSGGS YH+NY 
Sbjct: 61  PKPMQHQQGFSSPGAYLGSGGPPPVYMGGSPYGSPLFNGSSMPPYDVPFSGGSPYHFNYN 120

Query: 121 SRYSAGSPYRSLHLSGHAPYSSGSMMGNSAVYGMPPIVDRYGRALPMGPGT---MGLRAG 180
           SR  AG+ YR LH+SG  PY  GSMMG+  +YGMPP +DRYG  + MGPG+   M  R  
Sbjct: 121 SRMPAGAHYRPLHMSGPPPYHGGSMMGSGGMYGMPPPIDRYGLGMAMGPGSAAAMMPRPR 180

Query: 181 FFQDDMSQKKGADTTRDNDWPCPKCGNVNFSFRTVCNMRKCNTPKPGSQGPRNDKSSKQK 240
           F+ D+ SQK+  D+TRDNDW CP CGNVNFSFRTVCNMRKCNTPKPGSQG  +DK SKQ 
Sbjct: 181 FYPDEKSQKR--DSTRDNDWTCPNCGNVNFSFRTVCNMRKCNTPKPGSQGGSSDKISKQN 240

Query: 241 NPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAD-SEKSPSSAQEESDQ 280
            PEGSWKC+ C NINYPFR+KCNRQNCGADKP D S  SPS A EE+DQ
Sbjct: 241 APEGSWKCDNCGNINYPFRSKCNRQNCGADKPGDRSNGSPSRAPEENDQ 287

[Close]

BLAST of Sed0002251 vs. TAIR 10
Match: AT1G67325.2 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 393.7 bits (1010), Expect = 1.3e-109
Identity = 203/290 (70.00%), Postives = 224/290 (77.24%), Query Frame = 0


Query: 1   MSQVDSRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQSRPADHNFKSA 60
           MSQVD+RNSSAAKRARTDG RREDDW CPSCGNVNFSFRTTCNMRNCTQ RPADHN KSA
Sbjct: 1   MSQVDNRNSSAAKRARTDGGRREDDWICPSCGNVNFSFRTTCNMRNCTQPRPADHNGKSA 60

Query: 61  AKPVQAPQGYSYSAPYLGSGAPSSMYPGVPPY------GSSIPPYDVPFSGGSAYHYNYG 120
            KP+Q  QG+S    YLGSG P  +Y G  PY      GSS+PPYDVPFSGGS YH+NY 
Sbjct: 61  PKPMQHQQGFSSPGAYLGSGGPPPVYMGGSPYGSPLFNGSSMPPYDVPFSGGSPYHFNYN 120

Query: 121 SRYSAGSPYRSLHLSGHAPYSSGSMMGNSAVYGMPPIVDRYGRALPMGPGT---MGLRAG 180
           SR  AG+ YR LH+SG  PY  GSMMG+  +YGMPP +DRYG  + MGPG+   M  R  
Sbjct: 121 SRMPAGAHYRPLHMSGPPPYHGGSMMGSGGMYGMPPPIDRYGLGMAMGPGSAAAMMPRPR 180

Query: 181 FFQDDMSQKKGADTTRDNDWPCPKCGNVNFSFRTVCNMRKCNTPKPGS-QGPRNDKSSKQ 240
           F+ D+ SQK+  D+TRDNDW CP CGNVNFSFRTVCNMRKCNTPKPGS QG  +DK SKQ
Sbjct: 181 FYPDEKSQKR--DSTRDNDWTCPNCGNVNFSFRTVCNMRKCNTPKPGSQQGGSSDKISKQ 240

Query: 241 KNPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAD-SEKSPSSAQEESDQ 280
             PEGSWKC+ C NINYPFR+KCNRQNCGADKP D S  SPS A EE+DQ
Sbjct: 241 NAPEGSWKCDNCGNINYPFRSKCNRQNCGADKPGDRSNGSPSRAPEENDQ 288

[Close]

BLAST of Sed0002251 vs. TAIR 10
Match: AT1G50300.1 (TBP-associated factor 15 )

HSP 1 Score: 47.8 bits (112), Expect = 1.7e-05
Identity = 32/79 (40.51%), Postives = 40/79 (50.63%), Query Frame = 0


Query: 151 IVDRYGRALPMGP--GTMGLRAGFFQDDMS-------QKKGADT--TRDNDWPCPKCGNV 210
           + +R G A P G   G+MG   G  +   +       Q  GA T     NDW CP CGNV
Sbjct: 156 VCNRCGTARPAGASGGSMGAGRGRGRGGGADGGAPGKQPSGAPTGLFGPNDWACPMCGNV 215

Query: 211 NFSFRTVCNMRKCNTPKPG 219
           N++ R  CN+  CNT KPG
Sbjct: 216 NWAKRLKCNI--CNTNKPG 232

The following BLAST results are available for this feature:

BLAST of Sed0002251 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893077.1	7.9e-146	90.18	ranBP2-type zinc finger protein At1g67325 [Benincasa hispida]	[more]
XP_023543009.1	1.0e-145	89.47	ranBP2-type zinc finger protein At1g67325-like isoform X1 [Cucurbita pepo subsp....	[more]
KAG6573592.1	1.3e-145	89.12	RanBP2-type zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022945886.1	3.0e-145	89.12	ranBP2-type zinc finger protein At1g67325-like isoform X1 [Cucurbita moschata]	[more]
XP_004135329.1	3.0e-145	89.82	ranBP2-type zinc finger protein At1g67325 [Cucumis sativus] >XP_008446027.1 PRED...	[more]

BLAST of Sed0002251 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GZ43	1.8e-108	70.00	RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]
Q9AST1	2.4e-04	40.51	Transcription initiation factor TFIID subunit 15 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of Sed0002251 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CW31	1.5e-145	89.82	RanBP2-type zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7SU69	1.5e-145	89.82	RanBP2-type zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A0A0KPV4	1.5e-145	89.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589330 PE=4 SV=1	[more]
A0A6J1G249	1.5e-145	89.12	ranBP2-type zinc finger protein At1g67325-like isoform X1 OS=Cucurbita moschata ...	[more]
A0A1S3BE27	1.5e-145	89.82	ranBP2-type zinc finger protein At1g67325 OS=Cucumis melo OX=3656 GN=LOC10348887...	[more]

BLAST of Sed0002251 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67325.1	5.1e-111	70.24	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT1G67325.2	1.3e-109	70.00	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT1G50300.1	1.7e-05	40.51	TBP-associated factor 15	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 24..50 e-value: 0.045 score: 22.5 coord: 189..215 e-value: 3.4E-4 score: 30.0 coord: 235..261 e-value: 1.1E-4 score: 31.6
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 188..217 e-value: 3.1E-5 score: 23.2 coord: 233..263 e-value: 1.5E-6 score: 27.4 coord: 22..44 e-value: 4.9E-7 score: 29.0
None	No IPR available	GENE3D	4.10.1060.10		coord: 226..265 e-value: 3.1E-8 score: 34.7 coord: 14..54 e-value: 1.8E-10 score: 41.9 coord: 178..219 e-value: 2.7E-11 score: 44.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 258..279
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 214..241
None	No IPR available	PANTHER	PTHR23111:SF35	OS08G0521400 PROTEIN	coord: 5..270
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 5..270
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 182..219
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 17..53
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 228..265

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002251.1	Sed0002251.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding