Sed0002245 (gene) Chayote v1

Overview


Name	Sed0002245
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Nuclear transport factor 2 (NTF2) family protein
Location	LG07: 37266122 .. 37269387 (+)
RNA-Seq Expression	Sed0002245
Synteny	Sed0002245

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAGTGTATTAGCCAAAAGAGAGGGCACGTTGCGCGCCATTGAAATCGAGCTCGATGAAATTGTGGAGGTTCAGGCATCTGGTTCTGCTTGGTTCGCCGAGAAATTTGGAACAATCTCAAACCACACTCGCTCCGGTAATCATCAACTTCTCTTCCACATCTTCTCAATTCCATAATCAATTTTAAAAACCTAGAAATTCTTCTGCAACTAGGCTTCATTGCTGTTCTTGAAAATGCTAGGCGATGGCGAGATCATGGAGGATCGAGCGATGGAGGCGTACGGCAAGGGAGCCAACGATTTCAAATCCACCAAGCGTTTTGCCGATGATTTCATGCCTCACATCCTTAATCTGTGAGTTTCTTTGTCTTTCAAATTGTTGTGAGAGATTCTTCTTTGAGCCATGAGATTGTTCGTTTTGTTTAGGTATGGATCTTCTGCAACGCCTCGGGATTTCGAGATCTACGCTGCTGATGCTTCGTTCGAGGATCCGCTCACGCGTGCTCACGGGTATGTACTCTTCGATTCGATTCTTAGAACATGAACTTGCTTTCATTTATGATTTGTTTCTTCGAAAACAAGGAATTAAAGAATTATCACAGAAGATGTTTGAGATATGACTTGAATGCACCAATGCCCTGCGATTAGTAGTCGTGGTTCACTAATACCGCATTCTGTAATAGGGTTTAATGAAAATGTATATATAAACTCGAATTAAACCCTAGCCGTATTATGACGTTCATTCTATCGGTAATTTGCCTCTCCTTAATAAAAATTGTTCTCCCTCTATGCCTGTGGACTAGCTAACACAACGTTAGTGAACTACATAAATCCGTGTGTATTCTTATTTTCTTCTTCTTTTGCATTTATCATTCTCTGTTTTCTCACTTTTGTATCGATCGTCGATTGCCGTTTTCATAACAAACGATGAACTTGAGTTTAGTCTGTTTTCTGATTGTGCAGAGTGAAGGAAATCAAATCGGCATTTTACTCTCTGTCTAAGGTTCTATCACTTTCCACTTTTCTCAATTGGTTTCTTTGATTTAACACGTAACATAGTTCAGATGAAAATGTTCACTCTAATTTGTTTGAAAGGAGGAGAGAGCTCAAATTTGTCTCAAAATATTGTGATTGAATTGAATTAGATCAAATAAACCTTTCATCCAAATGATAACATATTTCTGTAGTTCTTTTCTTTATACAAAGCTGAAAAGTAATATATTAGACACTACTGTCTGAATGGTAAATAAGTACAGGCACATATATAACATGTTGATCAGATTCAAATTCTTTTTTAATAATTGGAAATCAGAGTTGGTCCCAAGGCCCATACTGATCGATCAGATTAAAATTATAAGCAAAGCCTTAAATTTTGCCTTTTATTATAAAAAATAGTTCACAAGCCCACCATCAAGCTCTGGAAATTATGAGATGATTCCTGCCATGTTAATTCCTGGTTCTCATTATGTCCAATTATTTTTTCAAGGGTAATAGTAGTTTAGATTCTTATTTGGATGTGTCCTCTGTCCAACATAAACATATTAATTTCAAGAACTTCTATTGGTATTTCCTAGTATGAACCTTTGATTAACCACCCAAAATGAACATATCAGAGGATCTTAACAAAAACATGAATGTCTTGGGCTTTTTGGGGTTGGCAAGGAGAGAAATGAAAAGTGTATATAGCTATTTGCTTTTCTGGTTACTAGTACCATATTACTTGCTGCATGTCACTATAATCCATCAAACAACCTTCCACTATTTCTTGCATTCTTTATGAATTTTGTTATACTCTTCAGGTCTTTAGTGAATCAAGAATTGTGGAATACACTGTCAAAGAGGAACGTATTTCACCTCGAAAACGCGAGGTGCACGACCTAGCACAATCGCTTTTGTTTTCTACCTATATCAATTCATTTACATCTGGTTGACAAGCGTTAAATTTGAACACAGATTATTGTCGATTGTAAGCAATACTATAAGTTCTTGGGGAGGGATATAGATCTGGAATCACTCATCAAGTTGTATGTCGTGGAAGGAAAAATTGTTCGTCACGAGGACTGGTACGTTATCCAACATTTCTCAGCTTTACTTTTCTTTGAATAAACTTCTTGTTACCTCCATATAGCAACAGGGCACCTGCCTTCCCGTCTCTTGCTTTCATGTTTTCCTAATTGCTCCAATATTGATTTTTATTGTGTTATCCGTGAATATCTGGGCTAGTTTTTGTGTACCTTAATTATTTTCAAAGAACAAACCTCTCGATCCTACAACATTTGGTTGTCAAGGAAATCAGATTGTTTTTTGATATTTTTTTGAAACAAGGGTAACCACGCCCATCCTTAGGCCAGACACCGAGAGACATCGAAGAAATGGAGATAGGGAGGTGTTTACAAAGTAATGTTACAGATGAGTCTTGAACTTGAGACCTTGAGGGGAGCACACCTTCAAATTCCAAACTTCAACCAACTATGCCACCCCTTGGGGAATCCTCTAGGAAATTATCTTTTAAGTTATAGGTGGCCACCATGGATTGAATTTATAACCTCTTTAATCCTTCTAGCCCTCTTTGACCTCTAAGCCAACTAGAAATTAATTTCTAAATAAGTGGTTACCAAGACCATTATGCGGATGTTTAAAATTGAAAATTGAACAACTCATACTATGCATAACCATCTGCTGTTGATATCATCTGATGATTGAATATGGGGCTGTATAGGTGGAACAAGAAGCCACTTTTGAATAGAGAAACAATCACATTACCGATGGTCGGTCGAGTTTTGGAAATGAGTCGAAGATGTACAATGTTAGCTACTCATGCAATGATGGGATTTGGTAAAGATTAAACTATAGTCTAATTGGAATGAGGGCGTTAGGTAGAACATTATAATAGTTTCTCAATTTGGTTGTGTTGTTAATGTATCACAGTTGATGATTGACCTAATTATCTGGTTTTTGTAATTCGTCTGGTTCTTCCTTGCCGTCATTGAGATGCTTGACGGGTGGTTTAGTTGGATCACTACAATAATTTTGTTCGGCTGTACGAGAAAAGGAGAATCACCAACGATCGATTCAAGTTGATATTGACATGGTGTGCCTTATTGAAACTATTCTAATAGTCGATGTTATAAGGTGAATTAGGAAGAGAGGAAGGGAGTTGGAGGGTTTTTTTTTGTATTCTCTAGTTTGCGCAAATCTCCACTATTTTTATGAGACATATTGCTTGATATTATAGCATTTGGATTCTTAAAAATCCATAAAAAGTTAA

mRNA sequence

GTAGTGTATTAGCCAAAAGAGAGGGCACGTTGCGCGCCATTGAAATCGAGCTCGATGAAATTGTGGAGGTTCAGGCATCTGGTTCTGCTTGGTTCGCCGAGAAATTTGGAACAATCTCAAACCACACTCGCTCCGGCTTCATTGCTGTTCTTGAAAATGCTAGGCGATGGCGAGATCATGGAGGATCGAGCGATGGAGGCGTACGGCAAGGGAGCCAACGATTTCAAATCCACCAAGCGTTTTGCCGATGATTTCATGCCTCACATCCTTAATCTGTATGGATCTTCTGCAACGCCTCGGGATTTCGAGATCTACGCTGCTGATGCTTCGTTCGAGGATCCGCTCACGCGTGCTCACGGAGTGAAGGAAATCAAATCGGCATTTTACTCTCTGTCTAAGGTCTTTAGTGAATCAAGAATTGTGGAATACACTGTCAAAGAGGAACGTATTTCACCTCGAAAACGCGAGATTATTGTCGATTGTAAGCAATACTATAAGTTCTTGGGGAGGGATATAGATCTGGAATCACTCATCAAGTTGTATGTCGTGGAAGGAAAAATTGTTCGTCACGAGGACTGGTGGAACAAGAAGCCACTTTTGAATAGAGAAACAATCACATTACCGATGGTCGGTCGAGTTTTGGAAATGAGTCGAAGATGTACAATGTTAGCTACTCATGCAATGATGGGATTTGGTAAAGATTAAACTATAGTCTAATTGGAATGAGGGCGTTAGGTAGAACATTATAATAGTTTCTCAATTTGGTTGTGTTGTTAATGTATCACAGTTGATGATTGACCTAATTATCTGGTTTTTGTAATTCGTCTGGTTCTTCCTTGCCGTCATTGAGATGCTTGACGGGTGGTTTAGTTGGATCACTACAATAATTTTGTTCGGCTGTACGAGAAAAGGAGAATCACCAACGATCGATTCAAGTTGATATTGACATGGTGTGCCTTATTGAAACTATTCTAATAGTCGATGTTATAAGGTGAATTAGGAAGAGAGGAAGGGAGTTGGAGGGTTTTTTTTTGTATTCTCTAGTTTGCGCAAATCTCCACTATTTTTATGAGACATATTGCTTGATATTATAGCATTTGGATTCTTAAAAATCCATAAAAAGTTAA

Coding sequence (CDS)

ATGAAATTGTGGAGGTTCAGGCATCTGGTTCTGCTTGGTTCGCCGAGAAATTTGGAACAATCTCAAACCACACTCGCTCCGGCTTCATTGCTGTTCTTGAAAATGCTAGGCGATGGCGAGATCATGGAGGATCGAGCGATGGAGGCGTACGGCAAGGGAGCCAACGATTTCAAATCCACCAAGCGTTTTGCCGATGATTTCATGCCTCACATCCTTAATCTGTATGGATCTTCTGCAACGCCTCGGGATTTCGAGATCTACGCTGCTGATGCTTCGTTCGAGGATCCGCTCACGCGTGCTCACGGAGTGAAGGAAATCAAATCGGCATTTTACTCTCTGTCTAAGGTCTTTAGTGAATCAAGAATTGTGGAATACACTGTCAAAGAGGAACGTATTTCACCTCGAAAACGCGAGATTATTGTCGATTGTAAGCAATACTATAAGTTCTTGGGGAGGGATATAGATCTGGAATCACTCATCAAGTTGTATGTCGTGGAAGGAAAAATTGTTCGTCACGAGGACTGGTGGAACAAGAAGCCACTTTTGAATAGAGAAACAATCACATTACCGATGGTCGGTCGAGTTTTGGAAATGAGTCGAAGATGTACAATGTTAGCTACTCATGCAATGATGGGATTTGGTAAAGATTAA

Protein sequence

MKLWRFRHLVLLGSPRNLEQSQTTLAPASLLFLKMLGDGEIMEDRAMEAYGKGANDFKSTKRFADDFMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYTVKEERISPRKREIIVDCKQYYKFLGRDIDLESLIKLYVVEGKIVRHEDWWNKKPLLNRETITLPMVGRVLEMSRRCTMLATHAMMGFGKD

Homology

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BLAST of Sed0002245 vs. NCBI nr
Match: KAG6601231.1 (Exocyst complex component EXO70A1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 335.5 bits (859), Expect = 3.4e-88
Identity = 171/202 (84.65%), Postives = 181/202 (89.60%), Query Frame = 0


Query: 16  RNLEQS-QTTLAPASLLFLKMLGDGEIMEDRAMEAYGKGANDFKSTKRFADDFMPHILNL 75
           R LE S +TTLAP SLLFLKMLGDGEI ED  +EA  K A D K+TKRFADD MPHILNL
Sbjct: 671 RKLEHSRRTTLAPDSLLFLKMLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNL 730

Query: 76  YGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYTVKEERISP 135
           YGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEY+VKE+ ISP
Sbjct: 731 YGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP 790

Query: 136 RKREIIVDCKQYYKFLGRDIDLESLIKLYVVEGKIVRHEDWWNKKPLLNRETITLPMVGR 195
            K EI VD KQ+YKFLGR+IDLESLIKLYV+EGKIVRHEDWWNKKPLLNRET+ LPMVGR
Sbjct: 791 GKHEITVDNKQHYKFLGRNIDLESLIKLYVLEGKIVRHEDWWNKKPLLNRETVKLPMVGR 850

Query: 196 VLEMSRRCTMLATHAMMGFGKD 217
           VLEM+RRC MLATHAMM FGKD
Sbjct: 851 VLEMTRRCAMLATHAMMRFGKD 872

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BLAST of Sed0002245 vs. NCBI nr
Match: XP_008446746.1 (PREDICTED: uncharacterized protein LOC103489375 isoform X2 [Cucumis melo])

HSP 1 Score: 317.8 bits (813), Expect = 7.3e-83
Identity = 167/218 (76.61%), Postives = 179/218 (82.11%), Query Frame = 0


Query: 1   MKLWRFRHLVLLGSPRN--LEQSQTTLAPASLLFLKMLGDGEIMEDRAMEAYGKGANDFK 60
           M +WR R  VLL    N  + + Q +L   SLLFLKM GDGEI  D  +EA  K A D K
Sbjct: 15  MGIWRMRPQVLLRRRENWTILEGQHSLRLRSLLFLKMPGDGEITADPTIEACTKEACDSK 74

Query: 61  STKRFADDFMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFS 120
           +TKR ADD MPHILNLYGSSATPRDFEIYA DASF+DPLTRA+GVKEIKSAFYSLSKVFS
Sbjct: 75  TTKRLADDIMPHILNLYGSSATPRDFEIYAPDASFKDPLTRAYGVKEIKSAFYSLSKVFS 134

Query: 121 ESRIVEYTVKEERISPRKREIIVDCKQYYKFLGRDIDLESLIKLYVVEGKIVRHEDWWNK 180
           ESRIVEY  KE  ISP K EIIVD KQ+YKFLGR+IDLESLIKLYVVEGKIVRHEDWWNK
Sbjct: 135 ESRIVEYDFKERLISPGKHEIIVDNKQHYKFLGRNIDLESLIKLYVVEGKIVRHEDWWNK 194

Query: 181 KPLLNRETITLPMVGRVLEMSRRCTMLATHAMMGFGKD 217
           KPLLNRET+ LPMVGR LEM+RR TMLATHAMMGFGKD
Sbjct: 195 KPLLNRETVQLPMVGRFLEMTRRGTMLATHAMMGFGKD 232

[Close]

BLAST of Sed0002245 vs. NCBI nr
Match: XP_004135041.1 (uncharacterized protein LOC101206496 isoform X2 [Cucumis sativus] >KGN52177.1 hypothetical protein Csa_008580 [Cucumis sativus])

HSP 1 Score: 317.0 bits (811), Expect = 1.3e-82
Identity = 166/218 (76.15%), Postives = 176/218 (80.73%), Query Frame = 0


Query: 1   MKLWRFRHLVLLGSPRN--LEQSQTTLAPASLLFLKMLGDGEIMEDRAMEAYGKGANDFK 60
           M +WR R  VLL    N  + + Q +L   SLLFLKM G GEI  D  +EA  K A D K
Sbjct: 15  MGIWRPRLQVLLRGKENWRILEEQYSLRLRSLLFLKMPGGGEITADPTIEACTKEACDSK 74

Query: 61  STKRFADDFMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFS 120
           +TKR ADD MPHILNLYGSSATPRDFEIYA DASFEDPLTRAHGVKEIKSAFYSLSKVFS
Sbjct: 75  TTKRLADDIMPHILNLYGSSATPRDFEIYAPDASFEDPLTRAHGVKEIKSAFYSLSKVFS 134

Query: 121 ESRIVEYTVKEERISPRKREIIVDCKQYYKFLGRDIDLESLIKLYVVEGKIVRHEDWWNK 180
           ESRIVEY   E  ISP K EI VD KQ+YKFLGR+IDLESLIKLYVVEGKIVRHEDWWNK
Sbjct: 135 ESRIVEYNFNERLISPGKHEITVDNKQHYKFLGRNIDLESLIKLYVVEGKIVRHEDWWNK 194

Query: 181 KPLLNRETITLPMVGRVLEMSRRCTMLATHAMMGFGKD 217
           KPLLNRET+ LPMVGR LEM+RRC MLATHAMMGFGKD
Sbjct: 195 KPLLNRETVQLPMVGRFLEMTRRCAMLATHAMMGFGKD 232

[Close]

BLAST of Sed0002245 vs. NCBI nr
Match: XP_022957109.1 (uncharacterized protein LOC111458589 [Cucurbita moschata] >KAG7032022.1 hypothetical protein SDJN02_06064 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 313.2 bits (801), Expect = 1.8e-81
Identity = 156/182 (85.71%), Postives = 165/182 (90.66%), Query Frame = 0


Query: 35  MLGDGEIMEDRAMEAYGKGANDFKSTKRFADDFMPHILNLYGSSATPRDFEIYAADASFE 94
           MLGDGEI ED  +EA  K A D K+TKRFADD MPHILNLYGSSATPRDFEIYAADASFE
Sbjct: 1   MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFE 60

Query: 95  DPLTRAHGVKEIKSAFYSLSKVFSESRIVEYTVKEERISPRKREIIVDCKQYYKFLGRDI 154
           DPLTRAHGVKEIKSAFYSLSKVFSESRIVEY+VKE+ ISP K EI VD KQ+YKFLGR+I
Sbjct: 61  DPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISPGKHEITVDNKQHYKFLGRNI 120

Query: 155 DLESLIKLYVVEGKIVRHEDWWNKKPLLNRETITLPMVGRVLEMSRRCTMLATHAMMGFG 214
           DLESLIKLYV+EGKIVRHEDWWNKKPLLNRET+ LPMVGRVLEM+RRC MLATHAMM FG
Sbjct: 121 DLESLIKLYVLEGKIVRHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFG 180

Query: 215 KD 217
           KD
Sbjct: 181 KD 182

[Close]

BLAST of Sed0002245 vs. NCBI nr
Match: XP_016900182.1 (PREDICTED: uncharacterized protein LOC103489375 isoform X1 [Cucumis melo])

HSP 1 Score: 310.5 bits (794), Expect = 1.2e-80
Identity = 167/226 (73.89%), Postives = 179/226 (79.20%), Query Frame = 0


Query: 1   MKLWRFRHLVLLGSPRN--LEQSQTTLAPASLLFLKMLGDGEIMEDRAMEAYGKGANDFK 60
           M +WR R  VLL    N  + + Q +L   SLLFLKM GDGEI  D  +EA  K A D K
Sbjct: 15  MGIWRMRPQVLLRRRENWTILEGQHSLRLRSLLFLKMPGDGEITADPTIEACTKEACDSK 74

Query: 61  STKRFADDFMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHG--------VKEIKSAF 120
           +TKR ADD MPHILNLYGSSATPRDFEIYA DASF+DPLTRA+G        VKEIKSAF
Sbjct: 75  TTKRLADDIMPHILNLYGSSATPRDFEIYAPDASFKDPLTRAYGCSVFRFCSVKEIKSAF 134

Query: 121 YSLSKVFSESRIVEYTVKEERISPRKREIIVDCKQYYKFLGRDIDLESLIKLYVVEGKIV 180
           YSLSKVFSESRIVEY  KE  ISP K EIIVD KQ+YKFLGR+IDLESLIKLYVVEGKIV
Sbjct: 135 YSLSKVFSESRIVEYDFKERLISPGKHEIIVDNKQHYKFLGRNIDLESLIKLYVVEGKIV 194

Query: 181 RHEDWWNKKPLLNRETITLPMVGRVLEMSRRCTMLATHAMMGFGKD 217
           RHEDWWNKKPLLNRET+ LPMVGR LEM+RR TMLATHAMMGFGKD
Sbjct: 195 RHEDWWNKKPLLNRETVQLPMVGRFLEMTRRGTMLATHAMMGFGKD 240

[Close]

BLAST of Sed0002245 vs. ExPASy TrEMBL
Match: A0A1S3BFU1 (uncharacterized protein LOC103489375 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489375 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 3.6e-83
Identity = 167/218 (76.61%), Postives = 179/218 (82.11%), Query Frame = 0


Query: 1   MKLWRFRHLVLLGSPRN--LEQSQTTLAPASLLFLKMLGDGEIMEDRAMEAYGKGANDFK 60
           M +WR R  VLL    N  + + Q +L   SLLFLKM GDGEI  D  +EA  K A D K
Sbjct: 15  MGIWRMRPQVLLRRRENWTILEGQHSLRLRSLLFLKMPGDGEITADPTIEACTKEACDSK 74

Query: 61  STKRFADDFMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFS 120
           +TKR ADD MPHILNLYGSSATPRDFEIYA DASF+DPLTRA+GVKEIKSAFYSLSKVFS
Sbjct: 75  TTKRLADDIMPHILNLYGSSATPRDFEIYAPDASFKDPLTRAYGVKEIKSAFYSLSKVFS 134

Query: 121 ESRIVEYTVKEERISPRKREIIVDCKQYYKFLGRDIDLESLIKLYVVEGKIVRHEDWWNK 180
           ESRIVEY  KE  ISP K EIIVD KQ+YKFLGR+IDLESLIKLYVVEGKIVRHEDWWNK
Sbjct: 135 ESRIVEYDFKERLISPGKHEIIVDNKQHYKFLGRNIDLESLIKLYVVEGKIVRHEDWWNK 194

Query: 181 KPLLNRETITLPMVGRVLEMSRRCTMLATHAMMGFGKD 217
           KPLLNRET+ LPMVGR LEM+RR TMLATHAMMGFGKD
Sbjct: 195 KPLLNRETVQLPMVGRFLEMTRRGTMLATHAMMGFGKD 232

[Close]

BLAST of Sed0002245 vs. ExPASy TrEMBL
Match: A0A0A0KUR1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G613550 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 6.1e-83
Identity = 166/218 (76.15%), Postives = 176/218 (80.73%), Query Frame = 0


Query: 1   MKLWRFRHLVLLGSPRN--LEQSQTTLAPASLLFLKMLGDGEIMEDRAMEAYGKGANDFK 60
           M +WR R  VLL    N  + + Q +L   SLLFLKM G GEI  D  +EA  K A D K
Sbjct: 15  MGIWRPRLQVLLRGKENWRILEEQYSLRLRSLLFLKMPGGGEITADPTIEACTKEACDSK 74

Query: 61  STKRFADDFMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFS 120
           +TKR ADD MPHILNLYGSSATPRDFEIYA DASFEDPLTRAHGVKEIKSAFYSLSKVFS
Sbjct: 75  TTKRLADDIMPHILNLYGSSATPRDFEIYAPDASFEDPLTRAHGVKEIKSAFYSLSKVFS 134

Query: 121 ESRIVEYTVKEERISPRKREIIVDCKQYYKFLGRDIDLESLIKLYVVEGKIVRHEDWWNK 180
           ESRIVEY   E  ISP K EI VD KQ+YKFLGR+IDLESLIKLYVVEGKIVRHEDWWNK
Sbjct: 135 ESRIVEYNFNERLISPGKHEITVDNKQHYKFLGRNIDLESLIKLYVVEGKIVRHEDWWNK 194

Query: 181 KPLLNRETITLPMVGRVLEMSRRCTMLATHAMMGFGKD 217
           KPLLNRET+ LPMVGR LEM+RRC MLATHAMMGFGKD
Sbjct: 195 KPLLNRETVQLPMVGRFLEMTRRCAMLATHAMMGFGKD 232

[Close]

BLAST of Sed0002245 vs. ExPASy TrEMBL
Match: A0A6J1H109 (uncharacterized protein LOC111458589 OS=Cucurbita moschata OX=3662 GN=LOC111458589 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 8.8e-82
Identity = 156/182 (85.71%), Postives = 165/182 (90.66%), Query Frame = 0


Query: 35  MLGDGEIMEDRAMEAYGKGANDFKSTKRFADDFMPHILNLYGSSATPRDFEIYAADASFE 94
           MLGDGEI ED  +EA  K A D K+TKRFADD MPHILNLYGSSATPRDFEIYAADASFE
Sbjct: 1   MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFE 60

Query: 95  DPLTRAHGVKEIKSAFYSLSKVFSESRIVEYTVKEERISPRKREIIVDCKQYYKFLGRDI 154
           DPLTRAHGVKEIKSAFYSLSKVFSESRIVEY+VKE+ ISP K EI VD KQ+YKFLGR+I
Sbjct: 61  DPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISPGKHEITVDNKQHYKFLGRNI 120

Query: 155 DLESLIKLYVVEGKIVRHEDWWNKKPLLNRETITLPMVGRVLEMSRRCTMLATHAMMGFG 214
           DLESLIKLYV+EGKIVRHEDWWNKKPLLNRET+ LPMVGRVLEM+RRC MLATHAMM FG
Sbjct: 121 DLESLIKLYVLEGKIVRHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFG 180

Query: 215 KD 217
           KD
Sbjct: 181 KD 182

[Close]

BLAST of Sed0002245 vs. ExPASy TrEMBL
Match: A0A1S4DW20 (uncharacterized protein LOC103489375 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489375 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 5.7e-81
Identity = 167/226 (73.89%), Postives = 179/226 (79.20%), Query Frame = 0


Query: 1   MKLWRFRHLVLLGSPRN--LEQSQTTLAPASLLFLKMLGDGEIMEDRAMEAYGKGANDFK 60
           M +WR R  VLL    N  + + Q +L   SLLFLKM GDGEI  D  +EA  K A D K
Sbjct: 15  MGIWRMRPQVLLRRRENWTILEGQHSLRLRSLLFLKMPGDGEITADPTIEACTKEACDSK 74

Query: 61  STKRFADDFMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHG--------VKEIKSAF 120
           +TKR ADD MPHILNLYGSSATPRDFEIYA DASF+DPLTRA+G        VKEIKSAF
Sbjct: 75  TTKRLADDIMPHILNLYGSSATPRDFEIYAPDASFKDPLTRAYGCSVFRFCSVKEIKSAF 134

Query: 121 YSLSKVFSESRIVEYTVKEERISPRKREIIVDCKQYYKFLGRDIDLESLIKLYVVEGKIV 180
           YSLSKVFSESRIVEY  KE  ISP K EIIVD KQ+YKFLGR+IDLESLIKLYVVEGKIV
Sbjct: 135 YSLSKVFSESRIVEYDFKERLISPGKHEIIVDNKQHYKFLGRNIDLESLIKLYVVEGKIV 194

Query: 181 RHEDWWNKKPLLNRETITLPMVGRVLEMSRRCTMLATHAMMGFGKD 217
           RHEDWWNKKPLLNRET+ LPMVGR LEM+RR TMLATHAMMGFGKD
Sbjct: 195 RHEDWWNKKPLLNRETVQLPMVGRFLEMTRRGTMLATHAMMGFGKD 240

[Close]

BLAST of Sed0002245 vs. ExPASy TrEMBL
Match: A0A6J1JHF8 (uncharacterized protein LOC111484382 OS=Cucurbita maxima OX=3661 GN=LOC111484382 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 2.2e-80
Identity = 153/182 (84.07%), Postives = 164/182 (90.11%), Query Frame = 0


Query: 35  MLGDGEIMEDRAMEAYGKGANDFKSTKRFADDFMPHILNLYGSSATPRDFEIYAADASFE 94
           M GDGEI ED  +EA  K A D K+TKRFADD MPHILNLYGSSATPRDFEIYAADASFE
Sbjct: 1   MPGDGEITEDPIIEASSKEACDSKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFE 60

Query: 95  DPLTRAHGVKEIKSAFYSLSKVFSESRIVEYTVKEERISPRKREIIVDCKQYYKFLGRDI 154
           DPLTRAHGVKEIKSAFYSLSKVFSESRIVEY+VKE+ ISP K EI VD KQ+YKFLGR+I
Sbjct: 61  DPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISPGKHEITVDNKQHYKFLGRNI 120

Query: 155 DLESLIKLYVVEGKIVRHEDWWNKKPLLNRETITLPMVGRVLEMSRRCTMLATHAMMGFG 214
           DLESLIKLYV+EGK++RHEDWWNKKPLLNRET+ LPMVGRVLEM+RRC MLATHAMM FG
Sbjct: 121 DLESLIKLYVLEGKVIRHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFG 180

Query: 215 KD 217
           KD
Sbjct: 181 KD 182

[Close]

BLAST of Sed0002245 vs. TAIR 10
Match: AT5G04830.1 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 249.6 bits (636), Expect = 2.3e-66
Identity = 119/173 (68.79%), Postives = 142/173 (82.08%), Query Frame = 0


Query: 44  DRAMEAYGKGANDFKSTKRFADDFMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGV 103
           D A E  GKGA + KS KRFAD  MPH+LNLYGSSA   DF++YA +ASFEDPLT A GV
Sbjct: 2   DPARECEGKGACELKSNKRFADKIMPHLLNLYGSSAKANDFDMYAPNASFEDPLTHAQGV 61

Query: 104 KEIKSAFYSLSKVFSESRIVEYTVKEERISPRKREIIVDCKQYYKFLGRDIDLESLIKLY 163
           K+IKSAFYSL KVF ES+IVEY ++E   SP K+EI++D KQ+YK +GR+ID+ SLIKLY
Sbjct: 62  KQIKSAFYSLPKVFGESKIVEYHIQESETSPGKKEILIDNKQHYKIMGRNIDMISLIKLY 121

Query: 164 VVEGKIVRHEDWWNKKPLLNRETITLPMVGRVLEMSRRCTMLATHAMMGFGKD 217
           V +GKIVRHEDWW+KKPL NR+T++ P+VGRV+EM RR  MLATHAMMGFGKD
Sbjct: 122 VEDGKIVRHEDWWDKKPLRNRDTVSFPLVGRVMEMGRRGLMLATHAMMGFGKD 174

[Close]

BLAST of Sed0002245 vs. TAIR 10
Match: AT5G04830.2 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 249.6 bits (636), Expect = 2.3e-66
Identity = 119/173 (68.79%), Postives = 142/173 (82.08%), Query Frame = 0


Query: 44  DRAMEAYGKGANDFKSTKRFADDFMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGV 103
           D A E  GKGA + KS KRFAD  MPH+LNLYGSSA   DF++YA +ASFEDPLT A GV
Sbjct: 2   DPARECEGKGACELKSNKRFADKIMPHLLNLYGSSAKANDFDMYAPNASFEDPLTHAQGV 61

Query: 104 KEIKSAFYSLSKVFSESRIVEYTVKEERISPRKREIIVDCKQYYKFLGRDIDLESLIKLY 163
           K+IKSAFYSL KVF ES+IVEY ++E   SP K+EI++D KQ+YK +GR+ID+ SLIKLY
Sbjct: 62  KQIKSAFYSLPKVFGESKIVEYHIQESETSPGKKEILIDNKQHYKIMGRNIDMISLIKLY 121

Query: 164 VVEGKIVRHEDWWNKKPLLNRETITLPMVGRVLEMSRRCTMLATHAMMGFGKD 217
           V +GKIVRHEDWW+KKPL NR+T++ P+VGRV+EM RR  MLATHAMMGFGKD
Sbjct: 122 VEDGKIVRHEDWWDKKPLRNRDTVSFPLVGRVMEMGRRGLMLATHAMMGFGKD 174

The following BLAST results are available for this feature:

BLAST of Sed0002245 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6601231.1	3.4e-88	84.65	Exocyst complex component EXO70A1, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_008446746.1	7.3e-83	76.61	PREDICTED: uncharacterized protein LOC103489375 isoform X2 [Cucumis melo]	[more]
XP_004135041.1	1.3e-82	76.15	uncharacterized protein LOC101206496 isoform X2 [Cucumis sativus] >KGN52177.1 hy...	[more]
XP_022957109.1	1.8e-81	85.71	uncharacterized protein LOC111458589 [Cucurbita moschata] >KAG7032022.1 hypothet...	[more]
XP_016900182.1	1.2e-80	73.89	PREDICTED: uncharacterized protein LOC103489375 isoform X1 [Cucumis melo]	[more]

BLAST of Sed0002245 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0002245 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BFU1	3.6e-83	76.61	uncharacterized protein LOC103489375 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KUR1	6.1e-83	76.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G613550 PE=4 SV=1	[more]
A0A6J1H109	8.8e-82	85.71	uncharacterized protein LOC111458589 OS=Cucurbita moschata OX=3662 GN=LOC1114585...	[more]
A0A1S4DW20	5.7e-81	73.89	uncharacterized protein LOC103489375 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1JHF8	2.2e-80	84.07	uncharacterized protein LOC111484382 OS=Cucurbita maxima OX=3661 GN=LOC111484382...	[more]

BLAST of Sed0002245 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04830.1	2.3e-66	68.79	Nuclear transport factor 2 (NTF2) family protein	[more]
AT5G04830.2	2.3e-66	68.79	Nuclear transport factor 2 (NTF2) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34213	NUCLEAR TRANSPORT FACTOR 2 (NTF2) FAMILY PROTEIN	coord: 9..182
IPR032710	NTF2-like domain superfamily	SUPERFAMILY	54427	NTF2-like	coord: 32..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0002245.1	Sed0002245.1	mRNA
Sed0002245.2	Sed0002245.2	mRNA
Sed0002245.3	Sed0002245.3	mRNA