Homology
BLAST of Sed0002244 vs. NCBI nr
Match:
XP_022134939.1 (dicer-like protein 4 isoform X1 [Momordica charantia])
HSP 1 Score: 2687.1 bits (6964), Expect = 0.0e+00
Identity = 1369/1640 (83.48%), Postives = 1471/1640 (89.70%), Query Frame = 0
Query: 68 DNSKPSSLA-VEKLMGLSLVGDPGAGSSSRASEKDPRRVARKYQLELCKKALEENIIVYL 127
DN + +SL VE +GLSLV D G SSRASEKDPRR ARKYQLELCKKALEENII+YL
Sbjct: 15 DNFQHTSLGPVESFVGLSLVDDQEPGPSSRASEKDPRRKARKYQLELCKKALEENIILYL 74
Query: 128 GTGCGKTHIAILLIYEMRNLIRRSQKGICVFLAPTVALVQQQAKVIEDSIDFKVRVYCGG 187
GTGCGKTHIA+LL+YEMR+LIRRSQKGICVFLAPTVALVQQQAKVIEDS DFKVRVYCGG
Sbjct: 75 GTGCGKTHIAVLLMYEMRHLIRRSQKGICVFLAPTVALVQQQAKVIEDSTDFKVRVYCGG 134
Query: 188 FKGLNSHYDWEREMEEHEVFVMTPQTLLRSLNHCYIKMEFVELLIFDECHHAQVKSDHSY 247
K LNSHYDWEREMEEHEVFVMTP+ LLR+L+HCYIKMEFVELLIFDECHHAQVKSDHSY
Sbjct: 135 SKCLNSHYDWEREMEEHEVFVMTPEILLRTLHHCYIKMEFVELLIFDECHHAQVKSDHSY 194
Query: 248 AQIMKVFYKGSVAKRPRIFGMTASPVVGKGTCNQQSLSKSINSLEKLLDAKVYSVEDRED 307
A+IM+VFYK +VAKRPRIFGMTASPVVGKG CNQQ+LSKSINSLEKLLDAKVYSVEDRE+
Sbjct: 195 AEIMRVFYKTNVAKRPRIFGMTASPVVGKGACNQQNLSKSINSLEKLLDAKVYSVEDREE 254
Query: 308 LEAFVSSPLVKIYYYGPVANGSSSSFMTYCCQLEEVKRQCVVALGQMKGEHEGLLATKKL 367
L+AFVSSPLVKIYYYGPVANG S SFMTYC LE++KRQC+V LGQMKGEHE L ATKKL
Sbjct: 255 LDAFVSSPLVKIYYYGPVANGLSGSFMTYCSLLEDMKRQCIVVLGQMKGEHEDLRATKKL 314
Query: 368 LLRMHDNIIFCLENLGVWGALQASKILLSGDNSERSELIEAAEGNPNNDSLSDRYLNQAA 427
L RMHDNIIFCLENLGVWGALQASKILLSGDNSERSELIEAAEGNPNN SLSDRYLNQAA
Sbjct: 315 LCRMHDNIIFCLENLGVWGALQASKILLSGDNSERSELIEAAEGNPNNHSLSDRYLNQAA 374
Query: 428 EILASGCKIDGGMPDMLNVDILEDPFFSKKLLRLIGILSSFGHRLNMKCIIFVNRIVIAR 487
EILA GCKI GGM D LN DILE PFFSKKLL+LI ILSSF HRLNMKCIIFVNRIVIAR
Sbjct: 375 EILAKGCKIGGGMSDTLNADILEYPFFSKKLLQLIEILSSFRHRLNMKCIIFVNRIVIAR 434
Query: 488 SLSYILQNLKFLAYWKCDFLVGVHSKLRSMSRKTMNRILTKFRSGELNLLIATKVGEEGL 547
SLSYILQNL+FLA+WKCD+LVGVHSKLRSMSRKTMN IL KFRSGELNLL+ATKVGEEGL
Sbjct: 435 SLSYILQNLEFLAFWKCDYLVGVHSKLRSMSRKTMNHILMKFRSGELNLLVATKVGEEGL 494
Query: 548 DIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAFIVDRGNEKERGLIDGFQKDENHMN 607
DIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAF+VD GNEKE GLID FQKDEN M+
Sbjct: 495 DIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAFLVDSGNEKELGLIDEFQKDENRMD 554
Query: 608 REISSRSSNETFQSHEESIYRVVSTGASVTSGLSISLLHEYCSKLPHDEYFDPKPKFFYY 667
REISSRSS+E F SHEESIYRV STGAS+TSG SISLLHE+CSKLPHDEYFDPKPKFFYY
Sbjct: 555 REISSRSSSEIFNSHEESIYRVASTGASITSGRSISLLHEFCSKLPHDEYFDPKPKFFYY 614
Query: 668 DDLEGTICHAILPSNAPIPQVVSRVQFSRDAAKKDACLKAIEELHKLGAFNDFLLPMRDN 727
DDL GT+CHAILPSNAPI Q++SR Q SR+ AKKDAC+KAIEELHKLGA NDFLLPMRD+
Sbjct: 615 DDLAGTVCHAILPSNAPIHQIISRTQPSREGAKKDACIKAIEELHKLGALNDFLLPMRDD 674
Query: 728 AIEEELELASCDSDSSEDETSRRELHEMLVPTALKDSWTGSGNVILNCYQIKISPHPGDR 787
A EEELEL S DSD SEDETSR ELHEMLVP ALKDSWTGSG ILNCYQIK SPHP DR
Sbjct: 675 ANEEELELDSSDSDRSEDETSRGELHEMLVPAALKDSWTGSGYFILNCYQIKFSPHPRDR 734
Query: 788 IYKEFGLFVKAPLPQEAERIDLELHLARSRYVKVNLVPSGVVELLEDEITQAESFQEMFL 847
IYKEFGLFVKA LPQEAER+D+ELHLAR R V VNLVPSGVVELLEDEITQAESFQEMFL
Sbjct: 735 IYKEFGLFVKAALPQEAERMDIELHLARGRSVMVNLVPSGVVELLEDEITQAESFQEMFL 794
Query: 848 KVILDRSEFVQDYVPLRNNVSGSISSASYLLLPMIFQDNEGSSLIDWKVIRRCLSSQIFQ 907
KVILDRSEFVQ+++PLRNNVS SISS SYLLLP+IF DNE S IDWKVIRRCL S IFQ
Sbjct: 795 KVILDRSEFVQEFIPLRNNVSKSISSTSYLLLPLIFHDNERSVSIDWKVIRRCLFSPIFQ 854
Query: 908 NHACSAVRETASSDTHLTLYDGRRRLCDIENSLVYVPYKREFFFVTHIVRSKNGYSR--Y 967
S V+ETA S HLTLYDGRRR DI+NSLVYVPYKREFFFVT IV+ KNGYSR Y
Sbjct: 855 IPG-SIVKETACSHAHLTLYDGRRRTSDIKNSLVYVPYKREFFFVTDIVKGKNGYSRSHY 914
Query: 968 KNSGSLSHFEHLLERFDIHLKYPEQPLLCAKPLFHLHNLLHDRRLNDSEACDLIEHLIDL 1027
KNS S SHFEHL+ERF IHLKYPEQPLL AKPLFHLHNLLHDRR +SEAC L E+ IDL
Sbjct: 915 KNSSSSSHFEHLIERFGIHLKYPEQPLLSAKPLFHLHNLLHDRRQGNSEACYLQEYFIDL 974
Query: 1028 PPELCQLKITGFTKDIGSSISLLPSFMHHLENFLVAIELKCTLAAAFPAASEVTSNRILE 1087
PPELCQLKI GF+KDIGSSISLLPS MH LEN LVAIELKC LAAAFP +EVT+NRILE
Sbjct: 975 PPELCQLKIIGFSKDIGSSISLLPSIMHRLENLLVAIELKCMLAAAFPDGAEVTANRILE 1034
Query: 1088 ALTTEKCQERISLERLEILGDAFLKFAVARHLFLTHDKFDEGELTRRRSYLVKNINLFKL 1147
ALTTEKCQERISLERLEILGD FLKFAVAR+LFLTHDK DEGELTRRRSYLVKNINLFKL
Sbjct: 1035 ALTTEKCQERISLERLEILGDGFLKFAVARYLFLTHDKSDEGELTRRRSYLVKNINLFKL 1094
Query: 1148 ATRKNLQVYIRDQPFEPNQFYSLGRPCPRICNEETRKDIHSH----KNAKGGETKCSKGH 1207
ATRKNLQVYIRDQPFEP+QFY+LGRPCPRICNEETR+DIHSH KNA+ ETKCS+GH
Sbjct: 1095 ATRKNLQVYIRDQPFEPSQFYTLGRPCPRICNEETREDIHSHCNATKNAQASETKCSRGH 1154
Query: 1208 HWLHKKTISDVVEALVGAFLVDSGFKAAIAFLKWIGIQVEFEASQVTDARMASNAYLRLA 1267
HWLHKKTISDVVEALVGAFLVDSGFKAAI+FLKWIGIQVEFEAS VT+A M+SNAY+ LA
Sbjct: 1155 HWLHKKTISDVVEALVGAFLVDSGFKAAISFLKWIGIQVEFEASLVTNALMSSNAYIILA 1214
Query: 1268 DCISISALQDSLGHQFLYKGLLLQALIHPSYHRHGGGCYQRLEFLGDAVLDYLITSYLYS 1327
D I+IS LQ+SLGHQFL+KGLLLQAL+HPSYH+HGGGCYQRLEFLGDAVLDYLITSYLYS
Sbjct: 1215 DRINISVLQNSLGHQFLHKGLLLQALVHPSYHKHGGGCYQRLEFLGDAVLDYLITSYLYS 1274
Query: 1328 VYPKLKPGLVTDLRSVFVMNEAFANISVDRFFYKFLICDSTSLQKDIKSYVNFIKSPPSE 1387
YPKLKPGL+TDLRSVFV NEAFAN++VDR FYK+LICDSTSLQ DIKSYVNFIK+P S
Sbjct: 1275 AYPKLKPGLLTDLRSVFVRNEAFANVAVDRSFYKYLICDSTSLQSDIKSYVNFIKAPSSG 1334
Query: 1388 RGSLEQPTCPKVLGDMVESIVGAVLVDTGFDMNYVWKIMLSFLDSIMSFSGFQLSPIRDI 1447
GSL P+CPK LGD+VES VGAVLVDTGFDMNYVWKIMLSFLD I+SFSGFQLSPIRDI
Sbjct: 1335 SGSLGLPSCPKALGDLVESCVGAVLVDTGFDMNYVWKIMLSFLDPIISFSGFQLSPIRDI 1394
Query: 1448 TEFCQDCGWKLQFNATKVEKYFSVKAEVKGNNFHETASAANRRKKDAEKIAANLILSKLK 1507
EFCQDCG LQFN +K KY+SV+A+VKG+NFH TASAA+RRK+DA+KIAANLIL+KLK
Sbjct: 1395 IEFCQDCGSNLQFNESKTGKYYSVEADVKGDNFHATASAAHRRKRDAKKIAANLILTKLK 1454
Query: 1508 EKGFIPEVSSLEEILRSRKKMEPELIGFDETPSVSIDQADNGSGTIPGSEHSGAELDPCV 1567
+G IPEV+SLEEIL+S +KMEP+LIG+DETPSV++DQADNG GTI G E SGA+LDP V
Sbjct: 1455 AQGLIPEVNSLEEILKSSRKMEPKLIGYDETPSVTMDQADNGFGTIKGLESSGADLDPFV 1514
Query: 1568 NSEFSNSHSVRITRLSEAPEFSSVAAEEELKPS-TFGG----TNLQSSSGRSSKTTARSR 1627
+SE N+H RITR+S+ SS AA+E+L PS F G T++QSSSGR K TARSR
Sbjct: 1515 HSEVGNAHPARITRISKMLVSSSGAAQEQLDPSLAFDGHDSPTDVQSSSGRLCKATARSR 1574
Query: 1628 LYEICAANHWNQPSFDCMNEEGPGHLKMFTYKVVLEIEEAPDTIFEFFGASHSRKKAAAE 1687
LYEICAANHW+ PSFDCMNEEGP HLKMFTYKVVLEIEEAPDTIF+FFGA H RKKAAAE
Sbjct: 1575 LYEICAANHWSPPSFDCMNEEGPSHLKMFTYKVVLEIEEAPDTIFKFFGAPHLRKKAAAE 1634
Query: 1688 HAAEAALWYLKKEGYWNETD 1696
HAAEAA+WYLKKEGY ETD
Sbjct: 1635 HAAEAAIWYLKKEGYLPETD 1653
BLAST of Sed0002244 vs. NCBI nr
Match:
XP_038879795.1 (dicer-like protein 4 isoform X2 [Benincasa hispida])
HSP 1 Score: 2678.7 bits (6942), Expect = 0.0e+00
Identity = 1355/1639 (82.67%), Postives = 1462/1639 (89.20%), Query Frame = 0
Query: 65 DFIDNSKPSSLAVEKLMGLSLVGDPGAGSSSRASEKDPRRVARKYQLELCKKALEENIIV 124
D ++ + VE+ MGLS D AGSS+R SEKDPRR+ARKYQLELCKKALEENIIV
Sbjct: 12 DSVNFQPTGFVPVERFMGLSQNDDQAAGSSTRTSEKDPRRIARKYQLELCKKALEENIIV 71
Query: 125 YLGTGCGKTHIAILLIYEMRNLIRRSQKGICVFLAPTVALVQQQAKVIEDSIDFKVRVYC 184
YLGTGCGKTHIAILLIYEM +LIRRSQKGICVFLAPTVALVQQQAKVIEDS DFKVRVYC
Sbjct: 72 YLGTGCGKTHIAILLIYEMSHLIRRSQKGICVFLAPTVALVQQQAKVIEDSTDFKVRVYC 131
Query: 185 GGFKGLNSHYDWEREMEEHEVFVMTPQTLLRSLNHCYIKMEFVELLIFDECHHAQVKSDH 244
GG K LN+HYDWE EMEE+EVFVMTP+ LLR+L+HCYIKM+FVELLIFDECHHAQVKSDH
Sbjct: 132 GGSKCLNTHYDWETEMEEYEVFVMTPEILLRNLHHCYIKMDFVELLIFDECHHAQVKSDH 191
Query: 245 SYAQIMKVFYKGSVAKRPRIFGMTASPVVGKGTCNQQSLSKSINSLEKLLDAKVYSVEDR 304
SYA+IM+VFYK + KRPRIFGMTASPVVGKG CNQQ+LS+SINSLEKLLDAKVYSVE R
Sbjct: 192 SYAEIMRVFYKANEPKRPRIFGMTASPVVGKGACNQQNLSRSINSLEKLLDAKVYSVEAR 251
Query: 305 EDLEAFVSSPLVKIYYYGPVANGSSSSFMTYCCQLEEVKRQCVVALGQMKGEHEGLLATK 364
E+L+AFV SPLVKIYYYGPVANGSSSSFMTYCC LE++K +C++ALGQMK EHE LLATK
Sbjct: 252 EELDAFVLSPLVKIYYYGPVANGSSSSFMTYCCLLEDIKHKCILALGQMKCEHEVLLATK 311
Query: 365 KLLLRMHDNIIFCLENLGVWGALQASKILLSGDNSERSELIEAAEGNPNNDSLSDRYLNQ 424
+LL RMH NIIFCLE+LGVWGALQASKILLSGDNSE+SELIEAAEGN NDSLSD+YLNQ
Sbjct: 312 RLLCRMHKNIIFCLESLGVWGALQASKILLSGDNSEQSELIEAAEGNLKNDSLSDKYLNQ 371
Query: 425 AAEILASGCKIDGGMPDMLNVDILEDPFFSKKLLRLIGILSSFGHRLNMKCIIFVNRIVI 484
AAE+ ASGCKIDGGM DMLNVDILEDPFFSKKLLRLIGILSSF HRLNMKCIIFVNRIVI
Sbjct: 372 AAEVFASGCKIDGGMSDMLNVDILEDPFFSKKLLRLIGILSSFRHRLNMKCIIFVNRIVI 431
Query: 485 ARSLSYILQNLKFLAYWKCDFLVGVHSKLRSMSRKTMNRILTKFRSGELNLLIATKVGEE 544
ARSLSYILQNL FL+YWKCDFLVGVHSKLRSMSRKTM+ ILTKF+SGELNLLIATKVGEE
Sbjct: 432 ARSLSYILQNLNFLSYWKCDFLVGVHSKLRSMSRKTMSHILTKFQSGELNLLIATKVGEE 491
Query: 545 GLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAFIVDRGNEKERGLIDGFQKDENH 604
GLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAF+VD GNEKE GLID FQKDEN
Sbjct: 492 GLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAFLVDSGNEKELGLIDEFQKDENR 551
Query: 605 MNREISSRSSNETFQSHEESIYRVVSTGASVTSGLSISLLHEYCSKLPHDEYFDPKPKFF 664
MNREISSRSSNETF SHEESIYRVVSTGAS+TSG SISLLHEYCSKLPHDEYFDPKPKFF
Sbjct: 552 MNREISSRSSNETFCSHEESIYRVVSTGASITSGRSISLLHEYCSKLPHDEYFDPKPKFF 611
Query: 665 YYDDLEGTICHAILPSNAPIPQVVSRVQFSRDAAKKDACLKAIEELHKLGAFNDFLLPMR 724
YYDDLEGT+CHAILPSNAPI Q+VS Q SRDAAKK ACLKA+EELHKLGA ND+LLPMR
Sbjct: 612 YYDDLEGTVCHAILPSNAPITQIVSGAQSSRDAAKKVACLKAVEELHKLGALNDYLLPMR 671
Query: 725 DNAIEEELELASCDSDSSEDETSRRELHEMLVPTALKDSWTGSGNVILNCYQIKISPHPG 784
DNA E+ELEL S DSDSS+DE SRRELHEM+ P ALK+SWTGS ++L CY IK +PHP
Sbjct: 672 DNADEKELELDSSDSDSSKDENSRRELHEMIFPAALKESWTGSEYLVLYCYHIKFTPHPR 731
Query: 785 DRIYKEFGLFVKAPLPQEAERIDLELHLARSRYVKVNLVPSGVVELLEDEITQAESFQEM 844
DRIYKEFGLFVKAPLP+EAER+DLELHLAR R V+VNL+PSGVVELLEDEI QAESFQEM
Sbjct: 732 DRIYKEFGLFVKAPLPEEAERMDLELHLARRRSVRVNLMPSGVVELLEDEIIQAESFQEM 791
Query: 845 FLKVILDRSEFVQDYVPLRNNVSGSISSASYLLLPMIFQDNEGSSLIDWKVIRRCLSSQI 904
FLKVILDRSEFVQ+Y+PLRNN S SIS SYLLLP+ F DNE S +IDW+VI+RCLSSQI
Sbjct: 792 FLKVILDRSEFVQEYIPLRNNDSRSISPTSYLLLPVTFHDNEESVIIDWRVIKRCLSSQI 851
Query: 905 FQNHACSAVRETASSDTHLTLYDGRRRLCDIENSLVYVPYKREFFFVTHIVRSKNGYSRY 964
FQNHACS V+E ASS THLTLYDGRRR DIENSLVYVPYK EFFFVT+IV KNGYS+Y
Sbjct: 852 FQNHACSIVKEAASSYTHLTLYDGRRRSNDIENSLVYVPYKGEFFFVTNIVWGKNGYSQY 911
Query: 965 KNSGSLSHFEHLLERFDIHLKYPEQPLLCAKPLFHLHNLLHDRRLNDSEACDLIEHLIDL 1024
KNSGS SHFEHL +F IHLK PEQPLLCAKPLF LHNLLH+R+ DS+A L E+ IDL
Sbjct: 912 KNSGSSSHFEHLRSKFGIHLKSPEQPLLCAKPLFFLHNLLHNRKQEDSDAHYLEEYFIDL 971
Query: 1025 PPELCQLKITGFTKDIGSSISLLPSFMHHLENFLVAIELKCTLAAAFPAASEVTSNRILE 1084
PPELCQLKI GF+KDIGSSISLLPS MH LEN LVAIELKC LAAAFPA +EVT+NRILE
Sbjct: 972 PPELCQLKICGFSKDIGSSISLLPSIMHRLENLLVAIELKCRLAAAFPAGAEVTANRILE 1031
Query: 1085 ALTTEKCQERISLERLEILGDAFLKFAVARHLFLTHDKFDEGELTRRRSYLVKNINLFKL 1144
ALTTEKCQERISLERLEILGD+FLKFAVAR+LFLTHDKFDEGELTRRRSYLVKN NL KL
Sbjct: 1032 ALTTEKCQERISLERLEILGDSFLKFAVARYLFLTHDKFDEGELTRRRSYLVKNFNLLKL 1091
Query: 1145 ATRKNLQVYIRDQPFEPNQFYSLGRPCPRICNEETRKDIHSH---KNAKGGETKCSKGHH 1204
ATRKNLQVYIRDQPFEP+QFY LGRPCPRICNEETRKDIHSH N + ETKCSKGHH
Sbjct: 1092 ATRKNLQVYIRDQPFEPSQFYLLGRPCPRICNEETRKDIHSHDDATNTRASETKCSKGHH 1151
Query: 1205 WLHKKTISDVVEALVGAFLVDSGFKAAIAFLKWIGIQVEFEASQVTDARMASNAYLRLAD 1264
WL KKTISDVVEALVGAFLVDSGFKAAIAFLKWIGIQVEFE+S VTDA MASN Y+ LAD
Sbjct: 1152 WLQKKTISDVVEALVGAFLVDSGFKAAIAFLKWIGIQVEFESSLVTDALMASNNYVLLAD 1211
Query: 1265 CISISALQDSLGHQFLYKGLLLQALIHPSYHRHGGGCYQRLEFLGDAVLDYLITSYLYSV 1324
ISA QDSLGHQFL+KGLLLQAL+HPSYH+HGGGCYQRLEFLGDAVLDYLITSYLYS
Sbjct: 1212 RTDISAFQDSLGHQFLHKGLLLQALVHPSYHKHGGGCYQRLEFLGDAVLDYLITSYLYSA 1271
Query: 1325 YPKLKPGLVTDLRSVFVMNEAFANISVDRFFYKFLICDSTSLQKDIKSYVNFIKSPPSER 1384
YPKLKPG +TDLRSVFV NEAFAN++VDRFFYKFL+CDSTSL DIKSYV+FIKS PSER
Sbjct: 1272 YPKLKPGQLTDLRSVFVRNEAFANVTVDRFFYKFLLCDSTSLLSDIKSYVDFIKS-PSER 1331
Query: 1385 GSLEQPTCPKVLGDMVESIVGAVLVDTGFDMNYVWKIMLSFLDSIMSFSGFQLSPIRDIT 1444
SLEQP CPK LGD+VES VGAVLVDTGFDMNYVWKIMLSF+D IMSFSGFQLSPIRD+
Sbjct: 1332 DSLEQPRCPKALGDLVESSVGAVLVDTGFDMNYVWKIMLSFVDPIMSFSGFQLSPIRDLI 1391
Query: 1445 EFCQDCGWKLQFNATKVEKYFSVKAEVKGNNFHETASAANRRKKDAEKIAANLILSKLKE 1504
EFCQ+CGWKL+FN++K+E Y+SVKAEVKG NFH+TASAANRRKKDAEKIAANLIL+KLK
Sbjct: 1392 EFCQNCGWKLEFNSSKMEGYYSVKAEVKGGNFHDTASAANRRKKDAEKIAANLILTKLKA 1451
Query: 1505 KGFIPEVSSLEEILRSRKKMEPELIGFDETPSVSIDQADNGSGTIPGSEHSGAELDPCVN 1564
KGF+PEV+SLEEIL+S +MEP+LIG+DETP +DQ DNG TI G E S A+L+P V+
Sbjct: 1452 KGFLPEVNSLEEILKSSSRMEPKLIGYDETPFGMVDQVDNGLETINGPEFSNADLNPRVH 1511
Query: 1565 SEFSNSHSVRITRLSEAPEFSSVAAEEELKPSTF-----GGTNLQSSSGRSSKTTARSRL 1624
E NSH V ITR+S P SSVAA E+LKPS +LQSSSG S KTTARSRL
Sbjct: 1512 REVDNSHPVHITRISRTPVSSSVAAGEQLKPSMALEGHDSPADLQSSSGWSGKTTARSRL 1571
Query: 1625 YEICAANHWNQPSFDCMNEEGPGHLKMFTYKVVLEIEEAPDTIFEFFGASHSRKKAAAEH 1684
YEICAANHWN+PSFDCMNEEGP HLKMFTYKVVLE+EEAPDTIFEF GA H RKKAAAEH
Sbjct: 1572 YEICAANHWNRPSFDCMNEEGPSHLKMFTYKVVLEMEEAPDTIFEFVGAPHLRKKAAAEH 1631
Query: 1685 AAEAALWYLKKEGYWNETD 1696
AAEAALWYLKK GY ETD
Sbjct: 1632 AAEAALWYLKKAGYLPETD 1649
BLAST of Sed0002244 vs. NCBI nr
Match:
XP_038879794.1 (dicer-like protein 4 isoform X1 [Benincasa hispida])
HSP 1 Score: 2676.4 bits (6936), Expect = 0.0e+00
Identity = 1356/1640 (82.68%), Postives = 1463/1640 (89.21%), Query Frame = 0
Query: 65 DFIDNSKPSSLAVEKLMGLSLVGDPGAGSSSRASEKDPRRVARKYQLELCKKALEENIIV 124
D ++ + VE+ MGLS D AGSS+R SEKDPRR+ARKYQLELCKKALEENIIV
Sbjct: 12 DSVNFQPTGFVPVERFMGLSQNDDQAAGSSTRTSEKDPRRIARKYQLELCKKALEENIIV 71
Query: 125 YLGTGCGKTHIAILLIYEMRNLIRRSQKGICVFLAPTVALVQQQAKVIEDSIDFKVRVYC 184
YLGTGCGKTHIAILLIYEM +LIRRSQKGICVFLAPTVALVQQQAKVIEDS DFKVRVYC
Sbjct: 72 YLGTGCGKTHIAILLIYEMSHLIRRSQKGICVFLAPTVALVQQQAKVIEDSTDFKVRVYC 131
Query: 185 GGFKGLNSHYDWEREMEEHEVFVMTPQTLLRSLNHCYIKMEFVELLIFDECHHAQVKSDH 244
GG K LN+HYDWE EMEE+EVFVMTP+ LLR+L+HCYIKM+FVELLIFDECHHAQVKSDH
Sbjct: 132 GGSKCLNTHYDWETEMEEYEVFVMTPEILLRNLHHCYIKMDFVELLIFDECHHAQVKSDH 191
Query: 245 SYAQIMKVFYKGSVAKRPRIFGMTASPVVGKGTCNQQSLSKSINSLEKLLDAKVYSVEDR 304
SYA+IM+VFYK + KRPRIFGMTASPVVGKG CNQQ+LS+SINSLEKLLDAKVYSVE R
Sbjct: 192 SYAEIMRVFYKANEPKRPRIFGMTASPVVGKGACNQQNLSRSINSLEKLLDAKVYSVEAR 251
Query: 305 EDLEAFVSSPLVKIYYYGPVANGSSSSFMTYCCQLEEVK-RQCVVALGQMKGEHEGLLAT 364
E+L+AFV SPLVKIYYYGPVANGSSSSFMTYCC LE++K +QC++ALGQMK EHE LLAT
Sbjct: 252 EELDAFVLSPLVKIYYYGPVANGSSSSFMTYCCLLEDIKHKQCILALGQMKCEHEVLLAT 311
Query: 365 KKLLLRMHDNIIFCLENLGVWGALQASKILLSGDNSERSELIEAAEGNPNNDSLSDRYLN 424
K+LL RMH NIIFCLE+LGVWGALQASKILLSGDNSE+SELIEAAEGN NDSLSD+YLN
Sbjct: 312 KRLLCRMHKNIIFCLESLGVWGALQASKILLSGDNSEQSELIEAAEGNLKNDSLSDKYLN 371
Query: 425 QAAEILASGCKIDGGMPDMLNVDILEDPFFSKKLLRLIGILSSFGHRLNMKCIIFVNRIV 484
QAAE+ ASGCKIDGGM DMLNVDILEDPFFSKKLLRLIGILSSF HRLNMKCIIFVNRIV
Sbjct: 372 QAAEVFASGCKIDGGMSDMLNVDILEDPFFSKKLLRLIGILSSFRHRLNMKCIIFVNRIV 431
Query: 485 IARSLSYILQNLKFLAYWKCDFLVGVHSKLRSMSRKTMNRILTKFRSGELNLLIATKVGE 544
IARSLSYILQNL FL+YWKCDFLVGVHSKLRSMSRKTM+ ILTKF+SGELNLLIATKVGE
Sbjct: 432 IARSLSYILQNLNFLSYWKCDFLVGVHSKLRSMSRKTMSHILTKFQSGELNLLIATKVGE 491
Query: 545 EGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAFIVDRGNEKERGLIDGFQKDEN 604
EGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAF+VD GNEKE GLID FQKDEN
Sbjct: 492 EGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAFLVDSGNEKELGLIDEFQKDEN 551
Query: 605 HMNREISSRSSNETFQSHEESIYRVVSTGASVTSGLSISLLHEYCSKLPHDEYFDPKPKF 664
MNREISSRSSNETF SHEESIYRVVSTGAS+TSG SISLLHEYCSKLPHDEYFDPKPKF
Sbjct: 552 RMNREISSRSSNETFCSHEESIYRVVSTGASITSGRSISLLHEYCSKLPHDEYFDPKPKF 611
Query: 665 FYYDDLEGTICHAILPSNAPIPQVVSRVQFSRDAAKKDACLKAIEELHKLGAFNDFLLPM 724
FYYDDLEGT+CHAILPSNAPI Q+VS Q SRDAAKK ACLKA+EELHKLGA ND+LLPM
Sbjct: 612 FYYDDLEGTVCHAILPSNAPITQIVSGAQSSRDAAKKVACLKAVEELHKLGALNDYLLPM 671
Query: 725 RDNAIEEELELASCDSDSSEDETSRRELHEMLVPTALKDSWTGSGNVILNCYQIKISPHP 784
RDNA E+ELEL S DSDSS+DE SRRELHEM+ P ALK+SWTGS ++L CY IK +PHP
Sbjct: 672 RDNADEKELELDSSDSDSSKDENSRRELHEMIFPAALKESWTGSEYLVLYCYHIKFTPHP 731
Query: 785 GDRIYKEFGLFVKAPLPQEAERIDLELHLARSRYVKVNLVPSGVVELLEDEITQAESFQE 844
DRIYKEFGLFVKAPLP+EAER+DLELHLAR R V+VNL+PSGVVELLEDEI QAESFQE
Sbjct: 732 RDRIYKEFGLFVKAPLPEEAERMDLELHLARRRSVRVNLMPSGVVELLEDEIIQAESFQE 791
Query: 845 MFLKVILDRSEFVQDYVPLRNNVSGSISSASYLLLPMIFQDNEGSSLIDWKVIRRCLSSQ 904
MFLKVILDRSEFVQ+Y+PLRNN S SIS SYLLLP+ F DNE S +IDW+VI+RCLSSQ
Sbjct: 792 MFLKVILDRSEFVQEYIPLRNNDSRSISPTSYLLLPVTFHDNEESVIIDWRVIKRCLSSQ 851
Query: 905 IFQNHACSAVRETASSDTHLTLYDGRRRLCDIENSLVYVPYKREFFFVTHIVRSKNGYSR 964
IFQNHACS V+E ASS THLTLYDGRRR DIENSLVYVPYK EFFFVT+IV KNGYS+
Sbjct: 852 IFQNHACSIVKEAASSYTHLTLYDGRRRSNDIENSLVYVPYKGEFFFVTNIVWGKNGYSQ 911
Query: 965 YKNSGSLSHFEHLLERFDIHLKYPEQPLLCAKPLFHLHNLLHDRRLNDSEACDLIEHLID 1024
YKNSGS SHFEHL +F IHLK PEQPLLCAKPLF LHNLLH+R+ DS+A L E+ ID
Sbjct: 912 YKNSGSSSHFEHLRSKFGIHLKSPEQPLLCAKPLFFLHNLLHNRKQEDSDAHYLEEYFID 971
Query: 1025 LPPELCQLKITGFTKDIGSSISLLPSFMHHLENFLVAIELKCTLAAAFPAASEVTSNRIL 1084
LPPELCQLKI GF+KDIGSSISLLPS MH LEN LVAIELKC LAAAFPA +EVT+NRIL
Sbjct: 972 LPPELCQLKICGFSKDIGSSISLLPSIMHRLENLLVAIELKCRLAAAFPAGAEVTANRIL 1031
Query: 1085 EALTTEKCQERISLERLEILGDAFLKFAVARHLFLTHDKFDEGELTRRRSYLVKNINLFK 1144
EALTTEKCQERISLERLEILGD+FLKFAVAR+LFLTHDKFDEGELTRRRSYLVKN NL K
Sbjct: 1032 EALTTEKCQERISLERLEILGDSFLKFAVARYLFLTHDKFDEGELTRRRSYLVKNFNLLK 1091
Query: 1145 LATRKNLQVYIRDQPFEPNQFYSLGRPCPRICNEETRKDIHSH---KNAKGGETKCSKGH 1204
LATRKNLQVYIRDQPFEP+QFY LGRPCPRICNEETRKDIHSH N + ETKCSKGH
Sbjct: 1092 LATRKNLQVYIRDQPFEPSQFYLLGRPCPRICNEETRKDIHSHDDATNTRASETKCSKGH 1151
Query: 1205 HWLHKKTISDVVEALVGAFLVDSGFKAAIAFLKWIGIQVEFEASQVTDARMASNAYLRLA 1264
HWL KKTISDVVEALVGAFLVDSGFKAAIAFLKWIGIQVEFE+S VTDA MASN Y+ LA
Sbjct: 1152 HWLQKKTISDVVEALVGAFLVDSGFKAAIAFLKWIGIQVEFESSLVTDALMASNNYVLLA 1211
Query: 1265 DCISISALQDSLGHQFLYKGLLLQALIHPSYHRHGGGCYQRLEFLGDAVLDYLITSYLYS 1324
D ISA QDSLGHQFL+KGLLLQAL+HPSYH+HGGGCYQRLEFLGDAVLDYLITSYLYS
Sbjct: 1212 DRTDISAFQDSLGHQFLHKGLLLQALVHPSYHKHGGGCYQRLEFLGDAVLDYLITSYLYS 1271
Query: 1325 VYPKLKPGLVTDLRSVFVMNEAFANISVDRFFYKFLICDSTSLQKDIKSYVNFIKSPPSE 1384
YPKLKPG +TDLRSVFV NEAFAN++VDRFFYKFL+CDSTSL DIKSYV+FIKS PSE
Sbjct: 1272 AYPKLKPGQLTDLRSVFVRNEAFANVTVDRFFYKFLLCDSTSLLSDIKSYVDFIKS-PSE 1331
Query: 1385 RGSLEQPTCPKVLGDMVESIVGAVLVDTGFDMNYVWKIMLSFLDSIMSFSGFQLSPIRDI 1444
R SLEQP CPK LGD+VES VGAVLVDTGFDMNYVWKIMLSF+D IMSFSGFQLSPIRD+
Sbjct: 1332 RDSLEQPRCPKALGDLVESSVGAVLVDTGFDMNYVWKIMLSFVDPIMSFSGFQLSPIRDL 1391
Query: 1445 TEFCQDCGWKLQFNATKVEKYFSVKAEVKGNNFHETASAANRRKKDAEKIAANLILSKLK 1504
EFCQ+CGWKL+FN++K+E Y+SVKAEVKG NFH+TASAANRRKKDAEKIAANLIL+KLK
Sbjct: 1392 IEFCQNCGWKLEFNSSKMEGYYSVKAEVKGGNFHDTASAANRRKKDAEKIAANLILTKLK 1451
Query: 1505 EKGFIPEVSSLEEILRSRKKMEPELIGFDETPSVSIDQADNGSGTIPGSEHSGAELDPCV 1564
KGF+PEV+SLEEIL+S +MEP+LIG+DETP +DQ DNG TI G E S A+L+P V
Sbjct: 1452 AKGFLPEVNSLEEILKSSSRMEPKLIGYDETPFGMVDQVDNGLETINGPEFSNADLNPRV 1511
Query: 1565 NSEFSNSHSVRITRLSEAPEFSSVAAEEELKPSTF-----GGTNLQSSSGRSSKTTARSR 1624
+ E NSH V ITR+S P SSVAA E+LKPS +LQSSSG S KTTARSR
Sbjct: 1512 HREVDNSHPVHITRISRTPVSSSVAAGEQLKPSMALEGHDSPADLQSSSGWSGKTTARSR 1571
Query: 1625 LYEICAANHWNQPSFDCMNEEGPGHLKMFTYKVVLEIEEAPDTIFEFFGASHSRKKAAAE 1684
LYEICAANHWN+PSFDCMNEEGP HLKMFTYKVVLE+EEAPDTIFEF GA H RKKAAAE
Sbjct: 1572 LYEICAANHWNRPSFDCMNEEGPSHLKMFTYKVVLEMEEAPDTIFEFVGAPHLRKKAAAE 1631
Query: 1685 HAAEAALWYLKKEGYWNETD 1696
HAAEAALWYLKK GY ETD
Sbjct: 1632 HAAEAALWYLKKAGYLPETD 1650
BLAST of Sed0002244 vs. NCBI nr
Match:
XP_023515970.1 (dicer-like protein 4 isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 2657.1 bits (6886), Expect = 0.0e+00
Identity = 1360/1651 (82.37%), Postives = 1460/1651 (88.43%), Query Frame = 0
Query: 64 SDFIDNSKPSSLAVEKLMGLSLVGDPGAGSSSRASEKDPRRVARKYQLELCKKALEENII 123
+D ++ SS +VE+ MGLS V D GAGSS R S KDPRR+ARKYQLELC+KALEENII
Sbjct: 11 ADSVNFQPTSSASVERFMGLSPVDDQGAGSSIRTSGKDPRRIARKYQLELCEKALEENII 70
Query: 124 VYLGTGCGKTHIAILLIYEMRNLIRRSQKGICVFLAPTVALVQQQAKVIEDSIDFKVRVY 183
VYLGTGCGKTHIAILLIYEM +LIRR QKGICVFLAPTVALVQQQAKVIEDSIDFKV+VY
Sbjct: 71 VYLGTGCGKTHIAILLIYEMGHLIRRPQKGICVFLAPTVALVQQQAKVIEDSIDFKVKVY 130
Query: 184 CGGFKGLNSHYDWEREMEEHEVFVMTPQTLLRSLNHCYIKMEFVELLIFDECHHAQVKSD 243
CGG K LNSHYDWEREMEE+EVFVMTP+ LLR+L+HCYIKMEFVELLIFDECHHAQVKSD
Sbjct: 131 CGGSKCLNSHYDWEREMEEYEVFVMTPEILLRNLHHCYIKMEFVELLIFDECHHAQVKSD 190
Query: 244 HSYAQIMKVFYKGSVAKRPRIFGMTASPVVGKGTCNQQSLSKSINSLEKLLDAKVYSVED 303
HSYA+IM+VFYK + KRPRIFGMTASPVVGKG CNQQ+LSKSINSLEKLLDAKVYSVED
Sbjct: 191 HSYAEIMRVFYKANEHKRPRIFGMTASPVVGKGACNQQNLSKSINSLEKLLDAKVYSVED 250
Query: 304 REDLEAFVSSPLVKIYYYGPVANGSSSSFMTYCCQLEEVKRQCVVALGQMKGEHEGLLAT 363
RE+LEAFVSSP KIYYYGPVA GSSSSFMTYCC LE+VK QC+VALGQMKGEHEGLLAT
Sbjct: 251 REELEAFVSSPRFKIYYYGPVATGSSSSFMTYCCPLEDVKCQCIVALGQMKGEHEGLLAT 310
Query: 364 KKLLLRMHDNIIFCLENLGVWGALQASKILLSGDNSERSELIEAAEGNPNNDSLSDRYLN 423
KKLL RMH NIIFCLENLGVWGALQASKILLS DNSERSELIEAAE NP +DS+SDRYLN
Sbjct: 311 KKLLCRMHKNIIFCLENLGVWGALQASKILLSEDNSERSELIEAAEANPKHDSISDRYLN 370
Query: 424 QAAEILASGCKIDGGMPDMLNVDILEDPFFSKKLLRLIGILSSFGHRLNMKCIIFVNRIV 483
QAAEI ASGCKID G+ DMLNVDIL++P FSKKLLRLIGILSSF HR NMKCIIFVNRIV
Sbjct: 371 QAAEIFASGCKIDAGVSDMLNVDILKEPCFSKKLLRLIGILSSFRHRPNMKCIIFVNRIV 430
Query: 484 IARSLSYILQNLKFLAYWKCDFLVGVHSKLRSMSRKTMNRILTKFRSGELNLLIATKVGE 543
IARSLSYILQNLKFLAYWKCDFLVGVHSKLRSMSRKTMN ILTKFRSGELNLLIATKVGE
Sbjct: 431 IARSLSYILQNLKFLAYWKCDFLVGVHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGE 490
Query: 544 EGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAFIVDRGNEKERGLIDGFQKDEN 603
EGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAF+VD GNEKE GLID F KDE
Sbjct: 491 EGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAFLVDSGNEKELGLIDEFHKDEK 550
Query: 604 HMNREISSRSSNETFQSHEESIYRVVSTGASVTSGLSISLLHEYCSKLPHDEYFDPKPKF 663
MNREISSRSS ETF HEESIYRVVSTGASVTSG SISLLHEYCSKLPHD YFDPKPKF
Sbjct: 551 RMNREISSRSSIETFDGHEESIYRVVSTGASVTSGRSISLLHEYCSKLPHDTYFDPKPKF 610
Query: 664 FYYDDLEGTICHAILPSNAPIPQVVSRVQFSRDAAKKDACLKAIEELHKLGAFNDFLLPM 723
FY DDL GTICHAILPSNAPIPQ+VSR Q + AAKKDACLKA+EELHKLGA +D+LLPM
Sbjct: 611 FYCDDLGGTICHAILPSNAPIPQIVSRPQPAGVAAKKDACLKAVEELHKLGALSDYLLPM 670
Query: 724 RDNAIEEELELASCDSDSSEDETSRRELHEMLVPTALKDSWTGSGNVILNCYQIKISPHP 783
RDNA E ELEL S DSDSSEDETSRRELHEM+ P A K+SWTG G VIL CY IK +P+P
Sbjct: 671 RDNANEGELELDS-DSDSSEDETSRRELHEMISPAAFKESWTGFGYVILYCYHIKFTPNP 730
Query: 784 GDRIYKEFGLFVKAPLPQEAERIDLELHLARSRYVKVNLVPSGVVELLEDEITQAESFQE 843
DRIYKEFGLFVKAPLPQEA R+DLELHLA R VKVNL+PS VVELLE+EITQAE FQE
Sbjct: 731 EDRIYKEFGLFVKAPLPQEAVRMDLELHLAHGRSVKVNLMPSRVVELLENEITQAECFQE 790
Query: 844 MFLKVILDRSEFVQDYVPLRNNVSGSISSASYLLLPMIFQDNEGSSLIDWKVIRRCLSSQ 903
MFLKVILDRSEFV DY+PLRNNVS SISS SYLLLP+I DNEGS IDWKVIRRCLSSQ
Sbjct: 791 MFLKVILDRSEFVHDYIPLRNNVSRSISSTSYLLLPVIVHDNEGSVFIDWKVIRRCLSSQ 850
Query: 904 IFQNHACSAVRETASSDTHLTLYDGRRRLCDIENSLVYVPYKREFFFVTHIVRSKNGYSR 963
IFQNHACS V+ETASSDTHL LYDGRRR DIENSLVYVPYKREFFFVT+IVR KNGYS+
Sbjct: 851 IFQNHACSIVKETASSDTHLMLYDGRRRSSDIENSLVYVPYKREFFFVTNIVRRKNGYSQ 910
Query: 964 YKNSGSLSHFEHLLERFDIHLKYPEQPLLCAKPLFHLHNLLHDRRLNDSEACDLIEHLID 1023
YK+SGSLSHFEHL RF IHLKYPEQPLLCAKPLF LHNLLH+R+ DSEA L E+ ID
Sbjct: 911 YKDSGSLSHFEHLKTRFGIHLKYPEQPLLCAKPLFSLHNLLHNRKQKDSEAPYLEEYFID 970
Query: 1024 LPPELCQLKITGFTKDIGSSISLLPSFMHHLENFLVAIELKCTLAAAFPAASEVTSNRIL 1083
+ PELCQLKITGF+KDIGSSISLLPS MH LEN LVAIELKC LAAAFPA +EVT+NRIL
Sbjct: 971 IAPELCQLKITGFSKDIGSSISLLPSIMHRLENLLVAIELKCMLAAAFPAGAEVTANRIL 1030
Query: 1084 EALTTEKCQERISLERLEILGDAFLKFAVARHLFLTHDKFDEGELTRRRSYLVKNINLFK 1143
EALTTEKCQERISLERLEILGD+FLKFAVAR+LFL HDKFDEGELTRRRSYLVKNINLFK
Sbjct: 1031 EALTTEKCQERISLERLEILGDSFLKFAVARYLFLAHDKFDEGELTRRRSYLVKNINLFK 1090
Query: 1144 LATRKNLQVYIRDQPFEPNQFYSLGRPCPRICNEETRKDIHSH----KNAKGGETKCSKG 1203
LATRKNLQVYIRDQPFEP+QFY LGRPCPRICNEETR DIHSH NAK ETKCSKG
Sbjct: 1091 LATRKNLQVYIRDQPFEPSQFYLLGRPCPRICNEETRNDIHSHDNATNNAKASETKCSKG 1150
Query: 1204 HHWLHKKTISDVVEALVGAFLVDSGFKAAIAFLKWIGIQVEFEASQVTDARMASNAYLRL 1263
HHWL KKTISDVVEALVGAFLVDSGFKAAIAFLKWIGI+VEFEASQVT+A +AS AY+ L
Sbjct: 1151 HHWLQKKTISDVVEALVGAFLVDSGFKAAIAFLKWIGIKVEFEASQVTNALVASKAYVLL 1210
Query: 1264 ADCISISALQDSLGHQFLYKGLLLQALIHPSYHRHGGGCYQRLEFLGDAVLDYLITSYLY 1323
AD I+IS+LQ SLGH+FL+KGLLLQAL+HP+YH+HGGGCYQRLEFLGDAVLDYLI SYLY
Sbjct: 1211 ADTINISSLQSSLGHKFLHKGLLLQALVHPTYHKHGGGCYQRLEFLGDAVLDYLIMSYLY 1270
Query: 1324 SVYPKLKPGLVTDLRSVFVMNEAFANISVDRFFYKFLICDSTSLQKDIKSYVNFIKSPPS 1383
S YPKLKPGL+TDLRSVFV NEAFAN++VDRFFYKFL+CDS SLQ DIKSYV+FIK+PPS
Sbjct: 1271 SAYPKLKPGLLTDLRSVFVRNEAFANVAVDRFFYKFLLCDSASLQSDIKSYVDFIKAPPS 1330
Query: 1384 ERGSLEQPTCPKVLGDMVESIVGAVLVDTGFDMNYVWKIMLSFLDSIMSFSGFQLSPIRD 1443
ER SLEQP CPK LGD+VES VGAVLVDTGFDMNYVWKIMLSFLD IMS SGFQLSPIRD
Sbjct: 1331 ERDSLEQPRCPKPLGDLVESSVGAVLVDTGFDMNYVWKIMLSFLDPIMSSSGFQLSPIRD 1390
Query: 1444 ITEFCQDCGWKLQFNATKVEKYFSVKAEVKGNNFHETASAANRRKKDAEKIAANLILSKL 1503
I E CQ CGWKLQFN +K+EKY+SV+AEVKG++FH TASA NRRKKDAEKIAAN IL+KL
Sbjct: 1391 IIEVCQTCGWKLQFNPSKMEKYYSVEAEVKGDDFHATASAVNRRKKDAEKIAANSILTKL 1450
Query: 1504 KEKGFIPEVSSLEEILRSRKKMEPELIGFDETPSVSIDQADNGSGTIPGSEHSGAELDPC 1563
K +GFIPEV+SLE+IL+S +KM+P+LIG+DETPSV++D+ D+ G E SGA+LDP
Sbjct: 1451 KAQGFIPEVNSLEKILKSSEKMKPKLIGYDETPSVTMDRIDD------GLEFSGADLDPR 1510
Query: 1564 VNSEFSNSHSVRITRLSEAPEFSSVAAEEELKPST-----FGGTNLQ----------SSS 1623
V+ E +S RITR+SE SS AA E+LKPS T+LQ SSS
Sbjct: 1511 VHREVGDSRPFRITRMSETLASSSGAAGEQLKPSIPLEGHDSSTDLQSLSSSSSSSSSSS 1570
Query: 1624 GRSSKTTARSRLYEICAANHWNQPSFDCMNEEGPGHLKMFTYKVVLEIEEAPDTIFEFFG 1683
GRS KTTARSRLYE+CA NHWN PSFDCMNEEGP HLKMFTYKVVLEIEEAP+TIFEFFG
Sbjct: 1571 GRSGKTTARSRLYEVCAINHWNHPSFDCMNEEGPSHLKMFTYKVVLEIEEAPNTIFEFFG 1630
Query: 1684 ASHSRKKAAAEHAAEAALWYLKKEGYWNETD 1696
A H KKAAAEHAAEAALWYLKKE Y +TD
Sbjct: 1631 APHLTKKAAAEHAAEAALWYLKKERYLGDTD 1654
BLAST of Sed0002244 vs. NCBI nr
Match:
XP_023515971.1 (dicer-like protein 4 isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 2650.5 bits (6869), Expect = 0.0e+00
Identity = 1359/1651 (82.31%), Postives = 1459/1651 (88.37%), Query Frame = 0
Query: 64 SDFIDNSKPSSLAVEKLMGLSLVGDPGAGSSSRASEKDPRRVARKYQLELCKKALEENII 123
+D ++ SS +VE+ MGLS V D GAGSS R S KDPRR+ARKYQLELC+KALEENII
Sbjct: 11 ADSVNFQPTSSASVERFMGLSPVDDQGAGSSIRTSGKDPRRIARKYQLELCEKALEENII 70
Query: 124 VYLGTGCGKTHIAILLIYEMRNLIRRSQKGICVFLAPTVALVQQQAKVIEDSIDFKVRVY 183
VYLGTGCGKTHIAILLIYEM +LIRR QKGICVFLAPTVALVQQQAKVIEDSIDFKV+VY
Sbjct: 71 VYLGTGCGKTHIAILLIYEMGHLIRRPQKGICVFLAPTVALVQQQAKVIEDSIDFKVKVY 130
Query: 184 CGGFKGLNSHYDWEREMEEHEVFVMTPQTLLRSLNHCYIKMEFVELLIFDECHHAQVKSD 243
CGG K LNSHYDWEREMEE+EVFVMTP+ LLR+L+HCYIKMEFVELLIFDECHHAQVKSD
Sbjct: 131 CGGSKCLNSHYDWEREMEEYEVFVMTPEILLRNLHHCYIKMEFVELLIFDECHHAQVKSD 190
Query: 244 HSYAQIMKVFYKGSVAKRPRIFGMTASPVVGKGTCNQQSLSKSINSLEKLLDAKVYSVED 303
HSYA+IM+VFYK + KRPRIFGMTASPVVGKG CNQQ+LSKSINSLEKLLDAKVYSVED
Sbjct: 191 HSYAEIMRVFYKANEHKRPRIFGMTASPVVGKGACNQQNLSKSINSLEKLLDAKVYSVED 250
Query: 304 REDLEAFVSSPLVKIYYYGPVANGSSSSFMTYCCQLEEVKRQCVVALGQMKGEHEGLLAT 363
RE+LEAFVSSP KIYYYGPVA GSSSSFMTYCC LE+VK QC+VALGQMKGEHEGLLAT
Sbjct: 251 REELEAFVSSPRFKIYYYGPVATGSSSSFMTYCCPLEDVKCQCIVALGQMKGEHEGLLAT 310
Query: 364 KKLLLRMHDNIIFCLENLGVWGALQASKILLSGDNSERSELIEAAEGNPNNDSLSDRYLN 423
KKLL RMH NIIFCLENLGVWGALQASKILLS DNSERSELIEAAE NP +DS+SDRYLN
Sbjct: 311 KKLLCRMHKNIIFCLENLGVWGALQASKILLSEDNSERSELIEAAEANPKHDSISDRYLN 370
Query: 424 QAAEILASGCKIDGGMPDMLNVDILEDPFFSKKLLRLIGILSSFGHRLNMKCIIFVNRIV 483
QAAEI ASGCKID G+ DMLNVDIL++P FSKKLLRLIGILSSF HR NMKCIIFVNRIV
Sbjct: 371 QAAEIFASGCKIDAGVSDMLNVDILKEPCFSKKLLRLIGILSSFRHRPNMKCIIFVNRIV 430
Query: 484 IARSLSYILQNLKFLAYWKCDFLVGVHSKLRSMSRKTMNRILTKFRSGELNLLIATKVGE 543
IARSLSYILQNLKFLAYWKCDFLVGVHSKLRSMSRKTMN ILTKFRSGELNLLIATKVGE
Sbjct: 431 IARSLSYILQNLKFLAYWKCDFLVGVHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGE 490
Query: 544 EGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAFIVDRGNEKERGLIDGFQKDEN 603
EGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAF+VD GNEKE GLID F KDE
Sbjct: 491 EGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAFLVDSGNEKELGLIDEFHKDEK 550
Query: 604 HMNREISSRSSNETFQSHEESIYRVVSTGASVTSGLSISLLHEYCSKLPHDEYFDPKPKF 663
MNREISSRSS ETF HEESIYRVVSTGASVTSG SISLLHEYCSKLPHD YFDPKPKF
Sbjct: 551 RMNREISSRSSIETFDGHEESIYRVVSTGASVTSGRSISLLHEYCSKLPHDTYFDPKPKF 610
Query: 664 FYYDDLEGTICHAILPSNAPIPQVVSRVQFSRDAAKKDACLKAIEELHKLGAFNDFLLPM 723
FY DDL GTICHAILPSNAPIPQ+VSR Q + AAKKDACLKA+EELHKLGA +D+LLPM
Sbjct: 611 FYCDDLGGTICHAILPSNAPIPQIVSRPQPAGVAAKKDACLKAVEELHKLGALSDYLLPM 670
Query: 724 RDNAIEEELELASCDSDSSEDETSRRELHEMLVPTALKDSWTGSGNVILNCYQIKISPHP 783
RDNA E ELEL S DSDSSEDETSRRELHEM+ P A K+SWTG G VIL CY IK +P+P
Sbjct: 671 RDNANEGELELDS-DSDSSEDETSRRELHEMISPAAFKESWTGFGYVILYCYHIKFTPNP 730
Query: 784 GDRIYKEFGLFVKAPLPQEAERIDLELHLARSRYVKVNLVPSGVVELLEDEITQAESFQE 843
DRIYKEFGLFVKAPLPQEA R+DLELHLA R VKVNL+PS VVELLE+EITQAE FQE
Sbjct: 731 EDRIYKEFGLFVKAPLPQEAVRMDLELHLAHGRSVKVNLMPSRVVELLENEITQAECFQE 790
Query: 844 MFLKVILDRSEFVQDYVPLRNNVSGSISSASYLLLPMIFQDNEGSSLIDWKVIRRCLSSQ 903
MFLKVILDRSEFV DY+PLRNNVS SISS SYLLLP+I DNEGS IDWKVIRRCLSSQ
Sbjct: 791 MFLKVILDRSEFVHDYIPLRNNVSRSISSTSYLLLPVIVHDNEGSVFIDWKVIRRCLSSQ 850
Query: 904 IFQNHACSAVRETASSDTHLTLYDGRRRLCDIENSLVYVPYKREFFFVTHIVRSKNGYSR 963
IFQNHACS V+ETASSDTHL LYDGRRR DIENSLVYVPYKREFFFVT+IVR KNGYS+
Sbjct: 851 IFQNHACSIVKETASSDTHLMLYDGRRRSSDIENSLVYVPYKREFFFVTNIVRRKNGYSQ 910
Query: 964 YKNSGSLSHFEHLLERFDIHLKYPEQPLLCAKPLFHLHNLLHDRRLNDSEACDLIEHLID 1023
YK+SGSLSHFEHL RF IHLKYPEQPLLCAKPLF LHNLLH+R+ DS A L E+ ID
Sbjct: 911 YKDSGSLSHFEHLKTRFGIHLKYPEQPLLCAKPLFSLHNLLHNRKQKDS-APYLEEYFID 970
Query: 1024 LPPELCQLKITGFTKDIGSSISLLPSFMHHLENFLVAIELKCTLAAAFPAASEVTSNRIL 1083
+ PELCQLKITGF+KDIGSSISLLPS MH LEN LVAIELKC LAAAFPA +EVT+NRIL
Sbjct: 971 IAPELCQLKITGFSKDIGSSISLLPSIMHRLENLLVAIELKCMLAAAFPAGAEVTANRIL 1030
Query: 1084 EALTTEKCQERISLERLEILGDAFLKFAVARHLFLTHDKFDEGELTRRRSYLVKNINLFK 1143
EALTTEKCQERISLERLEILGD+FLKFAVAR+LFL HDKFDEGELTRRRSYLVKNINLFK
Sbjct: 1031 EALTTEKCQERISLERLEILGDSFLKFAVARYLFLAHDKFDEGELTRRRSYLVKNINLFK 1090
Query: 1144 LATRKNLQVYIRDQPFEPNQFYSLGRPCPRICNEETRKDIHSH----KNAKGGETKCSKG 1203
LATRKNLQVYIRDQPFEP+QFY LGRPCPRICNEETR DIHSH NAK ETKCSKG
Sbjct: 1091 LATRKNLQVYIRDQPFEPSQFYLLGRPCPRICNEETRNDIHSHDNATNNAKASETKCSKG 1150
Query: 1204 HHWLHKKTISDVVEALVGAFLVDSGFKAAIAFLKWIGIQVEFEASQVTDARMASNAYLRL 1263
HHWL KKTISDVVEALVGAFLVDSGFKAAIAFLKWIGI+VEFEASQVT+A +AS AY+ L
Sbjct: 1151 HHWLQKKTISDVVEALVGAFLVDSGFKAAIAFLKWIGIKVEFEASQVTNALVASKAYVLL 1210
Query: 1264 ADCISISALQDSLGHQFLYKGLLLQALIHPSYHRHGGGCYQRLEFLGDAVLDYLITSYLY 1323
AD I+IS+LQ SLGH+FL+KGLLLQAL+HP+YH+HGGGCYQRLEFLGDAVLDYLI SYLY
Sbjct: 1211 ADTINISSLQSSLGHKFLHKGLLLQALVHPTYHKHGGGCYQRLEFLGDAVLDYLIMSYLY 1270
Query: 1324 SVYPKLKPGLVTDLRSVFVMNEAFANISVDRFFYKFLICDSTSLQKDIKSYVNFIKSPPS 1383
S YPKLKPGL+TDLRSVFV NEAFAN++VDRFFYKFL+CDS SLQ DIKSYV+FIK+PPS
Sbjct: 1271 SAYPKLKPGLLTDLRSVFVRNEAFANVAVDRFFYKFLLCDSASLQSDIKSYVDFIKAPPS 1330
Query: 1384 ERGSLEQPTCPKVLGDMVESIVGAVLVDTGFDMNYVWKIMLSFLDSIMSFSGFQLSPIRD 1443
ER SLEQP CPK LGD+VES VGAVLVDTGFDMNYVWKIMLSFLD IMS SGFQLSPIRD
Sbjct: 1331 ERDSLEQPRCPKPLGDLVESSVGAVLVDTGFDMNYVWKIMLSFLDPIMSSSGFQLSPIRD 1390
Query: 1444 ITEFCQDCGWKLQFNATKVEKYFSVKAEVKGNNFHETASAANRRKKDAEKIAANLILSKL 1503
I E CQ CGWKLQFN +K+EKY+SV+AEVKG++FH TASA NRRKKDAEKIAAN IL+KL
Sbjct: 1391 IIEVCQTCGWKLQFNPSKMEKYYSVEAEVKGDDFHATASAVNRRKKDAEKIAANSILTKL 1450
Query: 1504 KEKGFIPEVSSLEEILRSRKKMEPELIGFDETPSVSIDQADNGSGTIPGSEHSGAELDPC 1563
K +GFIPEV+SLE+IL+S +KM+P+LIG+DETPSV++D+ D+ G E SGA+LDP
Sbjct: 1451 KAQGFIPEVNSLEKILKSSEKMKPKLIGYDETPSVTMDRIDD------GLEFSGADLDPR 1510
Query: 1564 VNSEFSNSHSVRITRLSEAPEFSSVAAEEELKPST-----FGGTNLQ----------SSS 1623
V+ E +S RITR+SE SS AA E+LKPS T+LQ SSS
Sbjct: 1511 VHREVGDSRPFRITRMSETLASSSGAAGEQLKPSIPLEGHDSSTDLQSLSSSSSSSSSSS 1570
Query: 1624 GRSSKTTARSRLYEICAANHWNQPSFDCMNEEGPGHLKMFTYKVVLEIEEAPDTIFEFFG 1683
GRS KTTARSRLYE+CA NHWN PSFDCMNEEGP HLKMFTYKVVLEIEEAP+TIFEFFG
Sbjct: 1571 GRSGKTTARSRLYEVCAINHWNHPSFDCMNEEGPSHLKMFTYKVVLEIEEAPNTIFEFFG 1630
Query: 1684 ASHSRKKAAAEHAAEAALWYLKKEGYWNETD 1696
A H KKAAAEHAAEAALWYLKKE Y +TD
Sbjct: 1631 APHLTKKAAAEHAAEAALWYLKKERYLGDTD 1653
BLAST of Sed0002244 vs. ExPASy Swiss-Prot
Match:
P84634 (Dicer-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=DCL4 PE=1 SV=2)
HSP 1 Score: 1640.6 bits (4247), Expect = 0.0e+00
Identity = 863/1620 (53.27%), Postives = 1126/1620 (69.51%), Query Frame = 0
Query: 84 SLVGDPGAGSSSRASEKDPRRVARKYQLELCKKALEENIIVYLGTGCGKTHIAILLIYEM 143
SL G S EKDPR++AR+YQ+ELCKKA EEN+IVYLGTGCGKTHIA++LIYE+
Sbjct: 102 SLFSAAGTDDPSPKMEKDPRKIARRYQVELCKKATEENVIVYLGTGCGKTHIAVMLIYEL 161
Query: 144 RNLIRRSQKGICVFLAPTVALVQQQAKVIEDSIDFKVRVYCGGFKGLNSHYDWEREMEEH 203
+L+ +K +C+FLAPTVALV+QQAKVI DS++FKV ++CGG + + SH +WERE+ +
Sbjct: 162 GHLVLSPKKSVCIFLAPTVALVEQQAKVIADSVNFKVAIHCGGKRIVKSHSEWEREIAAN 221
Query: 204 EVFVMTPQTLLRSLNHCYIKMEFVELLIFDECHHAQVKSDHSYAQIMKVFYKGSVAKRPR 263
EV VMTPQ LL +L HC+IKME + LLIFDECHHAQ +S+H YA+IMKVFYK +RPR
Sbjct: 222 EVLVMTPQILLHNLQHCFIKMECISLLIFDECHHAQQQSNHPYAEIMKVFYKSESLQRPR 281
Query: 264 IFGMTASPVVGKGTCNQQSLSKSINSLEKLLDAKVYSVEDREDLEAFVSSPLVKIYYYGP 323
IFGMTASPVVGKG+ ++LSKSINSLE LL+AKVYSVE L+ FVSSPLVK+YYY
Sbjct: 282 IFGMTASPVVGKGSFQSENLSKSINSLENLLNAKVYSVESNVQLDGFVSSPLVKVYYYRS 341
Query: 324 VANGSSSSFMTYCCQLEEVKRQCVVALGQMKGEH--EGLLATKKLLLRMHDNIIFCLENL 383
+ +S S + Y LE++K++C+ +L + H + LL+ K+LL R HDN+I+ L NL
Sbjct: 342 ALSDASQSTIRYENMLEDIKQRCLASLKLLIDTHQTQTLLSMKRLLKRSHDNLIYTLLNL 401
Query: 384 GVWGALQASKILLSGDNSERSELIEAAEGNPNNDSLSDRYLNQAAEILASGCKIDGGMPD 443
G+WGA+QA+KI L+ D++ + E + G + D YL+ AAE L+SG D D
Sbjct: 402 GLWGAIQAAKIQLNSDHNVQDEPV----GKNPKSKICDTYLSMAAEALSSGVAKDENASD 461
Query: 444 MLNVDILEDPFFSKKLLRLIGILSSFGHRLNMKCIIFVNRIVIARSLSYILQNLKFLAYW 503
+L++ L++P FS+KL++LI ILS F +MKCIIFVNRIV AR+LS IL NL+ L W
Sbjct: 462 LLSLAALKEPLFSRKLVQLIKILSVFRLEPHMKCIIFVNRIVTARTLSCILNNLELLRSW 521
Query: 504 KCDFLVGVHSKLRSMSRKTMNRILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPE 563
K DFLVG+ S L+SMSR++M IL +F+S ELNLL+ATKVGEEGLDIQTCCLVIR+DLPE
Sbjct: 522 KSDFLVGLSSGLKSMSRRSMETILKRFQSKELNLLVATKVGEEGLDIQTCCLVIRYDLPE 581
Query: 564 TVSSFIQSRGRARMPQSEYAFIVDRGNEKERGLIDGFQKDENHMNREISSRSSNETFQSH 623
TV+SFIQSRGRARMPQSEYAF+VD GNEKE LI+ F+ +E+ MN EI+ RSS ET
Sbjct: 582 TVTSFIQSRGRARMPQSEYAFLVDSGNEKEMDLIENFKVNEDRMNLEITYRSSEETCPRL 641
Query: 624 EESIYRVVSTGASVTSGLSISLLHEYCSKLPHDEYFDPKPKFFY--YDDLEGTICHAILP 683
+E +Y+V TGA ++ G SISLL++YCS+LPHDE+F PKP+F + D+ GTIC LP
Sbjct: 642 DEELYKVHETGACISGGSSISLLYKYCSRLPHDEFFQPKPEFQFKPVDEFGGTICRITLP 701
Query: 684 SNAPIPQVVSRVQFSRDAAKKDACLKAIEELHKLGAFNDFLLPMRDNAIEEELELASCDS 743
+NAPI ++ S + S +AAKKDACLKA+ ELH LG NDFLLP + IE+EL D
Sbjct: 702 ANAPISEIESSLLPSTEAAKKDACLKAVHELHNLGVLNDFLLPDSKDEIEDELSDDEFDF 761
Query: 744 DSSEDE-TSRRELHEMLVPTALKDSWTGSGNVI-LNCYQIKISPHPGDRIYKEFGLFVKA 803
D+ + E SR +L+EM VP K W S + + L+ Y I PHP DRIYK+FG F+K+
Sbjct: 762 DNIKGEGCSRGDLYEMRVPVLFKQKWDPSTSCVNLHSYYIMFVPHPADRIYKKFGFFMKS 821
Query: 804 PLPQEAERIDLELHLARSRYVKVNLVPSGVVELLEDEITQAESFQEMFLKVILDRSEFVQ 863
PLP EAE +D++LHLA R V V + PSGV E DEI AE FQE+ LKV+ +R E +
Sbjct: 822 PLPVEAETMDIDLHLAHQRSVSVKIFPSGVTEFDNDEIRLAELFQEIALKVLFERGELIP 881
Query: 864 DYVPLR-NNVSGSISSASYLLLPMIFQDNEGSSLIDWKVIRRCLSSQIFQNHACSAVRET 923
D+VPL + S + S YLLLP+ D E +DW IR CLSS IF+ +
Sbjct: 882 DFVPLELQDSSRTSKSTFYLLLPLCLHDGESVISVDWVTIRNCLSSPIFKTPSVLVEDIF 941
Query: 924 ASSDTHLTLYDGRRRLCDIENSLVYVPYKREFFFVTHIVRSKNGYSRYKNSGSLSHFEHL 983
S +HL L +G + D++NSLV+ Y ++F+FV I +NG+S K S + SH E +
Sbjct: 942 PPSGSHLKLANGCWNIDDVKNSLVFTTYSKQFYFVADICHGRNGFSPVKESSTKSHVESI 1001
Query: 984 LERFDIHLKYPEQPLLCAKPLFHLHNLLHDRRLNDSEACDLIEHLIDLPPELCQLKITGF 1043
+ + + LK+P QPLL KPL H+ NLLH+R + E +L E+ I++PPEL LKI G
Sbjct: 1002 YKLYGVELKHPAQPLLRVKPLCHVRNLLHNRMQTNLEPQELDEYFIEIPPELSHLKIKGL 1061
Query: 1044 TKDIGSSISLLPSFMHHLENFLVAIELKCTLAAAFPAASEVTSNRILEALTTEKCQERIS 1103
+KDIGSS+SLLPS MH +EN LVAIELK L+A+ P +EV+ +R+LEALTTEKC ER+S
Sbjct: 1062 SKDIGSSLSLLPSIMHRMENLLVAIELKHVLSASIPEIAEVSGHRVLEALTTEKCHERLS 1121
Query: 1104 LERLEILGDAFLKFAVARHLFLTHDKFDEGELTRRRSYLVKNINLFKLATRKNLQVYIRD 1163
LERLE+LGDAFLKFAV+RHLFL HD DEGELTRRRS +V N NL +LA +KNLQVYIRD
Sbjct: 1122 LERLEVLGDAFLKFAVSRHLFLHHDSLDEGELTRRRSNVVNNSNLCRLAIKKNLQVYIRD 1181
Query: 1164 QPFEPNQFYSLGRPCPRICNEETRKDIHSHKNAKG------GETKCSKGHHWLHKKTISD 1223
Q +P QF++ G PC C+E K++HS G GE +CSKGHHWL+KKTI+D
Sbjct: 1182 QALDPTQFFAFGHPCRVTCDEVASKEVHSLNRDLGILESNTGEIRCSKGHHWLYKKTIAD 1241
Query: 1224 VVEALVGAFLVDSGFKAAIAFLKWIGIQVEFEASQVTDARMASNAYLRLADCISISALQD 1283
VVEALVGAFLVDSGFK A+ FLKWIG+ V+FE+ QV DA +AS YL L ++ L++
Sbjct: 1242 VVEALVGAFLVDSGFKGAVKFLKWIGVNVDFESLQVQDACIASRRYLPLTTRNNLETLEN 1301
Query: 1284 SLGHQFLYKGLLLQALIHPSYHRHGGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGLV 1343
L ++FL+KGLL+QA IHPSY+RHGGGCYQRLEFLGDAVLDYL+TSY ++V+PKLKPG +
Sbjct: 1302 QLDYKFLHKGLLVQAFIHPSYNRHGGGCYQRLEFLGDAVLDYLMTSYFFTVFPKLKPGQL 1361
Query: 1344 TDLRSVFVMNEAFANISVDRFFYKFLICDSTSLQKDIKSYVNFIKSPPSERGSLEQPTCP 1403
TDLRS+ V NEA AN++V +FL C+S L + I+ Y NF+ S P G E P CP
Sbjct: 1362 TDLRSLSVNNEALANVAVSFSLKRFLFCESIYLHEVIEDYTNFLASSPLASGQSEGPRCP 1421
Query: 1404 KVLGDMVESIVGAVLVDTGFDMNYVWKIMLSFLDSIMSFSGFQLSPIRDITEFCQDCGWK 1463
KVLGD+VES +GA+ +D GF++N+VW +MLSFLD + + S Q+SPI+++ E CQ W
Sbjct: 1422 KVLGDLVESCLGALFLDCGFNLNHVWTMMLSFLDPVKNLSNLQISPIKELIELCQSYKWD 1481
Query: 1464 LQFNATKVEKYFSVKAEVKGNNFHETASAANRRKKDAEKIAANLILSKLKEKGFIPEVSS 1523
+ +ATK + F+V+ +V N T SA R K++ K AA L+++ LK I
Sbjct: 1482 REISATKKDGAFTVELKVTKNGCCLTVSATGRNKREGTKKAAQLMITNLKAHENITTSHP 1541
Query: 1524 LEEILRSRKKMEPELIGFDETPSVSIDQADNGSGTIPGSEHSGAELDPCVNSEFSNSHSV 1583
LE++L++ + E +LIG++E P +D + E G NSE S+S+ +
Sbjct: 1542 LEDVLKNGIRNEAKLIGYNEDPIDVVDLVGLDVENLNILETFGG------NSERSSSYVI 1601
Query: 1584 RITRLSEAPEFSSVAAEEELKPSTFGGTNLQSSSGRSSKTTARSRLYEICAANHWNQPSF 1643
R L +AP E+ L + + G SSK TA+S L+E C AN W P F
Sbjct: 1602 R-RGLPQAPS----KTEDRLPQKA-----IIKAGGPSSK-TAKSLLHETCVANCWKPPHF 1661
Query: 1644 DCMNEEGPGHLKMFTYKVVLEIEEAPDTIFEFFGASHSRKKAAAEHAAEAALWYLKKEGY 1691
+C EEGPGHLK F YKV+LE+E+AP+ E +G + + KK AAEHAA+AA+W LK G+
Sbjct: 1662 ECCEEEGPGHLKSFVYKVILEVEDAPNMTLECYGEARATKKGAAEHAAQAAIWCLKHSGF 1700
BLAST of Sed0002244 vs. ExPASy Swiss-Prot
Match:
A7LFZ6 (Endoribonuclease Dicer homolog 4 OS=Oryza sativa subsp. japonica OX=39947 GN=DCL4 PE=2 SV=1)
HSP 1 Score: 1436.4 bits (3717), Expect = 0.0e+00
Identity = 798/1664 (47.96%), Postives = 1072/1664 (64.42%), Query Frame = 0
Query: 81 MGLSLVGDPGAG----SSSRASEKDPRRVARKYQLELCKKALEENIIVYLGTGCGKTHIA 140
MG + P A SS+R KDPR +ARKYQL+LCK+A+EENIIVYLGTGCGKTHIA
Sbjct: 1 MGDAAAAAPAAAAAGPSSTRGEPKDPRTIARKYQLDLCKRAVEENIIVYLGTGCGKTHIA 60
Query: 141 ILLIYEMRNLIRRSQKGICVFLAPTVALVQQQAKVIEDSIDFKVRVYCGGFKGLNSHYDW 200
+LLIYE+ +LIR+ + +C+FLAPT+ LV+QQA VI S DFKV+ Y G K H +W
Sbjct: 61 VLLIYELGHLIRKPSREVCIFLAPTIPLVRQQAVVIASSTDFKVQCYYGNGKNSRDHQEW 120
Query: 201 EREMEEHEVFVMTPQTLLRSLNHCYIKMEFVELLIFDECHHAQVKSDHSYAQIMKVFY-K 260
E +M E EV VMTPQ LL+SL HC+IKM + LLI DECHHAQ + H YAQIMK FY
Sbjct: 121 ENDMREFEVLVMTPQILLQSLRHCFIKMNSIALLILDECHHAQPQKRHPYAQIMKEFYNS 180
Query: 261 GSVAKRPRIFGMTASPVVGKGT--------------------------CNQQSLSKSINS 320
SV K PR+FGMTASP++GKG N+ + +K INS
Sbjct: 181 NSVEKFPRVFGMTASPIIGKGVMPSHSFTEKGGRSPCQPLIFFLPKGGSNKLNYTKCINS 240
Query: 321 LEKLLDAKVYSVEDREDLEAFVSSPLVKIYYYGPVANGSSSSFMTYCC-QLEEVKRQCVV 380
LE+LL AKV SV D E+LE+ V+SP +++Y+YGPV + S+ T C +L+ +K Q
Sbjct: 241 LEELLHAKVCSV-DNEELESVVASPDMEVYFYGPV---NHSNLTTICIKELDSLKLQSER 300
Query: 381 ALGQMKGEHEGLLATKKLLLRMHDNIIFCLENLGVWGALQASKILLS--GDNSERSELIE 440
L + + K L R+H+NIIFCL+ LG +GALQA++ LS GD +R E+
Sbjct: 301 MLRASLCDFKDSQKKLKSLWRLHENIIFCLQELGSFGALQAARTFLSFDGDKLDRREV-- 360
Query: 441 AAEGNPNNDSLSDRYLNQAAEILASGCKIDGGMPDMLNVDILEDPFFSKKLLRLIGILSS 500
+ N + S + YLN A IL+ K DG +++ LE+PFFS K LI +LS
Sbjct: 361 --DLNGSTSSFAHHYLNGATSILSRN-KTDGSHAGSFDLEKLEEPFFSNKFSVLINVLSR 420
Query: 501 FGHRLNMKCIIFVNRIVIARSLSYILQNLKFLAYWKCDFLVGVHSKLRSMSRKTMNRILT 560
+G + NMKCI+FV RI +AR++S ILQNLK L +WKC+FLVG HS ++MSR M+ I+
Sbjct: 421 YGLQENMKCIVFVKRITVARAISNILQNLKCLEFWKCEFLVGCHSGSKNMSRNKMDAIVQ 480
Query: 561 KFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAFIVDR 620
+F SGE+NLL+AT VGEEGLDIQTCCLV+RFDLPETV+SFIQSRGRARM +S+Y +++R
Sbjct: 481 RFSSGEVNLLVATSVGEEGLDIQTCCLVVRFDLPETVASFIQSRGRARMTKSKYVVLLER 540
Query: 621 GNEKERGLIDGFQKDENHMNREISSRSSNETFQSHEESIYRVVSTGASVTSGLSISLLHE 680
N+ L++G+ E+ MN EI SR+SN+ F EE+IY+V +TGAS+++ S+SLLH
Sbjct: 541 ENQSHEKLLNGYIAGESIMNEEIDSRTSNDMFDCLEENIYQVDNTGASISTACSVSLLHC 600
Query: 681 YCSKLPHDEYFDPKPKFFYYDDLEGTICHAILPSNAPIPQVVSRVQFSRDAAKKDACLKA 740
YC LP D +F P P FFY D +EG IC ILP NA Q + S+D AK+DACLKA
Sbjct: 601 YCDNLPRDMFFTPSPVFFYIDGIEGIICRLILPPNAAFRQADGQPCLSKDEAKRDACLKA 660
Query: 741 IEELHKLGAFNDFLLPMRDNAIEEELELASCDSDSSEDETSRRELHEMLVPTALKDSWTG 800
+LHKLGA DFLLP + + + ++ ED++ R ELHEML+P LK S
Sbjct: 661 CVKLHKLGALTDFLLPGPGSRKNKVSVTNNSSNNKVEDDSLREELHEMLIPAVLKPSGLK 720
Query: 801 SGNVI-LNCYQIKISPHPGDRIYKEFGLFVKAPLPQEAERIDLELHLARSRYVKVNLVPS 860
++ L+ Y +K P P DR Y+ FGLFV PLP EAE + ++LHLAR R VK +
Sbjct: 721 LDSLSNLHFYYVKFIPIPEDRRYQMFGLFVINPLPVEAETLQVDLHLARGRIVKAGIKHL 780
Query: 861 GVVELLEDEITQAESFQEMFLKVILDRSEFVQDYVPLRNNVSGSISSASYLLLPMIFQDN 920
G + ++++ A FQEM LK++LDRSEF +V L N+V+ I+S YLLLP+ +
Sbjct: 781 GKIAFEKEKMMLAHKFQEMCLKILLDRSEFTSPHVKLGNDVTLEINSTFYLLLPIKQKCY 840
Query: 921 EGSSLIDWKVIRRCLSSQIFQNHACSAVRETASSDTHLTLYDGRRRLCDIENSLVYVPYK 980
+IDW + RCLSS IF++ +V + SS+ L L DG D+ S+V+ P+
Sbjct: 841 GDRFMIDWPAVERCLSSPIFKDPIDVSVHASYSSNESLRLLDGIFSKTDVVGSVVFSPHN 900
Query: 981 REFFFVTHIVRSKNGYSRYKNSGSLSHFEHLLERFDIHLKYPEQPLLCAKPLFHLHNLLH 1040
FFFV I+ N +S + + ++ EH ERF I L +PEQPLL AK +F+L NLLH
Sbjct: 901 NIFFFVDGILDEINAWSEHSGA---TYAEHFKERFRIELSHPEQPLLKAKQIFNLRNLLH 960
Query: 1041 DR--RLNDSEACDLIEHLIDLPPELCQLKITGFTKDIGSSISLLPSFMHHLENFLVAIEL 1100
+R +SE +L+EH ++LPPELC LK+ GF+KD+GSS+SLLPS M+ LEN LVAIEL
Sbjct: 961 NRLPETTESEGRELLEHFVELPPELCSLKVIGFSKDMGSSLSLLPSLMYRLENLLVAIEL 1020
Query: 1101 KCTLAAAFPAASEVTSNRILEALTTEKCQERISLERLEILGDAFLKFAVARHLFLTHDKF 1160
K + ++FP AS+++++ ILEALTTEKC ERISLER E+LGDAFLK+ V RH F+T++
Sbjct: 1021 KDVMLSSFPEASQISASGILEALTTEKCLERISLERFEVLGDAFLKYVVGRHKFITYEGL 1080
Query: 1161 DEGELTRRRSYLVKNINLFKLATRKNLQVYIRDQPFEPNQFYSLGRPCPRICNEETRKDI 1220
DEG+LTRRRS +V N +L++L+ RK LQVYIRDQ FEP QF++ GRPC +CN + +
Sbjct: 1081 DEGQLTRRRSDVVNNSHLYELSIRKKLQVYIRDQQFEPTQFFAPGRPCKVVCNTDVEVRL 1140
Query: 1221 HS----HKNAKGGETKCSKGHHWLHKKTISDVVEALVGAFLVDSGFKAAIAFLKWIGIQV 1280
H N + +C++ HHWLH+K I+DVVE+L+GAFLV+ GFKAA AFL WIGI V
Sbjct: 1141 HQMDIHPDNRENCNLRCTRSHHWLHRKVIADVVESLIGAFLVEGGFKAAFAFLHWIGIDV 1200
Query: 1281 EFEASQVTDARMASNAYLRLADCISISALQDSLGHQFLYKGLLLQALIHPSYHRHGGGCY 1340
+F + +S+ L L D I+ L++ +G++F +KGLLLQA +HPS+ +H GGCY
Sbjct: 1201 DFNNPALYRVLDSSSINLSLMDYTDIAGLEELIGYKFKHKGLLLQAFVHPSFSQHSGGCY 1260
Query: 1341 QRLEFLGDAVLDYLITSYLYSVYPKLKPGLVTDLRSVFVMNEAFANISVDRFFYKFLICD 1400
QRLEFLGDAVL+Y+ITSYLYS YP +KPG +TDLRS+ V N++ A +V++ +K LI D
Sbjct: 1261 QRLEFLGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSLAYAAVEKSIHKHLIKD 1320
Query: 1401 STSLQKDIKSYVNFIKSPPSERGSLEQPTCPKVLGDMVESIVGAVLVDTGFDMNYVWKIM 1460
S L I + ++K SE+ LE+P CPK LGD+VES +GAVL+D+GF++NYVWK+M
Sbjct: 1321 SNHLTSAISKFEMYVKLSNSEKDLLEEPACPKALGDIVESCIGAVLLDSGFNLNYVWKVM 1380
Query: 1461 LSFLDSIMSFSGFQLSPIRDITEFCQDCGWKLQF-NATKVEKYFSVKAEVKGNNFHETAS 1520
L L +++F+ +P+R++ E CQ G++L K + + VK EV + +
Sbjct: 1381 LMLLKPVLTFANMHTNPMRELRELCQCHGFELGLPKPMKADGEYHVKVEVNIKSKIIICT 1440
Query: 1521 AANRRKKDAEKIAANLILSKLKEKGFIPEVSSLEEILRSRKKMEPELIGFDETPSVSIDQ 1580
AANR K A K AA LSKLK G+ SLEEIL +K E ELIG++E P ID
Sbjct: 1441 AANRNSKAARKFAAQETLSKLKNYGYKHRNKSLEEILIVARKRESELIGYNEDP---IDV 1500
Query: 1581 ADNGSGTIPGSEHSGAELDPCVNSEFSNSHSVRITR---LSEAPEFSSVAAEEELKPSTF 1640
+ S + S H E P N+E S + S + + + K +T
Sbjct: 1501 EADISVKMK-SPHIHEENIPFQNTETSFTRSSKFHNQIIAGSGKHDVNNGRNNQPKLATQ 1560
Query: 1641 GGTNLQSSSGRSSK---------TTARSRLYEICAANHWNQPSFDCMNEEGPGHLKMFTY 1691
G ++ +S+K TARS L+E+CAAN+W P F EEGP HL+ FTY
Sbjct: 1561 SGRLPSEATEKSNKKVYHGDMVHKTARSFLFELCAANYWKPPEFKLCKEEGPSHLRKFTY 1620
BLAST of Sed0002244 vs. ExPASy Swiss-Prot
Match:
Q5N870 (Endoribonuclease Dicer homolog 3a OS=Oryza sativa subsp. japonica OX=39947 GN=DCL3A PE=2 SV=1)
HSP 1 Score: 698.7 bits (1802), Expect = 1.6e-199
Identity = 519/1669 (31.10%), Postives = 821/1669 (49.19%), Query Frame = 0
Query: 107 RKYQLELCKKALEENIIVYLGTGCGKTHIAILLIYEMRNLIRRSQKG-ICVFLAPTVALV 166
R+YQL++ + A+ N I L TG GKT IA++LI E + R G + +FLAPTV LV
Sbjct: 33 RRYQLDVYEVAMRRNTIAMLDTGAGKTMIAVMLIKEFGKINRTKNAGKVIIFLAPTVQLV 92
Query: 167 QQQAKVIEDSIDFKVRVYCGGFKGLNSHYD--WEREMEEHEVFVMTPQTLLRSLNHCYIK 226
QQ +VIE DF+V Y G KG++ W+ ++ +++V VMTPQ L++L + ++
Sbjct: 93 TQQCEVIEIHTDFEVEQYYGA-KGVDQWTGPRWQEQISKYQVMVMTPQVFLQALRNAFLI 152
Query: 227 MEFVELLIFDECHHAQVKSDHSYAQIMKVFYKGSVAKRPRIFGMTASPVVGKGTCNQQSL 286
++ V L+IFDECHHA +H Y +IMK FY S K P +FGMTASPV+ KG +
Sbjct: 153 LDMVSLMIFDECHHA--TGNHPYTRIMKEFYHKSEHK-PSVFGMTASPVIRKGISSHLDC 212
Query: 287 SKSINSLEKLLDAKVYSVEDREDLEAFVSSPLVKIYYYG--PVA-NGSSSSFMTYCCQLE 346
LE LLDAK+Y+V DRE++E V S YY PV S C + +
Sbjct: 213 EGQFCELENLLDAKIYTVSDREEIEFCVPSAKEMCRYYDSKPVCFEDLSEELGVLCSKYD 272
Query: 347 EVKRQCVVALGQMKGEHEGLL-ATKKLLLRMHDNIIFCLENLGVWGALQASKILLSGDNS 406
+ + M + + + +K+ L + I +CL+++G+ A +A+KI +
Sbjct: 273 ALITELQNKRSDMYKDADDITKESKRRLSKSIAKICYCLDDVGLICASEATKICIERGQE 332
Query: 407 E--RSELIEAAEGNPN---------NDSLSDRYLNQAAEILASGCKIDGGMPDMLN---- 466
+ E+++A + + N +L ++ +A ++ ++ G+ +LN
Sbjct: 333 KGWLKEVVDATDQQTDANGSRLFAENSALHMKFFEEALHLIDK--RLQQGIDMLLNSESG 392
Query: 467 -VDILEDPFFSKKLLRLIGILSSFGHRLNMKCIIFVNRIVIARSLSYILQNLKFLAYWKC 526
V+ + + S KL LI I SF + + +C+IFV+R + AR + +++ + LA++
Sbjct: 393 CVEAAKTGYISPKLYELIQIFHSFSNSRHARCLIFVDRKITARVIDRMIKKIGHLAHFTV 452
Query: 527 DFLVGVHSKLRSMSRKTMNRILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPETV 586
FL G S + +++ K L FRSG++NLL T V EEG+ + C VIRFDLP T
Sbjct: 453 SFLTGGRSSVDALTPKMQKDTLDSFRSGKVNLLFTTDVAEEGIHVPECSCVIRFDLPRTT 512
Query: 587 SSFIQSRGRARMPQSEYAFIVDRGNEKERGLIDGFQKDENHMNREISSRSSNET---FQS 646
S++QSRGRAR S+Y +++RGN K+ LI + E M + SSR S F
Sbjct: 513 RSYVQSRGRARQEDSQYILMIERGNVKQNDLISAIVRSETSMVKIASSRESGNLSPGFVP 572
Query: 647 HEE-SIYRVVSTGASVTSGLSISLLHEYCSKLPHDEYFDPKPKFFYYDDLEGTICHAILP 706
+EE + Y V +TGA VT+ SIS+++ YC KLP D+ + PKP F + +G +C LP
Sbjct: 573 NEEINEYHVGTTGAKVTADSSISIVYRYCEKLPQDKCYSPKPTFEFTHHDDGYVCTLALP 632
Query: 707 SNAPIPQVVSRVQFSRDAAKKDACLKAIEELHKLGAFNDFLLPMRDNAIEEELELASCDS 766
+A + +V + AK+ CL A ++LH+LGA +D L ++ + E+ S +
Sbjct: 633 PSAVLQILVGPKARNMHKAKQLVCLDACKKLHELGALDDHLCLSVEDPVP---EIVSKNK 692
Query: 767 DSSEDETSRRELHEMLVPTALKDSWTGSGNVI-LNCYQIKISPHPGDRIYKEFGLFVKAP 826
+ T R+ELH A +W + L Y++ +IY EF L + A
Sbjct: 693 GTGIGTTKRKELHGTTRIHAWSGNWVSKKTALKLQSYKMNFVCDQAGQIYSEFVLLIDAT 752
Query: 827 LPQEAERIDLELHLARSRYVKVNLVPSGVVELLEDEITQAESFQEMFLKVILDRSEFVQD 886
LP E ++++L+L + VK ++ G++EL ++ QA+ FQ + + + F +
Sbjct: 753 LPDEVATLEIDLYL-HDKMVKTSVSSCGLLELDAQQMEQAKLFQGLLFNGLFGKL-FTRS 812
Query: 887 YVP------LRNNVSGSI--SSASYLLLPMIFQDNEGSSLIDWKVIRRC-----LSSQIF 946
VP + N + +++ YLLLP + + I+W VI L +I+
Sbjct: 813 KVPNAPREFILNKEDTFVWNTASVYLLLP-TNPSFDSNVCINWSVIDAAATAVKLMRRIY 872
Query: 947 QNHACSAVRETASSDTHLTLYDGRRRLC---DIENSLVYVPYKREFFFVTHIVR-----S 1006
+ + S L + C +++ +V + + + I +
Sbjct: 873 SENKRELLGIFDSDQNVGDLIHLANKSCKANSLKDMVVLAVHTGKIYTALDITELSGDSA 932
Query: 1007 KNGYSRYKNSGSLSHFEHLLERFDIHLKYPEQPLLCAKPLFHLHNLLH----------DR 1066
+G S K + E+ +++ I L++P QPLL KP + HNLL +
Sbjct: 933 FDGASDKKECKFRTFAEYFKKKYGIVLRHPSQPLLVLKPSHNPHNLLSSKFRDEGNVVEN 992
Query: 1067 RLNDSEACDLIEHLIDLPPELCQLKITGFTKDIGSSISLLPSFMHHLENFLVAIELKCTL 1126
N + + + + +PPEL L +I S L P+ M+ +E+ +A +L+ +
Sbjct: 993 MSNGTPVVNKTSNRVHMPPEL--LIPLDLPVEILRSFYLFPALMYRIESLTLASQLRSEI 1052
Query: 1127 AAAFPAASEVTSNRILEALTTEKCQERISLERLEILGDAFLKFAVARHLFLTHDKFDEGE 1186
+ S ++S ILEA+TT +C E S+ERLE+LGD+ LK+AV+ HLFL DEG+
Sbjct: 1053 GY---SDSNISSFLILEAITTLRCSEDFSMERLELLGDSVLKYAVSCHLFLKFPNKDEGQ 1112
Query: 1187 LTRRRSYLVKNINLFKLATRKNLQVYIRDQPFEPNQFYSLG----RPCPRIC---NEETR 1246
L+ R +++ N L+KL +N+Q Y+RD F+P ++ + G RP P C +E
Sbjct: 1113 LSSIRCHMICNATLYKLGIERNVQGYVRDAAFDPRRWLAPGQLSIRPSPCECPVKSEVVT 1172
Query: 1247 KDIH--SHKNAKGGETKCSKGHHWLHKKTISDVVEALVGAFLVDSGFKAAIAFLKWIGIQ 1306
DIH K G+ C KGH W+ KTI+D VEA++GA+ G +AA+A LKW+GI
Sbjct: 1173 DDIHIIDDKAIVLGKA-CDKGHRWMCSKTIADCVEAIIGAYYAGGGLRAAMAVLKWLGIG 1232
Query: 1307 VEFEASQVTDARMASNAYLRLADCISISALQDSLGHQFLYKGLLLQALIHPSYHRHGGG- 1366
E E + A ++++ L L+ LG+ F KGLL++AL HPS G
Sbjct: 1233 AEIEEDLIVQAILSASVQTYLPKDNVFEMLEAKLGYSFSVKGLLVEALTHPSQQELGAKY 1292
Query: 1367 CYQRLEFLGDAVLDYLITSYLYSVYPKLKPGLVTDLRSVFVMNEAFANISVDRFFYKFLI 1426
CY+RLEFLGDAVLD L+T YL++ + G +TDLRS V NE FA ++V F+ FL
Sbjct: 1293 CYERLEFLGDAVLDILLTRYLFNSHKDTNEGELTDLRSASVNNENFAQVAVKHNFHHFLQ 1352
Query: 1427 CDSTSLQKDIKSYVNFIKSPPSERGSLEQ---PTCPKVLGDMVESIVGAVLVDTGFDMNY 1486
S L I YVN ++ ++ L P PKVLGD+VESI GA+L+DT D++
Sbjct: 1353 HSSGLLLDQITEYVNRLEGSSMDKVELLSDGLPKGPKVLGDIVESIAGAILLDTKLDLDV 1412
Query: 1487 VWKIMLSFLDSIMSFSGFQLSPIRDITEFCQDCGWKLQFNATKVEKYFSVKAEVKGNNFH 1546
VW I L I++ +L P R++ E+C G+ + N +V+
Sbjct: 1413 VWGIFEPLLSPIVTPENLELPPYRELIEWCGKHGYFVGINCRDQGDTVVATLDVQLKEVL 1472
Query: 1547 ETASAANRRKKDAEKIAANLILSKLKEKGFIPEVSSLEEILRSRKKMEPELIGFDETPSV 1606
++++KDA+ A++L+L L+EKG I
Sbjct: 1473 LVRQGFSKKRKDAKAHASSLLLKDLEEKGLI----------------------------- 1532
Query: 1607 SIDQADNGSGTIPGSEHSGAELDPCVNSEFSNSHSVRITRLSEAPEFSSVAAEEELKPST 1666
N S T +H G+ + F+N H + + P AA+
Sbjct: 1533 ---IPKNASKTEQFEKHCGS------TNPFNNLHVDAMDTQTPKPTKEKNAADSRNISDP 1592
Query: 1667 FGGTNLQSSSGRSSKTTARSRLYEICAANHWN---------QPSFD--CMNEEGPGHL-- 1690
G L ++SK R LYE+C W QPSF C + G
Sbjct: 1593 LLGKPLHVIV-KTSKGGPRIALYELCKKLQWPMPTMESEKVQPSFSSVCSSPGGSSQKAT 1644
BLAST of Sed0002244 vs. ExPASy Swiss-Prot
Match:
Q3EBC8 (Endoribonuclease Dicer homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At3g03300 PE=1 SV=2)
HSP 1 Score: 664.1 bits (1712), Expect = 4.3e-189
Identity = 469/1430 (32.80%), Postives = 759/1430 (53.08%), Query Frame = 0
Query: 102 PRRVARKYQLELCKKALEENIIVYLGTGCGKTHIAILLIYEMRNLIRRSQKGICVFLAPT 161
P AR YQ+E +KA+++N IV+L TG GKT IAI+L+ L R+ CVFL P
Sbjct: 20 PLHFARSYQVEALEKAIKQNTIVFLETGSGKTLIAIMLLRSYAYLFRKPSPCFCVFLVPQ 79
Query: 162 VALVQQQAKVIEDSIDFKVRVYCGGFKGLN--SHYDWEREMEEHEVFVMTPQTLLRSLNH 221
V LV QQA+ ++ D KV +Y G G++ W++E++++EV VMTP LL +L H
Sbjct: 80 VVLVTQQAEALKMHTDLKVGMYWGDM-GVDFWDSSTWKQEVDKYEVLVMTPAILLDALRH 139
Query: 222 CYIKMEFVELLIFDECHHAQVKSDHSYAQIMKVFY----KGSVAKRPRIFGMTASPVVGK 281
++ + +++LI DECHHA K H YA IM+ FY + PRIFGMTAS V K
Sbjct: 140 SFLSLSMIKVLIVDECHHAGGK--HPYACIMREFYHKELNSGTSNVPRIFGMTASLVKTK 199
Query: 282 GTCNQQSLSKSINSLEKLLDAKVYSVEDREDLEAFV--SSPLVKIYYYGPVANGSSSSFM 341
G N S K I+ LE L+++KVY+ E+ L FV S+P K Y + + + +S +
Sbjct: 200 GE-NLDSYWKKIHELETLMNSKVYTCENESVLAGFVPFSTPSFKYYQHIKIPSPKRASLV 259
Query: 342 TYCCQLEEVKRQCVVALGQMKGEHEGLLATKKLLLRMHDNIIFCLENLGVWGALQASKIL 401
+LE + + ++LG + + + +K LLR+ + +CL++LG+ A +A++ L
Sbjct: 260 E---KLERLTIKHRLSLGTLDLNSSTVDSVEKRLLRISSTLTYCLDDLGILLAQKAAQSL 319
Query: 402 LSGDNSERSELIEAAEGNPNNDSLSDRYLNQAA-EILASGCKIDGGMPDMLNVDI----- 461
+ N + E N + +L ++ + A+ E LA +P LN +
Sbjct: 320 SASQN----DSFLWGELNMFSVALVKKFCSDASQEFLAE-------IPQGLNWSVANING 379
Query: 462 -LEDPFFSKKLLRLIGILSSFGHRLNMKCIIFVNRIVIARSL-SYILQNLKFLAYWKCDF 521
E + K + LI L + N++CIIFV+R++ A L S + + L WK +
Sbjct: 380 NAEAGLLTLKTVCLIETLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKTKY 439
Query: 522 LVGVHSKLRSMSRKTMNRILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPETVSS 581
+ G +S L++ +RK N I+ FR G +N+++AT + EEGLD+Q+C LVIRFD + S
Sbjct: 440 VAGNNSGLQNQTRKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICS 499
Query: 582 FIQSRGRARMPQSEYAFIVDRGNEKERGLIDGFQKDENHMNREISSRS---SNETFQSHE 641
FIQSRGRARM S+Y +V+ G+ + + + M E S +
Sbjct: 500 FIQSRGRARMQNSDYLMMVESGDLLTQSRLMKYLSGGKRMREESLDHSLVPCPPLPDDSD 559
Query: 642 ESIYRVVSTGASVTSGLSISLLHEYCSKLPHDEYFDPKPKFFYYDDLEGTICHAILPSNA 701
E ++RV STGA+VT S+SL++ YCS+LP DEYF P P+F D +G+ C LP +
Sbjct: 560 EPLFRVESTGATVTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKD-QGS-CTLYLPKSC 619
Query: 702 PIPQVVSRVQFSRDAAKKDACLKAIEELHKLGAFNDFLLPMRDNAIEEELELASCDSDSS 761
P+ +V + + + K+ CLKA +LHK+GA +D L+P ++ +A S
Sbjct: 620 PVKEV--KAEANNKVLKQAVCLKACIQLHKVGALSDHLVP--------DMVVAETVSQKL 679
Query: 762 EDETSRRELHEMLVPTALKDSWTGSGNVILNCYQIKISPH-PGDRIYKEFGLFVKAPLPQ 821
E E P L ++ + Y I++ P+ P + + L + L
Sbjct: 680 EKIQYNTE-QPCYFPPELVSQFSAQPETTYHFYLIRMKPNSPRNFHLNDVLLGTRVVLED 739
Query: 822 EAERIDLELHLARSRYVKVNLVPSGVVELLEDEITQAESFQEMFLKVILDRSEFVQDYVP 881
+ L R + V L G L ++E+ FQ +V+LD S V++ +
Sbjct: 740 DIGNTSFRLEDHRGT-IAVTLSYVGAFHLTQEEVLFCRRFQITLFRVLLDHS--VENLME 799
Query: 882 LRNNVSGSISSA-SYLLLPMIFQDNEGSSLIDWKVIR--RCLSSQIFQNHA-CSAVRETA 941
N + A YLL+P + +SLIDW+VIR S ++ + H CS T
Sbjct: 800 ALNGLHLRDGVALDYLLVPS--THSHETSLIDWEVIRSVNLTSHEVLEKHENCS----TN 859
Query: 942 SSDTHLTLYDGRRRLCDIENSLVYVPYKREFFFVTHIVRSKNGYS--RYKNSGSLSHFEH 1001
+ L DG C ++N+LVY P+ + ++ + NG S +NSG ++ E+
Sbjct: 860 GASRILHTKDGLFCTCVVQNALVYTPHNGYVYCTKGVLNNLNGNSLLTKRNSGDQTYIEY 919
Query: 1002 LLERFDIHLKYPEQPLLCAKPLFHLHNLLHDRRLNDSEACDLIEHLIDLPPELCQLKITG 1061
ER I L + ++PLL + +F LH+ LH + + D ++LPPELC + ++
Sbjct: 920 YEERHGIQLNFVDEPLLNGRHIFTLHSYLHMAKKKKEKEHD--REFVELPPELCHVILSP 979
Query: 1062 FTKDIGSSISLLPSFMHHLENFLVAIELKCTLAAAFPAASEVTSNRILEALTTEKCQERI 1121
+ D+ S + +PS M +E+ L+A LK ++ + + ++LEA+TT+KC+++
Sbjct: 980 ISVDMIYSYTFIPSVMQRIESLLIAYNLKKSIPKV-----NIPTIKVLEAITTKKCEDQF 1039
Query: 1122 SLERLEILGDAFLKFAVARHLFLTHDKFDEGELTRRRSYLVKNINLFKLATRKNLQVYIR 1181
LE LE LGD+FLK+AV + LF EG L+ ++ ++ N+ L + ++ LQ +IR
Sbjct: 1040 HLESLETLGDSFLKYAVCQQLFQHCHTHHEGLLSTKKDGMISNVMLCQFGCQQKLQGFIR 1099
Query: 1182 DQPFEPNQFYSLGRPCP--RICNEETRKDIHSHKNAKGGETKCSKGHHWLHKKTISDVVE 1241
D+ FEP + G+ + N+ + + + ++ L +K+++DVVE
Sbjct: 1100 DECFEPKGWMVPGQSSAAYSLVNDTLPESRNIYVASRRN----------LKRKSVADVVE 1159
Query: 1242 ALVGAFLVDSGFKAAIAFLKWIGIQVEFEASQVTDARMASNAYLRLADCISISALQDSLG 1301
+L+GA+L + G AA+ F+ W+GI+V+F T ++ ++ ++ +++ ++ L
Sbjct: 1160 SLIGAYLSEGGELAALMFMNWVGIKVDF-----TTTKIQRDSPIQAEKLVNVGYMESLLN 1219
Query: 1302 HQFLYKGLLLQALIHPSYHR-HGGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGLVTD 1361
+ F K LL++AL H SY CYQRLEFLGD+VLDYLIT +LY YP L PGL+TD
Sbjct: 1220 YSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLGDSVLDYLITKHLYDKYPCLSPGLLTD 1279
Query: 1362 LRSVFVMNEAFANISVDRFFYKFLICDSTSLQKDIKSYVNFIK--SPPSERGSLEQPTCP 1421
+RS V NE +A ++V +K ++ S L K I V+ + S S G + P
Sbjct: 1280 MRSASVNNECYALVAVKANLHKHILYASHHLHKHISRTVSEFEQSSLQSTFGWESDISFP 1339
Query: 1422 KVLGDMVESIVGAVLVDTGFDMNYVWKIMLSFLDSIMSFSGFQLSPIRDITEFCQDCGWK 1481
KVLGD++ES+ GA+ VD+G++ V+ + L +++ +L P+R++TE CQ W+
Sbjct: 1340 KVLGDVIESLAGAIFVDSGYNKEVVFASIKPLLGCMITPETVKLHPVRELTELCQK--WQ 1383
Query: 1482 LQFNATKVEKYFSVKAEVKGNNFHETASAANRRKKDAEKIAANLILSKLK 1501
+ + K F+V+ + K +F TA A++ KK A+K+A +L+ LK
Sbjct: 1400 FELSKAKDFDSFTVEVKAKEMSFAHTAKASD--KKMAKKLAYKEVLNLLK 1383
BLAST of Sed0002244 vs. ExPASy Swiss-Prot
Match:
Q7XD96 (Endoribonuclease Dicer homolog 3b OS=Oryza sativa subsp. japonica OX=39947 GN=DCL3B PE=3 SV=2)
HSP 1 Score: 632.9 bits (1631), Expect = 1.1e-179
Identity = 506/1653 (30.61%), Postives = 791/1653 (47.85%), Query Frame = 0
Query: 111 LELCKKALEENIIVYLGTGCGKTHIAILLIYEMRNLIRRSQ--KGICVFLAPTVALVQQQ 170
+E+ + AL N I L TG GKT +A++L E +R + + I VFLAPTV LV QQ
Sbjct: 44 VEVFEAALRGNTIAVLDTGSGKTMVAVMLAREHARRVRAGEAPRRIVVFLAPTVHLVHQQ 103
Query: 171 AKVIEDSIDFKVRVYCGGFK-GLNSHYDWEREMEEHEVFVMTPQTLLRSLNHCYIKMEFV 230
+VI + D V + G + G W+ E+ +E+ VMTPQ LL +L H ++ M V
Sbjct: 104 FEVIREYTDLDVMMCSGASRVGEWGADHWKEEVGRNEIVVMTPQILLDALRHAFLTMSAV 163
Query: 231 ELLIFDECHHAQVKSDHSYAQIMKVFYKGSVAKRPRIFGMTASPVVGKGTCNQQSLSKSI 290
LLIFDECH A H YA+IMK FY GS RP +FGMTASPV KG + I
Sbjct: 164 SLLIFDECHRA--CGSHPYARIMKEFYFGS-QWRPDVFGMTASPVATKGASTLHNCEAHI 223
Query: 291 NSLEKLLDAKVYSVEDREDLEAF-VSSPLVKIYY--YGPVANGSSSSFMTYCCQLEEVKR 350
+ LE LDAK+Y VEDR +LE+F + +V YY Y + S + + + +
Sbjct: 224 SQLELTLDAKIYIVEDRNELESFSPPTTIVNKYYDAYMVDFDNLKSKLQIFSDEFDSLLV 283
Query: 351 QCVVALGQMKGEHEGLLAT-KKLLLRMHDNIIFCLENLGVWGALQASKILLSGDN--SER 410
+ + + +L T +K L R H I++ L +LG + KI + +
Sbjct: 284 GLQESPSNKFKDTDNILETSRKSLSRYHGKILYSLNDLGPIITSEVVKIHIESVKPLCDS 343
Query: 411 SELIEAAEGNPNNDSLSDRYLNQAAEILASG----CKIDGGMPDMLNVDILEDPFFSKKL 470
+ I + + S L+ EIL G K + G + ++ + + S K+
Sbjct: 344 EDCIFSKASLCLHMSYFKEALSLIEEILPQGYGELMKSESG-----SEELTKRGYISSKV 403
Query: 471 LRLIGILSSFGHRLNMKCIIFVNRIVIARSLSYILQNLKFLAYWKCDFLVGVHSKLRSMS 530
LI I SFG + C+IFV+RI+ A+++ ++ + + + +L G + ++S
Sbjct: 404 NTLINIFKSFGSSNEVLCLIFVDRIITAKAVERFMRGIVNFSCFSISYLTGGSTSKDALS 463
Query: 531 RKTMNRILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQ 590
L FR+G++NLL T V EEG+D+ C VIRFDLP TV S++QSRGRAR
Sbjct: 464 PAVQRFTLDLFRAGKVNLLFTTDVTEEGVDVPNCSCVIRFDLPRTVCSYVQSRGRARRNN 523
Query: 591 SEYAFIVDRGNEKE-----RGLIDGFQKDENHMNREISSRSSNETFQSHEESIYRVVSTG 650
SE+ +++RGN ++ R + G+ + R ++ S + + Q Y+V STG
Sbjct: 524 SEFILMIERGNLQQQEHIFRMIQTGYYVKNCALYRHPNALSYDLSIQG--MYTYQVQSTG 583
Query: 651 ASVTSGLSISLLHEYCSKLPHDEYFDPKPKFFYYDDLEGTICHAILPSNAPIPQVVSRVQ 710
A++T+ ++L+ +YC KLP D YF PKP F + C LP NA +V +
Sbjct: 584 ATITADCCVNLIRKYCEKLPKDRYFMPKPSFEVTIEDGLFKCTLTLPRNAAFQSIVGPLS 643
Query: 711 FSRDAAKKDACLKAIEELHKLGAFNDFLLPMRDNAIEEELELASCDSDSSEDETSRRELH 770
S + +K+ L+A ++LH+LG ND L+P+ + ++ + A S T R+ELH
Sbjct: 644 SSSNLSKQLVSLEACKKLHQLGELNDHLVPLTEEPMDTDFTTADEKCISGPGTTKRKELH 703
Query: 771 EMLVPTALKDSWT-GSGNVILNCYQIKISPHPGDRIYKEFGLFVKAPLPQEAERIDLELH 830
AL +W S N+ LN Y+I Y F L ++ L + ++L
Sbjct: 704 GTTCVLALSGTWIHDSENITLNTYRIDFLCDQEGENYAGFVLLMEPELDDDVAPSKMDLF 763
Query: 831 LARSRYVKVNLVPSGVVELLEDEITQAESFQEMFLKVILDR-------SEFVQDYVPLRN 890
L ++ V + P G V+L + ++ + + FQE F I R S +D++ +
Sbjct: 764 LIPNKMVYTTVTPRGKVQLNKKQLGKGKLFQEFFFNGIFGRLFHGSRKSGAQRDFIFKKG 823
Query: 891 NVSGSISSASYLLLPMIFQDNEGSSL-IDWKVIRRCLSS--QIFQNHA---------CSA 950
+ + + YLLLP+ L I W+ I C + Q++ ++ C
Sbjct: 824 HEIQWNTESMYLLLPLRDSSYIQDDLSIHWEAIESCAGAVEQLWSSYQGDENVIPVNCIP 883
Query: 951 VRETASSDTHLTLYDGRRRLCDIENSLVYVPYKREFFFVTHIVRSKNGYSRY------KN 1010
+ + + L + I++S+V + + V ++ + K
Sbjct: 884 QKRRGGQEEIIHLANKSLHCSSIKDSVVLSLHTGRIYTVLDLILDTTAEDSFDEMCKGKA 943
Query: 1011 SGSLSHFEHLLERFDIHLKYPEQPLLCAKPLFHLHNLLHD--RRLNDSEACDLIEHLIDL 1070
S S ++ +++ I +++PEQPLL K + HNLL + L+ S L+ +
Sbjct: 944 SPFTSFVDYYHQKYGIIIQHPEQPLLLLKQSHNAHNLLFSKLKYLDGSTGKPLLMEKEQI 1003
Query: 1071 ----PPELCQLKITGFTKDIGSSISLLPSFMHHLENFLVAIELKCTLAAAFPAASEVTSN 1130
PPEL L T DI S LLPS +H L++ ++A +L+ + +
Sbjct: 1004 HARVPPEL--LIHLDVTTDILKSFYLLPSVIHRLQSLMLASQLRREIG----YNQHIPVT 1063
Query: 1131 RILEALTTEKCQERISLERLEILGDAFLKFAVARHLFLTHDKFDEGELTRRRSYLVKNIN 1190
ILEA+TT +C E SLERLE+LGD+ LK+ V LFL + EG+L+ RS V N
Sbjct: 1064 LILEAITTLRCCETFSLERLELLGDSVLKYVVGCDLFLRYPMKHEGQLSDMRSKAVCNAT 1123
Query: 1191 LFKLATRKNLQVYIRDQPFEPNQFYSLG----RPCPRICNEET------RKDIHSHKNAK 1250
L K ++LQ Y+RD F+P ++ + G RP P C ET R+ I +
Sbjct: 1124 LHKHGIWRSLQGYVRDNAFDPRRWVAPGQISLRPFPCNCGIETAFVPSHRRYIRDDPSFF 1183
Query: 1251 GGETKCSKGHHWLHKKTISDVVEALVGAFLVDSGFKAAIAFLKWIGIQVEFEASQVTDAR 1310
G+ C +GH W+ KTISD VEALVGA+ V G AA+ ++W GI ++ + + + +
Sbjct: 1184 VGK-PCDRGHRWMCSKTISDCVEALVGAYYVGGGIAAALWVMRWFGIDIKCDMKLLQEVK 1243
Query: 1311 MASNAYLRLADCISISALQDSLGHQFLYKGLLLQALIHPSYHRHG-GGCYQRLEFLGDAV 1370
++ L+ I L+ L + F KGLLL+A+ HPS G CYQRLEFLGD+V
Sbjct: 1244 FNASHLCSLSKINDIEELEAKLKYNFSVKGLLLEAITHPSLQELGVDYCYQRLEFLGDSV 1303
Query: 1371 LDYLITSYLYSVYPKLKPGLVTDLRSVFVMNEAFANISVDRFFYKFLICDSTSLQKDIKS 1430
LD L+T +LY+ + + PG +TDLRS V NE FA V + L S L + I
Sbjct: 1304 LDLLLTRHLYATHTDVDPGELTDLRSALVSNENFAQAVVRNNIHSHLQHGSGILLEQITE 1363
Query: 1431 YV-NFIKSPPSERGSLEQPTC--PKVLGDMVESIVGAVLVDTGFDMNYVWKIMLSFLDSI 1490
YV + ++ E L+ TC PKVLGD++ESI GAV +DT F+++ VW+I L +
Sbjct: 1364 YVRSNLECQGKESEFLQHTTCKVPKVLGDIMESIAGAVFIDTDFNVDMVWEIFEPLLSPL 1423
Query: 1491 MSFSGFQLSPIRDITEFCQDCGWKLQFNATKVEKYFSVKAEVKGNNFHETASAANRRKKD 1550
++ L P R++ E C G L T + ++ ++ + A +R KK
Sbjct: 1424 ITPDKLALPPYRELLELCSHIGCFLNSKCTSKGEEVIIEMSLQLRDELLVAQGHDRNKKR 1483
Query: 1551 AEKIAANLILSKLKEKGFIPEVSSLEEILRSRKKME--PELIGFDETPSVSIDQADNGSG 1610
A+ AA+ IL+ LK++G S+++ L K+++ + FD T
Sbjct: 1484 AKAKAASRILADLKQQGL-----SIKQCLSKAKQLDIVTSDLQFDLT------------- 1543
Query: 1611 TIPGSEHSGAELDPCVNSEFSNSHSVRITRLSEAPEFSSVAAEEELKPSTFGGTNLQSSS 1670
SG +L S+ ++ H + E S +E + P
Sbjct: 1544 ------SSGTQLS---YSDLNDYHIL---------EGLSSVKKEVVLPL----------- 1603
Query: 1671 GRSSKTTARSRLYEICAANHWNQPSFD----------CMNEEGPGHLKMFTYKVVLEIEE 1688
+ K RS L+++C W P F+ M+ + F + L I +
Sbjct: 1604 -KMEKGGPRSALFKLCKILQWPMPEFEFVEQRFRTPIVMDGATTTNFNSFVSTITLHIPD 1629
BLAST of Sed0002244 vs. ExPASy TrEMBL
Match:
A0A6J1C050 (dicer-like protein 4 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007071 PE=3 SV=1)
HSP 1 Score: 2687.1 bits (6964), Expect = 0.0e+00
Identity = 1369/1640 (83.48%), Postives = 1471/1640 (89.70%), Query Frame = 0
Query: 68 DNSKPSSLA-VEKLMGLSLVGDPGAGSSSRASEKDPRRVARKYQLELCKKALEENIIVYL 127
DN + +SL VE +GLSLV D G SSRASEKDPRR ARKYQLELCKKALEENII+YL
Sbjct: 15 DNFQHTSLGPVESFVGLSLVDDQEPGPSSRASEKDPRRKARKYQLELCKKALEENIILYL 74
Query: 128 GTGCGKTHIAILLIYEMRNLIRRSQKGICVFLAPTVALVQQQAKVIEDSIDFKVRVYCGG 187
GTGCGKTHIA+LL+YEMR+LIRRSQKGICVFLAPTVALVQQQAKVIEDS DFKVRVYCGG
Sbjct: 75 GTGCGKTHIAVLLMYEMRHLIRRSQKGICVFLAPTVALVQQQAKVIEDSTDFKVRVYCGG 134
Query: 188 FKGLNSHYDWEREMEEHEVFVMTPQTLLRSLNHCYIKMEFVELLIFDECHHAQVKSDHSY 247
K LNSHYDWEREMEEHEVFVMTP+ LLR+L+HCYIKMEFVELLIFDECHHAQVKSDHSY
Sbjct: 135 SKCLNSHYDWEREMEEHEVFVMTPEILLRTLHHCYIKMEFVELLIFDECHHAQVKSDHSY 194
Query: 248 AQIMKVFYKGSVAKRPRIFGMTASPVVGKGTCNQQSLSKSINSLEKLLDAKVYSVEDRED 307
A+IM+VFYK +VAKRPRIFGMTASPVVGKG CNQQ+LSKSINSLEKLLDAKVYSVEDRE+
Sbjct: 195 AEIMRVFYKTNVAKRPRIFGMTASPVVGKGACNQQNLSKSINSLEKLLDAKVYSVEDREE 254
Query: 308 LEAFVSSPLVKIYYYGPVANGSSSSFMTYCCQLEEVKRQCVVALGQMKGEHEGLLATKKL 367
L+AFVSSPLVKIYYYGPVANG S SFMTYC LE++KRQC+V LGQMKGEHE L ATKKL
Sbjct: 255 LDAFVSSPLVKIYYYGPVANGLSGSFMTYCSLLEDMKRQCIVVLGQMKGEHEDLRATKKL 314
Query: 368 LLRMHDNIIFCLENLGVWGALQASKILLSGDNSERSELIEAAEGNPNNDSLSDRYLNQAA 427
L RMHDNIIFCLENLGVWGALQASKILLSGDNSERSELIEAAEGNPNN SLSDRYLNQAA
Sbjct: 315 LCRMHDNIIFCLENLGVWGALQASKILLSGDNSERSELIEAAEGNPNNHSLSDRYLNQAA 374
Query: 428 EILASGCKIDGGMPDMLNVDILEDPFFSKKLLRLIGILSSFGHRLNMKCIIFVNRIVIAR 487
EILA GCKI GGM D LN DILE PFFSKKLL+LI ILSSF HRLNMKCIIFVNRIVIAR
Sbjct: 375 EILAKGCKIGGGMSDTLNADILEYPFFSKKLLQLIEILSSFRHRLNMKCIIFVNRIVIAR 434
Query: 488 SLSYILQNLKFLAYWKCDFLVGVHSKLRSMSRKTMNRILTKFRSGELNLLIATKVGEEGL 547
SLSYILQNL+FLA+WKCD+LVGVHSKLRSMSRKTMN IL KFRSGELNLL+ATKVGEEGL
Sbjct: 435 SLSYILQNLEFLAFWKCDYLVGVHSKLRSMSRKTMNHILMKFRSGELNLLVATKVGEEGL 494
Query: 548 DIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAFIVDRGNEKERGLIDGFQKDENHMN 607
DIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAF+VD GNEKE GLID FQKDEN M+
Sbjct: 495 DIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAFLVDSGNEKELGLIDEFQKDENRMD 554
Query: 608 REISSRSSNETFQSHEESIYRVVSTGASVTSGLSISLLHEYCSKLPHDEYFDPKPKFFYY 667
REISSRSS+E F SHEESIYRV STGAS+TSG SISLLHE+CSKLPHDEYFDPKPKFFYY
Sbjct: 555 REISSRSSSEIFNSHEESIYRVASTGASITSGRSISLLHEFCSKLPHDEYFDPKPKFFYY 614
Query: 668 DDLEGTICHAILPSNAPIPQVVSRVQFSRDAAKKDACLKAIEELHKLGAFNDFLLPMRDN 727
DDL GT+CHAILPSNAPI Q++SR Q SR+ AKKDAC+KAIEELHKLGA NDFLLPMRD+
Sbjct: 615 DDLAGTVCHAILPSNAPIHQIISRTQPSREGAKKDACIKAIEELHKLGALNDFLLPMRDD 674
Query: 728 AIEEELELASCDSDSSEDETSRRELHEMLVPTALKDSWTGSGNVILNCYQIKISPHPGDR 787
A EEELEL S DSD SEDETSR ELHEMLVP ALKDSWTGSG ILNCYQIK SPHP DR
Sbjct: 675 ANEEELELDSSDSDRSEDETSRGELHEMLVPAALKDSWTGSGYFILNCYQIKFSPHPRDR 734
Query: 788 IYKEFGLFVKAPLPQEAERIDLELHLARSRYVKVNLVPSGVVELLEDEITQAESFQEMFL 847
IYKEFGLFVKA LPQEAER+D+ELHLAR R V VNLVPSGVVELLEDEITQAESFQEMFL
Sbjct: 735 IYKEFGLFVKAALPQEAERMDIELHLARGRSVMVNLVPSGVVELLEDEITQAESFQEMFL 794
Query: 848 KVILDRSEFVQDYVPLRNNVSGSISSASYLLLPMIFQDNEGSSLIDWKVIRRCLSSQIFQ 907
KVILDRSEFVQ+++PLRNNVS SISS SYLLLP+IF DNE S IDWKVIRRCL S IFQ
Sbjct: 795 KVILDRSEFVQEFIPLRNNVSKSISSTSYLLLPLIFHDNERSVSIDWKVIRRCLFSPIFQ 854
Query: 908 NHACSAVRETASSDTHLTLYDGRRRLCDIENSLVYVPYKREFFFVTHIVRSKNGYSR--Y 967
S V+ETA S HLTLYDGRRR DI+NSLVYVPYKREFFFVT IV+ KNGYSR Y
Sbjct: 855 IPG-SIVKETACSHAHLTLYDGRRRTSDIKNSLVYVPYKREFFFVTDIVKGKNGYSRSHY 914
Query: 968 KNSGSLSHFEHLLERFDIHLKYPEQPLLCAKPLFHLHNLLHDRRLNDSEACDLIEHLIDL 1027
KNS S SHFEHL+ERF IHLKYPEQPLL AKPLFHLHNLLHDRR +SEAC L E+ IDL
Sbjct: 915 KNSSSSSHFEHLIERFGIHLKYPEQPLLSAKPLFHLHNLLHDRRQGNSEACYLQEYFIDL 974
Query: 1028 PPELCQLKITGFTKDIGSSISLLPSFMHHLENFLVAIELKCTLAAAFPAASEVTSNRILE 1087
PPELCQLKI GF+KDIGSSISLLPS MH LEN LVAIELKC LAAAFP +EVT+NRILE
Sbjct: 975 PPELCQLKIIGFSKDIGSSISLLPSIMHRLENLLVAIELKCMLAAAFPDGAEVTANRILE 1034
Query: 1088 ALTTEKCQERISLERLEILGDAFLKFAVARHLFLTHDKFDEGELTRRRSYLVKNINLFKL 1147
ALTTEKCQERISLERLEILGD FLKFAVAR+LFLTHDK DEGELTRRRSYLVKNINLFKL
Sbjct: 1035 ALTTEKCQERISLERLEILGDGFLKFAVARYLFLTHDKSDEGELTRRRSYLVKNINLFKL 1094
Query: 1148 ATRKNLQVYIRDQPFEPNQFYSLGRPCPRICNEETRKDIHSH----KNAKGGETKCSKGH 1207
ATRKNLQVYIRDQPFEP+QFY+LGRPCPRICNEETR+DIHSH KNA+ ETKCS+GH
Sbjct: 1095 ATRKNLQVYIRDQPFEPSQFYTLGRPCPRICNEETREDIHSHCNATKNAQASETKCSRGH 1154
Query: 1208 HWLHKKTISDVVEALVGAFLVDSGFKAAIAFLKWIGIQVEFEASQVTDARMASNAYLRLA 1267
HWLHKKTISDVVEALVGAFLVDSGFKAAI+FLKWIGIQVEFEAS VT+A M+SNAY+ LA
Sbjct: 1155 HWLHKKTISDVVEALVGAFLVDSGFKAAISFLKWIGIQVEFEASLVTNALMSSNAYIILA 1214
Query: 1268 DCISISALQDSLGHQFLYKGLLLQALIHPSYHRHGGGCYQRLEFLGDAVLDYLITSYLYS 1327
D I+IS LQ+SLGHQFL+KGLLLQAL+HPSYH+HGGGCYQRLEFLGDAVLDYLITSYLYS
Sbjct: 1215 DRINISVLQNSLGHQFLHKGLLLQALVHPSYHKHGGGCYQRLEFLGDAVLDYLITSYLYS 1274
Query: 1328 VYPKLKPGLVTDLRSVFVMNEAFANISVDRFFYKFLICDSTSLQKDIKSYVNFIKSPPSE 1387
YPKLKPGL+TDLRSVFV NEAFAN++VDR FYK+LICDSTSLQ DIKSYVNFIK+P S
Sbjct: 1275 AYPKLKPGLLTDLRSVFVRNEAFANVAVDRSFYKYLICDSTSLQSDIKSYVNFIKAPSSG 1334
Query: 1388 RGSLEQPTCPKVLGDMVESIVGAVLVDTGFDMNYVWKIMLSFLDSIMSFSGFQLSPIRDI 1447
GSL P+CPK LGD+VES VGAVLVDTGFDMNYVWKIMLSFLD I+SFSGFQLSPIRDI
Sbjct: 1335 SGSLGLPSCPKALGDLVESCVGAVLVDTGFDMNYVWKIMLSFLDPIISFSGFQLSPIRDI 1394
Query: 1448 TEFCQDCGWKLQFNATKVEKYFSVKAEVKGNNFHETASAANRRKKDAEKIAANLILSKLK 1507
EFCQDCG LQFN +K KY+SV+A+VKG+NFH TASAA+RRK+DA+KIAANLIL+KLK
Sbjct: 1395 IEFCQDCGSNLQFNESKTGKYYSVEADVKGDNFHATASAAHRRKRDAKKIAANLILTKLK 1454
Query: 1508 EKGFIPEVSSLEEILRSRKKMEPELIGFDETPSVSIDQADNGSGTIPGSEHSGAELDPCV 1567
+G IPEV+SLEEIL+S +KMEP+LIG+DETPSV++DQADNG GTI G E SGA+LDP V
Sbjct: 1455 AQGLIPEVNSLEEILKSSRKMEPKLIGYDETPSVTMDQADNGFGTIKGLESSGADLDPFV 1514
Query: 1568 NSEFSNSHSVRITRLSEAPEFSSVAAEEELKPS-TFGG----TNLQSSSGRSSKTTARSR 1627
+SE N+H RITR+S+ SS AA+E+L PS F G T++QSSSGR K TARSR
Sbjct: 1515 HSEVGNAHPARITRISKMLVSSSGAAQEQLDPSLAFDGHDSPTDVQSSSGRLCKATARSR 1574
Query: 1628 LYEICAANHWNQPSFDCMNEEGPGHLKMFTYKVVLEIEEAPDTIFEFFGASHSRKKAAAE 1687
LYEICAANHW+ PSFDCMNEEGP HLKMFTYKVVLEIEEAPDTIF+FFGA H RKKAAAE
Sbjct: 1575 LYEICAANHWSPPSFDCMNEEGPSHLKMFTYKVVLEIEEAPDTIFKFFGAPHLRKKAAAE 1634
Query: 1688 HAAEAALWYLKKEGYWNETD 1696
HAAEAA+WYLKKEGY ETD
Sbjct: 1635 HAAEAAIWYLKKEGYLPETD 1653
BLAST of Sed0002244 vs. ExPASy TrEMBL
Match:
A0A6J1JAJ5 (dicer-like protein 4 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485046 PE=3 SV=1)
HSP 1 Score: 2649.0 bits (6865), Expect = 0.0e+00
Identity = 1353/1655 (81.75%), Postives = 1455/1655 (87.92%), Query Frame = 0
Query: 64 SDFIDNSKPSSLAVEKLMGLSLVGDPGAGSSSRASEKDPRRVARKYQLELCKKALEENII 123
+D ++ S +VE+ MGLS V D G GSS R S KDPRR+ARKYQLELCKKALEENII
Sbjct: 11 ADSVNFQPTISASVERFMGLSPVDDQGEGSSIRTSGKDPRRIARKYQLELCKKALEENII 70
Query: 124 VYLGTGCGKTHIAILLIYEMRNLIRRSQKGICVFLAPTVALVQQQAKVIEDSIDFKVRVY 183
VYLGTGCGKTHIAILLIYEM +LIRR QKGICVFLAPTVALVQQQAKVIEDSIDFKV+VY
Sbjct: 71 VYLGTGCGKTHIAILLIYEMGHLIRRPQKGICVFLAPTVALVQQQAKVIEDSIDFKVKVY 130
Query: 184 CGGFKGLNSHYDWEREMEEHEVFVMTPQTLLRSLNHCYIKMEFVELLIFDECHHAQVKSD 243
CGG K LNSHYDWEREMEE+EVFVMTP+ LLR+L+HCYIKMEFVELLIFDECHHAQVKSD
Sbjct: 131 CGGSKCLNSHYDWEREMEEYEVFVMTPEILLRNLHHCYIKMEFVELLIFDECHHAQVKSD 190
Query: 244 HSYAQIMKVFYKGSVAKRPRIFGMTASPVVGKGTCNQQSLSKSINSLEKLLDAKVYSVED 303
HSYA+IM+VFYK + KRPRIFGMTASPVVGKG CNQQ+LSKSINSLEKLLDAKVYSVED
Sbjct: 191 HSYAEIMRVFYKANEHKRPRIFGMTASPVVGKGACNQQNLSKSINSLEKLLDAKVYSVED 250
Query: 304 REDLEAFVSSPLVKIYYYGPVANGSSSSFMTYCCQLEEVKRQCVVALGQMKGEHEGLLAT 363
RE+LEAFVSSP KIYYYGPVA GSSSSFMTYCC LE+VK QC+VALGQMKGEHEGLLAT
Sbjct: 251 REELEAFVSSPRFKIYYYGPVATGSSSSFMTYCCPLEDVKCQCIVALGQMKGEHEGLLAT 310
Query: 364 KKLLLRMHDNIIFCLENLGVWGALQASKILLSGDNSERSELIEAAEGNPNNDSLSDRYLN 423
KKLL RMH NIIFCLENLGVWGALQASKILLS DNSERSELIEAAEGNP DS+SDRYLN
Sbjct: 311 KKLLCRMHKNIIFCLENLGVWGALQASKILLSEDNSERSELIEAAEGNPKYDSISDRYLN 370
Query: 424 QAAEILASGCKIDGGMPDMLNVDILEDPFFSKKLLRLIGILSSFGHRLNMKCIIFVNRIV 483
QAAEI ASGCKID G+ DMLNVDIL++P FSKKLLRLIGILSSF HR NMKCIIFVNRIV
Sbjct: 371 QAAEIFASGCKIDAGVSDMLNVDILKEPCFSKKLLRLIGILSSFRHRPNMKCIIFVNRIV 430
Query: 484 IARSLSYILQNLKFLAYWKCDFLVGVHSKLRSMSRKTMNRILTKFRSGELNLLIATKVGE 543
IARSLSYILQNLKFLAYWKCDFLVGVHSKLRSMSRKTMN ILTKFRSGELNLLIATKVGE
Sbjct: 431 IARSLSYILQNLKFLAYWKCDFLVGVHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGE 490
Query: 544 EGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAFIVDRGNEKERGLIDGFQKDEN 603
EGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAF+VD GNEK+ GLID F KDE
Sbjct: 491 EGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAFLVDSGNEKDLGLIDEFHKDEK 550
Query: 604 HMNREISSRSSNETFQSHEESIYRVVSTGASVTSGLSISLLHEYCSKLPHDEYFDPKPKF 663
MNREISSRSS ETF HEESIYRVVSTGASVTSG SISLLHEYCSKLPHD YFDPKPKF
Sbjct: 551 RMNREISSRSSIETFDGHEESIYRVVSTGASVTSGRSISLLHEYCSKLPHDTYFDPKPKF 610
Query: 664 FYYDDLEGTICHAILPSNAPIPQVVSRVQFSRDAAKKDACLKAIEELHKLGAFNDFLLPM 723
FY DDL GTICHAILPSNAPIPQ+VSR Q S AAKKDACLKA+EELHKLGA +D+LLPM
Sbjct: 611 FYCDDLGGTICHAILPSNAPIPQIVSRPQPSGVAAKKDACLKAVEELHKLGALSDYLLPM 670
Query: 724 RDNAIEEELELASCDSDSSEDETSRRELHEMLVPTALKDSWTGSGNVILNCYQIKISPHP 783
RDNA E ELEL S DSDSSEDETSR ELHEM+ P A K+SWTG G VIL CY IK +P+P
Sbjct: 671 RDNANEGELELDS-DSDSSEDETSRLELHEMISPAAFKESWTGFGYVILYCYHIKFTPNP 730
Query: 784 GDRIYKEFGLFVKAPLPQEAERIDLELHLARSRYVKVNLVPSGVVELLEDEITQAESFQE 843
DRIYKEFGLFVKAPLPQEA R+DLELHLA R VKVNL+PS VVELLE+EITQAE FQE
Sbjct: 731 EDRIYKEFGLFVKAPLPQEAVRMDLELHLAHGRSVKVNLMPSRVVELLENEITQAECFQE 790
Query: 844 MFLKVILDRSEFVQDYVPLRNNVSGSISSASYLLLPMIFQDNEGSSLIDWKVIRRCLSSQ 903
MFLKVILDRSEFV DY+PLRNNVS SISS SYLLLP+I DNEGS IDWKVIRRCLSSQ
Sbjct: 791 MFLKVILDRSEFVHDYIPLRNNVSRSISSTSYLLLPVIVHDNEGSVFIDWKVIRRCLSSQ 850
Query: 904 IFQNHACSAVRETASSDTHLTLYDGRRRLCDIENSLVYVPYKREFFFVTHIVRSKNGYSR 963
IFQNHACS ++ETASSDTHL LYDGRRR DIENSLVYVPYKREFFFVT+IVR KNGYS+
Sbjct: 851 IFQNHACSIIKETASSDTHLMLYDGRRRSSDIENSLVYVPYKREFFFVTNIVRRKNGYSQ 910
Query: 964 YKNSGSLSHFEHLLERFDIHLKYPEQPLLCAKPLFHLHNLLHDRRLNDSEACDLIEHLID 1023
YK+SGSLSHFEHL RF IHLKYPEQPLLCAKPLF LHNLLH+R+ DSEA L E+ ID
Sbjct: 911 YKDSGSLSHFEHLKTRFGIHLKYPEQPLLCAKPLFSLHNLLHNRKQKDSEAPYLEEYFID 970
Query: 1024 LPPELCQLKITGFTKDIGSSISLLPSFMHHLENFLVAIELKCTLAAAFPAASEVTSNRIL 1083
+ PELCQLKITGF+KDIGSSISLLPS MH LEN LVAIELKC LAAAFPA +EVT+NRIL
Sbjct: 971 VAPELCQLKITGFSKDIGSSISLLPSIMHRLENLLVAIELKCMLAAAFPAGAEVTANRIL 1030
Query: 1084 EALTTEKCQERISLERLEILGDAFLKFAVARHLFLTHDKFDEGELTRRRSYLVKNINLFK 1143
EALTTEKCQER SLERLEILGD+FLKFAVAR+LFL HDKFDEGELTRRRSYLVKNINLFK
Sbjct: 1031 EALTTEKCQERFSLERLEILGDSFLKFAVARYLFLAHDKFDEGELTRRRSYLVKNINLFK 1090
Query: 1144 LATRKNLQVYIRDQPFEPNQFYSLGRPCPRICNEETRKDIHSH----KNAKGGETKCSKG 1203
LATRKNLQVYIRDQPFEP+QFY LGRPCPRICNEETR DIHSH NAK ETKCSKG
Sbjct: 1091 LATRKNLQVYIRDQPFEPSQFYLLGRPCPRICNEETRNDIHSHDNATNNAKFSETKCSKG 1150
Query: 1204 HHWLHKKTISDVVEALVGAFLVDSGFKAAIAFLKWIGIQVEFEASQVTDARMASNAYLRL 1263
HHWL KKTISD+VEAL+GAFLVDSGFKAAIAFLKWIGI+VEFEASQVT+A +AS AY+
Sbjct: 1151 HHWLQKKTISDMVEALIGAFLVDSGFKAAIAFLKWIGIKVEFEASQVTNALVASKAYVLF 1210
Query: 1264 ADCISISALQDSLGHQFLYKGLLLQALIHPSYHRHGGGCYQRLEFLGDAVLDYLITSYLY 1323
AD I+ISALQ SLGH+FL+KGLLLQAL+HP+YH+HGGGCYQRLEFLGDAVLDYLI SYLY
Sbjct: 1211 ADTINISALQSSLGHKFLHKGLLLQALVHPTYHKHGGGCYQRLEFLGDAVLDYLIMSYLY 1270
Query: 1324 SVYPKLKPGLVTDLRSVFVMNEAFANISVDRFFYKFLICDSTSLQKDIKSYVNFIKSPPS 1383
SVYPKLKPGL+TDLRSVFV NEAFAN++VDRFFYKFL+CDS SL+ DIKSYV+FIK+PPS
Sbjct: 1271 SVYPKLKPGLLTDLRSVFVRNEAFANVAVDRFFYKFLLCDSASLESDIKSYVDFIKAPPS 1330
Query: 1384 ERGSLEQPTCPKVLGDMVESIVGAVLVDTGFDMNYVWKIMLSFLDSIMSFSGFQLSPIRD 1443
ER SLEQP CPK LGD+VES VGAVLVDTGFDMNYVWKIMLSFLD IMS SGFQLSPIRD
Sbjct: 1331 ERDSLEQPRCPKPLGDLVESSVGAVLVDTGFDMNYVWKIMLSFLDPIMSSSGFQLSPIRD 1390
Query: 1444 ITEFCQDCGWKLQFNATKVEKYFSVKAEVKGNNFHETASAANRRKKDAEKIAANLILSKL 1503
I E CQ+CGWKLQFN +K+EKY+SV+AEVKG++FH TASA NRRKKDAEKIAAN IL KL
Sbjct: 1391 IIEVCQNCGWKLQFNPSKMEKYYSVEAEVKGDDFHATASAVNRRKKDAEKIAANAILRKL 1450
Query: 1504 KEKGFIPEVSSLEEILRSRKKMEPELIGFDETPSVSIDQADNGSGTIPGSEHSGAELDPC 1563
K +GFIPEV+SLE+IL+S +KM+P+LIG+DETPSV++D+ D+ G E SGA+LDP
Sbjct: 1451 KAQGFIPEVNSLEKILKSSEKMKPKLIGYDETPSVTMDRIDD------GLEFSGADLDPL 1510
Query: 1564 VNSEFSNSHSVRITRLSEAPEFSSVAAEEELKP-------------------STFGGTNL 1623
V+ E NS RITR+SE SS AA E+LKP S+ ++
Sbjct: 1511 VHREVGNSRPFRITRMSETLASSSGAAGEQLKPSIPLEGHDSSTDLLSSSSSSSSSSSSS 1570
Query: 1624 QSSSGRSSKTTARSRLYEICAANHWNQPSFDCMNEEGPGHLKMFTYKVVLEIEEAPDTIF 1683
SSSGRS KTTARSRLYE+CA NHWN PSF+CMNEEGP HLKMFTYKVVLEIEEAPDTIF
Sbjct: 1571 SSSSGRSGKTTARSRLYEVCAINHWNHPSFNCMNEEGPSHLKMFTYKVVLEIEEAPDTIF 1630
Query: 1684 EFFGASHSRKKAAAEHAAEAALWYLKKEGYWNETD 1696
EFFGA H KKAAAEHAAEAALWYLKKE Y +TD
Sbjct: 1631 EFFGAPHLTKKAAAEHAAEAALWYLKKERYLGDTD 1658
BLAST of Sed0002244 vs. ExPASy TrEMBL
Match:
A0A6J1E1P4 (dicer-like protein 4 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111429985 PE=3 SV=1)
HSP 1 Score: 2648.6 bits (6864), Expect = 0.0e+00
Identity = 1354/1651 (82.01%), Postives = 1456/1651 (88.19%), Query Frame = 0
Query: 64 SDFIDNSKPSSLAVEKLMGLSLVGDPGAGSSSRASEKDPRRVARKYQLELCKKALEENII 123
+D ++ SS +VE+ MGLS V D GAGSS R S KDPRR+ARKYQLELC+KALEENII
Sbjct: 11 ADSVNFQPTSSASVERFMGLSPVDDQGAGSSIRTSGKDPRRIARKYQLELCEKALEENII 70
Query: 124 VYLGTGCGKTHIAILLIYEMRNLIRRSQKGICVFLAPTVALVQQQAKVIEDSIDFKVRVY 183
VYLGTGCGKTHIAILLIYEM +LIRR QKGICVFLAPTVALVQQQAKVIEDSIDFKV+VY
Sbjct: 71 VYLGTGCGKTHIAILLIYEMGHLIRRPQKGICVFLAPTVALVQQQAKVIEDSIDFKVKVY 130
Query: 184 CGGFKGLNSHYDWEREMEEHEVFVMTPQTLLRSLNHCYIKMEFVELLIFDECHHAQVKSD 243
CGG K LNSHYDWEREMEE+EVFVMTP+ LLR+L+HCYI+MEFVELLIFDECHHAQVKSD
Sbjct: 131 CGGSKCLNSHYDWEREMEEYEVFVMTPEILLRNLHHCYIRMEFVELLIFDECHHAQVKSD 190
Query: 244 HSYAQIMKVFYKGSVAKRPRIFGMTASPVVGKGTCNQQSLSKSINSLEKLLDAKVYSVED 303
HSYA+IM+VFYK + KRPRIFGMTASPVVGKG CNQQ+LSKSINSLEKLLDAKVYSVED
Sbjct: 191 HSYAEIMRVFYKANEHKRPRIFGMTASPVVGKGACNQQNLSKSINSLEKLLDAKVYSVED 250
Query: 304 REDLEAFVSSPLVKIYYYGPVANGSSSSFMTYCCQLEEVKRQCVVALGQMKGEHEGLLAT 363
RE+LEAFVSSP KIYYYGPVA GSSSSFMTYCC LE+VK QC+VALGQMKGEHEGLLAT
Sbjct: 251 REELEAFVSSPRFKIYYYGPVATGSSSSFMTYCCPLEDVKCQCIVALGQMKGEHEGLLAT 310
Query: 364 KKLLLRMHDNIIFCLENLGVWGALQASKILLSGDNSERSELIEAAEGNPNNDSLSDRYLN 423
KKLL RMH NIIFCLENLGVWGALQASKILLS DNSERSELIEAA NP +DS+SDRYLN
Sbjct: 311 KKLLCRMHKNIIFCLENLGVWGALQASKILLSEDNSERSELIEAAAANPKHDSISDRYLN 370
Query: 424 QAAEILASGCKIDGGMPDMLNVDILEDPFFSKKLLRLIGILSSFGHRLNMKCIIFVNRIV 483
QAAEI ASGCKID G+ DMLNVDIL++P FSKKLLRLIGILSSF HR NMKCIIFVNRIV
Sbjct: 371 QAAEIFASGCKIDAGVSDMLNVDILKEPCFSKKLLRLIGILSSFRHRPNMKCIIFVNRIV 430
Query: 484 IARSLSYILQNLKFLAYWKCDFLVGVHSKLRSMSRKTMNRILTKFRSGELNLLIATKVGE 543
IARSLSYILQNLKFLAYWKCDFLVGVHSKLRSMSRKTMN ILTKFRSGELNLLIATKVGE
Sbjct: 431 IARSLSYILQNLKFLAYWKCDFLVGVHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGE 490
Query: 544 EGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAFIVDRGNEKERGLIDGFQKDEN 603
EGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAF+VD GNEKE GLID F KDE
Sbjct: 491 EGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAFLVDSGNEKELGLIDEFHKDEK 550
Query: 604 HMNREISSRSSNETFQSHEESIYRVVSTGASVTSGLSISLLHEYCSKLPHDEYFDPKPKF 663
MNREISSRSS ETF HEESIYRV+STGASVTSG SISLLHEYCSKLPHD YFDPKPKF
Sbjct: 551 RMNREISSRSSVETFDGHEESIYRVISTGASVTSGRSISLLHEYCSKLPHDTYFDPKPKF 610
Query: 664 FYYDDLEGTICHAILPSNAPIPQVVSRVQFSRDAAKKDACLKAIEELHKLGAFNDFLLPM 723
FY DDL GTICHAILPSNAPIPQ+VSR Q S AAKKDACLKA+EELHKLGA +D+LLPM
Sbjct: 611 FYCDDLGGTICHAILPSNAPIPQIVSRPQPSGVAAKKDACLKAVEELHKLGALSDYLLPM 670
Query: 724 RDNAIEEELELASCDSDSSEDETSRRELHEMLVPTALKDSWTGSGNVILNCYQIKISPHP 783
RDNA E ELEL S DSDSSEDETSRRELHEM+ P A K+SWTG G VIL CY IK +P+P
Sbjct: 671 RDNANEGELELDS-DSDSSEDETSRRELHEMISPAAFKESWTGFGYVILYCYHIKFTPNP 730
Query: 784 GDRIYKEFGLFVKAPLPQEAERIDLELHLARSRYVKVNLVPSGVVELLEDEITQAESFQE 843
DRIYKEFGLFVKAPLPQEA R+DLELHLA R VKVNL+PS VVEL+E+EITQAE FQE
Sbjct: 731 EDRIYKEFGLFVKAPLPQEAVRMDLELHLAHGRSVKVNLMPSRVVELMENEITQAECFQE 790
Query: 844 MFLKVILDRSEFVQDYVPLRNNVSGSISSASYLLLPMIFQDNEGSSLIDWKVIRRCLSSQ 903
MFLKVILDRSEFV DY+PLRNNVS SISS SYLLLP+I D EGS IDWKVIRRCLSSQ
Sbjct: 791 MFLKVILDRSEFVHDYIPLRNNVSRSISSTSYLLLPVIVHDIEGSVFIDWKVIRRCLSSQ 850
Query: 904 IFQNHACSAVRETASSDTHLTLYDGRRRLCDIENSLVYVPYKREFFFVTHIVRSKNGYSR 963
IFQNHACS V+ETASSDTHL LYDGRRR DIENSLVYVPYKREFFFVT+IVR KNGYS+
Sbjct: 851 IFQNHACSIVKETASSDTHLILYDGRRRSSDIENSLVYVPYKREFFFVTNIVRRKNGYSQ 910
Query: 964 YKNSGSLSHFEHLLERFDIHLKYPEQPLLCAKPLFHLHNLLHDRRLNDSEACDLIEHLID 1023
YK+SGSLSHFEHL RF I LKYPEQPLLCAKPLF LHNLLHDR+ DSEA L E+ ID
Sbjct: 911 YKDSGSLSHFEHLKTRFGIQLKYPEQPLLCAKPLFSLHNLLHDRKQKDSEAPYLEEYFID 970
Query: 1024 LPPELCQLKITGFTKDIGSSISLLPSFMHHLENFLVAIELKCTLAAAFPAASEVTSNRIL 1083
+ PELCQLKITGF+KDIGSSISLLPS MH LEN LVAIELKC LAA FPA +EVT+NRIL
Sbjct: 971 IAPELCQLKITGFSKDIGSSISLLPSIMHRLENLLVAIELKCMLAAGFPAGAEVTANRIL 1030
Query: 1084 EALTTEKCQERISLERLEILGDAFLKFAVARHLFLTHDKFDEGELTRRRSYLVKNINLFK 1143
EALTTEKCQERISLERLEILGD+FLKFAVAR+LFL HDKFDEGELTRRRSYLVKNINLFK
Sbjct: 1031 EALTTEKCQERISLERLEILGDSFLKFAVARYLFLAHDKFDEGELTRRRSYLVKNINLFK 1090
Query: 1144 LATRKNLQVYIRDQPFEPNQFYSLGRPCPRICNEETRKDIHSH----KNAKGGETKCSKG 1203
LATRKNLQVYIRDQPFEP+QFY LGRPCPRICNEETR DIHSH NAK ETKCSKG
Sbjct: 1091 LATRKNLQVYIRDQPFEPSQFYLLGRPCPRICNEETRNDIHSHDNATNNAKASETKCSKG 1150
Query: 1204 HHWLHKKTISDVVEALVGAFLVDSGFKAAIAFLKWIGIQVEFEASQVTDARMASNAYLRL 1263
HHWL KKTISDVVEALVGAFLVDSGFKAAIAFLKWIGI+VEFEASQVT+A +AS AY+ L
Sbjct: 1151 HHWLQKKTISDVVEALVGAFLVDSGFKAAIAFLKWIGIKVEFEASQVTNALVASKAYVLL 1210
Query: 1264 ADCISISALQDSLGHQFLYKGLLLQALIHPSYHRHGGGCYQRLEFLGDAVLDYLITSYLY 1323
AD I+ISALQ SLG++FL+KGLLLQAL+HP+YH+HGGGCYQRLEFLGDAVLDYLI SYLY
Sbjct: 1211 ADTINISALQSSLGYKFLHKGLLLQALVHPTYHKHGGGCYQRLEFLGDAVLDYLIMSYLY 1270
Query: 1324 SVYPKLKPGLVTDLRSVFVMNEAFANISVDRFFYKFLICDSTSLQKDIKSYVNFIKSPPS 1383
S YPKLKPGL+TDLRSVFV NEAFAN++VDRFFYKFL+CDS SLQ DIKSYV+FIKS PS
Sbjct: 1271 SAYPKLKPGLLTDLRSVFVRNEAFANVAVDRFFYKFLLCDSASLQSDIKSYVDFIKSLPS 1330
Query: 1384 ERGSLEQPTCPKVLGDMVESIVGAVLVDTGFDMNYVWKIMLSFLDSIMSFSGFQLSPIRD 1443
ER SLEQP CPK LGD+VES VGAVLVDTGFDMNYVWKIMLSFLD IMS SGFQLSPIRD
Sbjct: 1331 ERDSLEQPRCPKPLGDLVESSVGAVLVDTGFDMNYVWKIMLSFLDPIMSSSGFQLSPIRD 1390
Query: 1444 ITEFCQDCGWKLQFNATKVEKYFSVKAEVKGNNFHETASAANRRKKDAEKIAANLILSKL 1503
I E CQ+CGWKLQFN +K+EKY+SV+AEVKG++FH TASA NRRKKDAEKIAAN IL+KL
Sbjct: 1391 IIEVCQNCGWKLQFNPSKMEKYYSVEAEVKGDDFHATASAVNRRKKDAEKIAANSILTKL 1450
Query: 1504 KEKGFIPEVSSLEEILRSRKKMEPELIGFDETPSVSIDQADNGSGTIPGSEHSGAELDPC 1563
K +GFIPEV+SLE+IL+S +KM+P+LIG+DETPSV++DQ D+ G E SGA+LDP
Sbjct: 1451 KAQGFIPEVNSLEKILKSSEKMKPKLIGYDETPSVTMDQIDD------GLEFSGADLDPR 1510
Query: 1564 VNSEFSNSHSVRITRLSEAPEFSSVAAEEELKP---------------STFGGTNLQSSS 1623
V+ E NSH RITR+SE SS AA E+LKP S+ ++ SSS
Sbjct: 1511 VHHEVGNSHPFRITRMSETLASSSGAAGEQLKPSIPLEGHDSSTDLLSSSSSSSSSSSSS 1570
Query: 1624 GRSSKTTARSRLYEICAANHWNQPSFDCMNEEGPGHLKMFTYKVVLEIEEAPDTIFEFFG 1683
GRS KTTARSRL+E+CA NHWN PSF+CMNEEGP HLKMFTYKVVLEIEEAPDTIFEFFG
Sbjct: 1571 GRSGKTTARSRLHEVCAINHWNHPSFNCMNEEGPSHLKMFTYKVVLEIEEAPDTIFEFFG 1630
Query: 1684 ASHSRKKAAAEHAAEAALWYLKKEGYWNETD 1696
A H KKAAAEHAAEAALWYLKKE Y +TD
Sbjct: 1631 APHLTKKAAAEHAAEAALWYLKKERYLGDTD 1654
BLAST of Sed0002244 vs. ExPASy TrEMBL
Match:
A0A6J1JJM5 (dicer-like protein 4 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485046 PE=3 SV=1)
HSP 1 Score: 2642.5 bits (6848), Expect = 0.0e+00
Identity = 1352/1655 (81.69%), Postives = 1454/1655 (87.85%), Query Frame = 0
Query: 64 SDFIDNSKPSSLAVEKLMGLSLVGDPGAGSSSRASEKDPRRVARKYQLELCKKALEENII 123
+D ++ S +VE+ MGLS V D G GSS R S KDPRR+ARKYQLELCKKALEENII
Sbjct: 11 ADSVNFQPTISASVERFMGLSPVDDQGEGSSIRTSGKDPRRIARKYQLELCKKALEENII 70
Query: 124 VYLGTGCGKTHIAILLIYEMRNLIRRSQKGICVFLAPTVALVQQQAKVIEDSIDFKVRVY 183
VYLGTGCGKTHIAILLIYEM +LIRR QKGICVFLAPTVALVQQQAKVIEDSIDFKV+VY
Sbjct: 71 VYLGTGCGKTHIAILLIYEMGHLIRRPQKGICVFLAPTVALVQQQAKVIEDSIDFKVKVY 130
Query: 184 CGGFKGLNSHYDWEREMEEHEVFVMTPQTLLRSLNHCYIKMEFVELLIFDECHHAQVKSD 243
CGG K LNSHYDWEREMEE+EVFVMTP+ LLR+L+HCYIKMEFVELLIFDECHHAQVKSD
Sbjct: 131 CGGSKCLNSHYDWEREMEEYEVFVMTPEILLRNLHHCYIKMEFVELLIFDECHHAQVKSD 190
Query: 244 HSYAQIMKVFYKGSVAKRPRIFGMTASPVVGKGTCNQQSLSKSINSLEKLLDAKVYSVED 303
HSYA+IM+VFYK + KRPRIFGMTASPVVGKG CNQQ+LSKSINSLEKLLDAKVYSVED
Sbjct: 191 HSYAEIMRVFYKANEHKRPRIFGMTASPVVGKGACNQQNLSKSINSLEKLLDAKVYSVED 250
Query: 304 REDLEAFVSSPLVKIYYYGPVANGSSSSFMTYCCQLEEVKRQCVVALGQMKGEHEGLLAT 363
RE+LEAFVSSP KIYYYGPVA GSSSSFMTYCC LE+VK QC+VALGQMKGEHEGLLAT
Sbjct: 251 REELEAFVSSPRFKIYYYGPVATGSSSSFMTYCCPLEDVKCQCIVALGQMKGEHEGLLAT 310
Query: 364 KKLLLRMHDNIIFCLENLGVWGALQASKILLSGDNSERSELIEAAEGNPNNDSLSDRYLN 423
KKLL RMH NIIFCLENLGVWGALQASKILLS DNSERSELIEAAEGNP DS+SDRYLN
Sbjct: 311 KKLLCRMHKNIIFCLENLGVWGALQASKILLSEDNSERSELIEAAEGNPKYDSISDRYLN 370
Query: 424 QAAEILASGCKIDGGMPDMLNVDILEDPFFSKKLLRLIGILSSFGHRLNMKCIIFVNRIV 483
QAAEI ASGCKID G+ DMLNVDIL++P FSKKLLRLIGILSSF HR NMKCIIFVNRIV
Sbjct: 371 QAAEIFASGCKIDAGVSDMLNVDILKEPCFSKKLLRLIGILSSFRHRPNMKCIIFVNRIV 430
Query: 484 IARSLSYILQNLKFLAYWKCDFLVGVHSKLRSMSRKTMNRILTKFRSGELNLLIATKVGE 543
IARSLSYILQNLKFLAYWKCDFLVGVHSKLRSMSRKTMN ILTKFRSGELNLLIATKVGE
Sbjct: 431 IARSLSYILQNLKFLAYWKCDFLVGVHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGE 490
Query: 544 EGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAFIVDRGNEKERGLIDGFQKDEN 603
EGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAF+VD GNEK+ GLID F KDE
Sbjct: 491 EGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAFLVDSGNEKDLGLIDEFHKDEK 550
Query: 604 HMNREISSRSSNETFQSHEESIYRVVSTGASVTSGLSISLLHEYCSKLPHDEYFDPKPKF 663
MNREISSRSS ETF HEESIYRVVSTGASVTSG SISLLHEYCSKLPHD YFDPKPKF
Sbjct: 551 RMNREISSRSSIETFDGHEESIYRVVSTGASVTSGRSISLLHEYCSKLPHDTYFDPKPKF 610
Query: 664 FYYDDLEGTICHAILPSNAPIPQVVSRVQFSRDAAKKDACLKAIEELHKLGAFNDFLLPM 723
FY DDL GTICHAILPSNAPIPQ+VSR Q S AAKKDACLKA+EELHKLGA +D+LLPM
Sbjct: 611 FYCDDLGGTICHAILPSNAPIPQIVSRPQPSGVAAKKDACLKAVEELHKLGALSDYLLPM 670
Query: 724 RDNAIEEELELASCDSDSSEDETSRRELHEMLVPTALKDSWTGSGNVILNCYQIKISPHP 783
RDNA E ELEL S DSDSSEDETSR ELHEM+ P A K+SWTG G VIL CY IK +P+P
Sbjct: 671 RDNANEGELELDS-DSDSSEDETSRLELHEMISPAAFKESWTGFGYVILYCYHIKFTPNP 730
Query: 784 GDRIYKEFGLFVKAPLPQEAERIDLELHLARSRYVKVNLVPSGVVELLEDEITQAESFQE 843
DRIYKEFGLFVKAPLPQEA R+DLELHLA R VKVNL+PS VVELLE+EITQAE FQE
Sbjct: 731 EDRIYKEFGLFVKAPLPQEAVRMDLELHLAHGRSVKVNLMPSRVVELLENEITQAECFQE 790
Query: 844 MFLKVILDRSEFVQDYVPLRNNVSGSISSASYLLLPMIFQDNEGSSLIDWKVIRRCLSSQ 903
MFLKVILDRSEFV DY+PLRNNVS SISS SYLLLP+I DNEGS IDWKVIRRCLSSQ
Sbjct: 791 MFLKVILDRSEFVHDYIPLRNNVSRSISSTSYLLLPVIVHDNEGSVFIDWKVIRRCLSSQ 850
Query: 904 IFQNHACSAVRETASSDTHLTLYDGRRRLCDIENSLVYVPYKREFFFVTHIVRSKNGYSR 963
IFQNHACS ++ETASSDTHL LYDGRRR DIENSLVYVPYKREFFFVT+IVR KNGYS+
Sbjct: 851 IFQNHACSIIKETASSDTHLMLYDGRRRSSDIENSLVYVPYKREFFFVTNIVRRKNGYSQ 910
Query: 964 YKNSGSLSHFEHLLERFDIHLKYPEQPLLCAKPLFHLHNLLHDRRLNDSEACDLIEHLID 1023
YK+SGSLSHFEHL RF IHLKYPEQPLLCAKPLF LHNLLH+R+ DS A L E+ ID
Sbjct: 911 YKDSGSLSHFEHLKTRFGIHLKYPEQPLLCAKPLFSLHNLLHNRKQKDS-APYLEEYFID 970
Query: 1024 LPPELCQLKITGFTKDIGSSISLLPSFMHHLENFLVAIELKCTLAAAFPAASEVTSNRIL 1083
+ PELCQLKITGF+KDIGSSISLLPS MH LEN LVAIELKC LAAAFPA +EVT+NRIL
Sbjct: 971 VAPELCQLKITGFSKDIGSSISLLPSIMHRLENLLVAIELKCMLAAAFPAGAEVTANRIL 1030
Query: 1084 EALTTEKCQERISLERLEILGDAFLKFAVARHLFLTHDKFDEGELTRRRSYLVKNINLFK 1143
EALTTEKCQER SLERLEILGD+FLKFAVAR+LFL HDKFDEGELTRRRSYLVKNINLFK
Sbjct: 1031 EALTTEKCQERFSLERLEILGDSFLKFAVARYLFLAHDKFDEGELTRRRSYLVKNINLFK 1090
Query: 1144 LATRKNLQVYIRDQPFEPNQFYSLGRPCPRICNEETRKDIHSH----KNAKGGETKCSKG 1203
LATRKNLQVYIRDQPFEP+QFY LGRPCPRICNEETR DIHSH NAK ETKCSKG
Sbjct: 1091 LATRKNLQVYIRDQPFEPSQFYLLGRPCPRICNEETRNDIHSHDNATNNAKFSETKCSKG 1150
Query: 1204 HHWLHKKTISDVVEALVGAFLVDSGFKAAIAFLKWIGIQVEFEASQVTDARMASNAYLRL 1263
HHWL KKTISD+VEAL+GAFLVDSGFKAAIAFLKWIGI+VEFEASQVT+A +AS AY+
Sbjct: 1151 HHWLQKKTISDMVEALIGAFLVDSGFKAAIAFLKWIGIKVEFEASQVTNALVASKAYVLF 1210
Query: 1264 ADCISISALQDSLGHQFLYKGLLLQALIHPSYHRHGGGCYQRLEFLGDAVLDYLITSYLY 1323
AD I+ISALQ SLGH+FL+KGLLLQAL+HP+YH+HGGGCYQRLEFLGDAVLDYLI SYLY
Sbjct: 1211 ADTINISALQSSLGHKFLHKGLLLQALVHPTYHKHGGGCYQRLEFLGDAVLDYLIMSYLY 1270
Query: 1324 SVYPKLKPGLVTDLRSVFVMNEAFANISVDRFFYKFLICDSTSLQKDIKSYVNFIKSPPS 1383
SVYPKLKPGL+TDLRSVFV NEAFAN++VDRFFYKFL+CDS SL+ DIKSYV+FIK+PPS
Sbjct: 1271 SVYPKLKPGLLTDLRSVFVRNEAFANVAVDRFFYKFLLCDSASLESDIKSYVDFIKAPPS 1330
Query: 1384 ERGSLEQPTCPKVLGDMVESIVGAVLVDTGFDMNYVWKIMLSFLDSIMSFSGFQLSPIRD 1443
ER SLEQP CPK LGD+VES VGAVLVDTGFDMNYVWKIMLSFLD IMS SGFQLSPIRD
Sbjct: 1331 ERDSLEQPRCPKPLGDLVESSVGAVLVDTGFDMNYVWKIMLSFLDPIMSSSGFQLSPIRD 1390
Query: 1444 ITEFCQDCGWKLQFNATKVEKYFSVKAEVKGNNFHETASAANRRKKDAEKIAANLILSKL 1503
I E CQ+CGWKLQFN +K+EKY+SV+AEVKG++FH TASA NRRKKDAEKIAAN IL KL
Sbjct: 1391 IIEVCQNCGWKLQFNPSKMEKYYSVEAEVKGDDFHATASAVNRRKKDAEKIAANAILRKL 1450
Query: 1504 KEKGFIPEVSSLEEILRSRKKMEPELIGFDETPSVSIDQADNGSGTIPGSEHSGAELDPC 1563
K +GFIPEV+SLE+IL+S +KM+P+LIG+DETPSV++D+ D+ G E SGA+LDP
Sbjct: 1451 KAQGFIPEVNSLEKILKSSEKMKPKLIGYDETPSVTMDRIDD------GLEFSGADLDPL 1510
Query: 1564 VNSEFSNSHSVRITRLSEAPEFSSVAAEEELKP-------------------STFGGTNL 1623
V+ E NS RITR+SE SS AA E+LKP S+ ++
Sbjct: 1511 VHREVGNSRPFRITRMSETLASSSGAAGEQLKPSIPLEGHDSSTDLLSSSSSSSSSSSSS 1570
Query: 1624 QSSSGRSSKTTARSRLYEICAANHWNQPSFDCMNEEGPGHLKMFTYKVVLEIEEAPDTIF 1683
SSSGRS KTTARSRLYE+CA NHWN PSF+CMNEEGP HLKMFTYKVVLEIEEAPDTIF
Sbjct: 1571 SSSSGRSGKTTARSRLYEVCAINHWNHPSFNCMNEEGPSHLKMFTYKVVLEIEEAPDTIF 1630
Query: 1684 EFFGASHSRKKAAAEHAAEAALWYLKKEGYWNETD 1696
EFFGA H KKAAAEHAAEAALWYLKKE Y +TD
Sbjct: 1631 EFFGAPHLTKKAAAEHAAEAALWYLKKERYLGDTD 1657
BLAST of Sed0002244 vs. ExPASy TrEMBL
Match:
A0A6J1E2I1 (dicer-like protein 4 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111429985 PE=3 SV=1)
HSP 1 Score: 2642.1 bits (6847), Expect = 0.0e+00
Identity = 1353/1651 (81.95%), Postives = 1455/1651 (88.13%), Query Frame = 0
Query: 64 SDFIDNSKPSSLAVEKLMGLSLVGDPGAGSSSRASEKDPRRVARKYQLELCKKALEENII 123
+D ++ SS +VE+ MGLS V D GAGSS R S KDPRR+ARKYQLELC+KALEENII
Sbjct: 11 ADSVNFQPTSSASVERFMGLSPVDDQGAGSSIRTSGKDPRRIARKYQLELCEKALEENII 70
Query: 124 VYLGTGCGKTHIAILLIYEMRNLIRRSQKGICVFLAPTVALVQQQAKVIEDSIDFKVRVY 183
VYLGTGCGKTHIAILLIYEM +LIRR QKGICVFLAPTVALVQQQAKVIEDSIDFKV+VY
Sbjct: 71 VYLGTGCGKTHIAILLIYEMGHLIRRPQKGICVFLAPTVALVQQQAKVIEDSIDFKVKVY 130
Query: 184 CGGFKGLNSHYDWEREMEEHEVFVMTPQTLLRSLNHCYIKMEFVELLIFDECHHAQVKSD 243
CGG K LNSHYDWEREMEE+EVFVMTP+ LLR+L+HCYI+MEFVELLIFDECHHAQVKSD
Sbjct: 131 CGGSKCLNSHYDWEREMEEYEVFVMTPEILLRNLHHCYIRMEFVELLIFDECHHAQVKSD 190
Query: 244 HSYAQIMKVFYKGSVAKRPRIFGMTASPVVGKGTCNQQSLSKSINSLEKLLDAKVYSVED 303
HSYA+IM+VFYK + KRPRIFGMTASPVVGKG CNQQ+LSKSINSLEKLLDAKVYSVED
Sbjct: 191 HSYAEIMRVFYKANEHKRPRIFGMTASPVVGKGACNQQNLSKSINSLEKLLDAKVYSVED 250
Query: 304 REDLEAFVSSPLVKIYYYGPVANGSSSSFMTYCCQLEEVKRQCVVALGQMKGEHEGLLAT 363
RE+LEAFVSSP KIYYYGPVA GSSSSFMTYCC LE+VK QC+VALGQMKGEHEGLLAT
Sbjct: 251 REELEAFVSSPRFKIYYYGPVATGSSSSFMTYCCPLEDVKCQCIVALGQMKGEHEGLLAT 310
Query: 364 KKLLLRMHDNIIFCLENLGVWGALQASKILLSGDNSERSELIEAAEGNPNNDSLSDRYLN 423
KKLL RMH NIIFCLENLGVWGALQASKILLS DNSERSELIEAA NP +DS+SDRYLN
Sbjct: 311 KKLLCRMHKNIIFCLENLGVWGALQASKILLSEDNSERSELIEAAAANPKHDSISDRYLN 370
Query: 424 QAAEILASGCKIDGGMPDMLNVDILEDPFFSKKLLRLIGILSSFGHRLNMKCIIFVNRIV 483
QAAEI ASGCKID G+ DMLNVDIL++P FSKKLLRLIGILSSF HR NMKCIIFVNRIV
Sbjct: 371 QAAEIFASGCKIDAGVSDMLNVDILKEPCFSKKLLRLIGILSSFRHRPNMKCIIFVNRIV 430
Query: 484 IARSLSYILQNLKFLAYWKCDFLVGVHSKLRSMSRKTMNRILTKFRSGELNLLIATKVGE 543
IARSLSYILQNLKFLAYWKCDFLVGVHSKLRSMSRKTMN ILTKFRSGELNLLIATKVGE
Sbjct: 431 IARSLSYILQNLKFLAYWKCDFLVGVHSKLRSMSRKTMNHILTKFRSGELNLLIATKVGE 490
Query: 544 EGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAFIVDRGNEKERGLIDGFQKDEN 603
EGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAF+VD GNEKE GLID F KDE
Sbjct: 491 EGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAFLVDSGNEKELGLIDEFHKDEK 550
Query: 604 HMNREISSRSSNETFQSHEESIYRVVSTGASVTSGLSISLLHEYCSKLPHDEYFDPKPKF 663
MNREISSRSS ETF HEESIYRV+STGASVTSG SISLLHEYCSKLPHD YFDPKPKF
Sbjct: 551 RMNREISSRSSVETFDGHEESIYRVISTGASVTSGRSISLLHEYCSKLPHDTYFDPKPKF 610
Query: 664 FYYDDLEGTICHAILPSNAPIPQVVSRVQFSRDAAKKDACLKAIEELHKLGAFNDFLLPM 723
FY DDL GTICHAILPSNAPIPQ+VSR Q S AAKKDACLKA+EELHKLGA +D+LLPM
Sbjct: 611 FYCDDLGGTICHAILPSNAPIPQIVSRPQPSGVAAKKDACLKAVEELHKLGALSDYLLPM 670
Query: 724 RDNAIEEELELASCDSDSSEDETSRRELHEMLVPTALKDSWTGSGNVILNCYQIKISPHP 783
RDNA E ELEL S DSDSSEDETSRRELHEM+ P A K+SWTG G VIL CY IK +P+P
Sbjct: 671 RDNANEGELELDS-DSDSSEDETSRRELHEMISPAAFKESWTGFGYVILYCYHIKFTPNP 730
Query: 784 GDRIYKEFGLFVKAPLPQEAERIDLELHLARSRYVKVNLVPSGVVELLEDEITQAESFQE 843
DRIYKEFGLFVKAPLPQEA R+DLELHLA R VKVNL+PS VVEL+E+EITQAE FQE
Sbjct: 731 EDRIYKEFGLFVKAPLPQEAVRMDLELHLAHGRSVKVNLMPSRVVELMENEITQAECFQE 790
Query: 844 MFLKVILDRSEFVQDYVPLRNNVSGSISSASYLLLPMIFQDNEGSSLIDWKVIRRCLSSQ 903
MFLKVILDRSEFV DY+PLRNNVS SISS SYLLLP+I D EGS IDWKVIRRCLSSQ
Sbjct: 791 MFLKVILDRSEFVHDYIPLRNNVSRSISSTSYLLLPVIVHDIEGSVFIDWKVIRRCLSSQ 850
Query: 904 IFQNHACSAVRETASSDTHLTLYDGRRRLCDIENSLVYVPYKREFFFVTHIVRSKNGYSR 963
IFQNHACS V+ETASSDTHL LYDGRRR DIENSLVYVPYKREFFFVT+IVR KNGYS+
Sbjct: 851 IFQNHACSIVKETASSDTHLILYDGRRRSSDIENSLVYVPYKREFFFVTNIVRRKNGYSQ 910
Query: 964 YKNSGSLSHFEHLLERFDIHLKYPEQPLLCAKPLFHLHNLLHDRRLNDSEACDLIEHLID 1023
YK+SGSLSHFEHL RF I LKYPEQPLLCAKPLF LHNLLHDR+ DS A L E+ ID
Sbjct: 911 YKDSGSLSHFEHLKTRFGIQLKYPEQPLLCAKPLFSLHNLLHDRKQKDS-APYLEEYFID 970
Query: 1024 LPPELCQLKITGFTKDIGSSISLLPSFMHHLENFLVAIELKCTLAAAFPAASEVTSNRIL 1083
+ PELCQLKITGF+KDIGSSISLLPS MH LEN LVAIELKC LAA FPA +EVT+NRIL
Sbjct: 971 IAPELCQLKITGFSKDIGSSISLLPSIMHRLENLLVAIELKCMLAAGFPAGAEVTANRIL 1030
Query: 1084 EALTTEKCQERISLERLEILGDAFLKFAVARHLFLTHDKFDEGELTRRRSYLVKNINLFK 1143
EALTTEKCQERISLERLEILGD+FLKFAVAR+LFL HDKFDEGELTRRRSYLVKNINLFK
Sbjct: 1031 EALTTEKCQERISLERLEILGDSFLKFAVARYLFLAHDKFDEGELTRRRSYLVKNINLFK 1090
Query: 1144 LATRKNLQVYIRDQPFEPNQFYSLGRPCPRICNEETRKDIHSH----KNAKGGETKCSKG 1203
LATRKNLQVYIRDQPFEP+QFY LGRPCPRICNEETR DIHSH NAK ETKCSKG
Sbjct: 1091 LATRKNLQVYIRDQPFEPSQFYLLGRPCPRICNEETRNDIHSHDNATNNAKASETKCSKG 1150
Query: 1204 HHWLHKKTISDVVEALVGAFLVDSGFKAAIAFLKWIGIQVEFEASQVTDARMASNAYLRL 1263
HHWL KKTISDVVEALVGAFLVDSGFKAAIAFLKWIGI+VEFEASQVT+A +AS AY+ L
Sbjct: 1151 HHWLQKKTISDVVEALVGAFLVDSGFKAAIAFLKWIGIKVEFEASQVTNALVASKAYVLL 1210
Query: 1264 ADCISISALQDSLGHQFLYKGLLLQALIHPSYHRHGGGCYQRLEFLGDAVLDYLITSYLY 1323
AD I+ISALQ SLG++FL+KGLLLQAL+HP+YH+HGGGCYQRLEFLGDAVLDYLI SYLY
Sbjct: 1211 ADTINISALQSSLGYKFLHKGLLLQALVHPTYHKHGGGCYQRLEFLGDAVLDYLIMSYLY 1270
Query: 1324 SVYPKLKPGLVTDLRSVFVMNEAFANISVDRFFYKFLICDSTSLQKDIKSYVNFIKSPPS 1383
S YPKLKPGL+TDLRSVFV NEAFAN++VDRFFYKFL+CDS SLQ DIKSYV+FIKS PS
Sbjct: 1271 SAYPKLKPGLLTDLRSVFVRNEAFANVAVDRFFYKFLLCDSASLQSDIKSYVDFIKSLPS 1330
Query: 1384 ERGSLEQPTCPKVLGDMVESIVGAVLVDTGFDMNYVWKIMLSFLDSIMSFSGFQLSPIRD 1443
ER SLEQP CPK LGD+VES VGAVLVDTGFDMNYVWKIMLSFLD IMS SGFQLSPIRD
Sbjct: 1331 ERDSLEQPRCPKPLGDLVESSVGAVLVDTGFDMNYVWKIMLSFLDPIMSSSGFQLSPIRD 1390
Query: 1444 ITEFCQDCGWKLQFNATKVEKYFSVKAEVKGNNFHETASAANRRKKDAEKIAANLILSKL 1503
I E CQ+CGWKLQFN +K+EKY+SV+AEVKG++FH TASA NRRKKDAEKIAAN IL+KL
Sbjct: 1391 IIEVCQNCGWKLQFNPSKMEKYYSVEAEVKGDDFHATASAVNRRKKDAEKIAANSILTKL 1450
Query: 1504 KEKGFIPEVSSLEEILRSRKKMEPELIGFDETPSVSIDQADNGSGTIPGSEHSGAELDPC 1563
K +GFIPEV+SLE+IL+S +KM+P+LIG+DETPSV++DQ D+ G E SGA+LDP
Sbjct: 1451 KAQGFIPEVNSLEKILKSSEKMKPKLIGYDETPSVTMDQIDD------GLEFSGADLDPR 1510
Query: 1564 VNSEFSNSHSVRITRLSEAPEFSSVAAEEELKP---------------STFGGTNLQSSS 1623
V+ E NSH RITR+SE SS AA E+LKP S+ ++ SSS
Sbjct: 1511 VHHEVGNSHPFRITRMSETLASSSGAAGEQLKPSIPLEGHDSSTDLLSSSSSSSSSSSSS 1570
Query: 1624 GRSSKTTARSRLYEICAANHWNQPSFDCMNEEGPGHLKMFTYKVVLEIEEAPDTIFEFFG 1683
GRS KTTARSRL+E+CA NHWN PSF+CMNEEGP HLKMFTYKVVLEIEEAPDTIFEFFG
Sbjct: 1571 GRSGKTTARSRLHEVCAINHWNHPSFNCMNEEGPSHLKMFTYKVVLEIEEAPDTIFEFFG 1630
Query: 1684 ASHSRKKAAAEHAAEAALWYLKKEGYWNETD 1696
A H KKAAAEHAAEAALWYLKKE Y +TD
Sbjct: 1631 APHLTKKAAAEHAAEAALWYLKKERYLGDTD 1653
BLAST of Sed0002244 vs. TAIR 10
Match:
AT5G20320.1 (dicer-like 4 )
HSP 1 Score: 1640.6 bits (4247), Expect = 0.0e+00
Identity = 863/1620 (53.27%), Postives = 1126/1620 (69.51%), Query Frame = 0
Query: 84 SLVGDPGAGSSSRASEKDPRRVARKYQLELCKKALEENIIVYLGTGCGKTHIAILLIYEM 143
SL G S EKDPR++AR+YQ+ELCKKA EEN+IVYLGTGCGKTHIA++LIYE+
Sbjct: 102 SLFSAAGTDDPSPKMEKDPRKIARRYQVELCKKATEENVIVYLGTGCGKTHIAVMLIYEL 161
Query: 144 RNLIRRSQKGICVFLAPTVALVQQQAKVIEDSIDFKVRVYCGGFKGLNSHYDWEREMEEH 203
+L+ +K +C+FLAPTVALV+QQAKVI DS++FKV ++CGG + + SH +WERE+ +
Sbjct: 162 GHLVLSPKKSVCIFLAPTVALVEQQAKVIADSVNFKVAIHCGGKRIVKSHSEWEREIAAN 221
Query: 204 EVFVMTPQTLLRSLNHCYIKMEFVELLIFDECHHAQVKSDHSYAQIMKVFYKGSVAKRPR 263
EV VMTPQ LL +L HC+IKME + LLIFDECHHAQ +S+H YA+IMKVFYK +RPR
Sbjct: 222 EVLVMTPQILLHNLQHCFIKMECISLLIFDECHHAQQQSNHPYAEIMKVFYKSESLQRPR 281
Query: 264 IFGMTASPVVGKGTCNQQSLSKSINSLEKLLDAKVYSVEDREDLEAFVSSPLVKIYYYGP 323
IFGMTASPVVGKG+ ++LSKSINSLE LL+AKVYSVE L+ FVSSPLVK+YYY
Sbjct: 282 IFGMTASPVVGKGSFQSENLSKSINSLENLLNAKVYSVESNVQLDGFVSSPLVKVYYYRS 341
Query: 324 VANGSSSSFMTYCCQLEEVKRQCVVALGQMKGEH--EGLLATKKLLLRMHDNIIFCLENL 383
+ +S S + Y LE++K++C+ +L + H + LL+ K+LL R HDN+I+ L NL
Sbjct: 342 ALSDASQSTIRYENMLEDIKQRCLASLKLLIDTHQTQTLLSMKRLLKRSHDNLIYTLLNL 401
Query: 384 GVWGALQASKILLSGDNSERSELIEAAEGNPNNDSLSDRYLNQAAEILASGCKIDGGMPD 443
G+WGA+QA+KI L+ D++ + E + G + D YL+ AAE L+SG D D
Sbjct: 402 GLWGAIQAAKIQLNSDHNVQDEPV----GKNPKSKICDTYLSMAAEALSSGVAKDENASD 461
Query: 444 MLNVDILEDPFFSKKLLRLIGILSSFGHRLNMKCIIFVNRIVIARSLSYILQNLKFLAYW 503
+L++ L++P FS+KL++LI ILS F +MKCIIFVNRIV AR+LS IL NL+ L W
Sbjct: 462 LLSLAALKEPLFSRKLVQLIKILSVFRLEPHMKCIIFVNRIVTARTLSCILNNLELLRSW 521
Query: 504 KCDFLVGVHSKLRSMSRKTMNRILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPE 563
K DFLVG+ S L+SMSR++M IL +F+S ELNLL+ATKVGEEGLDIQTCCLVIR+DLPE
Sbjct: 522 KSDFLVGLSSGLKSMSRRSMETILKRFQSKELNLLVATKVGEEGLDIQTCCLVIRYDLPE 581
Query: 564 TVSSFIQSRGRARMPQSEYAFIVDRGNEKERGLIDGFQKDENHMNREISSRSSNETFQSH 623
TV+SFIQSRGRARMPQSEYAF+VD GNEKE LI+ F+ +E+ MN EI+ RSS ET
Sbjct: 582 TVTSFIQSRGRARMPQSEYAFLVDSGNEKEMDLIENFKVNEDRMNLEITYRSSEETCPRL 641
Query: 624 EESIYRVVSTGASVTSGLSISLLHEYCSKLPHDEYFDPKPKFFY--YDDLEGTICHAILP 683
+E +Y+V TGA ++ G SISLL++YCS+LPHDE+F PKP+F + D+ GTIC LP
Sbjct: 642 DEELYKVHETGACISGGSSISLLYKYCSRLPHDEFFQPKPEFQFKPVDEFGGTICRITLP 701
Query: 684 SNAPIPQVVSRVQFSRDAAKKDACLKAIEELHKLGAFNDFLLPMRDNAIEEELELASCDS 743
+NAPI ++ S + S +AAKKDACLKA+ ELH LG NDFLLP + IE+EL D
Sbjct: 702 ANAPISEIESSLLPSTEAAKKDACLKAVHELHNLGVLNDFLLPDSKDEIEDELSDDEFDF 761
Query: 744 DSSEDE-TSRRELHEMLVPTALKDSWTGSGNVI-LNCYQIKISPHPGDRIYKEFGLFVKA 803
D+ + E SR +L+EM VP K W S + + L+ Y I PHP DRIYK+FG F+K+
Sbjct: 762 DNIKGEGCSRGDLYEMRVPVLFKQKWDPSTSCVNLHSYYIMFVPHPADRIYKKFGFFMKS 821
Query: 804 PLPQEAERIDLELHLARSRYVKVNLVPSGVVELLEDEITQAESFQEMFLKVILDRSEFVQ 863
PLP EAE +D++LHLA R V V + PSGV E DEI AE FQE+ LKV+ +R E +
Sbjct: 822 PLPVEAETMDIDLHLAHQRSVSVKIFPSGVTEFDNDEIRLAELFQEIALKVLFERGELIP 881
Query: 864 DYVPLR-NNVSGSISSASYLLLPMIFQDNEGSSLIDWKVIRRCLSSQIFQNHACSAVRET 923
D+VPL + S + S YLLLP+ D E +DW IR CLSS IF+ +
Sbjct: 882 DFVPLELQDSSRTSKSTFYLLLPLCLHDGESVISVDWVTIRNCLSSPIFKTPSVLVEDIF 941
Query: 924 ASSDTHLTLYDGRRRLCDIENSLVYVPYKREFFFVTHIVRSKNGYSRYKNSGSLSHFEHL 983
S +HL L +G + D++NSLV+ Y ++F+FV I +NG+S K S + SH E +
Sbjct: 942 PPSGSHLKLANGCWNIDDVKNSLVFTTYSKQFYFVADICHGRNGFSPVKESSTKSHVESI 1001
Query: 984 LERFDIHLKYPEQPLLCAKPLFHLHNLLHDRRLNDSEACDLIEHLIDLPPELCQLKITGF 1043
+ + + LK+P QPLL KPL H+ NLLH+R + E +L E+ I++PPEL LKI G
Sbjct: 1002 YKLYGVELKHPAQPLLRVKPLCHVRNLLHNRMQTNLEPQELDEYFIEIPPELSHLKIKGL 1061
Query: 1044 TKDIGSSISLLPSFMHHLENFLVAIELKCTLAAAFPAASEVTSNRILEALTTEKCQERIS 1103
+KDIGSS+SLLPS MH +EN LVAIELK L+A+ P +EV+ +R+LEALTTEKC ER+S
Sbjct: 1062 SKDIGSSLSLLPSIMHRMENLLVAIELKHVLSASIPEIAEVSGHRVLEALTTEKCHERLS 1121
Query: 1104 LERLEILGDAFLKFAVARHLFLTHDKFDEGELTRRRSYLVKNINLFKLATRKNLQVYIRD 1163
LERLE+LGDAFLKFAV+RHLFL HD DEGELTRRRS +V N NL +LA +KNLQVYIRD
Sbjct: 1122 LERLEVLGDAFLKFAVSRHLFLHHDSLDEGELTRRRSNVVNNSNLCRLAIKKNLQVYIRD 1181
Query: 1164 QPFEPNQFYSLGRPCPRICNEETRKDIHSHKNAKG------GETKCSKGHHWLHKKTISD 1223
Q +P QF++ G PC C+E K++HS G GE +CSKGHHWL+KKTI+D
Sbjct: 1182 QALDPTQFFAFGHPCRVTCDEVASKEVHSLNRDLGILESNTGEIRCSKGHHWLYKKTIAD 1241
Query: 1224 VVEALVGAFLVDSGFKAAIAFLKWIGIQVEFEASQVTDARMASNAYLRLADCISISALQD 1283
VVEALVGAFLVDSGFK A+ FLKWIG+ V+FE+ QV DA +AS YL L ++ L++
Sbjct: 1242 VVEALVGAFLVDSGFKGAVKFLKWIGVNVDFESLQVQDACIASRRYLPLTTRNNLETLEN 1301
Query: 1284 SLGHQFLYKGLLLQALIHPSYHRHGGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGLV 1343
L ++FL+KGLL+QA IHPSY+RHGGGCYQRLEFLGDAVLDYL+TSY ++V+PKLKPG +
Sbjct: 1302 QLDYKFLHKGLLVQAFIHPSYNRHGGGCYQRLEFLGDAVLDYLMTSYFFTVFPKLKPGQL 1361
Query: 1344 TDLRSVFVMNEAFANISVDRFFYKFLICDSTSLQKDIKSYVNFIKSPPSERGSLEQPTCP 1403
TDLRS+ V NEA AN++V +FL C+S L + I+ Y NF+ S P G E P CP
Sbjct: 1362 TDLRSLSVNNEALANVAVSFSLKRFLFCESIYLHEVIEDYTNFLASSPLASGQSEGPRCP 1421
Query: 1404 KVLGDMVESIVGAVLVDTGFDMNYVWKIMLSFLDSIMSFSGFQLSPIRDITEFCQDCGWK 1463
KVLGD+VES +GA+ +D GF++N+VW +MLSFLD + + S Q+SPI+++ E CQ W
Sbjct: 1422 KVLGDLVESCLGALFLDCGFNLNHVWTMMLSFLDPVKNLSNLQISPIKELIELCQSYKWD 1481
Query: 1464 LQFNATKVEKYFSVKAEVKGNNFHETASAANRRKKDAEKIAANLILSKLKEKGFIPEVSS 1523
+ +ATK + F+V+ +V N T SA R K++ K AA L+++ LK I
Sbjct: 1482 REISATKKDGAFTVELKVTKNGCCLTVSATGRNKREGTKKAAQLMITNLKAHENITTSHP 1541
Query: 1524 LEEILRSRKKMEPELIGFDETPSVSIDQADNGSGTIPGSEHSGAELDPCVNSEFSNSHSV 1583
LE++L++ + E +LIG++E P +D + E G NSE S+S+ +
Sbjct: 1542 LEDVLKNGIRNEAKLIGYNEDPIDVVDLVGLDVENLNILETFGG------NSERSSSYVI 1601
Query: 1584 RITRLSEAPEFSSVAAEEELKPSTFGGTNLQSSSGRSSKTTARSRLYEICAANHWNQPSF 1643
R L +AP E+ L + + G SSK TA+S L+E C AN W P F
Sbjct: 1602 R-RGLPQAPS----KTEDRLPQKA-----IIKAGGPSSK-TAKSLLHETCVANCWKPPHF 1661
Query: 1644 DCMNEEGPGHLKMFTYKVVLEIEEAPDTIFEFFGASHSRKKAAAEHAAEAALWYLKKEGY 1691
+C EEGPGHLK F YKV+LE+E+AP+ E +G + + KK AAEHAA+AA+W LK G+
Sbjct: 1662 ECCEEEGPGHLKSFVYKVILEVEDAPNMTLECYGEARATKKGAAEHAAQAAIWCLKHSGF 1700
BLAST of Sed0002244 vs. TAIR 10
Match:
AT5G20320.2 (dicer-like 4 )
HSP 1 Score: 1614.0 bits (4178), Expect = 0.0e+00
Identity = 854/1620 (52.72%), Postives = 1116/1620 (68.89%), Query Frame = 0
Query: 84 SLVGDPGAGSSSRASEKDPRRVARKYQLELCKKALEENIIVYLGTGCGKTHIAILLIYEM 143
SL G S EKDPR++AR+YQ+ELCKKA EEN+IVYLGTGCGKTHIA++LIYE+
Sbjct: 102 SLFSAAGTDDPSPKMEKDPRKIARRYQVELCKKATEENVIVYLGTGCGKTHIAVMLIYEL 161
Query: 144 RNLIRRSQKGICVFLAPTVALVQQQAKVIEDSIDFKVRVYCGGFKGLNSHYDWEREMEEH 203
+L+ +K +C+FLAPTVALV+QQAKVI DS++FKV ++CGG + + SH +WERE+ +
Sbjct: 162 GHLVLSPKKSVCIFLAPTVALVEQQAKVIADSVNFKVAIHCGGKRIVKSHSEWEREIAAN 221
Query: 204 EVFVMTPQTLLRSLNHCYIKMEFVELLIFDECHHAQVKSDHSYAQIMKVFYKGSVAKRPR 263
E HC+IKME + LLIFDECHHAQ +S+H YA+IMKVFYK +RPR
Sbjct: 222 E--------------HCFIKMECISLLIFDECHHAQQQSNHPYAEIMKVFYKSESLQRPR 281
Query: 264 IFGMTASPVVGKGTCNQQSLSKSINSLEKLLDAKVYSVEDREDLEAFVSSPLVKIYYYGP 323
IFGMTASPVVGKG+ ++LSKSINSLE LL+AKVYSVE L+ FVSSPLVK+YYY
Sbjct: 282 IFGMTASPVVGKGSFQSENLSKSINSLENLLNAKVYSVESNVQLDGFVSSPLVKVYYYRS 341
Query: 324 VANGSSSSFMTYCCQLEEVKRQCVVALGQMKGEH--EGLLATKKLLLRMHDNIIFCLENL 383
+ +S S + Y LE++K++C+ +L + H + LL+ K+LL R HDN+I+ L NL
Sbjct: 342 ALSDASQSTIRYENMLEDIKQRCLASLKLLIDTHQTQTLLSMKRLLKRSHDNLIYTLLNL 401
Query: 384 GVWGALQASKILLSGDNSERSELIEAAEGNPNNDSLSDRYLNQAAEILASGCKIDGGMPD 443
G+WGA+QA+KI L+ D++ + E + G + D YL+ AAE L+SG D D
Sbjct: 402 GLWGAIQAAKIQLNSDHNVQDEPV----GKNPKSKICDTYLSMAAEALSSGVAKDENASD 461
Query: 444 MLNVDILEDPFFSKKLLRLIGILSSFGHRLNMKCIIFVNRIVIARSLSYILQNLKFLAYW 503
+L++ L++P FS+KL++LI ILS F +MKCIIFVNRIV AR+LS IL NL+ L W
Sbjct: 462 LLSLAALKEPLFSRKLVQLIKILSVFRLEPHMKCIIFVNRIVTARTLSCILNNLELLRSW 521
Query: 504 KCDFLVGVHSKLRSMSRKTMNRILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPE 563
K DFLVG+ S L+SMSR++M IL +F+S ELNLL+ATKVGEEGLDIQTCCLVIR+DLPE
Sbjct: 522 KSDFLVGLSSGLKSMSRRSMETILKRFQSKELNLLVATKVGEEGLDIQTCCLVIRYDLPE 581
Query: 564 TVSSFIQSRGRARMPQSEYAFIVDRGNEKERGLIDGFQKDENHMNREISSRSSNETFQSH 623
TV+SFIQSRGRARMPQSEYAF+VD GNEKE LI+ F+ +E+ MN EI+ RSS ET
Sbjct: 582 TVTSFIQSRGRARMPQSEYAFLVDSGNEKEMDLIENFKVNEDRMNLEITYRSSEETCPRL 641
Query: 624 EESIYRVVSTGASVTSGLSISLLHEYCSKLPHDEYFDPKPKFFY--YDDLEGTICHAILP 683
+E +Y+V TGA ++ G SISLL++YCS+LPHDE+F PKP+F + D+ GTIC LP
Sbjct: 642 DEELYKVHETGACISGGSSISLLYKYCSRLPHDEFFQPKPEFQFKPVDEFGGTICRITLP 701
Query: 684 SNAPIPQVVSRVQFSRDAAKKDACLKAIEELHKLGAFNDFLLPMRDNAIEEELELASCDS 743
+NAPI ++ S + S +AAKKDACLKA+ ELH LG NDFLLP + IE+EL D
Sbjct: 702 ANAPISEIESSLLPSTEAAKKDACLKAVHELHNLGVLNDFLLPDSKDEIEDELSDDEFDF 761
Query: 744 DSSEDE-TSRRELHEMLVPTALKDSWTGSGNVI-LNCYQIKISPHPGDRIYKEFGLFVKA 803
D+ + E SR +L+EM VP K W S + + L+ Y I PHP DRIYK+FG F+K+
Sbjct: 762 DNIKGEGCSRGDLYEMRVPVLFKQKWDPSTSCVNLHSYYIMFVPHPADRIYKKFGFFMKS 821
Query: 804 PLPQEAERIDLELHLARSRYVKVNLVPSGVVELLEDEITQAESFQEMFLKVILDRSEFVQ 863
PLP EAE +D++LHLA R V V + PSGV E DEI AE FQE+ LKV+ +R E +
Sbjct: 822 PLPVEAETMDIDLHLAHQRSVSVKIFPSGVTEFDNDEIRLAELFQEIALKVLFERGELIP 881
Query: 864 DYVPLR-NNVSGSISSASYLLLPMIFQDNEGSSLIDWKVIRRCLSSQIFQNHACSAVRET 923
D+VPL + S + S YLLLP+ D E +DW IR CLSS IF+ +
Sbjct: 882 DFVPLELQDSSRTSKSTFYLLLPLCLHDGESVISVDWVTIRNCLSSPIFKTPSVLVEDIF 941
Query: 924 ASSDTHLTLYDGRRRLCDIENSLVYVPYKREFFFVTHIVRSKNGYSRYKNSGSLSHFEHL 983
S +HL L +G + D++NSLV+ Y ++F+FV I +NG+S K S + SH E +
Sbjct: 942 PPSGSHLKLANGCWNIDDVKNSLVFTTYSKQFYFVADICHGRNGFSPVKESSTKSHVESI 1001
Query: 984 LERFDIHLKYPEQPLLCAKPLFHLHNLLHDRRLNDSEACDLIEHLIDLPPELCQLKITGF 1043
+ + + LK+P QPLL KPL H+ NLLH+R + E +L E+ I++PPEL LKI G
Sbjct: 1002 YKLYGVELKHPAQPLLRVKPLCHVRNLLHNRMQTNLEPQELDEYFIEIPPELSHLKIKGL 1061
Query: 1044 TKDIGSSISLLPSFMHHLENFLVAIELKCTLAAAFPAASEVTSNRILEALTTEKCQERIS 1103
+KDIGSS+SLLPS MH +EN LVAIELK L+A+ P +EV+ +R+LEALTTEKC ER+S
Sbjct: 1062 SKDIGSSLSLLPSIMHRMENLLVAIELKHVLSASIPEIAEVSGHRVLEALTTEKCHERLS 1121
Query: 1104 LERLEILGDAFLKFAVARHLFLTHDKFDEGELTRRRSYLVKNINLFKLATRKNLQVYIRD 1163
LERLE+LGDAFLKFAV+RHLFL HD DEGELTRRRS +V N NL +LA +KNLQVYIRD
Sbjct: 1122 LERLEVLGDAFLKFAVSRHLFLHHDSLDEGELTRRRSNVVNNSNLCRLAIKKNLQVYIRD 1181
Query: 1164 QPFEPNQFYSLGRPCPRICNEETRKDIHSHKNAKG------GETKCSKGHHWLHKKTISD 1223
Q +P QF++ G PC C+E K++HS G GE +CSKGHHWL+KKTI+D
Sbjct: 1182 QALDPTQFFAFGHPCRVTCDEVASKEVHSLNRDLGILESNTGEIRCSKGHHWLYKKTIAD 1241
Query: 1224 VVEALVGAFLVDSGFKAAIAFLKWIGIQVEFEASQVTDARMASNAYLRLADCISISALQD 1283
VVEALVGAFLVDSGFK A+ FLKWIG+ V+FE+ QV DA +AS YL L ++ L++
Sbjct: 1242 VVEALVGAFLVDSGFKGAVKFLKWIGVNVDFESLQVQDACIASRRYLPLTTRNNLETLEN 1301
Query: 1284 SLGHQFLYKGLLLQALIHPSYHRHGGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGLV 1343
L ++FL+KGLL+QA IHPSY+RHGGGCYQRLEFLGDAVLDYL+TSY ++V+PKLKPG +
Sbjct: 1302 QLDYKFLHKGLLVQAFIHPSYNRHGGGCYQRLEFLGDAVLDYLMTSYFFTVFPKLKPGQL 1361
Query: 1344 TDLRSVFVMNEAFANISVDRFFYKFLICDSTSLQKDIKSYVNFIKSPPSERGSLEQPTCP 1403
TDLRS+ V NEA AN++V +FL C+S L + I+ Y NF+ S P G E P CP
Sbjct: 1362 TDLRSLSVNNEALANVAVSFSLKRFLFCESIYLHEVIEDYTNFLASSPLASGQSEGPRCP 1421
Query: 1404 KVLGDMVESIVGAVLVDTGFDMNYVWKIMLSFLDSIMSFSGFQLSPIRDITEFCQDCGWK 1463
KVLGD+VES +GA+ +D GF++N+VW +MLSFLD + + S Q+SPI+++ E CQ W
Sbjct: 1422 KVLGDLVESCLGALFLDCGFNLNHVWTMMLSFLDPVKNLSNLQISPIKELIELCQSYKWD 1481
Query: 1464 LQFNATKVEKYFSVKAEVKGNNFHETASAANRRKKDAEKIAANLILSKLKEKGFIPEVSS 1523
+ +ATK + F+V+ +V N T SA R K++ K AA L+++ LK I
Sbjct: 1482 REISATKKDGAFTVELKVTKNGCCLTVSATGRNKREGTKKAAQLMITNLKAHENITTSHP 1541
Query: 1524 LEEILRSRKKMEPELIGFDETPSVSIDQADNGSGTIPGSEHSGAELDPCVNSEFSNSHSV 1583
LE++L++ + E +LIG++E P +D + E G NSE S+S+ +
Sbjct: 1542 LEDVLKNGIRNEAKLIGYNEDPIDVVDLVGLDVENLNILETFGG------NSERSSSYVI 1601
Query: 1584 RITRLSEAPEFSSVAAEEELKPSTFGGTNLQSSSGRSSKTTARSRLYEICAANHWNQPSF 1643
R L +AP E+ L + + G SSK TA+S L+E C AN W P F
Sbjct: 1602 R-RGLPQAPS----KTEDRLPQKA-----IIKAGGPSSK-TAKSLLHETCVANCWKPPHF 1661
Query: 1644 DCMNEEGPGHLKMFTYKVVLEIEEAPDTIFEFFGASHSRKKAAAEHAAEAALWYLKKEGY 1691
+C EEGPGHLK F YKV+LE+E+AP+ E +G + + KK AAEHAA+AA+W LK G+
Sbjct: 1662 ECCEEEGPGHLKSFVYKVILEVEDAPNMTLECYGEARATKKGAAEHAAQAAIWCLKHSGF 1686
BLAST of Sed0002244 vs. TAIR 10
Match:
AT3G03300.1 (dicer-like 2 )
HSP 1 Score: 664.1 bits (1712), Expect = 3.1e-190
Identity = 469/1430 (32.80%), Postives = 759/1430 (53.08%), Query Frame = 0
Query: 102 PRRVARKYQLELCKKALEENIIVYLGTGCGKTHIAILLIYEMRNLIRRSQKGICVFLAPT 161
P AR YQ+E +KA+++N IV+L TG GKT IAI+L+ L R+ CVFL P
Sbjct: 20 PLHFARSYQVEALEKAIKQNTIVFLETGSGKTLIAIMLLRSYAYLFRKPSPCFCVFLVPQ 79
Query: 162 VALVQQQAKVIEDSIDFKVRVYCGGFKGLN--SHYDWEREMEEHEVFVMTPQTLLRSLNH 221
V LV QQA+ ++ D KV +Y G G++ W++E++++EV VMTP LL +L H
Sbjct: 80 VVLVTQQAEALKMHTDLKVGMYWGDM-GVDFWDSSTWKQEVDKYEVLVMTPAILLDALRH 139
Query: 222 CYIKMEFVELLIFDECHHAQVKSDHSYAQIMKVFY----KGSVAKRPRIFGMTASPVVGK 281
++ + +++LI DECHHA K H YA IM+ FY + PRIFGMTAS V K
Sbjct: 140 SFLSLSMIKVLIVDECHHAGGK--HPYACIMREFYHKELNSGTSNVPRIFGMTASLVKTK 199
Query: 282 GTCNQQSLSKSINSLEKLLDAKVYSVEDREDLEAFV--SSPLVKIYYYGPVANGSSSSFM 341
G N S K I+ LE L+++KVY+ E+ L FV S+P K Y + + + +S +
Sbjct: 200 GE-NLDSYWKKIHELETLMNSKVYTCENESVLAGFVPFSTPSFKYYQHIKIPSPKRASLV 259
Query: 342 TYCCQLEEVKRQCVVALGQMKGEHEGLLATKKLLLRMHDNIIFCLENLGVWGALQASKIL 401
+LE + + ++LG + + + +K LLR+ + +CL++LG+ A +A++ L
Sbjct: 260 E---KLERLTIKHRLSLGTLDLNSSTVDSVEKRLLRISSTLTYCLDDLGILLAQKAAQSL 319
Query: 402 LSGDNSERSELIEAAEGNPNNDSLSDRYLNQAA-EILASGCKIDGGMPDMLNVDI----- 461
+ N + E N + +L ++ + A+ E LA +P LN +
Sbjct: 320 SASQN----DSFLWGELNMFSVALVKKFCSDASQEFLAE-------IPQGLNWSVANING 379
Query: 462 -LEDPFFSKKLLRLIGILSSFGHRLNMKCIIFVNRIVIARSL-SYILQNLKFLAYWKCDF 521
E + K + LI L + N++CIIFV+R++ A L S + + L WK +
Sbjct: 380 NAEAGLLTLKTVCLIETLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKTKY 439
Query: 522 LVGVHSKLRSMSRKTMNRILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPETVSS 581
+ G +S L++ +RK N I+ FR G +N+++AT + EEGLD+Q+C LVIRFD + S
Sbjct: 440 VAGNNSGLQNQTRKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICS 499
Query: 582 FIQSRGRARMPQSEYAFIVDRGNEKERGLIDGFQKDENHMNREISSRS---SNETFQSHE 641
FIQSRGRARM S+Y +V+ G+ + + + M E S +
Sbjct: 500 FIQSRGRARMQNSDYLMMVESGDLLTQSRLMKYLSGGKRMREESLDHSLVPCPPLPDDSD 559
Query: 642 ESIYRVVSTGASVTSGLSISLLHEYCSKLPHDEYFDPKPKFFYYDDLEGTICHAILPSNA 701
E ++RV STGA+VT S+SL++ YCS+LP DEYF P P+F D +G+ C LP +
Sbjct: 560 EPLFRVESTGATVTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKD-QGS-CTLYLPKSC 619
Query: 702 PIPQVVSRVQFSRDAAKKDACLKAIEELHKLGAFNDFLLPMRDNAIEEELELASCDSDSS 761
P+ +V + + + K+ CLKA +LHK+GA +D L+P ++ +A S
Sbjct: 620 PVKEV--KAEANNKVLKQAVCLKACIQLHKVGALSDHLVP--------DMVVAETVSQKL 679
Query: 762 EDETSRRELHEMLVPTALKDSWTGSGNVILNCYQIKISPH-PGDRIYKEFGLFVKAPLPQ 821
E E P L ++ + Y I++ P+ P + + L + L
Sbjct: 680 EKIQYNTE-QPCYFPPELVSQFSAQPETTYHFYLIRMKPNSPRNFHLNDVLLGTRVVLED 739
Query: 822 EAERIDLELHLARSRYVKVNLVPSGVVELLEDEITQAESFQEMFLKVILDRSEFVQDYVP 881
+ L R + V L G L ++E+ FQ +V+LD S V++ +
Sbjct: 740 DIGNTSFRLEDHRGT-IAVTLSYVGAFHLTQEEVLFCRRFQITLFRVLLDHS--VENLME 799
Query: 882 LRNNVSGSISSA-SYLLLPMIFQDNEGSSLIDWKVIR--RCLSSQIFQNHA-CSAVRETA 941
N + A YLL+P + +SLIDW+VIR S ++ + H CS T
Sbjct: 800 ALNGLHLRDGVALDYLLVPS--THSHETSLIDWEVIRSVNLTSHEVLEKHENCS----TN 859
Query: 942 SSDTHLTLYDGRRRLCDIENSLVYVPYKREFFFVTHIVRSKNGYS--RYKNSGSLSHFEH 1001
+ L DG C ++N+LVY P+ + ++ + NG S +NSG ++ E+
Sbjct: 860 GASRILHTKDGLFCTCVVQNALVYTPHNGYVYCTKGVLNNLNGNSLLTKRNSGDQTYIEY 919
Query: 1002 LLERFDIHLKYPEQPLLCAKPLFHLHNLLHDRRLNDSEACDLIEHLIDLPPELCQLKITG 1061
ER I L + ++PLL + +F LH+ LH + + D ++LPPELC + ++
Sbjct: 920 YEERHGIQLNFVDEPLLNGRHIFTLHSYLHMAKKKKEKEHD--REFVELPPELCHVILSP 979
Query: 1062 FTKDIGSSISLLPSFMHHLENFLVAIELKCTLAAAFPAASEVTSNRILEALTTEKCQERI 1121
+ D+ S + +PS M +E+ L+A LK ++ + + ++LEA+TT+KC+++
Sbjct: 980 ISVDMIYSYTFIPSVMQRIESLLIAYNLKKSIPKV-----NIPTIKVLEAITTKKCEDQF 1039
Query: 1122 SLERLEILGDAFLKFAVARHLFLTHDKFDEGELTRRRSYLVKNINLFKLATRKNLQVYIR 1181
LE LE LGD+FLK+AV + LF EG L+ ++ ++ N+ L + ++ LQ +IR
Sbjct: 1040 HLESLETLGDSFLKYAVCQQLFQHCHTHHEGLLSTKKDGMISNVMLCQFGCQQKLQGFIR 1099
Query: 1182 DQPFEPNQFYSLGRPCP--RICNEETRKDIHSHKNAKGGETKCSKGHHWLHKKTISDVVE 1241
D+ FEP + G+ + N+ + + + ++ L +K+++DVVE
Sbjct: 1100 DECFEPKGWMVPGQSSAAYSLVNDTLPESRNIYVASRRN----------LKRKSVADVVE 1159
Query: 1242 ALVGAFLVDSGFKAAIAFLKWIGIQVEFEASQVTDARMASNAYLRLADCISISALQDSLG 1301
+L+GA+L + G AA+ F+ W+GI+V+F T ++ ++ ++ +++ ++ L
Sbjct: 1160 SLIGAYLSEGGELAALMFMNWVGIKVDF-----TTTKIQRDSPIQAEKLVNVGYMESLLN 1219
Query: 1302 HQFLYKGLLLQALIHPSYHR-HGGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGLVTD 1361
+ F K LL++AL H SY CYQRLEFLGD+VLDYLIT +LY YP L PGL+TD
Sbjct: 1220 YSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLGDSVLDYLITKHLYDKYPCLSPGLLTD 1279
Query: 1362 LRSVFVMNEAFANISVDRFFYKFLICDSTSLQKDIKSYVNFIK--SPPSERGSLEQPTCP 1421
+RS V NE +A ++V +K ++ S L K I V+ + S S G + P
Sbjct: 1280 MRSASVNNECYALVAVKANLHKHILYASHHLHKHISRTVSEFEQSSLQSTFGWESDISFP 1339
Query: 1422 KVLGDMVESIVGAVLVDTGFDMNYVWKIMLSFLDSIMSFSGFQLSPIRDITEFCQDCGWK 1481
KVLGD++ES+ GA+ VD+G++ V+ + L +++ +L P+R++TE CQ W+
Sbjct: 1340 KVLGDVIESLAGAIFVDSGYNKEVVFASIKPLLGCMITPETVKLHPVRELTELCQK--WQ 1383
Query: 1482 LQFNATKVEKYFSVKAEVKGNNFHETASAANRRKKDAEKIAANLILSKLK 1501
+ + K F+V+ + K +F TA A++ KK A+K+A +L+ LK
Sbjct: 1400 FELSKAKDFDSFTVEVKAKEMSFAHTAKASD--KKMAKKLAYKEVLNLLK 1383
BLAST of Sed0002244 vs. TAIR 10
Match:
AT3G03300.3 (dicer-like 2 )
HSP 1 Score: 664.1 bits (1712), Expect = 3.1e-190
Identity = 469/1430 (32.80%), Postives = 759/1430 (53.08%), Query Frame = 0
Query: 102 PRRVARKYQLELCKKALEENIIVYLGTGCGKTHIAILLIYEMRNLIRRSQKGICVFLAPT 161
P AR YQ+E +KA+++N IV+L TG GKT IAI+L+ L R+ CVFL P
Sbjct: 20 PLHFARSYQVEALEKAIKQNTIVFLETGSGKTLIAIMLLRSYAYLFRKPSPCFCVFLVPQ 79
Query: 162 VALVQQQAKVIEDSIDFKVRVYCGGFKGLN--SHYDWEREMEEHEVFVMTPQTLLRSLNH 221
V LV QQA+ ++ D KV +Y G G++ W++E++++EV VMTP LL +L H
Sbjct: 80 VVLVTQQAEALKMHTDLKVGMYWGDM-GVDFWDSSTWKQEVDKYEVLVMTPAILLDALRH 139
Query: 222 CYIKMEFVELLIFDECHHAQVKSDHSYAQIMKVFY----KGSVAKRPRIFGMTASPVVGK 281
++ + +++LI DECHHA K H YA IM+ FY + PRIFGMTAS V K
Sbjct: 140 SFLSLSMIKVLIVDECHHAGGK--HPYACIMREFYHKELNSGTSNVPRIFGMTASLVKTK 199
Query: 282 GTCNQQSLSKSINSLEKLLDAKVYSVEDREDLEAFV--SSPLVKIYYYGPVANGSSSSFM 341
G N S K I+ LE L+++KVY+ E+ L FV S+P K Y + + + +S +
Sbjct: 200 GE-NLDSYWKKIHELETLMNSKVYTCENESVLAGFVPFSTPSFKYYQHIKIPSPKRASLV 259
Query: 342 TYCCQLEEVKRQCVVALGQMKGEHEGLLATKKLLLRMHDNIIFCLENLGVWGALQASKIL 401
+LE + + ++LG + + + +K LLR+ + +CL++LG+ A +A++ L
Sbjct: 260 E---KLERLTIKHRLSLGTLDLNSSTVDSVEKRLLRISSTLTYCLDDLGILLAQKAAQSL 319
Query: 402 LSGDNSERSELIEAAEGNPNNDSLSDRYLNQAA-EILASGCKIDGGMPDMLNVDI----- 461
+ N + E N + +L ++ + A+ E LA +P LN +
Sbjct: 320 SASQN----DSFLWGELNMFSVALVKKFCSDASQEFLAE-------IPQGLNWSVANING 379
Query: 462 -LEDPFFSKKLLRLIGILSSFGHRLNMKCIIFVNRIVIARSL-SYILQNLKFLAYWKCDF 521
E + K + LI L + N++CIIFV+R++ A L S + + L WK +
Sbjct: 380 NAEAGLLTLKTVCLIETLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKTKY 439
Query: 522 LVGVHSKLRSMSRKTMNRILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPETVSS 581
+ G +S L++ +RK N I+ FR G +N+++AT + EEGLD+Q+C LVIRFD + S
Sbjct: 440 VAGNNSGLQNQTRKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICS 499
Query: 582 FIQSRGRARMPQSEYAFIVDRGNEKERGLIDGFQKDENHMNREISSRS---SNETFQSHE 641
FIQSRGRARM S+Y +V+ G+ + + + M E S +
Sbjct: 500 FIQSRGRARMQNSDYLMMVESGDLLTQSRLMKYLSGGKRMREESLDHSLVPCPPLPDDSD 559
Query: 642 ESIYRVVSTGASVTSGLSISLLHEYCSKLPHDEYFDPKPKFFYYDDLEGTICHAILPSNA 701
E ++RV STGA+VT S+SL++ YCS+LP DEYF P P+F D +G+ C LP +
Sbjct: 560 EPLFRVESTGATVTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKD-QGS-CTLYLPKSC 619
Query: 702 PIPQVVSRVQFSRDAAKKDACLKAIEELHKLGAFNDFLLPMRDNAIEEELELASCDSDSS 761
P+ +V + + + K+ CLKA +LHK+GA +D L+P ++ +A S
Sbjct: 620 PVKEV--KAEANNKVLKQAVCLKACIQLHKVGALSDHLVP--------DMVVAETVSQKL 679
Query: 762 EDETSRRELHEMLVPTALKDSWTGSGNVILNCYQIKISPH-PGDRIYKEFGLFVKAPLPQ 821
E E P L ++ + Y I++ P+ P + + L + L
Sbjct: 680 EKIQYNTE-QPCYFPPELVSQFSAQPETTYHFYLIRMKPNSPRNFHLNDVLLGTRVVLED 739
Query: 822 EAERIDLELHLARSRYVKVNLVPSGVVELLEDEITQAESFQEMFLKVILDRSEFVQDYVP 881
+ L R + V L G L ++E+ FQ +V+LD S V++ +
Sbjct: 740 DIGNTSFRLEDHRGT-IAVTLSYVGAFHLTQEEVLFCRRFQITLFRVLLDHS--VENLME 799
Query: 882 LRNNVSGSISSA-SYLLLPMIFQDNEGSSLIDWKVIR--RCLSSQIFQNHA-CSAVRETA 941
N + A YLL+P + +SLIDW+VIR S ++ + H CS T
Sbjct: 800 ALNGLHLRDGVALDYLLVPS--THSHETSLIDWEVIRSVNLTSHEVLEKHENCS----TN 859
Query: 942 SSDTHLTLYDGRRRLCDIENSLVYVPYKREFFFVTHIVRSKNGYS--RYKNSGSLSHFEH 1001
+ L DG C ++N+LVY P+ + ++ + NG S +NSG ++ E+
Sbjct: 860 GASRILHTKDGLFCTCVVQNALVYTPHNGYVYCTKGVLNNLNGNSLLTKRNSGDQTYIEY 919
Query: 1002 LLERFDIHLKYPEQPLLCAKPLFHLHNLLHDRRLNDSEACDLIEHLIDLPPELCQLKITG 1061
ER I L + ++PLL + +F LH+ LH + + D ++LPPELC + ++
Sbjct: 920 YEERHGIQLNFVDEPLLNGRHIFTLHSYLHMAKKKKEKEHD--REFVELPPELCHVILSP 979
Query: 1062 FTKDIGSSISLLPSFMHHLENFLVAIELKCTLAAAFPAASEVTSNRILEALTTEKCQERI 1121
+ D+ S + +PS M +E+ L+A LK ++ + + ++LEA+TT+KC+++
Sbjct: 980 ISVDMIYSYTFIPSVMQRIESLLIAYNLKKSIPKV-----NIPTIKVLEAITTKKCEDQF 1039
Query: 1122 SLERLEILGDAFLKFAVARHLFLTHDKFDEGELTRRRSYLVKNINLFKLATRKNLQVYIR 1181
LE LE LGD+FLK+AV + LF EG L+ ++ ++ N+ L + ++ LQ +IR
Sbjct: 1040 HLESLETLGDSFLKYAVCQQLFQHCHTHHEGLLSTKKDGMISNVMLCQFGCQQKLQGFIR 1099
Query: 1182 DQPFEPNQFYSLGRPCP--RICNEETRKDIHSHKNAKGGETKCSKGHHWLHKKTISDVVE 1241
D+ FEP + G+ + N+ + + + ++ L +K+++DVVE
Sbjct: 1100 DECFEPKGWMVPGQSSAAYSLVNDTLPESRNIYVASRRN----------LKRKSVADVVE 1159
Query: 1242 ALVGAFLVDSGFKAAIAFLKWIGIQVEFEASQVTDARMASNAYLRLADCISISALQDSLG 1301
+L+GA+L + G AA+ F+ W+GI+V+F T ++ ++ ++ +++ ++ L
Sbjct: 1160 SLIGAYLSEGGELAALMFMNWVGIKVDF-----TTTKIQRDSPIQAEKLVNVGYMESLLN 1219
Query: 1302 HQFLYKGLLLQALIHPSYHR-HGGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGLVTD 1361
+ F K LL++AL H SY CYQRLEFLGD+VLDYLIT +LY YP L PGL+TD
Sbjct: 1220 YSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLGDSVLDYLITKHLYDKYPCLSPGLLTD 1279
Query: 1362 LRSVFVMNEAFANISVDRFFYKFLICDSTSLQKDIKSYVNFIK--SPPSERGSLEQPTCP 1421
+RS V NE +A ++V +K ++ S L K I V+ + S S G + P
Sbjct: 1280 MRSASVNNECYALVAVKANLHKHILYASHHLHKHISRTVSEFEQSSLQSTFGWESDISFP 1339
Query: 1422 KVLGDMVESIVGAVLVDTGFDMNYVWKIMLSFLDSIMSFSGFQLSPIRDITEFCQDCGWK 1481
KVLGD++ES+ GA+ VD+G++ V+ + L +++ +L P+R++TE CQ W+
Sbjct: 1340 KVLGDVIESLAGAIFVDSGYNKEVVFASIKPLLGCMITPETVKLHPVRELTELCQK--WQ 1383
Query: 1482 LQFNATKVEKYFSVKAEVKGNNFHETASAANRRKKDAEKIAANLILSKLK 1501
+ + K F+V+ + K +F TA A++ KK A+K+A +L+ LK
Sbjct: 1400 FELSKAKDFDSFTVEVKAKEMSFAHTAKASD--KKMAKKLAYKEVLNLLK 1383
BLAST of Sed0002244 vs. TAIR 10
Match:
AT3G03300.2 (dicer-like 2 )
HSP 1 Score: 608.2 bits (1567), Expect = 2.0e-173
Identity = 438/1365 (32.09%), Postives = 719/1365 (52.67%), Query Frame = 0
Query: 167 QQAKVIEDSIDFKVRVYCGGFKGLN--SHYDWEREMEEHEVFVMTPQTLLRSLNHCYIKM 226
QQA+ ++ D KV +Y G G++ W++E++++EV VMTP LL +L H ++ +
Sbjct: 71 QQAEALKMHTDLKVGMYWGDM-GVDFWDSSTWKQEVDKYEVLVMTPAILLDALRHSFLSL 130
Query: 227 EFVELLIFDECHHAQVKSDHSYAQIMKVFY----KGSVAKRPRIFGMTASPVVGKGTCNQ 286
+++LI DECHHA K H YA IM+ FY + PRIFGMTAS V KG N
Sbjct: 131 SMIKVLIVDECHHAGGK--HPYACIMREFYHKELNSGTSNVPRIFGMTASLVKTKGE-NL 190
Query: 287 QSLSKSINSLEKLLDAKVYSVEDREDLEAFV--SSPLVKIYYYGPVANGSSSSFMTYCCQ 346
S K I+ LE L+++KVY+ E+ L FV S+P K Y + + + +S + +
Sbjct: 191 DSYWKKIHELETLMNSKVYTCENESVLAGFVPFSTPSFKYYQHIKIPSPKRASLVE---K 250
Query: 347 LEEVKRQCVVALGQMKGEHEGLLATKKLLLRMHDNIIFCLENLGVWGALQASKILLSGDN 406
LE + + ++LG + + + +K LLR+ + +CL++LG+ A +A++ L + N
Sbjct: 251 LERLTIKHRLSLGTLDLNSSTVDSVEKRLLRISSTLTYCLDDLGILLAQKAAQSLSASQN 310
Query: 407 SERSELIEAAEGNPNNDSLSDRYLNQAA-EILASGCKIDGGMPDMLNVDI------LEDP 466
+ E N + +L ++ + A+ E LA +P LN + E
Sbjct: 311 ----DSFLWGELNMFSVALVKKFCSDASQEFLAE-------IPQGLNWSVANINGNAEAG 370
Query: 467 FFSKKLLRLIGILSSFGHRLNMKCIIFVNRIVIARSL-SYILQNLKFLAYWKCDFLVGVH 526
+ K + LI L + N++CIIFV+R++ A L S + + L WK ++ G +
Sbjct: 371 LLTLKTVCLIETLLGYSSLENIRCIIFVDRVITAIVLESLLAEILPNCNNWKTKYVAGNN 430
Query: 527 SKLRSMSRKTMNRILTKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPETVSSFIQSR 586
S L++ +RK N I+ FR G +N+++AT + EEGLD+Q+C LVIRFD + SFIQSR
Sbjct: 431 SGLQNQTRKKQNEIVEDFRRGLVNIIVATSILEEGLDVQSCNLVIRFDPASNICSFIQSR 490
Query: 587 GRARMPQSEYAFIVDRGNEKERGLIDGFQKDENHMNREISSRS---SNETFQSHEESIYR 646
GRARM S+Y +V+ G+ + + + M E S +E ++R
Sbjct: 491 GRARMQNSDYLMMVESGDLLTQSRLMKYLSGGKRMREESLDHSLVPCPPLPDDSDEPLFR 550
Query: 647 VVSTGASVTSGLSISLLHEYCSKLPHDEYFDPKPKFFYYDDLEGTICHAILPSNAPIPQV 706
V STGA+VT S+SL++ YCS+LP DEYF P P+F D +G+ C LP + P+ +V
Sbjct: 551 VESTGATVTLSSSVSLIYHYCSRLPSDEYFKPAPRFDVNKD-QGS-CTLYLPKSCPVKEV 610
Query: 707 VSRVQFSRDAAKKDACLKAIEELHKLGAFNDFLLPMRDNAIEEELELASCDSDSSEDETS 766
+ + + K+ CLKA +LHK+GA +D L+P ++ +A S E
Sbjct: 611 --KAEANNKVLKQAVCLKACIQLHKVGALSDHLVP--------DMVVAETVSQKLEKIQY 670
Query: 767 RRELHEMLVPTALKDSWTGSGNVILNCYQIKISPH-PGDRIYKEFGLFVKAPLPQEAERI 826
E P L ++ + Y I++ P+ P + + L + L +
Sbjct: 671 NTE-QPCYFPPELVSQFSAQPETTYHFYLIRMKPNSPRNFHLNDVLLGTRVVLEDDIGNT 730
Query: 827 DLELHLARSRYVKVNLVPSGVVELLEDEITQAESFQEMFLKVILDRSEFVQDYVPLRNNV 886
L R + V L G L ++E+ FQ +V+LD S V++ + N +
Sbjct: 731 SFRLEDHRGT-IAVTLSYVGAFHLTQEEVLFCRRFQITLFRVLLDHS--VENLMEALNGL 790
Query: 887 SGSISSA-SYLLLPMIFQDNEGSSLIDWKVIR--RCLSSQIFQNHA-CSAVRETASSDTH 946
A YLL+P + +SLIDW+VIR S ++ + H CS T +
Sbjct: 791 HLRDGVALDYLLVPS--THSHETSLIDWEVIRSVNLTSHEVLEKHENCS----TNGASRI 850
Query: 947 LTLYDGRRRLCDIENSLVYVPYKREFFFVTHIVRSKNGYS--RYKNSGSLSHFEHLLERF 1006
L DG C ++N+LVY P+ + ++ + NG S +NSG ++ E+ ER
Sbjct: 851 LHTKDGLFCTCVVQNALVYTPHNGYVYCTKGVLNNLNGNSLLTKRNSGDQTYIEYYEERH 910
Query: 1007 DIHLKYPEQPLLCAKPLFHLHNLLHDRRLNDSEACDLIEHLIDLPPELCQLKITGFTKDI 1066
I L + ++PLL + +F LH+ LH + + D ++LPPELC + ++ + D+
Sbjct: 911 GIQLNFVDEPLLNGRHIFTLHSYLHMAKKKKEKEHD--REFVELPPELCHVILSPISVDM 970
Query: 1067 GSSISLLPSFMHHLENFLVAIELKCTLAAAFPAASEVTSNRILEALTTEKCQERISLERL 1126
S + +PS M +E+ L+A LK ++ + + ++LEA+TT+KC+++ LE L
Sbjct: 971 IYSYTFIPSVMQRIESLLIAYNLKKSIPKV-----NIPTIKVLEAITTKKCEDQFHLESL 1030
Query: 1127 EILGDAFLKFAVARHLFLTHDKFDEGELTRRRSYLVKNINLFKLATRKNLQVYIRDQPFE 1186
E LGD+FLK+AV + LF EG L+ ++ ++ N+ L + ++ LQ +IRD+ FE
Sbjct: 1031 ETLGDSFLKYAVCQQLFQHCHTHHEGLLSTKKDGMISNVMLCQFGCQQKLQGFIRDECFE 1090
Query: 1187 PNQFYSLGRPCP--RICNEETRKDIHSHKNAKGGETKCSKGHHWLHKKTISDVVEALVGA 1246
P + G+ + N+ + + + ++ L +K+++DVVE+L+GA
Sbjct: 1091 PKGWMVPGQSSAAYSLVNDTLPESRNIYVASRRN----------LKRKSVADVVESLIGA 1150
Query: 1247 FLVDSGFKAAIAFLKWIGIQVEFEASQVTDARMASNAYLRLADCISISALQDSLGHQFLY 1306
+L + G AA+ F+ W+GI+V+F T ++ ++ ++ +++ ++ L + F
Sbjct: 1151 YLSEGGELAALMFMNWVGIKVDF-----TTTKIQRDSPIQAEKLVNVGYMESLLNYSFED 1210
Query: 1307 KGLLLQALIHPSYHR-HGGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGLVTDLRSVF 1366
K LL++AL H SY CYQRLEFLGD+VLDYLIT +LY YP L PGL+TD+RS
Sbjct: 1211 KSLLVEALTHGSYMMPEIPRCYQRLEFLGDSVLDYLITKHLYDKYPCLSPGLLTDMRSAS 1270
Query: 1367 VMNEAFANISVDRFFYKFLICDSTSLQKDIKSYVNFIK--SPPSERGSLEQPTCPKVLGD 1426
V NE +A ++V +K ++ S L K I V+ + S S G + PKVLGD
Sbjct: 1271 VNNECYALVAVKANLHKHILYASHHLHKHISRTVSEFEQSSLQSTFGWESDISFPKVLGD 1330
Query: 1427 MVESIVGAVLVDTGFDMNYVWKIMLSFLDSIMSFSGFQLSPIRDITEFCQDCGWKLQFNA 1486
++ES+ GA+ VD+G++ V+ + L +++ +L P+R++TE CQ W+ + +
Sbjct: 1331 VIESLAGAIFVDSGYNKEVVFASIKPLLGCMITPETVKLHPVRELTELCQK--WQFELSK 1369
Query: 1487 TKVEKYFSVKAEVKGNNFHETASAANRRKKDAEKIAANLILSKLK 1501
K F+V+ + K +F TA A++ KK A+K+A +L+ LK
Sbjct: 1391 AKDFDSFTVEVKAKEMSFAHTAKASD--KKMAKKLAYKEVLNLLK 1369
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P84634 | 0.0e+00 | 53.27 | Dicer-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=DCL4 PE=1 SV=2 | [more] |
A7LFZ6 | 0.0e+00 | 47.96 | Endoribonuclease Dicer homolog 4 OS=Oryza sativa subsp. japonica OX=39947 GN=DCL... | [more] |
Q5N870 | 1.6e-199 | 31.10 | Endoribonuclease Dicer homolog 3a OS=Oryza sativa subsp. japonica OX=39947 GN=DC... | [more] |
Q3EBC8 | 4.3e-189 | 32.80 | Endoribonuclease Dicer homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At3g03300 PE... | [more] |
Q7XD96 | 1.1e-179 | 30.61 | Endoribonuclease Dicer homolog 3b OS=Oryza sativa subsp. japonica OX=39947 GN=DC... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1C050 | 0.0e+00 | 83.48 | dicer-like protein 4 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007071 P... | [more] |
A0A6J1JAJ5 | 0.0e+00 | 81.75 | dicer-like protein 4 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485046 PE=3... | [more] |
A0A6J1E1P4 | 0.0e+00 | 82.01 | dicer-like protein 4 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111429985 PE... | [more] |
A0A6J1JJM5 | 0.0e+00 | 81.69 | dicer-like protein 4 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485046 PE=3... | [more] |
A0A6J1E2I1 | 0.0e+00 | 81.95 | dicer-like protein 4 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111429985 PE... | [more] |