Sed0002206 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAATGCTCCGATTTTACCTTTCCAAGAAGCTCTTCACGCTTCTTCATCCCTTCAAACCCTAACCTTACCGGCCGGCGACCAATTTCCGGCCGCCGATCTCTGGTTTCCTTCCCGAACACACCGCCGTACTTTTCGCCTCTTTCAATCAAATCCACGGCCTCTGGAACCGCCGGCGGCTCCTTCTACGACTTGCTCGGCGTTTCCTCGTCGGAATCCATGGCGGAAATCAAGCGCGCGTACAAGAAACTGGCTCTGATGTACCATCCCGACGTGTCGTCGTCGGCCGCGGAGCATACGAAAAGGTTCATTCGTGTTCGCGAGGCTTACGAGACGTTGTCGGATCCGATGAAGAGGGCGCTGTATGATAGAGATGTGGTTCGAGGACTTCGAGTCGCATTCTCAGCTCGGAGACGATGCGACCATGATGTGGCATTAGTTGAGTTGTCCATTTAATAACTATTTTGTTTTTTAATTTTAAAAATAAAGATAGAGTTATTGGGAGGTTAAATTAAAAATTAAATGGTTAATAAAGAGAGACTTCATTTTAAGAAAAATTGAGTTCACATCTATTTACTTTTGAGTAAAATTTCACTAAGAAAACTCATTTTGTAAATGAAATTATTAAAATGTAAATGAATTTTTATGACACCTTGTCATGTCATCAAAATATACAAATTTTACTTCATCAAAATAAGATTTTGGTCCTTGGTCACATTCTAATTTTAAGATTTTGGAAACCACAAATTCTATACAAAAGTAAGATGGTATGAGCCATGAGTGAAGGATTTTATCTTATTATATGTTTTATTTTGGATTTTTCAAGTTAGGAACGAATGTTTGATGTTTTTTTTTTTTAAACAATGTTTGATGTATTCTAGCTCAAGTTCGATATCTCCTTATATATAAAAGATAATTAAAAAAAAAAAAAAAAAAAACATATCCAAAATATACTCCAAATATGGGATATGTTACCATAAACTTCAGTATTCCGTTGTTGTTTTGTTCGTCAATATCTCTAAAAAATCTTATTCTCCATTCAGTAAAACAAAAACTTGCGTAAATCCCACTTGGGGAGCTCGAATGCGCCGGCAAATGAATGGATAA ATGCAATGCTCCGATTTTACCTTTCCAAGAAGCTCTTCACGCTTCTTCATCCCTTCAAACCCTAACCTTACCGGCCGGCGACCAATTTCCGGCCGCCGATCTCTGGTTTCCTTCCCGAACACACCGCCGTACTTTTCGCCTCTTTCAATCAAATCCACGGCCTCTGGAACCGCCGGCGGCTCCTTCTACGACTTGCTCGGCGTTTCCTCGTCGGAATCCATGGCGGAAATCAAGCGCGCGTACAAGAAACTGGCTCTGATGTACCATCCCGACGTGTCGTCGTCGGCCGCGGAGCATACGAAAAGGTTCATTCGTGTTCGCGAGGCTTACGAGACGTTGTCGGATCCGATGAAGAGGGCGCTGTATGATAGAGATGTGGTTCGAGGACTTCGAGTCGCATTCTCAGCTCGGAGACGATGCGACCATGATTATTCCGTTGTTGTTTTGTTCGTCAATATCTCTAAAAAATCTTATTCTCCATTCAGTAAAACAAAAACTTGCGTAAATCCCACTTGGGGAGCTCGAATGCGCCGGCAAATGAATGGATAA ATGCAATGCTCCGATTTTACCTTTCCAAGAAGCTCTTCACGCTTCTTCATCCCTTCAAACCCTAACCTTACCGGCCGGCGACCAATTTCCGGCCGCCGATCTCTGGTTTCCTTCCCGAACACACCGCCGTACTTTTCGCCTCTTTCAATCAAATCCACGGCCTCTGGAACCGCCGGCGGCTCCTTCTACGACTTGCTCGGCGTTTCCTCGTCGGAATCCATGGCGGAAATCAAGCGCGCGTACAAGAAACTGGCTCTGATGTACCATCCCGACGTGTCGTCGTCGGCCGCGGAGCATACGAAAAGGTTCATTCGTGTTCGCGAGGCTTACGAGACGTTGTCGGATCCGATGAAGAGGGCGCTGTATGATAGAGATGTGGTTCGAGGACTTCGAGTCGCATTCTCAGCTCGGAGACGATGCGACCATGATTATTCCGTTGTTGTTTTGTTCGTCAATATCTCTAAAAAATCTTATTCTCCATTCAGTAAAACAAAAACTTGCGTAAATCCCACTTGGGGAGCTCGAATGCGCCGGCAAATGAATGGATAA MQCSDFTFPRSSSRFFIPSNPNLTGRRPISGRRSLVSFPNTPPYFSPLSIKSTASGTAGGSFYDLLGVSSSESMAEIKRAYKKLALMYHPDVSSSAAEHTKRFIRVREAYETLSDPMKRALYDRDVVRGLRVAFSARRRCDHDYSVVVLFVNISKKSYSPFSKTKTCVNPTWGARMRRQMNG Homology
BLAST of Sed0002206 vs. NCBI nr
Match: XP_038893222.1 (chaperone protein dnaJ 20, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 190.3 bits (482), Expect = 1.5e-44 Identity = 117/205 (57.07%), Postives = 135/205 (65.85%), Query Frame = 0
BLAST of Sed0002206 vs. NCBI nr
Match: XP_008438327.1 (PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Cucumis melo]) HSP 1 Score: 189.9 bits (481), Expect = 1.9e-44 Identity = 115/202 (56.93%), Postives = 133/202 (65.84%), Query Frame = 0
BLAST of Sed0002206 vs. NCBI nr
Match: XP_004133982.1 (chaperone protein dnaJ 20, chloroplastic [Cucumis sativus] >KGN56713.1 hypothetical protein Csa_009538 [Cucumis sativus]) HSP 1 Score: 188.3 bits (477), Expect = 5.7e-44 Identity = 114/202 (56.44%), Postives = 131/202 (64.85%), Query Frame = 0
BLAST of Sed0002206 vs. NCBI nr
Match: KAG7028743.1 (Chaperone protein dnaJ 20, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 187.6 bits (475), Expect = 9.7e-44 Identity = 115/205 (56.10%), Postives = 134/205 (65.37%), Query Frame = 0
BLAST of Sed0002206 vs. NCBI nr
Match: XP_022949677.1 (chaperone protein dnaJ 20, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 187.6 bits (475), Expect = 9.7e-44 Identity = 115/205 (56.10%), Postives = 134/205 (65.37%), Query Frame = 0
BLAST of Sed0002206 vs. ExPASy Swiss-Prot
Match: Q9SDN0 (Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ20 PE=1 SV=2) HSP 1 Score: 105.5 bits (262), Expect = 6.3e-22 Identity = 78/189 (41.27%), Postives = 100/189 (52.91%), Query Frame = 0
BLAST of Sed0002206 vs. ExPASy Swiss-Prot
Match: Q5L6F7 (Chaperone protein DnaJ OS=Chlamydia abortus (strain DSM 27085 / S26/3) OX=218497 GN=dnaJ PE=3 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 5.4e-13 Identity = 37/63 (58.73%), Postives = 45/63 (71.43%), Query Frame = 0
BLAST of Sed0002206 vs. ExPASy Swiss-Prot
Match: Q823T2 (Chaperone protein DnaJ OS=Chlamydophila caviae (strain ATCC VR-813 / DSM 19441 / GPIC) OX=227941 GN=dnaJ PE=3 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 5.4e-13 Identity = 37/63 (58.73%), Postives = 45/63 (71.43%), Query Frame = 0
BLAST of Sed0002206 vs. ExPASy Swiss-Prot
Match: Q253T6 (Chaperone protein DnaJ OS=Chlamydia felis (strain Fe/C-56) OX=264202 GN=dnaJ PE=3 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 2.0e-12 Identity = 37/63 (58.73%), Postives = 44/63 (69.84%), Query Frame = 0
BLAST of Sed0002206 vs. ExPASy Swiss-Prot
Match: Q9Z9E9 (Chaperone protein DnaJ OS=Chlamydia pneumoniae OX=83558 GN=dnaJ PE=3 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 5.9e-12 Identity = 35/63 (55.56%), Postives = 43/63 (68.25%), Query Frame = 0
BLAST of Sed0002206 vs. ExPASy TrEMBL
Match: A0A1S3AWS2 (chaperone protein dnaJ 20, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103483465 PE=4 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 9.4e-45 Identity = 115/202 (56.93%), Postives = 133/202 (65.84%), Query Frame = 0
BLAST of Sed0002206 vs. ExPASy TrEMBL
Match: A0A0A0L4L9 (Chaperone protein dnaJ 20, chloroplast OS=Cucumis sativus OX=3659 GN=Csa_3G129700 PE=4 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 2.7e-44 Identity = 114/202 (56.44%), Postives = 131/202 (64.85%), Query Frame = 0
BLAST of Sed0002206 vs. ExPASy TrEMBL
Match: A0A6J1GCT3 (chaperone protein dnaJ 20, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111452997 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 4.7e-44 Identity = 115/205 (56.10%), Postives = 134/205 (65.37%), Query Frame = 0
BLAST of Sed0002206 vs. ExPASy TrEMBL
Match: A0A6J1IRB6 (chaperone protein dnaJ 20, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479792 PE=4 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 1.0e-43 Identity = 114/202 (56.44%), Postives = 132/202 (65.35%), Query Frame = 0
BLAST of Sed0002206 vs. ExPASy TrEMBL
Match: A0A6J1IB32 (chaperone protein dnaJ 20, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111473471 PE=4 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 1.8e-43 Identity = 113/205 (55.12%), Postives = 134/205 (65.37%), Query Frame = 0
BLAST of Sed0002206 vs. TAIR 10
Match: AT4G13830.2 (DNAJ-like 20 ) HSP 1 Score: 105.5 bits (262), Expect = 4.5e-23 Identity = 78/189 (41.27%), Postives = 100/189 (52.91%), Query Frame = 0
BLAST of Sed0002206 vs. TAIR 10
Match: AT4G13830.1 (DNAJ-like 20 ) HSP 1 Score: 97.8 bits (242), Expect = 9.4e-21 Identity = 66/147 (44.90%), Postives = 85/147 (57.82%), Query Frame = 0
BLAST of Sed0002206 vs. TAIR 10
Match: AT3G62600.1 (DNAJ heat shock family protein ) HSP 1 Score: 70.9 bits (172), Expect = 1.2e-12 Identity = 38/79 (48.10%), Postives = 50/79 (63.29%), Query Frame = 0
BLAST of Sed0002206 vs. TAIR 10
Match: AT4G39960.1 (Molecular chaperone Hsp40/DnaJ family protein ) HSP 1 Score: 67.0 bits (162), Expect = 1.8e-11 Identity = 38/76 (50.00%), Postives = 47/76 (61.84%), Query Frame = 0
BLAST of Sed0002206 vs. TAIR 10
Match: AT2G22360.1 (DNAJ heat shock family protein ) HSP 1 Score: 64.7 bits (156), Expect = 8.8e-11 Identity = 36/76 (47.37%), Postives = 46/76 (60.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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