Sed0002205 (gene) Chayote v1

Overview
NameSed0002205
Typegene
OrganismSechium edule (Chayote v1)
DescriptionSerine/threonine-protein phosphatase 7 long form-like protein
LocationLG12: 33262504 .. 33263271 (+)
RNA-Seq ExpressionSed0002205
SyntenySed0002205
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAAAGTAGGCCAACGCCCAACGCACAAACACGCATCCCACATCGCTTAAATTTCCCATTTCCCCCACAACTGTCTTCTCCTCAACCCCCCCTTTCTATATAAACCCTTCTTCTCCACTCCCCTCTCTCCCCATCTCCGGCGACGCCCACTCCGCCGGCATCCATGGCAGACGCCTTCCTCCGATCCCTCCACCACGGCTGTATCGCCGGCTGCGACGCCGACATCGCCCGCCGTCCCTACCACAAGAACTGCGGCTGCGCTCTCCACGGTCGAGCCAGCAGCCGCTGCTCGCACGCCGTCTCGAAGCAAAGCACCGTCTCGTATCCGATTCGGCGAGCCTGGAGTGAGAGCTGCCTGGCTATGGCTTCTGATAATTCCGGTTCTTCCTCTTCCTCGTCTTCGCCCTAGGTTTGGATCTAATTGAAGATGAGATCTCAGTATTCTGATTCTTTGTTATTCTTTTTACTTGGTGGAATTTAGTGAGTGATGCAAATTGCTTGGCTGTGTTCTTCTGTTCTGATTTTTTTTGTCAATGGAATGGATGTGGTTTCTGTAATTCGATGAAGTTGATTCCTGTTTCATAATCGTTTCATCTGTTTCACTGAAATGGCGATTGGTTTTTGAATTTGATGTTTGAACTTTCTGGATCAAGTTCGCAGTGCGAAATTCACTGATTGTATTTCGATTTCGAAGAGAGAGTTGATTCATGCTAATTTTCCAAGTTCAATTTTGAGGGATCCTTTAACTAATACCAAATTTGAATTTG

mRNA sequence

AAGAAAGTAGGCCAACGCCCAACGCACAAACACGCATCCCACATCGCTTAAATTTCCCATTTCCCCCACAACTGTCTTCTCCTCAACCCCCCCTTTCTATATAAACCCTTCTTCTCCACTCCCCTCTCTCCCCATCTCCGGCGACGCCCACTCCGCCGGCATCCATGGCAGACGCCTTCCTCCGATCCCTCCACCACGGCTGTATCGCCGGCTGCGACGCCGACATCGCCCGCCGTCCCTACCACAAGAACTGCGGCTGCGCTCTCCACGGTCGAGCCAGCAGCCGCTGCTCGCACGCCGTCTCGAAGCAAAGCACCGTCTCGTATCCGATTCGGCGAGCCTGGAGTGAGAGCTGCCTGGCTATGGCTTCTGATAATTCCGGTTCTTCCTCTTCCTCGTCTTCGCCCTAGGTTTGGATCTAATTGAAGATGAGATCTCAGTATTCTGATTCTTTGTTATTCTTTTTACTTGGTGGAATTTAGTGAGTGATGCAAATTGCTTGGCTGTGTTCTTCTGTTCTGATTTTTTTTGTCAATGGAATGGATGTGGTTTCTGTAATTCGATGAAGTTGATTCCTGTTTCATAATCGTTTCATCTGTTTCACTGAAATGGCGATTGGTTTTTGAATTTGATGTTTGAACTTTCTGGATCAAGTTCGCAGTGCGAAATTCACTGATTGTATTTCGATTTCGAAGAGAGAGTTGATTCATGCTAATTTTCCAAGTTCAATTTTGAGGGATCCTTTAACTAATACCAAATTTGAATTTG

Coding sequence (CDS)

ATGGCAGACGCCTTCCTCCGATCCCTCCACCACGGCTGTATCGCCGGCTGCGACGCCGACATCGCCCGCCGTCCCTACCACAAGAACTGCGGCTGCGCTCTCCACGGTCGAGCCAGCAGCCGCTGCTCGCACGCCGTCTCGAAGCAAAGCACCGTCTCGTATCCGATTCGGCGAGCCTGGAGTGAGAGCTGCCTGGCTATGGCTTCTGATAATTCCGGTTCTTCCTCTTCCTCGTCTTCGCCCTAG

Protein sequence

MADAFLRSLHHGCIAGCDADIARRPYHKNCGCALHGRASSRCSHAVSKQSTVSYPIRRAWSESCLAMASDNSGSSSSSSSP
Homology
BLAST of Sed0002205 vs. NCBI nr
Match: KAG6587850.1 (hypothetical protein SDJN03_16415, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 119.8 bits (299), Expect = 1.1e-23
Identity = 61/82 (74.39%), Postives = 68/82 (82.93%), Query Frame = 0

Query: 1  MADAFLRSLHHGCIAGCDADIARRPYHKNCGCALHGRASSRCSHAVSKQSTVSYPIRRAW 60
          MADA   S++HGCIA CDA+IARRPYHKNCGCALH R + RCSH++SK STVSYPIRRAW
Sbjct: 1  MADALFGSVYHGCIATCDAEIARRPYHKNCGCALHDRDNRRCSHSMSKHSTVSYPIRRAW 60

Query: 61 SESCLAM-ASDNSGSSSSSSSP 82
          SE CLAM A+  SG SS SSSP
Sbjct: 61 SEGCLAMAAASGSGISSPSSSP 82

BLAST of Sed0002205 vs. NCBI nr
Match: XP_008443899.1 (PREDICTED: uncharacterized protein LOC103487382 [Cucumis melo])

HSP 1 Score: 109.4 bits (272), Expect = 1.5e-20
Identity = 56/82 (68.29%), Postives = 65/82 (79.27%), Query Frame = 0

Query: 1  MADAFLRSLHHGCIAGCDADIARRPYHKNCGCALHGRASSRCSHAVSKQSTVSYPIRRAW 60
          MADAFLR ++HGCIAG DA I RRPYHKNC CALH R + RCSH++SK  +VSYPIRRAW
Sbjct: 1  MADAFLRCVYHGCIAGPDAGIDRRPYHKNCSCALHDRDNRRCSHSLSKHKSVSYPIRRAW 60

Query: 61 SESCLAMASDNSGSS-SSSSSP 82
          SE CLAM + ++ S  SS SSP
Sbjct: 61 SEGCLAMVAASAASGVSSPSSP 82

BLAST of Sed0002205 vs. NCBI nr
Match: KAE8653037.1 (hypothetical protein Csa_019637 [Cucumis sativus])

HSP 1 Score: 102.1 bits (253), Expect = 2.4e-18
Identity = 51/80 (63.75%), Postives = 61/80 (76.25%), Query Frame = 0

Query: 1  MADAFLRSLHHGCIAGCDADIARRPYHKNCGCALHGRASSRCSHAVSKQSTVSYPIRRAW 60
          MADA LR +++GCI   DA+I RRPYHKNC CALH R + RCSH++SK  +VSYPIRRAW
Sbjct: 1  MADALLRCVYYGCIVSPDAEIDRRPYHKNCSCALHDRDNKRCSHSMSKHKSVSYPIRRAW 60

Query: 61 SESCLAMASDNSGSSSSSSS 81
          SE CLAM + +  SS SS S
Sbjct: 61 SEGCLAMVAASGISSPSSPS 80

BLAST of Sed0002205 vs. NCBI nr
Match: XP_007013703.2 (PREDICTED: uncharacterized protein LOC18588916 [Theobroma cacao])

HSP 1 Score: 99.4 bits (246), Expect = 1.5e-17
Identity = 49/78 (62.82%), Postives = 55/78 (70.51%), Query Frame = 0

Query: 2  ADAFLRSLHHGCIAGCDADIARRPYHKNCGCALHGRASSRCSHAVSKQSTVSYPIRRAWS 61
          AD   RSL+ GCIAGCD  I RRPYH+NC CALH ++   C HA  K   VSYPIRRAWS
Sbjct: 6  ADGLFRSLYEGCIAGCDIGIERRPYHRNCSCALHDKSRGNCPHAFPKCKNVSYPIRRAWS 65

Query: 62 ESCLAMASDNSGSSSSSS 80
          E CLAMA+ +  SS SSS
Sbjct: 66 EGCLAMAAASCHSSPSSS 83

BLAST of Sed0002205 vs. NCBI nr
Match: EOY31322.1 (Uncharacterized protein TCM_038276 [Theobroma cacao])

HSP 1 Score: 99.4 bits (246), Expect = 1.5e-17
Identity = 49/78 (62.82%), Postives = 55/78 (70.51%), Query Frame = 0

Query: 2  ADAFLRSLHHGCIAGCDADIARRPYHKNCGCALHGRASSRCSHAVSKQSTVSYPIRRAWS 61
          AD   RSL+ GCIAGCD  I RRPYH+NC CALH ++   C HA  K   VSYPIRRAWS
Sbjct: 6  ADGLFRSLYEGCIAGCDIGIERRPYHRNCSCALHDKSRGNCPHAFPKCKNVSYPIRRAWS 65

Query: 62 ESCLAMASDNSGSSSSSS 80
          E CLAMA+ +  SS SSS
Sbjct: 66 EGCLAMAAASCHSSPSSS 83

BLAST of Sed0002205 vs. ExPASy TrEMBL
Match: A0A1S3B9X6 (uncharacterized protein LOC103487382 OS=Cucumis melo OX=3656 GN=LOC103487382 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 7.2e-21
Identity = 56/82 (68.29%), Postives = 65/82 (79.27%), Query Frame = 0

Query: 1  MADAFLRSLHHGCIAGCDADIARRPYHKNCGCALHGRASSRCSHAVSKQSTVSYPIRRAW 60
          MADAFLR ++HGCIAG DA I RRPYHKNC CALH R + RCSH++SK  +VSYPIRRAW
Sbjct: 1  MADAFLRCVYHGCIAGPDAGIDRRPYHKNCSCALHDRDNRRCSHSLSKHKSVSYPIRRAW 60

Query: 61 SESCLAMASDNSGSS-SSSSSP 82
          SE CLAM + ++ S  SS SSP
Sbjct: 61 SEGCLAMVAASAASGVSSPSSP 82

BLAST of Sed0002205 vs. ExPASy TrEMBL
Match: A0A0A0LWK0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G265650 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.2e-18
Identity = 51/80 (63.75%), Postives = 61/80 (76.25%), Query Frame = 0

Query: 1  MADAFLRSLHHGCIAGCDADIARRPYHKNCGCALHGRASSRCSHAVSKQSTVSYPIRRAW 60
          MADA LR +++GCI   DA+I RRPYHKNC CALH R + RCSH++SK  +VSYPIRRAW
Sbjct: 1  MADALLRCVYYGCIVSPDAEIDRRPYHKNCSCALHDRDNKRCSHSMSKHKSVSYPIRRAW 60

Query: 61 SESCLAMASDNSGSSSSSSS 81
          SE CLAM + +  SS SS S
Sbjct: 61 SEGCLAMVAASGISSPSSPS 80

BLAST of Sed0002205 vs. ExPASy TrEMBL
Match: A0A061GQ94 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_038276 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 7.5e-18
Identity = 49/78 (62.82%), Postives = 55/78 (70.51%), Query Frame = 0

Query: 2  ADAFLRSLHHGCIAGCDADIARRPYHKNCGCALHGRASSRCSHAVSKQSTVSYPIRRAWS 61
          AD   RSL+ GCIAGCD  I RRPYH+NC CALH ++   C HA  K   VSYPIRRAWS
Sbjct: 6  ADGLFRSLYEGCIAGCDIGIERRPYHRNCSCALHDKSRGNCPHAFPKCKNVSYPIRRAWS 65

Query: 62 ESCLAMASDNSGSSSSSS 80
          E CLAMA+ +  SS SSS
Sbjct: 66 EGCLAMAAASCHSSPSSS 83

BLAST of Sed0002205 vs. ExPASy TrEMBL
Match: A0A1R3G2H0 (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_29274 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.7e-17
Identity = 48/80 (60.00%), Postives = 56/80 (70.00%), Query Frame = 0

Query: 2  ADAFLRSLHHGCIAGCDADIARRPYHKNCGCALHGRASSRCSHAVSKQSTVSYPIRRAWS 61
          AD   RS++ GCI+G D  I RRPYH+NCGCALH ++   C HA  K   VSYP+RRAWS
Sbjct: 6  ADGLFRSVYEGCISGSDIGIERRPYHRNCGCALHDKSKGNCPHAFPKNKNVSYPLRRAWS 65

Query: 62 ESCLAMASDNSGSSSSSSSP 82
          E CLAMA  +S  SS SSSP
Sbjct: 66 EGCLAMAVASSCHSSPSSSP 85

BLAST of Sed0002205 vs. ExPASy TrEMBL
Match: A0A6P5ZAR1 (uncharacterized protein LOC111299002 OS=Durio zibethinus OX=66656 GN=LOC111299002 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.2e-17
Identity = 47/78 (60.26%), Postives = 55/78 (70.51%), Query Frame = 0

Query: 2  ADAFLRSLHHGCIAGCDADIARRPYHKNCGCALHGRASSRCSHAVSKQSTVSYPIRRAWS 61
          AD   RS++ GCI+GCD  I RRPYH+NC CALH ++   C HA  K   VSYPIRRAWS
Sbjct: 6  ADGLFRSIYEGCISGCDKGIERRPYHRNCRCALHDKSRGNCPHAFPKSKNVSYPIRRAWS 65

Query: 62 ESCLAMASDNSGSSSSSS 80
          E CLAMA+ +  SS SSS
Sbjct: 66 EGCLAMAAASCHSSPSSS 83

BLAST of Sed0002205 vs. TAIR 10
Match: AT2G46490.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35110.1); Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 68.2 bits (165), Expect = 3.5e-12
Identity = 43/90 (47.78%), Postives = 55/90 (61.11%), Query Frame = 0

Query: 2  ADAFLRSLHHGCIAGCDADIARRPYHKNCGCALHGRASS-----------RCSHAVSKQS 61
          AD   RS+  GCI+G D+ I RRPYHKNCGCALH ++S             C    S +S
Sbjct: 3  ADGIFRSIFEGCISGLDSAIERRPYHKNCGCALHDKSSGAGKNQNQRRPPSCRRHGSSES 62

Query: 62 TVSYPIRRAWSESCLAMASDNSGSSSSSSS 81
           +S+PIRR+WSE  + MA +   SSSSSS+
Sbjct: 63 -ISFPIRRSWSEGNI-MAMNLFSSSSSSSN 90

BLAST of Sed0002205 vs. TAIR 10
Match: AT5G35110.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 67.4 bits (163), Expect = 6.0e-12
Identity = 41/90 (45.56%), Postives = 55/90 (61.11%), Query Frame = 0

Query: 3  DAFLRSLHHGCIAGCDADIARRPYHKNCGCALH-----GRASSRCSHAVSKQSTVSYPIR 62
          D   R++  GCI+ CD+ I RRPYHKNCGCALH     G +++ C H   +   V +PI+
Sbjct: 7  DGIFRNIFEGCISSCDSSIQRRPYHKNCGCALHERSRGGGSATPCRH--GRSEVVMFPIQ 66

Query: 63 RAWSES---CLAMASDNSGSS----SSSSS 81
          R+WSE     L +AS +S S+    SSSSS
Sbjct: 67 RSWSEGNSLALHLASSSSSSNLQSLSSSSS 94

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6587850.11.1e-2374.39hypothetical protein SDJN03_16415, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_008443899.11.5e-2068.29PREDICTED: uncharacterized protein LOC103487382 [Cucumis melo][more]
KAE8653037.12.4e-1863.75hypothetical protein Csa_019637 [Cucumis sativus][more]
XP_007013703.21.5e-1762.82PREDICTED: uncharacterized protein LOC18588916 [Theobroma cacao][more]
EOY31322.11.5e-1762.82Uncharacterized protein TCM_038276 [Theobroma cacao][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3B9X67.2e-2168.29uncharacterized protein LOC103487382 OS=Cucumis melo OX=3656 GN=LOC103487382 PE=... [more]
A0A0A0LWK01.2e-1863.75Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G265650 PE=4 SV=1[more]
A0A061GQ947.5e-1862.82Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_038276 PE=4 SV=1[more]
A0A1R3G2H01.7e-1760.00Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_29274 PE=4 ... [more]
A0A6P5ZAR12.2e-1760.26uncharacterized protein LOC111299002 OS=Durio zibethinus OX=66656 GN=LOC11129900... [more]
Match NameE-valueIdentityDescription
AT2G46490.13.5e-1247.78unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G35110.16.0e-1245.56unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35121HOMEODOMAIN PROTEIN 8, PUTATIVE-RELATEDcoord: 2..80
NoneNo IPR availablePANTHERPTHR35121:SF2BNAC04G52100D PROTEINcoord: 2..80

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0002205.1Sed0002205.1mRNA