Sed0002199 (gene) Chayote v1

Overview
NameSed0002199
Typegene
OrganismSechium edule (Chayote v1)
Descriptioncysteine proteinase inhibitor A-like
LocationLG14: 757611 .. 758211 (-)
RNA-Seq ExpressionSed0002199
SyntenySed0002199
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCCTACTAAGCATTTCGAAATATCTCTATCAAAGATATTGCAATGGGTGATATCTATCGTCCACATGTGATAACTGATATCAATGCACAAGAGGTGCAAGAACAGGGAAGGTATGCAGTGGATTATCATAACGAGAAAACCGGAGACAAGTTGACGTTCAAGCGCGTCTTGAACGGTTTAGCTTGCGCCCCTTGTGCTCCCGGTCCTCCTAGTTCATTTCATCATCTTGTGTTGGTGGCTGAAACCGTTGATAAAATTCCTTGGACATATGAGGCTAAGCTGTACCACCAATTTCCGTCCGAGAAATCCATCTCTCTTGAACCTATCCTCGAGTACAAGTACAAGGAGTAAAGCTAAACTCTTGCGTTTATGTAAGACAATATGCTTGCTTATACTATGAAAGTTTGCAATATTGTCTTCCTTGTATGAATGCTCATGTCCCAACAATAAACAAACTTATATATTTAGAGTTCTTTAAATGTCGTGGCTATACATATGCAAAATATTCTCAAGCACTTCATATTTTCTCTTAAAGCTCCATGTCTAAGAAATAAAATATAAAATTGCATACAAGCTCACAATTTCATAACAAACTAGAAG

mRNA sequence

TCCCTACTAAGCATTTCGAAATATCTCTATCAAAGATATTGCAATGGGTGATATCTATCGTCCACATGTGATAACTGATATCAATGCACAAGAGGTGCAAGAACAGGGAAGGTATGCAGTGGATTATCATAACGAGAAAACCGGAGACAAGTTGACGTTCAAGCGCGTCTTGAACGGTTTAGCTTGCGCCCCTTGTGCTCCCGGTCCTCCTAGTTCATTTCATCATCTTGTGTTGGTGGCTGAAACCGTTGATAAAATTCCTTGGACATATGAGGCTAAGCTGTACCACCAATTTCCGTCCGAGAAATCCATCTCTCTTGAACCTATCCTCGAGTACAAGTACAAGGAGTAAAGCTAAACTCTTGCGTTTATGTAAGACAATATGCTTGCTTATACTATGAAAGTTTGCAATATTGTCTTCCTTGTATGAATGCTCATGTCCCAACAATAAACAAACTTATATATTTAGAGTTCTTTAAATGTCGTGGCTATACATATGCAAAATATTCTCAAGCACTTCATATTTTCTCTTAAAGCTCCATGTCTAAGAAATAAAATATAAAATTGCATACAAGCTCACAATTTCATAACAAACTAGAAG

Coding sequence (CDS)

ATGGGTGATATCTATCGTCCACATGTGATAACTGATATCAATGCACAAGAGGTGCAAGAACAGGGAAGGTATGCAGTGGATTATCATAACGAGAAAACCGGAGACAAGTTGACGTTCAAGCGCGTCTTGAACGGTTTAGCTTGCGCCCCTTGTGCTCCCGGTCCTCCTAGTTCATTTCATCATCTTGTGTTGGTGGCTGAAACCGTTGATAAAATTCCTTGGACATATGAGGCTAAGCTGTACCACCAATTTCCGTCCGAGAAATCCATCTCTCTTGAACCTATCCTCGAGTACAAGTACAAGGAGTAA

Protein sequence

MGDIYRPHVITDINAQEVQEQGRYAVDYHNEKTGDKLTFKRVLNGLACAPCAPGPPSSFHHLVLVAETVDKIPWTYEAKLYHQFPSEKSISLEPILEYKYKE
Homology
BLAST of Sed0002199 vs. NCBI nr
Match: XP_008442277.1 (PREDICTED: cysteine proteinase inhibitor A-like [Cucumis melo] >KAA0041897.1 cysteine proteinase inhibitor A-like [Cucumis melo var. makuwa] >TYK05422.1 cysteine proteinase inhibitor A-like [Cucumis melo var. makuwa])

HSP 1 Score: 65.5 bits (158), Expect = 3.1e-07
Identity = 43/104 (41.35%), Postives = 59/104 (56.73%), Query Frame = 0

Query: 10  ITDINAQ-EVQEQGRYAVDYHNEKTGDKLTFKRVLNGLACAPCAPGPP--SSFHHLVLVA 69
           I DIN   EVQ+ G   VD HN+KTG+ L F RV+NGLA +   P  P     + LVL A
Sbjct: 10  IEDINDNLEVQDLGNLTVDDHNKKTGENLKFVRVVNGLAASFSDPISPLGGVLYELVLEA 69

Query: 70  ETVDKIPWTYEAKL---------YHQFPSEKSISLEPILEYKYK 102
            T  KI WTY+A++         +H   S +  S +P+LEY+++
Sbjct: 70  ITTSKINWTYKARVSKSKAITPPFHMLYSFQ--SFKPVLEYEHQ 111

BLAST of Sed0002199 vs. NCBI nr
Match: KAE8649716.1 (hypothetical protein Csa_012476 [Cucumis sativus])

HSP 1 Score: 62.8 bits (151), Expect = 2.0e-06
Identity = 40/100 (40.00%), Postives = 51/100 (51.00%), Query Frame = 0

Query: 10  ITDINAQEVQEQGRYAVDYHNEKTGDKLTFKRVLNGLACAPCAPGPP--SSFHHLVLVAE 69
           I DIN  +VQE G   VD HN+KTG+ L F RV+NGL      P  P   + + LVL A 
Sbjct: 10  IKDINDPQVQEIGNLTVDDHNKKTGENLKFVRVVNGLFAGFVDPFSPLGGTVYELVLEAI 69

Query: 70  TVDKIPWTYEAKLYHQFPSE------KSISLEPILEYKYK 102
              KI WTY+ K+                S EP+L+Y+ K
Sbjct: 70  NAGKINWTYKVKVSASTTIRPLGVVYNFQSFEPVLQYEEK 109

BLAST of Sed0002199 vs. NCBI nr
Match: XP_022926150.1 (uncharacterized protein LOC111433339 isoform X2 [Cucurbita moschata])

HSP 1 Score: 56.6 bits (135), Expect = 1.4e-04
Identity = 31/78 (39.74%), Postives = 44/78 (56.41%), Query Frame = 0

Query: 7  PHVITDINAQEVQEQGRYAVDYHNEKTGDKLTFKRVLNGLACAPCAPGPPSSFHHLVLVA 66
          P+ I  +N ++VQE    A+ + NEK    L +KRV+NGL+ + C         H VLV 
Sbjct: 11 PYAIRGVNHKKVQEAAEAAIKWKNEKERRCLIYKRVINGLSDSKC---NHEDSQHYVLVI 70

Query: 67 ETV--DKIPWTYEAKLYH 83
          E +  D IPW+Y AK+ H
Sbjct: 71 EAINDDGIPWSYIAKVKH 85

BLAST of Sed0002199 vs. NCBI nr
Match: XP_022926149.1 (uncharacterized protein LOC111433339 isoform X1 [Cucurbita moschata])

HSP 1 Score: 55.5 bits (132), Expect = 3.2e-04
Identity = 30/76 (39.47%), Postives = 44/76 (57.89%), Query Frame = 0

Query: 7  PHVITDINAQEVQEQGRYAVDYHNEKTGDKLTFKRVLNGLACAPCAPGPPSSFHHLVLVA 66
          P+ I  IN ++VQE    A+ + NE+    L +KRV+NGL+ + C     S  + LV+ A
Sbjct: 11 PYAIRGINHKKVQEAAEAAIKWKNEREKRCLVYKRVINGLSDSKC-NHEDSQHYALVIEA 70

Query: 67 ETVDKIPWTYEAKLYH 83
             D IPW+Y AK+ H
Sbjct: 71 INDDGIPWSYIAKVKH 85

BLAST of Sed0002199 vs. NCBI nr
Match: XP_038891086.1 (uncharacterized protein LOC120080488 isoform X1 [Benincasa hispida])

HSP 1 Score: 54.7 bits (130), Expect = 5.5e-04
Identity = 36/88 (40.91%), Postives = 45/88 (51.14%), Query Frame = 0

Query: 7  PHVITDINAQEVQEQGRYAVDYHNEKTGDKLTFKRVLNGLACAPCAPGPPS--SFHHLVL 66
          P  I D+ ++E+Q  G +AV  HNE TG+KL F+RV+NGL       G  S      LVL
Sbjct: 14 PVPIKDVYSEEIQGCGSFAVREHNETTGEKLEFERVINGL-----EQGRRSIRIVFTLVL 73

Query: 67 VAETVDKIPWTYEAKLYHQFPSEKSISL 93
          VA+    I WTY AK      S     L
Sbjct: 74 VAKNSCGINWTYTAKSLFDLDSSSYFGL 96

BLAST of Sed0002199 vs. ExPASy TrEMBL
Match: A0A5A7TJK0 (Cysteine proteinase inhibitor A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G001140 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.5e-07
Identity = 43/104 (41.35%), Postives = 59/104 (56.73%), Query Frame = 0

Query: 10  ITDINAQ-EVQEQGRYAVDYHNEKTGDKLTFKRVLNGLACAPCAPGPP--SSFHHLVLVA 69
           I DIN   EVQ+ G   VD HN+KTG+ L F RV+NGLA +   P  P     + LVL A
Sbjct: 10  IEDINDNLEVQDLGNLTVDDHNKKTGENLKFVRVVNGLAASFSDPISPLGGVLYELVLEA 69

Query: 70  ETVDKIPWTYEAKL---------YHQFPSEKSISLEPILEYKYK 102
            T  KI WTY+A++         +H   S +  S +P+LEY+++
Sbjct: 70  ITTSKINWTYKARVSKSKAITPPFHMLYSFQ--SFKPVLEYEHQ 111

BLAST of Sed0002199 vs. ExPASy TrEMBL
Match: A0A1S3B5B9 (cysteine proteinase inhibitor A-like OS=Cucumis melo OX=3656 GN=LOC103486185 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.5e-07
Identity = 43/104 (41.35%), Postives = 59/104 (56.73%), Query Frame = 0

Query: 10  ITDINAQ-EVQEQGRYAVDYHNEKTGDKLTFKRVLNGLACAPCAPGPP--SSFHHLVLVA 69
           I DIN   EVQ+ G   VD HN+KTG+ L F RV+NGLA +   P  P     + LVL A
Sbjct: 10  IEDINDNLEVQDLGNLTVDDHNKKTGENLKFVRVVNGLAASFSDPISPLGGVLYELVLEA 69

Query: 70  ETVDKIPWTYEAKL---------YHQFPSEKSISLEPILEYKYK 102
            T  KI WTY+A++         +H   S +  S +P+LEY+++
Sbjct: 70  ITTSKINWTYKARVSKSKAITPPFHMLYSFQ--SFKPVLEYEHQ 111

BLAST of Sed0002199 vs. ExPASy TrEMBL
Match: A0A6J1EK72 (uncharacterized protein LOC111433339 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433339 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 7.0e-05
Identity = 31/78 (39.74%), Postives = 44/78 (56.41%), Query Frame = 0

Query: 7  PHVITDINAQEVQEQGRYAVDYHNEKTGDKLTFKRVLNGLACAPCAPGPPSSFHHLVLVA 66
          P+ I  +N ++VQE    A+ + NEK    L +KRV+NGL+ + C         H VLV 
Sbjct: 11 PYAIRGVNHKKVQEAAEAAIKWKNEKERRCLIYKRVINGLSDSKC---NHEDSQHYVLVI 70

Query: 67 ETV--DKIPWTYEAKLYH 83
          E +  D IPW+Y AK+ H
Sbjct: 71 EAINDDGIPWSYIAKVKH 85

BLAST of Sed0002199 vs. ExPASy TrEMBL
Match: A0A6J1EEA5 (uncharacterized protein LOC111433339 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433339 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.6e-04
Identity = 30/76 (39.47%), Postives = 44/76 (57.89%), Query Frame = 0

Query: 7  PHVITDINAQEVQEQGRYAVDYHNEKTGDKLTFKRVLNGLACAPCAPGPPSSFHHLVLVA 66
          P+ I  IN ++VQE    A+ + NE+    L +KRV+NGL+ + C     S  + LV+ A
Sbjct: 11 PYAIRGINHKKVQEAAEAAIKWKNEREKRCLVYKRVINGLSDSKC-NHEDSQHYALVIEA 70

Query: 67 ETVDKIPWTYEAKLYH 83
             D IPW+Y AK+ H
Sbjct: 71 INDDGIPWSYIAKVKH 85

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008442277.13.1e-0741.35PREDICTED: cysteine proteinase inhibitor A-like [Cucumis melo] >KAA0041897.1 cys... [more]
KAE8649716.12.0e-0640.00hypothetical protein Csa_012476 [Cucumis sativus][more]
XP_022926150.11.4e-0439.74uncharacterized protein LOC111433339 isoform X2 [Cucurbita moschata][more]
XP_022926149.13.2e-0439.47uncharacterized protein LOC111433339 isoform X1 [Cucurbita moschata][more]
XP_038891086.15.5e-0440.91uncharacterized protein LOC120080488 isoform X1 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TJK01.5e-0741.35Cysteine proteinase inhibitor A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A1S3B5B91.5e-0741.35cysteine proteinase inhibitor A-like OS=Cucumis melo OX=3656 GN=LOC103486185 PE=... [more]
A0A6J1EK727.0e-0539.74uncharacterized protein LOC111433339 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1EEA51.6e-0439.47uncharacterized protein LOC111433339 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.10coord: 6..101
e-value: 3.1E-9
score: 38.7
NoneNo IPR availableSUPERFAMILY54403Cystatin/monellincoord: 14..84

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0002199.1Sed0002199.1mRNA