Sed0002192 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCAAATCATAATGTACCGTCAGTACGGCATCGTCTTCGCTCCGACCGACGAGGAACTGTTCGAGCTCTATCTTTATCCGAAGATTGCTGAGGATTACAATGGTTCATTTACTCTACCCATGGTTGACCTCTACACCCAAGAACCTTCTCTCCTATGGCAACCATTTGGAGGGATTGATGGTCAAGACTTCTTTTGTTTCACCACACTCAACAAGAAGAAATCGCGTATCGTCCGAAAGGTTGCCTCCAACGGCGCTACTTGGAGCGGTGAAAACAAAGCAACCCGAGTATTTTCCGAGGCTATCGGTGCCTTTATCGGTAGTGTCAAACGCTTTCATTACGAGAATCCTAAACTCAAAGGTAGCATCGAGGATTGTTCTTGGACCATGTACGAGTACACTCTCGATCCGCCTTTGTACCGAAAGGAAAGCACATGATTCGTATGTACTTTGCAAGATTCGAAAAAGAATTGTGAAAGCAGTGAGGAAAGGAGTTCCAACATTTGTACAACCATTGGCTTCTTGGCCGCCTACAGCATCAGTTCCAGCACCAACACAAACATTGGCTTCTTCCCGGCCTACAACATCAGTTCCAGCACCAACACAAACATTGGCTTCTTCTCGGCCTACGACATCGATGGAAGTATACGACCAGAATCACCCCATTCCAGCCGAGATGGAGAATTACGACCCAAATATGACATTTACTGAGGATGAAATTAGACAACTTCTAGTTCATATGGATTTGAAACCGGTTGTGCAGGAGAATCGTGTACCACCATCCAATTTGAAGTAA ATGGATCAAATCATAATGTACCGTCAGTACGGCATCGTCTTCGCTCCGACCGACGAGGAACTGTTCGAGCTCTATCTTTATCCGAAGATTGCTGAGGATTACAATGGTTCATTTACTCTACCCATGGTTGACCTCTACACCCAAGAACCTTCTCTCCTATGGCAACCATTTGGAGGGATTGATGGTCAAGACTTCTTTTGTTTCACCACACTCAACAAGAAGAAATCGCGTATCGTCCGAAAGGTTGCCTCCAACGGCGCTACTTGGAGCGTGTCAAACGCTTTCATTACGAGAATCCTAAACTCAAAGGTAGCATCGAGGATTGTTCTTGGACCATGTACGAGTACACTCTCGATCCGCCTTTGTACCGAAAGGAAAGCACATGATTCGTATGTACTTTGCAAGATTCGAAAAAGAATTGTGAAAGCAGTGAGGAAAGGAGTTCCAACATTTGTACAACCATTGGCTTCTTGGCCGCCTACAGCATCAGTTCCAGCACCAACACAAACATTGGCTTCTTCCCGGCCTACAACATCAGTTCCAGCACCAACACAAACATTGGCTTCTTCTCGGCCTACGACATCGATGGAAGTATACGACCAGAATCACCCCATTCCAGCCGAGATGGAGAATTACGACCCAAATATGACATTTACTGAGGATGAAATTAGACAACTTCTAGTTCATATGGATTTGAAACCGGTTGTGCAGGAGAATCGTGTACCACCATCCAATTTGAAGTAA ATGGATCAAATCATAATGTACCGTCAGTACGGCATCGTCTTCGCTCCGACCGACGAGGAACTGTTCGAGCTCTATCTTTATCCGAAGATTGCTGAGGATTACAATGGTTCATTTACTCTACCCATGGTTGACCTCTACACCCAAGAACCTTCTCTCCTATGGCAACCATTTGGAGGGATTGATGGTCAAGACTTCTTTTGTTTCACCACACTCAACAAGAAGAAATCGCGTATCGTCCGAAAGGTTGCCTCCAACGGCGCTACTTGGAGCGTGTCAAACGCTTTCATTACGAGAATCCTAAACTCAAAGGTAGCATCGAGGATTGTTCTTGGACCATGTACGAGTACACTCTCGATCCGCCTTTGTACCGAAAGGAAAGCACATGATTCGTATGTACTTTGCAAGATTCGAAAAAGAATTGTGAAAGCAGTGAGGAAAGGAGTTCCAACATTTGTACAACCATTGGCTTCTTGGCCGCCTACAGCATCAGTTCCAGCACCAACACAAACATTGGCTTCTTCCCGGCCTACAACATCAGTTCCAGCACCAACACAAACATTGGCTTCTTCTCGGCCTACGACATCGATGGAAGTATACGACCAGAATCACCCCATTCCAGCCGAGATGGAGAATTACGACCCAAATATGACATTTACTGAGGATGAAATTAGACAACTTCTAGTTCATATGGATTTGAAACCGGTTGTGCAGGAGAATCGTGTACCACCATCCAATTTGAAGTAA MDQIIMYRQYGIVFAPTDEELFELYLYPKIAEDYNGSFTLPMVDLYTQEPSLLWQPFGGIDGQDFFCFTTLNKKKSRIVRKVASNGATWSVSNAFITRILNSKVASRIVLGPCTSTLSIRLCTERKAHDSYVLCKIRKRIVKAVRKGVPTFVQPLASWPPTASVPAPTQTLASSRPTTSVPAPTQTLASSRPTTSMEVYDQNHPIPAEMENYDPNMTFTEDEIRQLLVHMDLKPVVQENRVPPSNLK Homology
BLAST of Sed0002192 vs. NCBI nr
Match: XP_038880323.1 (NAC domain-containing protein 96-like [Benincasa hispida]) HSP 1 Score: 125.2 bits (313), Expect = 8.0e-25 Identity = 89/255 (34.90%), Postives = 130/255 (50.98%), Query Frame = 0
BLAST of Sed0002192 vs. NCBI nr
Match: KGN65836.2 (hypothetical protein Csa_019715 [Cucumis sativus]) HSP 1 Score: 121.3 bits (303), Expect = 1.2e-23 Identity = 70/173 (40.46%), Postives = 96/173 (55.49%), Query Frame = 0
BLAST of Sed0002192 vs. NCBI nr
Match: KAE8652623.1 (hypothetical protein Csa_013642 [Cucumis sativus]) HSP 1 Score: 121.3 bits (303), Expect = 1.2e-23 Identity = 69/171 (40.35%), Postives = 94/171 (54.97%), Query Frame = 0
BLAST of Sed0002192 vs. NCBI nr
Match: XP_011660358.2 (uncharacterized protein LOC105436381 [Cucumis sativus]) HSP 1 Score: 121.3 bits (303), Expect = 1.2e-23 Identity = 69/171 (40.35%), Postives = 94/171 (54.97%), Query Frame = 0
BLAST of Sed0002192 vs. NCBI nr
Match: XP_008443570.1 (PREDICTED: NAC domain-containing protein 105-like [Cucumis melo]) HSP 1 Score: 117.5 bits (293), Expect = 1.7e-22 Identity = 73/184 (39.67%), Postives = 96/184 (52.17%), Query Frame = 0
BLAST of Sed0002192 vs. ExPASy TrEMBL
Match: A0A1S3B8F1 (NAC domain-containing protein 105-like OS=Cucumis melo OX=3656 GN=LOC103487127 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 8.1e-23 Identity = 73/184 (39.67%), Postives = 96/184 (52.17%), Query Frame = 0
BLAST of Sed0002192 vs. ExPASy TrEMBL
Match: A0A5A7UPM7 (NAC domain-containing protein 105-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00950 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 4.4e-21 Identity = 63/157 (40.13%), Postives = 85/157 (54.14%), Query Frame = 0
BLAST of Sed0002192 vs. ExPASy TrEMBL
Match: A0A5D3BHG6 (NAC domain-containing protein 105-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00980 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 4.4e-21 Identity = 63/157 (40.13%), Postives = 85/157 (54.14%), Query Frame = 0
BLAST of Sed0002192 vs. ExPASy TrEMBL
Match: A0A6J1F2C3 (NAC domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=LOC111441766 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 1.3e-20 Identity = 79/203 (38.92%), Postives = 104/203 (51.23%), Query Frame = 0
BLAST of Sed0002192 vs. ExPASy TrEMBL
Match: A0A6J1F881 (NAC domain-containing protein 96-like OS=Cucurbita moschata OX=3662 GN=LOC111441754 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 2.9e-20 Identity = 63/153 (41.18%), Postives = 87/153 (56.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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