Sed0002185 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAGAACCCTAGGTTCAAAGCTTTTCTACACACAAATCTCTCAACTTCAAACCAAAGCTTCTTTTGTTTTCTCTTCTCTCTTTCGGAAAATATACATAAATAATGAAGACAACTCTAAGGCTATCTGGTGTTTTCATTCTTTTCTTAGTTTTATGTTTAAATCATGAGAGTATTTACGTAGAATGCCGGCATCTGAAATCATCGAAATGCAAATGCTCGAAATTGGTCTCTCCACCAGCAGTTAATCTCGGTGCGAAAAAGACCGCCACCGGGGACGTGATTTTTGCTGGAAATCGTCAACAGTTTAAGACAAGCAAAGCCGAACAGCCTCAAGACTTTCGTCCCACATCGCCCGGGCACAGTCCTGGAGTTGGCCACCATATCAACAACTGAAAAGAAGCTTCTGATGATTCTGTTATCACTGTTTAATTTCACATCCTGCATTCCGTTGTTTTCTCTCTCTGAAGGTTAAAAAAATATGCATTCCCATGTAAAGTTGTGACTTAAAGATCTATCTTTTTCATAAACGGTAATTATCCGTGTTATATTCTTTACTAAATTGTAATTTAATTGTTCATTATGCGCCAATTTTGGAGGTCGCTATCTTGATTAAGAATCAAAAAAAGGG ATAGAACCCTAGGTTCAAAGCTTTTCTACACACAAATCTCTCAACTTCAAACCAAAGCTTCTTTTGTTTTCTCTTCTCTCTTTCGGAAAATATACATAAATAATGAAGACAACTCTAAGGCTATCTGGTGTTTTCATTCTTTTCTTAGTTTTATGTTTAAATCATGAGAGTATTTACGTAGAATGCCGGCATCTGAAATCATCGAAATGCAAATGCTCGAAATTGGTCTCTCCACCAGCAGTTAATCTCGGTGCGAAAAAGACCGCCACCGGGGACGTGATTTTTGCTGGAAATCGTCAACAGTTTAAGACAAGCAAAGCCGAACAGCCTCAAGACTTTCGTCCCACATCGCCCGGGCACAGTCCTGGAGTTGGCCACCATATCAACAACTGAAAAGAAGCTTCTGATGATTCTGTTATCACTGTTTAATTTCACATCCTGCATTCCGTTGTTTTCTCTCTCTGAAGGTTAAAAAAATATGCATTCCCATGTAAAGTTGTGACTTAAAGATCTATCTTTTTCATAAACGGTAATTATCCGTGTTATATTCTTTACTAAATTGTAATTTAATTGTTCATTATGCGCCAATTTTGGAGGTCGCTATCTTGATTAAGAATCAAAAAAAGGG ATGAAGACAACTCTAAGGCTATCTGGTGTTTTCATTCTTTTCTTAGTTTTATGTTTAAATCATGAGAGTATTTACGTAGAATGCCGGCATCTGAAATCATCGAAATGCAAATGCTCGAAATTGGTCTCTCCACCAGCAGTTAATCTCGGTGCGAAAAAGACCGCCACCGGGGACGTGATTTTTGCTGGAAATCGTCAACAGTTTAAGACAAGCAAAGCCGAACAGCCTCAAGACTTTCGTCCCACATCGCCCGGGCACAGTCCTGGAGTTGGCCACCATATCAACAACTGA MKTTLRLSGVFILFLVLCLNHESIYVECRHLKSSKCKCSKLVSPPAVNLGAKKTATGDVIFAGNRQQFKTSKAEQPQDFRPTSPGHSPGVGHHINN Homology
BLAST of Sed0002185 vs. NCBI nr
Match: KAG6595044.1 (hypothetical protein SDJN03_11597, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 159.5 bits (402), Expect = 1.5e-35 Identity = 79/99 (79.80%), Postives = 87/99 (87.88%), Query Frame = 0
BLAST of Sed0002185 vs. NCBI nr
Match: KAE8647497.1 (hypothetical protein Csa_004238, partial [Cucumis sativus]) HSP 1 Score: 102.1 bits (253), Expect = 2.8e-18 Identity = 61/101 (60.40%), Postives = 67/101 (66.34%), Query Frame = 0
BLAST of Sed0002185 vs. NCBI nr
Match: KAF7136307.1 (hypothetical protein RHSIM_Rhsim08G0102100 [Rhododendron simsii]) HSP 1 Score: 69.3 bits (168), Expect = 2.0e-08 Identity = 39/94 (41.49%), Postives = 56/94 (59.57%), Query Frame = 0
BLAST of Sed0002185 vs. NCBI nr
Match: KAF5736125.1 (hypothetical protein HS088_TW14G00260 [Tripterygium wilfordii]) HSP 1 Score: 67.4 bits (163), Expect = 7.7e-08 Identity = 45/89 (50.56%), Postives = 54/89 (60.67%), Query Frame = 0
BLAST of Sed0002185 vs. NCBI nr
Match: TKY55726.1 (hypothetical protein E2542_SST20145 [Spatholobus suberectus]) HSP 1 Score: 67.0 bits (162), Expect = 1.0e-07 Identity = 43/99 (43.43%), Postives = 56/99 (56.57%), Query Frame = 0
BLAST of Sed0002185 vs. ExPASy TrEMBL
Match: A0A0A0KGB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490770 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 9.1e-15 Identity = 51/86 (59.30%), Postives = 57/86 (66.28%), Query Frame = 0
BLAST of Sed0002185 vs. ExPASy TrEMBL
Match: A0A7J7CPU4 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW14G00260 PE=3 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 3.7e-08 Identity = 45/89 (50.56%), Postives = 54/89 (60.67%), Query Frame = 0
BLAST of Sed0002185 vs. ExPASy TrEMBL
Match: A0A2C9URG2 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G126300 PE=3 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 8.3e-08 Identity = 44/96 (45.83%), Postives = 53/96 (55.21%), Query Frame = 0
BLAST of Sed0002185 vs. ExPASy TrEMBL
Match: A0A061DGB8 (tRNA Delta(2)-isopentenylpyrophosphate transferase, putative OS=Theobroma cacao OX=3641 GN=TCM_000584 PE=3 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 1.4e-07 Identity = 48/94 (51.06%), Postives = 55/94 (58.51%), Query Frame = 0
BLAST of Sed0002185 vs. ExPASy TrEMBL
Match: W9R6N3 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_008270 PE=3 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 4.1e-07 Identity = 39/77 (50.65%), Postives = 50/77 (64.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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